Pregenerated sensors for PROKR1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000049409Ensembl transcript IDs: ENSMUST00000050887.9, ENSMUST00000203636.2, ENSMUST00000204682.3
Found 105 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | ATGCAAATGGCACCCAGAGTCCAAGTGGCTCCTCCCTCAAGTCGGTaGTCCAAAGAAGTCCCCTCCCCCACTGTCTGTGTGCAGAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: MQMAPRVQVAPPSSR*SKEVPSPTVCVQSP Trigger: AGGGCTCTGCACACAGACAGTGGGGGAGGGGACTTCTTTGGAGCACCGACTTGAGGGAGGAGCCACTTGGACTCTGGGTGCCATTTGCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR GCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATaGCTTCAGGGGTCCCACCTGACCCTCCCCTTCTTCACCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: QMLRDEATASFNLHA*LQGSHLTLPFFTSF Trigger: AAAGGAGGTGAAGAAGGGGAGGGTCAGGTGGGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | GAGGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTaGCAACAAGGATGCTCTGATCCTGAGACTGCAGAGCCTGGTGCT | + |
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Preference number: 1 (lower is better) Translates to: EDALILGACVGTAST*QQGCSDPETAEPGA Trigger: AGCACCAGGCTCTGCAGTCTCAGGATCAGAGCATCCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | AGGCATGAAGTCTCAAGAAGCACGAGTGGTCCAGGGCACAGATGCTaGGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: RHEVSRSTSGPGHRC*EMKQQHPLTCTHAF Trigger: GAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTGTGCCCTGGACCACTCGTGCTTCTTGAGACTTCATGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | AGACATTGTTCATGCTGGCTGGGACATGTGCGGAATGATGGCCAGTaGGGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTAC | + |
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Preference number: 1 (lower is better) Translates to: RHCSCWLGHVRNDGQ*GCSDSGCMCGNSFY Trigger: GTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCCTCACTGGCCATCATTCCGCACATGTCCCAGCCAGCATGAACAATGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR GCA 90 bp | TTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTTCATGTaGGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTC | + |
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Preference number: 1 (lower is better) Translates to: FPECPGSTPDVQVFM*AEEQKCGDFSKVTF Trigger: GAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGAAGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR GCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTaGAAGTCTTCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCT | + |
|
Preference number: 1 (lower is better) Translates to: LVIFGFLSVQAAPLM*KSSCALKSRNVVIS Trigger: AGAAATCACCACATTTCTGCTCTTCAGCGCACATGAAGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | GTAGACCATGAGTGGGGGAATCATGCTCACCTGAACTCAAACTTATaGCTCAGAACCCCAAATTCCCTATGCAAATGGCACCCAGAGTCC | + |
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Preference number: 1 (lower is better) Translates to: VDHEWGNHAHLNSNL*LRTPNSLCKWHPES Trigger: GGACTCTGGGTGCCATTTGCATAGGGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAGGTGAGCATGATTCCCCCACTCATGGTCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CCA 90 bp | GCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTaGAAAGAGCAGCAAGTCTTCATTCCCAGGACCATGACCAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: AEEQKCGDFSKVTFI*KEQQVFIPRTMTRS Trigger: TGACCTGGTCATGGTCCTGGGAATGAAGACTTGCTGCTCTTTCCAAATGAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | GTATCTCAGGTCTCCATTTCAGAAATTCCACACTTCAGTGGTCCTTaGATAGCGTGTCTAAGTAGTTGTCTCTTTCCTCTGCCTTCCGCA | + |
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Preference number: 1 (lower is better) Translates to: VSQVSISEIPHFSGP*IACLSSCLFPLPSA Trigger: TGCGGAAGGCAGAGGAAAGAGACAACTACTTAGACACGCTATTCAAGGACCACTGAAGTGTGGAATTTCTGAAATGGAGACCTGAGATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | CTCAGGTTTTCTCAGGCCAGAATTCTAAATGCCAAGCTAAGAAGGTaGGTTATCACATGGGATGAGACTTTCATAAGTCTGTGGGGTCCC | + |
|
Preference number: 1 (lower is better) Translates to: LRFSQARILNAKLRR*VITWDETFISLWGP Trigger: GGGACCCCACAGACTTATGAAAGTCTCATCCCATGTGATAACTCACCTTCTTAGCTTGGCATTTAGAATTCTGGCCTGAGAAAACCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | TACACACAGGTTAATTTAATTAATGTCTTGTCCTATAAAGAAATCTaGGGGGAGGGACCCGGCCCCTCTGCTGCTCTGCACACTCAGAAT | + |
