Pregenerated sensors for PRODH2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036892Ensembl transcript IDs: ENSMUST00000058280.13, ENSMUST00000122876.2, ENSMUST00000130839.8, ENSMUST00000131040.2, ENSMUST00000133318.8, ENSMUST00000142575.8
Found 130 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCGAGCAGACACCAGGGTCAGCCCTTTCCCCAAGGAGGCAGCTTCTaGGAAGTACAGACAGGGCCAGGACTCGGGACCTTTATTGAGCAC | + |
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Preference number: 1 (lower is better) Translates to: PSRHQGQPFPQGGSF*EVQTGPGLGTFIEH Trigger: GTGCTCAATAAAGGTCCCGAGTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGACCCTGGTGTCTGCTCGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR TCA 90 bp | GCTAGGATAACAGGAGTGTGCCACCACACAGGACTAAAGATCTCTTaGGTCTCAGGCATGCCCCACCTGTCCGAGCAGACACCAGGGTCA | + |
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Preference number: 1 (lower is better) Translates to: ARITGVCHHTGLKIS*VSGMPHLSEQTPGS Trigger: TGACCCTGGTGTCTGCTCGGACAGGTGGGGCATGCCTGAGACTCAAGAGATCTTTAGTCCTGTGTGGTGGCACACTCCTGTTATCCTAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR-3UTR TCA 90 bp | CACACCCACGGACCACCTTCCTCAGGGCTGTTCCAGCGCACAGCCAGGGCAGCCCTCGGTGCAAGCGGCTaGGGGAGGCCTGCAGGTGCT | + |
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Preference number: 2 (lower is better) Translates to: HTHGPPSSGLFQRTARAALGASG*GRPAGA Trigger: AGCACCTGCAGGCCTCCCTCAGCCGCTTGCACCGAG...GGCTGCCCTGGCTGTGCGCTGGAACAGCCCTGAGGAAGGTGGTCCGTGGGTGTG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCACGGACCACCTTCCTCAGGGCTGTTCCAGCGCACAGCCAGGGCAGCCACGAGGCCTGCAGGTGCTaGTTCTGTTCTGTGCTGAGG | + |
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Preference number: 2 (lower is better) Translates to: HPRTTFLRAVPAHSQGSHEACRC*FCSVLR Trigger: CCTCAGCACAGAACAGAATCAGCACCTGCAGGCCTC...GTGGCTGCCCTGGCTGTGCGCTGGAACAGCCCTGAGGAAGGTGGTCCGTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR-3UTR CCA 90 bp | CATCTACCAGCAGCCGCACACACTTCGCCCGGGCGTGCTGTGCCACTCGGTGCATCCGACCCGAGTCCATaGCTTCTGCCAGCCTCTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLPAAAHTSPGRAVPLGASDPSP*LLPASQ Trigger: CTGAGAGGCTGGCAGAAGCCATGGACTCGGGTCGGA...TGCACCGAGTGGCACAGCACGCCCGGGCGAAGTGTGTGCGGCTGCTGGTAGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCGTAGTGCCTGCTCCCTaGGGGCACCCTGCAGCACAC | + |
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Preference number: 2 (lower is better) Translates to: GADGDILGRPSQQSPPQFVVPAP*GHPAAH Trigger: GTGTGCTGCAGGGTGCCCGCAGGGAGCAGGCACTAC...GAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCTGGCTGAGTAGTGCCTaGTCCCTGCGGGCACCCTGC | + |
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Preference number: 2 (lower is better) Translates to: GADGDILGRPSQQSPPQFWLSSA*SLRAPC Trigger: GCAGGGTGCCCGCAGGGAGCAGGCACTACTCAGCCA...GAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR-3UTR GCA 90 bp | GATGGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTCCCTGCGGGCACCCTaGAGCACACTCCTGTTCTCC | + |
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Preference number: 2 (lower is better) Translates to: DGADGDILGRPSQQSPPQSLRAP*STLLFS Trigger: GGAGAACAGGAGTGTGCTGCAGGGTGCCCGCAGGGA...CTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACCATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR-3UTR TCA 90 bp | TATTCAGCATCTACCAGCAGCCGCACACACTTCGCCCGGGCGTGCTGTGCCACTGATTCTGTTCTGTGCTaGGGCAGGAGAGCTGGAGGT | + |
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Preference number: 2 (lower is better) Translates to: YSASTSSRTHFARACCATDSVLC*GRRAGG Trigger: ACCTCCAGCTCTCCTGCCTCAGCACAGAACAGAATC...AGTGGCACAGCACGCCCGGGCGAAGTGTGTGCGGCTGCTGGTAGATGCTGAATA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR-3UTR CCA 90 bp | CATGCCCCACCTGTCCGAGCAGACACCAGGGTCAGCCCTTTCCCCAAGGAGGCACCTTTATTGAGCACATaGCCCCTGATGGTGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: HAPPVRADTRVSPFPKEAPLLST*PLMVLM Trigger: CATCAGCACCATCAGGGGCCATGTGCTCAATAAAGG...TGCCTCCTTGGGGAAAGGGCTGACCCTGGTGTCTGCTCGGACAGGTGGGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR-3UTR TCA 90 bp | CCTCCTCTTCCTTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCAAGGAGGCAGCTTCTaGGAAGTACAGACAGGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PPLPSSHSVVQAGLEHMAQGGSF*EVQTGP Trigger: TGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTG...GGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGAGGAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR-3UTR CCA 90 bp | GGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCCTTTATTGAGCACATaGCCCCTGATGGTGCTGATG | + |
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Preference number: 2 (lower is better) Translates to: GADGDILGRPSQQSPPQFPLLST*PLMVLM Trigger: CATCAGCACCATCAGGGGCCATGTGCTCAATAAAGG...GAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTTGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTACTCTGTAGTCCAGGCTaGCTTGGAACACATGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: FLTRSLAKHIEGLITLRLLCSPG*LGTHGP Trigger: AGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAG...TAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR CAA 90 bp | TCACCTGTGTTGTTTATTACAAATCCTCTGAGAGGGAAAGAATTCTaGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTT | + |
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Preference number: 2 (lower is better) Translates to: SPVLFITNPLRGKEF*TRSLAKHIEGLITL Trigger: AAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAATTCTTTCCCTCTCAGAGGATTTGTAATAAACAACACAGGTGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR TCA 72 bp | TCGCCCGGGCGTGCTGTGCCACTCGGTGCAAGCGGCTaGGGGAGGCCTGCAGGTGCTGATTCTGTTCTGTGC | + |
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Preference number: 3 (lower is better) Translates to: SPGRAVPLGASG*GRPAGADSVLC Trigger: GCACAGAACAGAATCAGCACCTGCAGGCCTCCCTCAGCCGCTTGCACCGAGTGGCACAGCACGCCCGGGCGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR GCA 72 bp | TCCTGGCTGAGTAGTGCCTGCTCCCTGCGGGCACCCTaGAGCACACTCCTGTTCTCCTGGGCTCTTCGGATC | + |
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Preference number: 3 (lower is better) Translates to: SWLSSACSLRAP*STLLFSWALRI Trigger: GATCCGAAGAGCCCAGGAGAACAGGAGTGTGCTGCAGGGTGCCCGCAGGGAGCAGGCACTACTCAGCCAGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR-3UTR CAA 90 bp | CTGTTCTGTGCTGAGGCAGGAGAGCTGGAGGTTCCGACCCGAGTCCATGGCTTCGGAGCCTCTGGGTCTTaGGATCCAAGCCGACAGCTC | + |
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Preference number: 3 (lower is better) Translates to: LFCAEAGELEVPTRVHGFGASGS*DPSRQL Trigger: GAGCTGTCGGCTTGGATCCAAAGACCCAGAGGCTCC...GAAGCCATGGACTCGGGTCGGAACCTCCAGCTCTCCTGCCTCAGCACAGAACAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| 3UTR TCA 72 bp | CACCAGGGTCAGCCCTTTCCCCAAGGAGGCAGCTTCTaGGAAGTACAGACAGGGCCAGGACTCGGGACCTTT | + |
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Preference number: 3 (lower is better) Translates to: HQGQPFPQGGSF*EVQTGPGLGTF Trigger: AAAGGTCCCGAGTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGACCCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR CCA 72 bp | TCCTCCTCTTCCTTCTTCTCACTCTGTAGTCCAGGCTaGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCC | + |
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Preference number: 3 (lower is better) Translates to: SSSSFFSLCSPG*LGTHGPPVSAS Trigger: GGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR GCA 90 bp | CATGCCCCACCTGTCCGAGCAGACACCAGGGTCAGCCCTTTCCCCAAGGAGGCAGTAGTGCCTGCTCCCTaGGGGCACCCTGCAGCACAC | + |
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Preference number: 4 (lower is better) Translates to: HAPPVRADTRVSPFPKEAVVPAP*GHPAAH Trigger: GTGTGCTGCAGGGTGCCCGCAGGGAGCAGGCACTAC...TGCCTCCTTGGGGAAAGGGCTGACCCTGGTGTCTGCTCGGACAGGTGGGGCATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | TGTGCTGAGGCAGGAGAGCTGGAGGTTCCGACCCGAGTCCATGGCTTCTGCCAGACTGCCAACAGGGGCTaGAGTCCCAGGGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: CAEAGELEVPTRVHGFCQTANRG*SPRACS Trigger: GCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGT...CTGGCAGAAGCCATGGACTCGGGTCGGAACCTCCAGCTCTCCTGCCTCAGCACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS-3UTR TCA 90 bp | AGCATCTACCAGCAGCCGCACACACTTCGCCCGGGCGTGCTGTGCCACTCGGTGTCACCTTCAGCTGCATaGGGCTGTTCCTGGCTGGTC | + |
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Preference number: 4 (lower is better) Translates to: SIYQQPHTLRPGVLCHSVSPSAA*GCSWLV Trigger: GACCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGA...CACCGAGTGGCACAGCACGCCCGGGCGAAGTGTGTGCGGCTGCTGGTAGATGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS-3UTR CCA 90 bp | TGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGGAGGCTGTTCCTGGCTaGGCCGTGGGCGTCCACGAG | + |
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Preference number: 4 (lower is better) Translates to: CSPGWLGTHGPPVSASQVEAVPG*AVGVHE Trigger: CTCGTGGACGCCCACGGCCCAGCCAGGAACAGCCTC...CACTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR GCA 90 bp | GAGGCAGGAGAGCTGGAGGTTCCGACCCGAGTCCATGGCTTCTGCCAGCCTCTCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: EAGELEVPTRVHGFCQPLAVTFS*MRLFLA Trigger: AGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGC...GAGAGGCTGGCAGAAGCCATGGACTCGGGTCGGAACCTCCAGCTCTCCTGCCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS-3UTR GCA 90 bp | TCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGGCTGAGTAGTGCCTaGTCCCTGCGGGCACCCTGC | + |
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Preference number: 4 (lower is better) Translates to: SVVQAGLEHMALLSQPPKWLSSA*SLRAPC Trigger: GCAGGGTGCCCGCAGGGAGCAGGCACTACTCAGCCA...CTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR TCA 90 bp | GTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGCTCACCTTCAGCTGCATaGGGCTGTTCCTGGCTGGGC | + |
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Preference number: 4 (lower is better) Translates to: VVQAGLEHMALLSQPPKCSPSAA*GCSWLG Trigger: GCCCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGA...GCACTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTTGTGGGAAGCCACCATaGGGTGACACGGGGGACCGT | + |