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Preference number: 1 (lower is better) Translates to: YTQVNLINVLSYKEI*GEGPGPSAALHTQN Trigger: ATTCTGAGTGTGCAGAGCAGCAGAGGGGCCGGGTCCCTCCCCTCAGATTTCTTTATAGGACAAGACATTAATTAAATTAACCTGTGTGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | CAGAATTCTAAATGCCAAGCTAAGAAGGTGAGTTATCACATGGGATaGGACTTTCATAAGTCTGTGGGGTCCCTAGAGCTCACTGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: QNSKCQAKKVSYHMG*DFHKSVGSLELTVG Trigger: ACCAACAGTGAGCTCTAGGGACCCCACAGACTTATGAAAGTCTCATCCCATGTGATAACTCACCTTCTTAGCTTGGCATTTAGAATTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | GTACCACTTCCTTTATGTACCTGCCGTGAAAATTCTCAGTCTTATTaGTACCAATGTGCTATGATGACACAATGCAGTATTGAGAAGCAT | + |
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Preference number: 1 (lower is better) Translates to: VPLPLCTCRENSQSY*YQCAMMTQCSIEKH Trigger: ATGCTTCTCAATACTGCATTGTGTCATCATAGCACATTGGTATCAATAAGACTGAGAATTTTCACGGCAGGTACATAAAGGAAGTGGTAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR TCA 90 bp | ATGTGTACATCTACTAGTATTCCATTTGATAACAAGCATTCACTGTaGAATCACAAGGAGACACCAATATCTGGAAGAATTACAGACAGT | + |
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Preference number: 1 (lower is better) Translates to: MCTSTSIPFDNKHSL*NHKETPISGRITDS Trigger: ACTGTCTGTAATTCTTCCAGATATTGGTGTCTCCTTGTGATTTCACAGTGAATGCTTGTTATCAAATGGAATACTAGTAGATGTACACAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | CTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGGGTCCGAGTCCTGCCAGAGGTaGGCTAGGCCCACACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: LRDEATASFNLHACLQGSESCQR*ARPTQS Trigger: GCTCTGTGTGGGCCTAGCTCACCTCTGGCAGGACTC...GGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCCCTAGAGCTCACTGTTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCCTCAAGAAGCACGAGTaGTCCAGGGCACAGATGCTG | + |
|
Preference number: 2 (lower is better) Translates to: VGSLELTVGHLRFPECPGLKKHE*SRAQML Trigger: CAGCATCTGTGCCCTGGACCACTCGTGCTTCTTGAG...GCCTGGACACTCAGGAAACCGAAGATGACCAACAGTGAGCTCTAGGGACCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGAGTCCTGCCAGAGGTaGGCTAGGCCCACACAGAGC | + |
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Preference number: 2 (lower is better) Translates to: QMLRDEATASFNLHACLQESCQR*ARPTQS Trigger: GCTCTGTGTGGGCCTAGCTCACCTCTGGCAGGACTC...CTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCCCTAGAGCTCACTGTTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGAAAAACAAGTTCATaGCTGCTGTGTGCACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: VGSLELTVGHLRFPECPGRKTSS*LLCAPG Trigger: CCCGGGTGCACACAGCAGCCATGAACTTGTTTTTCT...GCCTGGACACTCAGGAAACCGAAGATGACCAACAGTGAGCTCTAGGGACCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GTTGCTGTTGCTGCTGGTGGTGGTGGAGATGGTGGTGGTGGTGGTGGTGATGGTAATTCCCTATGCAAATaGCACCCAGAGTCCAAGTGG | + |
|
Preference number: 2 (lower is better) Translates to: VAVAAGGGGDGGGGGGDGNSLCK*HPESKW Trigger: CCACTTGGACTCTGGGTGCCATTTGCATAGGGAATT...ACCATCACCACCACCACCACCACCATCTCCACCACCACCAGCAGCAACAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | GTTGCTGTTGCTGCTGGTGGTGGTGGAGATGGTGGTGGTGGTGGTGGTGATGGTATAAACTCAGAGGCATaGAGTCTCAAGAAGCACGAG | + |
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Preference number: 2 (lower is better) Translates to: VAVAAGGGGDGGGGGGDGINSEA*SLKKHE Trigger: CTCGTGCTTCTTGAGACTTCATGCCTCTGAGTTTAT...ACCATCACCACCACCACCACCACCATCTCCACCACCACCAGCAGCAACAGCAAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGCTTAGCCGTGGGTCCTaGAGTGTCCACTCATGCTTC | + |
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Preference number: 2 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRLSRGS*SVHSCF Trigger: GAAGCATGAGTGGACACTCCAGGACCCACGGCTAAG...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGTCCCTAGAGCTCACTGTTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAATTCCCTATGCAAATaGCACCCAGAGTCCAAGTGG | + |
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Preference number: 2 (lower is better) Translates to: VGSLELTVGHLRFPECPGNSLCK*HPESKW Trigger: CCACTTGGACTCTGGGTGCCATTTGCATAGGGAATT...GCCTGGACACTCAGGAAACCGAAGATGACCAACAGTGAGCTCTAGGGACCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | CTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGGGTCCGAGTCCTACATAGCCTaGTCTGCCTTCTCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LRDEATASFNLHACLQGSESYIA*SAFSLE Trigger: TTCCAGAGAGAAGGCAGAGCAGGCTATGTAGGACTC...GGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | AGAGGCATGAAGTCTCAAGAAGCACGAGTGGTCCAGGGCACAGATGCTGAGAGAACCCCAAATTCCCTATaGAAATGGCACCCAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: RGMKSQEARVVQGTDAERTPNSL*KWHPES Trigger: GGACTCTGGGTGCCATTTGCATAGGGAATTTGGGGT...TCTCTCAGCATCTGTGCCCTGGACCACTCGTGCTTCTTGAGACTTCATGCCTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | GTTGCTGTTGCTGCTGGTGGTGGTGGAGATGGTGGTGGTGGTGGTGGTGATGGTACCTTCATGAGTCTATaGTCCATAAACTCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: VAVAAGGGGDGGGGGGDGTFMSL*SINSEA Trigger: TGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGT...ACCATCACCACCACCACCACCACCATCTCCACCACCACCAGCAGCAACAGCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | CGGTGCTCCAAAGAAGTCCCCTCCCCCACTGTCTGTGTGCAGAGCCCTAGGCCTCAATCCATATTTCCTTaGTATAATCCCCACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: RCSKEVPSPTVCVQSPRPQSIFP*YNPHFT Trigger: AGTAAAGTGGGGATTATAGCAAGGAAATATGGATTG...AGGCCTAGGGCTCTGCACACAGACAGTGGGGGAGGGGACTTCTTTGGAGCACCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 90 bp | ACAAGTTTGTCTTTGTCCAGTCACTCCATAGTTGCTAGTTCACTGTaGTTGCTGTTGCTGCTGGTGGTGGTGGAGATGGTGGTGGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: TSLSLSSHSIVASSL*LLLLLVVVEMVVVV Trigger: CACCACCACCACCATCTCCACCACCACCAGCAGCAACAGCAACAACAGTGAACTAGCAACTATGGAGTGACTGGACAAAGACAAACTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | TCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTCCTTTTCCCCTGCAGTaGGTAGACCATGAGTGGGGG | + |
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Preference number: 2 (lower is better) Translates to: SCALKSRNVVISPRSPSFPFPLQ*VDHEWG Trigger: CCCCCACTCATGGTCTACTCACTGCAGGGGAAAAGG...AAATGAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGCTACATAGCCTGCTCTaGCTTCTCTCTGGAAATAGC | + |
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Preference number: 2 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRLHSLL*LLSGNS Trigger: GCTATTTCCAGAGAGAAGGCAGAGCAGGCTATGTAG...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGACCCCAAATTCCCTATaGAAATGGCACCCAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: QMLRDEATASFNLHACLQTPNSL*KWHPES Trigger: GGACTCTGGGTGCCATTTGCATAGGGAATTTGGGGT...CTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 90 bp | GACTACAGCACATCTGGGAACCTCTTCCATACTCTTGCTCCGGGCTaGCTAATGCTAGACATAAACAAAAACCCAAGAGTCCTGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: DYSTSGNLFHTLAPG*LMLDINKNPRVLPE Trigger: CTCTGGCAGGACTCTTGGGTTTTTGTTTATGTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGTGCTGTAGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTCTGAACTCAAACTTATaGCTCAGAACCCCAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSLNSNL*LRTPNS Trigger: GGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAG...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGGTTGTCTCTTTCCTCTaGCTTCCGCAGAAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRVVSFL*LPQKNK Trigger: CTTGTTTTTCTGCGGAAGGCAGAGGAAAGAGACAAC...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTAGAGTCAGGTACCACTaGTTAAGAAATCTTTCTCCC | + |
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Preference number: 2 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSRVRYH*LRNLSP Trigger: GGGAGAAAGATTTCTTAACCAGTGGTACCTGACTCT...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | TCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTCCAGGGCACAGATGCTaGGAGATGAAGCAACAGCAT | + |
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Preference number: 2 (lower is better) Translates to: SCALKSRNVVISPRSPSFPGHRC*EMKQQH Trigger: ATGCTGTTGCTTCATCTCTCAGCATCTGTGCCCTGG...AAATGAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGTTGTCTCTTTCCTCTaGCTTCCGCAGAAAAACAAG | + |
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Preference number: 2 (lower is better) Translates to: QMLRDEATASFNLHACLQVVSFL*LPQKNK Trigger: CTTGTTTTTCTGCGGAAGGCAGAGGAAAGAGACAAC...CTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GCAAGGTGCTACGTTTACCTTCATGAGTCTATGCTCCATAAACTCAGAGGCATGAGAAAAACAAGTTCATaGCTGCTGTGTGCACCCGGG | + |