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Preference number: 4 (lower is better) Translates to: DGDILGRPSQQSPPQFLACGKPP*GDTGDR Trigger: ACGGTCCCCCGTGTCACCTCATGGTGGCTTCCCACA...AGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS-3UTR TCA 90 bp | CTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACTCGGGACGCCACAGTTCCTGGCTaGGTAGTGCCTGCTCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LSPRRQLLRSTDRARTRDATVPG*VVPAPC Trigger: GCAGGGAGCAGGCACTACTCAGCCAGGAACTGTGGC...GTCCCGAGTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR GCA 90 bp | GTCAGCCCTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACTCCCTGCGGGCACCCTaGAGCACACTCCTGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: VSPFPKEAASEKYRQGQDSLRAP*STLLFS Trigger: GGAGAACAGGAGTGTGCTGCAGGGTGCCCGCAGGGA...GTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTCAGCCTGCCCTCAGTTaGGGGCTGGTGAGATGGCTC | + |
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Preference number: 4 (lower is better) Translates to: DGDILGRPSQQSPPQFLAQPALS*GLVRWL Trigger: GAGCCATCTCACCAGCCCCCAACTGAGGGCAGGCTG...AGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS-3UTR CCA 90 bp | GCAGGAGAGCTGGAGGTTCCGACCCGAGTCCATGGCTTCTGCCAGCCTCTCAGGGTTCCTGGCTGGTCTTaGCAGTGGAGTCTGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: AGELEVPTRVHGFCQPLRVPGWS*QWSLVP Trigger: AGGAACCAGACTCCACTGCCAAGACCAGCCAGGAAC...CCTGAGAGGCTGGCAGAAGCCATGGACTCGGGTCGGAACCTCCAGCTCTCCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS-3UTR TCA 90 bp | CTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACTCGGGACGAGGCCTGCAGGTGCTaGTTCTGTTCTGTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: LSPRRQLLRSTDRARTRDEACRC*FCSVLR Trigger: CCTCAGCACAGAACAGAATCAGCACCTGCAGGCCTC...GTCCCGAGTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR GCA 90 bp | TGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGCT | + |
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Preference number: 4 (lower is better) Translates to: CSPGWLGTHGPPVSASQVAVTFS*MRLFLA Trigger: AGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGC...CACTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | TTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAACTGCCAACAGGGGCTaGAGTCCCAGGGCCTGCAGC | + |
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Preference number: 4 (lower is better) Translates to: FFSLCSPGWLGTHGPPVSTANRG*SPRACS Trigger: GCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGT...TGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACCACTGGTCTTGGCAGTaGAGTCTGGTTCCTCCTCGG | + |
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Preference number: 4 (lower is better) Translates to: VSPFPKEAASEKYRQGQDHWSWQ*SLVPPR Trigger: CCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTG...GTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTGAGGGTGAGATGGCTCAGTaGTTAAGAGCGCCGACTGCT | + |
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Preference number: 4 (lower is better) Translates to: GDILGRPSQQSPPQFLAEGEMAQ*LRAPTA Trigger: AGCAGTCGGCGCTCTTAACCACTGAGCCATCTCACC...CTCAGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS-3UTR TCA 90 bp | TCTTCCTTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGAAGCCACCATGAGGTaGCACGGGGGACCGTGGTTC | + |
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Preference number: 4 (lower is better) Translates to: SSFFSLCSPGWLGTHGPPEATMR*HGGPWF Trigger: GAACCACGGTCCCCCGTGTCACCTCATGGTGGCTTC...AGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR TCA 90 bp | GATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTTCAGTTGGGGGCTGGTaGGATGGCTCAGTGGTTAAG | + |
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Preference number: 4 (lower is better) Translates to: DGDILGRPSQQSPPQFLASVGGW*DGSVVK Trigger: CTTAACCACTGAGCCATCTCACCAGCCCCCAACTGA...AGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS-3UTR TCA 90 bp | GGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTGAGCTCTTCCAAAGGTCCTaGGTTCAAATCCCAGCAACC | + |
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Preference number: 4 (lower is better) Translates to: GDILGRPSQQSPPQFLAELFQRS*VQIPAT Trigger: GGTTGCTGGGATTTGAACTCAGGACCTTTGGAAGAG...CTCAGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR CAA 72 bp | CCTCTTCCTTCTTCTCACTCTGTAGTCCAGGCTGGCTaGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAG | + |
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Preference number: 4 (lower is better) Translates to: PLPSSHSVVQAG*EHMALLSQPPK Trigger: CTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GAGAAGTACAGACAGGGCCAGGACTCGGGACCTTTATTGAGCACATGGCCCCTGAGACCTCACTGGTCTTaGCAGTGGAGTCTGGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: EKYRQGQDSGPLLSTWPLRPHWS*QWSLVP Trigger: AGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCT...CAGGGGCCATGTGCTCAATAAAGGTCCCGAGTCCTGGCCCTGTCTGTACTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACCAGTCTTCCTTCCCTTaGAGCTGTGTCATGGATCTC | + |