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Preference number: 2 (lower is better) Translates to: ARCYVYLHESMLHKLRGMRKTSS*LLCAPG Trigger: CCCGGGTGCACACAGCAGCCATGAACTTGTTTTTCT...CATGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGTAAACGTAGCACCTTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | GATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGGGTCCCACCTGTCAAAGGACTTTCACTaGTGTCTAGTCTTTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: DEATASFNLHACLQGSHLSKDFH*CLVFAK Trigger: TTTTGCAAAGACTAGACACCAGTGAAAGTCCTTTGA...CAGGTGGGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR CCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTTCAAAGGACTTTCACTaGTGTCTAGTCTTTGCAAAA | + |
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Preference number: 2 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSSKDFH*CLVFAK Trigger: TTTTGCAAAGACTAGACACCAGTGAAAGTCCTTTGA...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR TCA 90 bp | GCAAGGTGCTACGTTTACCTTCATGAGTCTATGCTCCATAAACTCAGAGGCATGCTGAACTCAAACTTATaGCTCAGAACCCCAAATTCC | + |
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Preference number: 2 (lower is better) Translates to: ARCYVYLHESMLHKLRGMLNSNL*LRTPNS Trigger: GGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAG...CATGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGTAAACGTAGCACCTTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | AAGTCTTCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTACCTTCATGAGTCTATaGTCCATAAACTCAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: KSSCALKSRNVVISPRSPTFMSL*SINSEA Trigger: TGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGT...AGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGAAGACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR-3UTR GCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGCAATCCATATTTCCTTaGTATAATCCCCACTTTACT | + |
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Preference number: 2 (lower is better) Translates to: QMLRDEATASFNLHACLQQSIFP*YNPHFT Trigger: AGTAAAGTGGGGATTATAGCAAGGAAATATGGATTG...CTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 90 bp | CAGACACTCCAATCCATATTTCCTTGCTATAATCCCCACTTTACTTaGTCAAAGGACTTTCACTGGTGTCTAGTCTTTGCAAAAATTAGA | + |
|
Preference number: 2 (lower is better) Translates to: QTLQSIFPCYNPHFT*SKDFHWCLVFAKIR Trigger: TCTAATTTTTGCAAAGACTAGACACCAGTGAAAGTCCTTTGACAAAGTAAAGTGGGGATTATAGCAAGGAAATATGGATTGGAGTGTCTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | GCACCCAGAGTCCAAGTGGCTCCTCCCTCAAGTCGGTaGTCCAAAGAAGTCCCCTCCCCCACTGTCTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: APRVQVAPPSSR*SKEVPSPTVCV Trigger: CACACAGACAGTGGGGGAGGGGACTTCTTTGGAGCACCGACTTGAGGGAGGAGCCACTTGGACTCTGGGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | TCATGCTGGCTGGGACATGTGCGGAATGATGGCCAGTaGGGATGCTCTGATTCTGGGTGCATGTGTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: SCWLGHVRNDGQ*GCSDSGCMCGN Trigger: GTTCCCACACATGCACCCAGAATCAGAGCATCCTCACTGGCCATCATTCCGCACATGTCCCAGCCAGCATGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | AGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATaGCTTCAGGGGTCCCACCTGACCCTCCCCTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: RDEATASFNLHA*LQGSHLTLPFF Trigger: GAAGAAGGGGAGGGTCAGGTGGGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | TTTCCTCTGCCTTCCGCAGAAAAACAAGTTCATGGCTaGTGTGTGCACCCGGGCGCTGTGGTACCATTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: FPLPSAEKQVHG*CVHPGAVVPFC Trigger: GCAAAATGGTACCACAGCGCCCGGGTGCACACAGCAGCCATGAACTTGTTTTTCTGCGGAAGGCAGAGGAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | CAGCTGGGAGACATTGTTCATGCTGGCTGGGACATGTaGGGAATGATGGCCAGTGAGGATGCTCTGATTCTG | + |
|
Preference number: 3 (lower is better) Translates to: QLGDIVHAGWDM*GMMASEDALIL Trigger: CAGAATCAGAGCATCCTCACTGGCCATCATTCCGCACATGTCCCAGCCAGCATGAACAATGTCTCCCAGCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CCA 72 bp | TCTCTTTCCTCTGCCTTCCGCAGAAAAACAAGTTCATaGCTGCTGTGTGCACCCGGGCGCTGTGGTACCATT | + |
|
Preference number: 3 (lower is better) Translates to: SLSSAFRRKTSS*LLCAPGRCGTI Trigger: AATGGTACCACAGCGCCCGGGTGCACACAGCAGCCATGAACTTGTTTTTCTGCGGAAGGCAGAGGAAAGAGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CCA 72 bp | CCAAATTCCCTATGCAAATGGCACCCAGAGTCCAAGTaGCTCCTCCCTCAAGTCGGTGCTCCAAAGAAGTCC | + |
|
Preference number: 3 (lower is better) Translates to: PNSLCKWHPESK*LLPQVGAPKKS Trigger: GGACTTCTTTGGAGCACCGACTTGAGGGAGGAGCCACTTGGACTCTGGGTGCCATTTGCATAGGGAATTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CCA 72 bp | CCCTCTGCTGCTCTGCACACTCAGAATAAAAGCAGCTaGGAGACATTGTTCATGCTGGCTGGGACATGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: PSAALHTQNKSS*ETLFMLAGTCA Trigger: CGCACATGTCCCAGCCAGCATGAACAATGTCTCCCAGCTGCTTTTATTCTGAGTGTGCAGAGCAGCAGAGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | CCAGTTAGGGAATCCCATCAAATAGGCTGCCTGAGATaGAAACACCGGTGTTTGGGAGCTAGTGGGAACGGG | + |
|
Preference number: 3 (lower is better) Translates to: PVRESHQIGCLR*KHRCLGASGNG Trigger: CCCGTTCCCACTAGCTCCCAAACACCGGTGTTTTCATCTCAGGCAGCCTATTTGATGGGATTCCCTAACTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | TTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTaGAAGTCTTCATGTGCGCTGAAGAGCAGAAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: FGFLSVQAAPLM*KSSCALKSRNV Trigger: CACATTTCTGCTCTTCAGCGCACATGAAGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | CTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTaGCAACAAGGATGCTCTGATCCTGAGACTGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LILGACVGTAST*QQGCSDPETAE Trigger: CTCTGCAGTCTCAGGATCAGAGCATCCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | TGTCCAGGCAGCACCCCTGATGTGCAAGTCTTCATGTaGGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAG | + |
|
Preference number: 3 (lower is better) Translates to: CPGSTPDVQVFM*AEEQKCGDFSK Trigger: CTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGAAGACTTGCACATCAGGGGTGCTGCCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | CTAAGCACAGACAGGAGAGTCCTACATAGCCTGCTCTaGCTTCTCTCTGGAAATAGCCTTTTCCAGACACTC | + |
|
Preference number: 3 (lower is better) Translates to: LSTDRRVLHSLL*LLSGNSLFQTL Trigger: GAGTGTCTGGAAAAGGCTATTTCCAGAGAGAAGGCAGAGCAGGCTATGTAGGACTCTCCTGTCTGTGCTTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CCA 72 bp | GATTCTGAGGTAAGCAGAAAAGGACTACAGCACATCTaGGAACCTCTTCCATACTCTTGCTCCGGGCTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DSEVSRKGLQHI*EPLPYSCSGLA Trigger: AGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGTGCTGTAGTCCTTTTCTGCTTACCTCAGAATC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | GAGTGGGGGAATCATGCTCACCTGAACTCAAACTTATaGCTCAGAACCCCAAATTCCCTATGCAAATGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: EWGNHAHLNSNL*LRTPNSLCKWH Trigger: GTGCCATTTGCATAGGGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAGGTGAGCATGATTCCCCCACTC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | AAATGCCAAGCTAAGAAGGTGAGTTATCACATGGGATaGGACTTTCATAAGTCTGTGGGGTCCCTAGAGCTC | + |
|
Preference number: 3 (lower is better) Translates to: KCQAKKVSYHMG*DFHKSVGSLEL Trigger: GAGCTCTAGGGACCCCACAGACTTATGAAAGTCTCATCCCATGTGATAACTCACCTTCTTAGCTTGGCATTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR GCA 72 bp | GGACTACAGCACATCTGGGAACCTCTTCCATACTCTTaGTCCGGGCTTGCTAATGCTAGACATAAACAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: GLQHIWEPLPYS*SGLANARHKQK Trigger: TTTTTGTTTATGTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGTGCTGTAGTCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CCA 72 bp | CAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTaGAAAGAGCAGCAAGTCTTCATTCCCAGGACCATG | + |
|
Preference number: 3 (lower is better) Translates to: QKCGDFSKVTFI*KEQQVFIPRTM Trigger: CATGGTCCTGGGAATGAAGACTTGCTGCTCTTTCCAAATGAAGGTGACCTTGGAGAAATCACCACATTTCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | GTCTCCATTTCAGAAATTCCACACTTCAGTGGTCCTTaGATAGCGTGTCTAAGTAGTTGTCTCTTTCCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: VSISEIPHFSGP*IACLSSCLFPL Trigger: CAGAGGAAAGAGACAACTACTTAGACACGCTATTCAAGGACCACTGAAGTGTGGAATTTCTGAAATGGAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | TCTCAGGCCAGAATTCTAAATGCCAAGCTAAGAAGGTaGGTTATCACATGGGATGAGACTTTCATAAGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SQARILNAKLRR*VITWDETFISL Trigger: CAGACTTATGAAAGTCTCATCCCATGTGATAACTCACCTTCTTAGCTTGGCATTTAGAATTCTGGCCTGAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | TGGAGACTGGGTACCACTTCCTTTATGTACCTGCCGTaGAAATTCTCAGTCTTATTGATACCAATGTGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: WRLGTTSFMYLP*KFSVLLIPMCY Trigger: ATAGCACATTGGTATCAATAAGACTGAGAATTTTCACGGCAGGTACATAAAGGAAGTGGTACCCAGTCTCCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR TCA 72 bp | CCTTTATGTACCTGCCGTGAAAATTCTCAGTCTTATTaGTACCAATGTGCTATGATGACACAATGCAGTATT | + |
|