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Preference number: 4 (lower is better) Translates to: VSPFPKEAASEKYRQGQDQSSFP*SCVMDL Trigger: GAGATCCATGACACAGCTCCAAGGGAAGGAAGACTG...GTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GTCAGCCCTTTCCCCAAGGAGGCAGCTTCTGAGAAGTACAGACAGGGCCAGGACAATGCCAGGGAGACATaGTCACACATGCCCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: VSPFPKEAASEKYRQGQDNARET*SHMPRS Trigger: ACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATT...GTCCTGGCCCTGTCTGTACTTCTCAGAAGCTGCCTCCTTGGGGAAAGGGCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR CCA 90 bp | GGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCAATGCCAGGGAGACATaGTCACACATGCCCAGAAGT | + |
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Preference number: 4 (lower is better) Translates to: GADGDILGRPSQQSPPQFNARET*SHMPRS Trigger: ACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATT...GAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| 3UTR CAA 72 bp | GAGAAGTACAGACAGGGCCAGGACTCGGGACCTTTATaGAGCACATGGCCCCTGATGGTGCTGATGGAGACA | + |
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Preference number: 4 (lower is better) Translates to: EKYRQGQDSGPL*STWPLMVLMET Trigger: TGTCTCCATCAGCACCATCAGGGGCCATGTGCTCAATAAAGGTCCCGAGTCCTGGCCCTGTCTGTACTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| 3UTR CAA 72 bp | AACAGGAGTGTGCCACCACACAGGACTAAAGATCTCTaGAGTCTCAGGCATGCCCCACCTGTCCGAGCAGAC | + |
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Preference number: 4 (lower is better) Translates to: NRSVPPHRTKDL*SLRHAPPVRAD Trigger: GTCTGCTCGGACAGGTGGGGCATGCCTGAGACTCAAGAGATCTTTAGTCCTGTGTGGTGGCACACTCCTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS-3UTR TCA 90 bp | CACTCCTCCTCTTCCTTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGATTCTGTTCTGTGCTaGGGCAGGAGAGCTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: HSSSSFFSLCSPGWLGTHDSVLC*GRRAGG Trigger: ACCTCCAGCTCTCCTGCCTCAGCACAGAACAGAATC...ATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGAGGAGGAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR GCA 90 bp | TGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGAGACATGGTCACACATaGCCAGAAGTTGTCCAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSPGWLGTHGPPVSASQVRHGHT*PEVVQN Trigger: GTTTTGGACAACTTCTGGGCATGTGTGACCATGTCT...CACTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR TCA 90 bp | TTCTTGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTACTCGGTGCAAGCGGCTaGGGGAGGCCTGCAGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLTRSLAKHIEGLITLRLLGASG*GRPAGA Trigger: AGCACCTGCAGGCCTCCCTCAGCCGCTTGCACCGAG...TAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR GCA 90 bp | ACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTACCAAGTCAGGCCAGCCTTGTGTaGTGCCTCGGCGTCCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TRSLAKHIEGLITLRLPSQASLV*CLGVLL Trigger: GAGCAGGACGCCGAGGCAGCACACAAGGCTGGCCTG...ACTTGGTAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CCA 90 bp | CACATTGAAGGATTAATTACCCTTCGGTTACCAAGTCACTACCACCCTAGGCTACTCCGCCACAGTTCCTaGCTGAGTAGTGCCTGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HIEGLITLRLPSHYHPRLLRHSS*LSSACS Trigger: GGAGCAGGCACTACTCAGCCAGGAACTGTGGCGGAG...TAGCCTAGGGTGGTAGTGACTTGGTAACCGAAGGGTAATTAATCCTTCAATGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR TCA 90 bp | TTCTTGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTATGTGGGAAGCCACCATaGGGTGACACGGGGGACCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLTRSLAKHIEGLITLRLCGKPP*GDTGDR Trigger: ACGGTCCCCCGTGTCACCTCATGGTGGCTTCCCACA...TAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CCA 90 bp | GGGAAAGAATTCTTGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCTCCGACCCGAGTCCATaGCTTCTGCCAGCCTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKEFLTRSLAKHIEGLITSDPSP*LLPASQ Trigger: CTGAGAGGCTGGCAGAAGCCATGGACTCGGGTCGGA...GGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAATTCTTTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR GCA 90 bp | TTCTTGACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTACAACTTCACCCCAAATaGCAGGCCAGCCTTGTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: FLTRSLAKHIEGLITLRLQLHPK*QASLVC Trigger: GCACACAAGGCTGGCCTGGCATTTGGGGTGAAGTTG...TAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CCA 90 bp | CACATTGAAGGATTAATTACCCTTCGGTTACCAAGTCACTACCACCCTAGGCTACTTGGAGCTGTGTCATaGATCTCTCCTTGTCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: HIEGLITLRLPSHYHPRLLGAVS*ISPCPD Trigger: ATCTGGACAAGGAGAGATCCATGACACAGCTCCAAG...TAGCCTAGGGTGGTAGTGACTTGGTAACCGAAGGGTAATTAATCCTTCAATGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| 3UTR CAA 72 bp | TTGTTTATTACAAATCCTCTGAGAGGGAAAGAATTCTaGACTAGATCCCTGGCTAAGCACATTGAAGGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LFITNPLRGKEF*TRSLAKHIEGL Trigger: TAATCCTTCAATGTGCTTAGCCAGGGATCTAGTCAAGAATTCTTTCCCTCTCAGAGGATTTGTAATAAACAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS TCA 90 bp | CTTTACAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTGCATaGGGCTGTTCCTGGCTGGGCCGTGGGCGTCCACGAGGGCTCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LYKAECWLARSPSAA*GCSWLGRGRPRGLG Trigger: CCCGAGCCCTCGTGGACGCCCACGGCCCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTGTAAAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 ENSMUST00000142575.8 |
||
| CDS GCA 90 bp | CTGGCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTaGCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCCCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LAGLGSGVWFLLGGY*QQGLESQGLQLPDT Trigger: TGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
||
| CDS CCA 90 bp | AGCGCGGTCACCTTCAGCTGCATGAGGCTGTTCCTGGCTGGGCCGTaGGCGTCCACGAGGGCTCGGGATAAGTCCACACAGCGCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: SAVTFSCMRLFLAGP*ASTRARDKSTQRSM Trigger: CATGCTGCGCTGTGTGGACTTATCCCGAGCCCTCGTGGACGCCCACGGCCCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 ENSMUST00000142575.8 |
||
| CDS CCA 90 bp | GCTGTTCCTGGCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTaGGTACTGCCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: AVPGWSWQWSLVPPR*VLPTGAGVPGPAAA Trigger: GGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAGGAACAGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
||
| CDS TCA 90 bp | GCCGGGATCCCAGGAGTCGCTGAGACCAGGCCGCTAGTCCATGAGTaGCCAAAGGGGGCCAGGCGCATAGGCGAAGCACTAGCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: AGIPGVAETRPLVHE*PKGARRIGEALAKP Trigger: GGGCTTTGCTAGTGCTTCGCCTATGCGCCTGGCCCCCTTTGGTCACTCATGGACTAGCGGCCTGGTCTCAGCGACTCCTGGGATCCCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133318.8 |
||
| CDS GCA 90 bp | CTCACTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTaGCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCCCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: LTGLGSGVWFLLGGY*QQGLESQGLQLPDT Trigger: TGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
||
| CDS GCA 90 bp | GTTCCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTaGCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCCCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: VPGLGSGVWFLLGGY*QQGLESQGLQLPDT Trigger: TGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
||
| CDS GCA 90 bp | TCACCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTaGCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCCCGACACA | + |
|
Preference number: 5 (lower is better) Translates to: SPGLGSGVWFLLGGY*QQGLESQGLQLPDT Trigger: TGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGTGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142575.8 |
||
| CDS CCA 90 bp | GCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTaGAGTCCCAGGGCCTGCAGCTGCCCGACACAGTTCCTCACTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AVESGSSSVGTANRG*SPRACSCPTQFLTS Trigger: GGAAGTGAGGAACTGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
||
| CDS CCA 90 bp | ACCAGACCTCACTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTaGGTACTGCCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: TRPHWSWQWSLVPPR*VLPTGAGVPGPAAA Trigger: GGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
||
| CDS TCA 90 bp | CCCGGCCACAAACTGCCCGTAGATGGATGCTCGAAGAAGTGCGCCTaGGAGCCGGGATCCCAGGAGTCGCTGAGACCAGGCCTGAAACGC | + |
|
Preference number: 5 (lower is better) Translates to: PGHKLPVDGCSKKCA*EPGSQESLRPGLKR Trigger: GCGTTTCAGGCCTGGTCTCAGCGACTCCTGGGATCCCGGCTCTCAGGCGCACTTCTTCGAGCATCCATCTACGGGCAGTTTGTGGCCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 |
||
| CDS GCA 90 bp | AGCTCTTTACAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGCTGGGCCGTGGGCGTCCACGAGGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SSLQSRVLASAVTFS*MRLFLAGPWASTRA Trigger: AGCCCTCGTGGACGCCCACGGCCCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTGTAAAGAGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 ENSMUST00000142575.8 |
||
| CDS CCA 90 bp | TCTCTACTCACCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGGTaGGTACTGCCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SLLTWSWQWSLVPPR*VLPTGAGVPGPAAA Trigger: GGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGTGAGTAGAGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142575.8 |
||
| CDS-3UTR CAA 90 bp | CATGCCCCACCTGTCCGAGCAGACACCAGGGTCAGCCCTTTCCCCAAGGAGGCAGGAGCCTCTGGGTCTTaGGATCCAAGCCGACAGCTC | + |
|
Preference number: 5 (lower is better) Translates to: HAPPVRADTRVSPFPKEAGASGS*DPSRQL Trigger: GAGCTGTCGGCTTGGATCCAAAGACCCAGAGGCTCC...TGCCTCCTTGGGGAAAGGGCTGACCCTGGTGTCTGCTCGGACAGGTGGGGCATG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CAA 90 bp | GGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGTTCCTGGCTGAGCCAGCCTGCCCTCAGTaGGGGGCTGGTGAGATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: GDILGRPSQQSPPQFLAEPACPQ*GAGEMA Trigger: AGCCATCTCACCAGCCCCCAACTGAGGGCAGGCTGG...CTCAGCCAGGAACTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
||
| CDS TCA 90 bp | CCCGGCCACAAACTGCCCGTAGATGGATGCTCGAAGAAGTGCGCCTaGGAGCCGGGATCCCAGGAGTCGCTGAGACCAGGCCTGAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: PGHKLPVDGCSKKCA*EPGSQESLRPGLKL Trigger: CAGTTTCAGGCCTGGTCTCAGCGACTCCTGGGATCCCGGCTCTCAGGCGCACTTCTTCGAGCATCCATCTACGGGCAGTTTGTGGCCGGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142575.8 |