Preference number: 3 (lower is better) Translates to: PLCTCRENSQSY*YQCAMMTQCSI Trigger: AATACTGCATTGTGTCATCATAGCACATTGGTATCAATAAGACTGAGAATTTTCACGGCAGGTACATAAAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTCCAAAGAAGTCCCCTCCCCCACTGTCTGTGTGCAGAGCCCTAGGCCTCGGATCTGCTCTGTCTaGAAGCCTGGCACCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RCSKEVPSPTVCVQSPRPRICSV*KPGTAL Trigger: CAAGGCGGTGCCAGGCTTCCAGACAGAGCAGATCCG...AGGCCTAGGGCTCTGCACACAGACAGTGGGGGAGGGGACTTCTTTGGAGCACCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | AACTTAGCCGTGGGTCCTGGAGTGTCCACTCATGCTTCTGATTCCCCTCAGTGGAGGCCGGCGGCTGTTTaGCACTTCATCCGCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLAVGPGVSTHASDSPQWRPAAV*HFIRGL Trigger: GAGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCT...CCACTGAGGGGAATCAGAAGCATGAGTGGACACTCCAGGACCCACGGCTAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | AAATGGCACCCAGAGTCCAAGTGGCTCCTCCCTCAAGTCGGTGCTCCAAAGAAGAGGCCGGCGGCTGTTTaGCACTTCATCCGCGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KWHPESKWLLPQVGAPKKRPAAV*HFIRGL Trigger: GAGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCT...CTTCTTTGGAGCACCGACTTGAGGGAGGAGCCACTTGGACTCTGGGTGCCATTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR GCA 90 bp | AACTTAGCCGTGGGTCCTGGAGTGTCCACTCATGCTTCTGATTCCCCTCAGTGGAGCCTCCGGCGGATCTaGTCTGTCTGGAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NLAVGPGVSTHASDSPQWSLRRI*SVWKPG Trigger: GCCAGGCTTCCAGACAGAGCAGATCCGCCGGAGGCT...CCACTGAGGGGAATCAGAAGCATGAGTGGACACTCCAGGACCCACGGCTAAGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | CGGTGCTCCAAAGAAGTCCCCTCCCCCACTGTCTGTGTGCAGAGCCCTAGGCCTCCGGTTTGGGCTTCATaGCCATCGAGTGCAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RCSKEVPSPTVCVQSPRPPVWAS*PSSAEK Trigger: CTTTTCTGCACTCGATGGCCATGAAGCCCAAACCGG...AGGCCTAGGGCTCTGCACACAGACAGTGGGGGAGGGGACTTCTTTGGAGCACCG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | AAATGGCACCCAGAGTCCAAGTGGCTCCTCCCTCAAGTCGGTGCTCCAAAGAAGCGGATCTGCTCTGTCTaGAAGCCTGGCACCGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KWHPESKWLLPQVGAPKKRICSV*KPGTAL Trigger: CAAGGCGGTGCCAGGCTTCCAGACAGAGCAGATCCG...CTTCTTTGGAGCACCGACTTGAGGGAGGAGCCACTTGGACTCTGGGTGCCATTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | AGCACATCTGGGAACCTCTTCCATACTCTTGCTCCGGGCTTGCTAATGCTAGACTGGCCTTGCTCCCGCTaGGAGAGGCCCTCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: STSGNLFHTLAPGLLMLDWPCSR*ERPSTE Trigger: TTCAGTGGAGGGCCTCTCCCAGCGGGAGCAAGGCCA...GTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | AACTTAGCCGTGGGTCCTGGAGTGTCCACTCATGCTTCTGATTCCCCTCAGTGGAGGGGCAGCACACGATaGCCACGAGGAAGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NLAVGPGVSTHASDSPQWRGSTR*PRGSLK Trigger: TTTCAGACTTCCTCGTGGCCATCGTGTGCTGCCCCT...CCACTGAGGGGAATCAGAAGCATGAGTGGACACTCCAGGACCCACGGCTAAGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTCATAGCACAAGGTCATaGCGACTACAGGGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSHSTRS*RLQGPR Trigger: TCGTGGGCCCTGTAGTCGCCATGACCTTGTGCTATG...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTCCACATAGAAGGCGGTaGGGTAGTGCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSPHRRR*GSASPS Trigger: TGAAGGAGAAGCACTACCTCACCGCCTTCTATGTGG...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGAGGGGCAGCACACGATaGCCACGAGGAAGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRRGSTR*PRGSLK Trigger: TTTCAGACTTCCTCGTGGCCATCGTGTGCTGCCCCT...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | TTGGTCATCTTCGGTTTCCTGAGTGTCCAGGCAGCACCCCTGATGTGCAAGTCTTCAGCGGGTGCACAATaGCCAGATACCTGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: LVIFGFLSVQAAPLMCKSSAGAQ*PDTCQW Trigger: CCATTGACAGGTATCTGGCCATTGTGCACCCGCTGA...AGACTTGCACATCAGGGGTGCTGCCTGGACACTCAGGAAACCGAAGATGACCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGCATAGCACAAGGTCATaGCGACTACAGGGCCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRHSTRS*RLQGPR Trigger: TCGTGGGCCCTGTAGTCGCCATGACCTTGTGCTATG...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| 3UTR CAA 72 bp | AGTCACTCCATAGTTGCTAGTTCACTGTTGTTGCTGTaGCTGCTGGTGGTGGTGGAGATGGTGGTGGTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHSIVASSLLLL*LLVVVEMVVVV Trigger: CACCACCACCACCATCTCCACCACCACCAGCAGCAACAGCAACAACAGTGAACTAGCAACTATGGAGTGACT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGCCACATAGAAGGCGGTaGGGTAGTGCTTCTCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRPHRRR*GSASPS Trigger: TGAAGGAGAAGCACTACCTCACCGCCTTCTATGTGG...