||
| CDS-3UTR CAA 90 bp | TGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAGCCTCCCAAGTGAATGCCAGGCCAGCCTaGTGTGCTGCCTCGGCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: CSPGWLGTHGPPVSASQVNARPA*CAASAS Trigger: GGACGCCGAGGCAGCACACAAGGCTGGCCTGGCATT...CACTTGGGAGGCTGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS TCA 90 bp | ATAGGCGAAGCACTAGCAAAGCCCGTGCCAGTTCTGCGGTTCCCTTaGCATGGAAGGCCCCACCATCAAAGCGCAGGGGCTGCCAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: IGEALAKPVPVLRFP*HGRPHHQSAGAASH Trigger: GTGGCTGGCAGCCCCTGCGCTTTGATGGTGGGGCCTTCCATGTCAAGGGAACCGCAGAACTGGCACGGGCTTTGCTAGTGCTTCGCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000133318.8 |
||
| CDS CCA 90 bp | TCCTCACTTCCTCTGCTGTCTCCCCGGCCACAAACTGCCCGTAGATaGATGCTCGAAGAAGTGCGCCTGAGAGCCGGGATCCCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: SSLPLLSPRPQTARR*MLEEVRLRAGIPGV Trigger: GACTCCTGGGATCCCGGCTCTCAGGCGCACTTCTTCGAGCATCCATCTACGGGCAGTTTGTGGCCGGGGAGACAGCAGAGGAAGTGAGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
||
| CDS CCA 90 bp | CACCTTCAGCTGCATGAGGCTGTTCCTGGTCTTGGCAGTGGAGTCTaGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTGGAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLQLHEAVPGLGSGV*FLLGGYCQQGLESQ Trigger: CTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
||
| CDS CCA 90 bp | TTCAGCTGCATGAGGCTGTTCCTGGCTGGTCTTGGCAGTGGAGTCTaGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTGGAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FSCMRLFLAGLGSGV*FLLGGYCQQGLESQ Trigger: CTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
||
| CDS CCA 90 bp | GGTCACCTTCAGCTGCATGAGGCTGTTCCTGGCTGGTCTTGGCAGTaGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: GHLQLHEAVPGWSWQ*SLVPPRWVLPTGAG Trigger: TCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
||
| CDS TCA 90 bp | ATCCCAGGAGTCGCTGAGACCAGGCCTGAAACGCTAGTCCATGAGTaGCCAAAGGGGGCCAGGCGCATAGGCGAAGCACTAGCAAAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IPGVAETRPETLVHE*PKGARRIGEALAKP Trigger: GGGCTTTGCTAGTGCTTCGCCTATGCGCCTGGCCCCCTTTGGTCACTCATGGACTAGCGTTTCAGGCCTGGTCTCAGCGACTCCTGGGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 |
||
| CDS TCA 90 bp | GTTGCCTGGCGAACGGATTCTTCATTGTGGGAAGCCACCATGAGGTaGCACGGGGGACCGTGGTTCGACACGCAGCGCAGCATCAGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VAWRTDSSLWEATMR*HGGPWFDTQRSISS Trigger: AGAGCTGATGCTGCGCTGCGTGTCGAACCACGGTCCCCCGTGTCACCTCATGGTGGCTTCCCACAATGAAGAATCCGTTCGCCAGGCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000122876.2 |
||
| CDS TCA 90 bp | CTTTACAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTGCATaGGGCTGTTCCTGGTCTTGGCAGTGGAGTCTGGTTCCTCCTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LYKAECWLARSPSAA*GCSWSWQWSLVPPR Trigger: CCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTGTAAAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
||
| CDS CCA 90 bp | TTCTACCCTTCCTCTCTCTACTCACCTGGTCTTGGCAGTGGAGTCTaGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTGGAGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FYPSSLYSPGLGSGV*FLLGGYCQQGLESQ Trigger: CTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGTGAGTAGAGAGAGGAAGGGTAGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000142575.8 |
||
| CDS GCA 90 bp | AGCTCTTTACAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGTCTTGGCAGTGGAGTCTGGTTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSLQSRVLASAVTFS*MRLFLVLAVESGSS Trigger: GGAGGAACCAGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTGTAAAGAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
||
| CDS-3UTR CAA 90 bp | GATGGTGCTGATGGAGACATCTTAGGCCGTCCTTCCCAGCAGTCTCCGCCACAGACACATGCCCAGAAGTaGTCCAAAACAGACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: DGADGDILGRPSQQSPPQTHAQK*SKTDRP Trigger: GGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGT...CTGTGGCGGAGACTGCTGGGAAGGACGGCCTAAGATGTCTCCATCAGCACCATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
||
| CDS CCA 90 bp | CATAGTCAGGCTGGGTACAGTCTTCCTTCCCTTGGAGCTGTGTCATaGATCTCTCCTTGTCCAGATAGGCACCTCGCACCAACTTCACCC | + |
|
Preference number: 5 (lower is better) Translates to: HSQAGYSLPSLGAVS*ISPCPDRHLAPTSP Trigger: GGGTGAAGTTGGTGCGAGGTGCCTATCTGGACAAGGAGAGATCCATGACACAGCTCCAAGGGAAGGAAGACTGTACCCAGCCTGACTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CAA 90 bp | CACTCCTCCTCTTCCTTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATCAGACCTCACTGGTCTaGGCAGTGGAGTCTGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: HSSSSFFSLCSPGWLGTHQTSLV*AVESGS Trigger: GGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTG...ATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAAGGAAGAGGAGGAGTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS GCA 90 bp | CCATATATCCAGCCTGCCCTAATGCCAGGGAGACATGGTCACACATaGCCAGAAGTTGTCCAAAACAGACAGGCCCATCCAGAGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: PYIQPALMPGRHGHT*PEVVQNRQAHPEEC Trigger: GCATTCCTCTGGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATTAGGGCAGGCTGGATATATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS CCA 90 bp | ATATATCCAGCCTGCCCTCAGTTGGGGGCTGGTGAGATGGCTCAGTaGTTAAGAGCGCCGACTGCTCTTCCAAAGGTCCTGAGTTCAAAT | + |