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | CTCTTTCCTCTGCCTTCCGCAGAAAAACAAGTTCATGGCTGCTGTGTGCACCCGGCCGCAGGATCCTCTTaGGGTACTTACTGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LFPLPSAEKQVHGCCVHPAAGSS*GTYWCY Trigger: ATAACACCAGTAAGTACCTCAAGAGGATCCTGCGGC...CGGGTGCACACAGCAGCCATGAACTTGTTTTTCTGCGGAAGGCAGAGGAAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGGGTCCGCCGCAGGATCCTCTTaGGGTACTTACTGGTGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: LRDEATASFNLHACLQGSAAGSS*GTYWCY Trigger: ATAACACCAGTAAGTACCTCAAGAGGATCCTGCGGC...GGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | GGATGCTCTGATTCTGGGTGCATGTGTGGGAACAGCTTCTACCTGACAACAAGGCCGGTTTGGGCTTCATaGCCATCGAGTGCAGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSDSGCMCGNSFYLTTRPVWAS*PSSAEK Trigger: CTTTTCTGCACTCGATGGCCATGAAGCCCAAACCGG...CCTTGTTGTCAGGTAGAAGCTGTTCCCACACATGCACCCAGAATCAGAGCATCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR GCA 90 bp | TCACCTGAACTCAAACTTATGACTCAGAACCCCAAATTCCCTATGCAAATGGCAAGCCTCCGGCGGATCTaGTCTGTCTGGAAGCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SPELKLMTQNPKFPMQMASLRRI*SVWKPG Trigger: GCCAGGCTTCCAGACAGAGCAGATCCGCCGGAGGCT...TGCCATTTGCATAGGGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | TCACCTGAACTCAAACTTATGACTCAGAACCCCAAATTCCCTATGCAAATGGCATGGCCTTGCTCCCGCTaGGAGAGGCCCTCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: SPELKLMTQNPKFPMQMAWPCSR*ERPSTE Trigger: TTCAGTGGAGGGCCTCTCCCAGCGGGAGCAAGGCCA...TGCCATTTGCATAGGGAATTTGGGGTTCTGAGTCATAAGTTTGAGTTCAGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | CTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGGGGTCCCAGAAAAGAAGTCGGTaGAGGTGTCTGTGGTATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRDEATASFNLHACLQGSQKRSR*RCLWYS Trigger: AGAATACCACAGACACCTTCACCGACTTCTTTTCTG...GGACCCCTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR TCA 90 bp | CAGATGCTGAGAGATGAAGCAACAGCATCCTTTAACCTGCACGCATGCCTTCAGTACTGGTGTTATTCCTaGCAGTCACAAAGCAGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QMLRDEATASFNLHACLQYWCYS*QSQSRA Trigger: CGCTCTGCTTTGTGACTGTCAGGAATAACACCAGTA...CTGAAGGCATGCGTGCAGGTTAAAGGATGCTGTTGCTTCATCTCTCAGCATCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | GCAAGGTGCTACGTTTACCTTCATGAGTCTATGCTCCATAAACTCAGAGGCATGTCAGCGGGTGCACAATaGCCAGATACCTGTCAATGG | + |
|
Preference number: 4 (lower is better) Translates to: ARCYVYLHESMLHKLRGMSAGAQ*PDTCQW Trigger: CCATTGACAGGTATCTGGCCATTGTGCACCCGCTGA...CATGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGTAAACGTAGCACCTTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
||
| CDS-3UTR CCA 90 bp | AAGTCTTCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTGGTGAAGTAGGCAGCTaGAATGGCGATGAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: KSSCALKSRNVVISPRSPGEVGS*NGDEDG Trigger: TCCATCCTCATCGCCATTCCAGCTGCCTACTTCACC...AGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGAAGACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS-3UTR CCA 90 bp | TCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTGGTGAAGTAGGCAGCTaGAATGGCGATGAGGATGGA | + |
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Preference number: 4 (lower is better) Translates to: SCALKSRNVVISPRSPSFGEVGS*NGDEDG Trigger: TCCATCCTCATCGCCATTCCAGCTGCCTACTTCACC...AAATGAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS-3UTR CCA 90 bp | AGCACATCTGGGAACCTCTTCCATACTCTTGCTCCGGGCTTGCTAATGCTAGACAGAAAGTCCGAGAATTaGTCACATCTTCCTCTTCAT | + |
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Preference number: 4 (lower is better) Translates to: STSGNLFHTLAPGLLMLDRKSEN*SHLPLH Trigger: ATGAAGAGGAAGATGTGACCAATTCTCGGACTTTCT...GTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 72 bp | ACATCTGGGAACCTCTTCCATACTCTTGCTCCGGGCTaGCTAATGCTAGACATAAACAAAAACCCAAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: TSGNLFHTLAPG*LMLDINKNPRV Trigger: GACTCTTGGGTTTTTGTTTATGTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTTCCCAGATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS-3UTR TCA 90 bp | AACCTCTTCCATACTCTTGCTCCGGGCTTGCTAATGCTAGACATAAACAAAAACTACTGGTGTTATTCCTaGCAGTCACAAAGCAGAGCG | + |
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Preference number: 4 (lower is better) Translates to: NLFHTLAPGLLMLDINKNYWCYS*QSQSRA Trigger: CGCTCTGCTTTGTGACTGTCAGGAATAACACCAGTA...GTTTTTGTTTATGTCTAGCATTAGCAAGCCCGGAGCAAGAGTATGGAAGAGGTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 72 bp | CAGAGTCATAAACAGAATATATGTACAAGTTTGTCTTaGTCCAGTCACTCCATAGTTGCTAGTTCACTGTTG | + |
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Preference number: 4 (lower is better) Translates to: QSHKQNICTSLS*SSHSIVASSLL Trigger: CAACAGTGAACTAGCAACTATGGAGTGACTGGACAAAGACAAACTTGTACATATATTCTGTTTATGACTCTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| 3UTR CAA 72 bp | ATCCAGATAGTTAACAGCTTATCTTCCACAGATTATTaGATTGACCTCCCAACAATTCTAACAAGGTTTCTT | + |
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Preference number: 4 (lower is better) Translates to: IQIVNSLSSTDY*IDLPTILTRFL Trigger: AAGAAACCTTGTTAGAATTGTTGGGAGGTCAATCAAATAATCTGTGGAAGATAAGCTGTTAACTATCTGGAT 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 90 bp | AGGATGGATACTGACCACACCAGGAAGATCAGGCCGGCGGCTGTTTaGCACTTCATCCGCGGTCTCAGCGGGTGCACAATGGCCAGATAC | + |
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Preference number: 5 (lower is better) Translates to: RMDTDHTRKIRPAAV*HFIRGLSGCTMARY Trigger: GTATCTGGCCATTGTGCACCCGCTGAGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCTGATCTTCCTGGTGTGGTCAGTATCCATCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 90 bp | AGCCGGTTTGGGCTTCATGGCCATCGAGTGCAGAAAAGAAGTCGGTaGAGGTGTCTGTGGTATTCTCACCCAGAGCCCCGACAGTGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRFGLHGHRVQKRSR*RCLWYSHPEPRQWS Trigger: AGACCACTGTCGGGGCTCTGGGTGAGAATACCACAGACACCTTCACCGACTTCTTTTCTGCACTCGATGGCCATGAAGCCCAAACCGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050887.9 ENSMUST00000203636.2 ENSMUST00000204682.3 |
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| CDS TCA 90 bp | CTCAGTGGTGAAGTAGGCAGCTGGAATGGCGATGAGGATGGATACTaGCCACACCAGGAAGATCAGGCCGGCGGCTGTTTGACACTTCAT | + |
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Preference number: 5 (lower is better) Translates to: LSGEVGSWNGDEDGY*PHQEDQAGGCLTLH Trigger: ATGAAGTGTCAAACAGCCGCCGGCCTGATCTTCCTGGTGTGGTCAGTATCCATCCTCATCGCCATTCCAGCTGCCTACTTCACCACTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS-3UTR CAA 90 bp | GCAAGGTGCTACGTTTACCTTCATGAGTCTATGCTCCATAAACTCAGAGGCATGCAGGCCGGCGGCTGTTaGACACTTCATCCGCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: ARCYVYLHESMLHKLRGMQAGGC*TLHPRS Trigger: AGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCTG...CATGCCTCTGAGTTTATGGAGCATAGACTCATGAAGGTAAACGTAGCACCTTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS-3UTR CAA 90 bp | TCATGTGCGCTGAAGAGCAGAAATGTGGTGATTTCTCCAAGGTCACCTTCATTTCAGGCCGGCGGCTGTTaGACACTTCATCCGCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SCALKSRNVVISPRSPSFQAGGC*TLHPRS Trigger: AGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCTG...AAATGAAGGTGACCTTGGAGAAATCACCACATTTCTGCTCTTCAGCGCACATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 72 bp | AGTCCACCTCCTCGGTGGCAGGTATTCCCGTGGTCCTaGGGTCGAGGTCAGCGCTGGCCTTGCTCCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: SPPPRWQVFPWS*GRGQRWPCSRW Trigger: CCAGCGGGAGCAAGGCCAGCGCTGACCTCGACCTCAGGACCACGGGAATACCTGCCACCGAGGAGGTGGACT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 72 bp | ACTGACCACACCAGGAAGATCAGGCCGGCGGCTGTTTaGCACTTCATCCGCGGTCTCAGCGGGTGCACAATG | + |
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Preference number: 6 (lower is better) Translates to: TDHTRKIRPAAV*HFIRGLSGCTM Trigger: CATTGTGCACCCGCTGAGACCGCGGATGAAGTGTCAAACAGCCGCCGGCCTGATCTTCCTGGTGTGGTCAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 72 bp | GAAGTAGGCAGCTGGAATGGCGATGAGGATGGATACTaGCCACACCAGGAAGATCAGGCCGGCGGCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: EVGSWNGDEDGY*PHQEDQAGGCL Trigger: CAAACAGCCGCCGGCCTGATCTTCCTGGTGTGGTCAGTATCCATCCTCATCGCCATTCCAGCTGCCTACTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050887.9 ENSMUST00000204682.3 |
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| CDS TCA 72 bp | GGGCTTCATGGCCATCGAGTGCAGAAAAGAAGTCGGTaGAGGTGTCTGTGGTATTCTCACCCAGAGCCCCGA | + |
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Preference number: 6 (lower is better) Translates to: GLHGHRVQKRSR*RCLWYSHPEPR Trigger: TCGGGGCTCTGGGTGAGAATACCACAGACACCTTCACCGACTTCTTTTCTGCACTCGATGGCCATGAAGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050887.9 ENSMUST00000203636.2 ENSMUST00000204682.3 |
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