|
Preference number: 5 (lower is better) Translates to: IYPACPQLGAGEMAQ*LRAPTALPKVLSSN Trigger: ATTTGAACTCAGGACCTTTGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCACCAGCCCCCAACTGAGGGCAGGCTGGATATAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAACACATGCCCAGAAGTaGTCCAAAACAGACAGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: FFSLCSPGWLGTHGPPVSTHAQK*SKTDRP Trigger: GGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGT...TGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS CCA 90 bp | GACTTGTACACCATATATCCAGCCTGCCCTAATGCCAGGGAGACATaGTCACACATGCCCAGAAGTTGTCCAAAACAGACAGGCCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: DLYTIYPACPNARET*SHMPRSCPKQTGPS Trigger: GGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATTAGGGCAGGCTGGATATATGGTGTACAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
||
| CDS-3UTR CAA 90 bp | TTCTTCTCACTCTGTAGTCCAGGCTGGCTTGGAACACATGGCCCTCCTGTCTCAACAGTCTTCCTTCCCTaGGAGCTGTGTCATGGATCT | + |
|
Preference number: 5 (lower is better) Translates to: FFSLCSPGWLGTHGPPVSTVFLP*ELCHGS Trigger: AGATCCATGACACAGCTCCAAGGGAAGGAAGACTGT...TGAGACAGGAGGGCCATGTGTTCCAAGCCAGCCTGGACTACAGAGTGAGAAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS GCA 90 bp | GAAGACAGCTACAGTGTACTAATGCCAGGGAGACATGGTCACACATaGCCAGAAGTTGTCCAAAACAGACAGGCCCATCCAGAGGAATGC | + |
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Preference number: 5 (lower is better) Translates to: EDSYSVLMPGRHGHT*PEVVQNRQAHPEEC Trigger: GCATTCCTCTGGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATTAGTACACTGTAGCTGTCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS-3UTR CAA 90 bp | ACTAGATCCCTGGCTAAGCACATTGAAGGATTAATTACCCTTCGGTTACCAAGTCGAACGGATTCTTCATaGTGGGAAGCCACCATGAGG | + |
|
Preference number: 5 (lower is better) Translates to: TRSLAKHIEGLITLRLPSRTDSS*WEATMR Trigger: CCTCATGGTGGCTTCCCACAATGAAGAATCCGTTCG...ACTTGGTAACCGAAGGGTAATTAATCCTTCAATGTGCTTAGCCAGGGATCTAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS GCA 72 bp | CAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGCTGGGCCGTGGGCGTCC | + |
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Preference number: 6 (lower is better) Translates to: QSRVLASAVTFS*MRLFLAGPWAS Trigger: GGACGCCCACGGCCCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS GCA 72 bp | CTTGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTaGCAACAGGGGCTGGAGTCCCAGGGCCTGCAGCTG | + |
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Preference number: 6 (lower is better) Translates to: LGSGVWFLLGGY*QQGLESQGLQL Trigger: CAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS CCA 72 bp | TCTGGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTaGAGTCCCAGGGCCTGCAGCTGCCCGACACAGTTC | + |
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Preference number: 6 (lower is better) Translates to: SGSSSVGTANRG*SPRACSCPTQF Trigger: GAACTGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS CAA 72 bp | TCAAAGCGCAGGGGCTGCCAGCCACCTGTAGAGGGCTaGGAGGGGCCATACAGCGGCAGACGCGTCCAGATC | + |
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Preference number: 6 (lower is better) Translates to: SKRRGCQPPVEG*EGPYSGRRVQI Trigger: GATCTGGACGCGTCTGCCGCTGTATGGCCCCTCCAAGCCCTCTACAGGTGGCTGGCAGCCCCTGCGCTTTGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000133318.8 |
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| CDS CAA 72 bp | CCTCGCACCAACTTCACCCCAAATGCCAGGCCAGCCTaGTGTGCTGCCTCGGCGTCCTGCTCCAGCCGTTGG | + |
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Preference number: 6 (lower is better) Translates to: PRTNFTPNARPA*CAASASCSSRW Trigger: CCAACGGCTGGAGCAGGACGCCGAGGCAGCACACAAGGCTGGCCTGGCATTTGGGGTGAAGTTGGTGCGAGG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000131040.2 |
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| CDS GCA 72 bp | GTGGGTACTGCCAACAGGGGCTGGAGTCCCAGGGCCTaGAGCTGCCCGACACAGTTCCTCACTTCCTCTGCT | + |
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Preference number: 6 (lower is better) Translates to: VGTANRGWSPRA*SCPTQFLTSSA Trigger: AGCAGAGGAAGTGAGGAACTGTGTCGGGCAGCTGCAGGCCCTGGGACTCCAGCCCCTGTTGGCAGTACCCAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS TCA 72 bp | GCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTGCATaGGGCTGTTCCTGGCTGGTCTTGGCAGTGGAGTCT | + |
|
Preference number: 6 (lower is better) Translates to: AECWLARSPSAA*GCSWLVLAVES Trigger: AGACTCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS TCA 72 bp | CCAGGAGTCGCTGAGACCAGGCCGCTAGTCCATGAGTaGCCAAAGGGGGCCAGGCGCATAGGCGAAGCACTA | + |
|
Preference number: 6 (lower is better) Translates to: PGVAETRPLVHE*PKGARRIGEAL Trigger: TAGTGCTTCGCCTATGCGCCTGGCCCCCTTTGGTCACTCATGGACTAGCGGCCTGGTCTCAGCGACTCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000133318.8 |
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| CDS GCA 72 bp | GGCCTGCAGCTGCCCGACACAGTTCCTCACTTCCTCTaGTGTCTCCCCGGCCACAAACTGCCCGTAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: GLQLPDTVPHFL*CLPGHKLPVDG Trigger: TCCATCTACGGGCAGTTTGTGGCCGGGGAGACAGCAGAGGAAGTGAGGAACTGTGTCGGGCAGCTGCAGGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS GCA 72 bp | CAACTTCACCCCAAATGCCAGGCCAGCCTTGTGTGCTaGCTCGGCGTCCTGCTCCAGCCGTTGGTGAGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: QLHPKCQASLVC*LGVLLQPLVSV Trigger: GACACTCACCAACGGCTGGAGCAGGACGCCGAGGCAGCACACAAGGCTGGCCTGGCATTTGGGGTGAAGTTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000131040.2 |
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| CDS GCA 72 bp | CACCAACTTCACCCCAAATGCCAGGCCAGCCTTGTGTaGTGCCTCGGCGTCCTGCTCCAGCCGTTGGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: HQLHPKCQASLV*CLGVLLQPLVS Trigger: ACTCACCAACGGCTGGAGCAGGACGCCGAGGCAGCACACAAGGCTGGCCTGGCATTTGGGGTGAAGTTGGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000131040.2 |
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| CDS CCA 72 bp | CCTCTGCTGTCTCCCCGGCCACAAACTGCCCGTAGATaGATGCTCGAAGAAGTGCGCCTGAGAGCCGGGATC | + |
|
Preference number: 6 (lower is better) Translates to: PLLSPRPQTARR*MLEEVRLRAGI Trigger: GATCCCGGCTCTCAGGCGCACTTCTTCGAGCATCCATCTACGGGCAGTTTGTGGCCGGGGAGACAGCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS CAA 90 bp | CATAGGCGAAGCACTAGCAAAGCCCGTGCCAGTTCTGCGGTTCCCTaGACATGGAAGGCCCCACCATCAAAGCGCAGGGGCTGCCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HRRSTSKARASSAVP*TWKAPPSKRRGCQP Trigger: TGGCTGGCAGCCCCTGCGCTTTGATGGTGGGGCCTTCCATGTCAAGGGAACCGCAGAACTGGCACGGGCTTTGCTAGTGCTTCGCCTATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000133318.8 |
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| CDS CAA 90 bp | CTGGCTAGCGCGGTCACCTTCAGCTGCATGAGGCTGTTCCTGGTCTaGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: LASAVTFSCMRLFLV*AVESGSSSVGTANR Trigger: CCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
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| CDS TCA 72 bp | GCACTAGCAAAGCCCGTGCCAGTTCTGCGGTTCCCTTaGCATGGAAGGCCCCACCATCAAAGCGCAGGGGCT | + |
|
Preference number: 6 (lower is better) Translates to: ALAKPVPVLRFP*HGRPHHQSAGA Trigger: AGCCCCTGCGCTTTGATGGTGGGGCCTTCCATGTCAAGGGAACCGCAGAACTGGCACGGGCTTTGCTAGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000133318.8 |
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| CDS TCA 72 bp | AAACTGCCCGTAGATGGATGCTCGAAGAAGTGCGCCTaGGAGCCGGGATCCCAGGAGTCGCTGAGACCAGGC | + |
|
Preference number: 6 (lower is better) Translates to: KLPVDGCSKKCA*EPGSQESLRPG Trigger: GCCTGGTCTCAGCGACTCCTGGGATCCCGGCTCTCAGGCGCACTTCTTCGAGCATCCATCTACGGGCAGTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000058280.13 ENSMUST00000130839.8 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS TCA 72 bp | CGAACGGATTCTTCATTGTGGGAAGCCACCATGAGGTaGCACGGGGGACCGTGGTTCGACACGCAGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RTDSSLWEATMR*HGGPWFDTQRS Trigger: GCTGCGCTGCGTGTCGAACCACGGTCCCCCGTGTCACCTCATGGTGGCTTCCCACAATGAAGAATCCGTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000122876.2 |
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| CDS TCA 72 bp | CCTGGCGAACGGATTCTTCATTGTGGGAAGCCACCATaGGGTGACACGGGGGACCGTGGTTCGACACGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: PGERILHCGKPP*GDTGDRGSTRS Trigger: GCTGCGTGTCGAACCACGGTCCCCCGTGTCACCTCATGGTGGCTTCCCACAATGAAGAATCCGTTCGCCAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000122876.2 |
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| CDS TCA 72 bp | GCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTGCATaGGGCTGTTCCTGGTCTTGGCAGTGGAGTCTGGTT | + |
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Preference number: 6 (lower is better) Translates to: AECWLARSPSAA*GCSWSWQWSLV Trigger: AACCAGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
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| CDS GCA 72 bp | CAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGCTGGTCTTGGCAGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: QSRVLASAVTFS*MRLFLAGLGSG Trigger: TCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS CCA 72 bp | GCCTGCCCTCAGTTGGGGGCTGGTGAGATGGCTCAGTaGTTAAGAGCGCCGACTGCTCTTCCAAAGGTCCTG | + |
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Preference number: 6 (lower is better) Translates to: ACPQLGAGEMAQ*LRAPTALPKVL Trigger: CAGGACCTTTGGAAGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCACCAGCCCCCAACTGAGGGCAGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS GCA 72 bp | CAAAGCCGAGTGCTGGCTAGCGCGGTCACCTTCAGCTaGATGAGGCTGTTCCTGGTCTTGGCAGTGGAGTCT | + |
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Preference number: 6 (lower is better) Translates to: QSRVLASAVTFS*MRLFLVLAVES Trigger: AGACTCCACTGCCAAGACCAGGAACAGCCTCATGCAGCTGAAGGTGACCGCGCTAGCCAGCACTCGGCTTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000131040.2 |
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| CDS CCA 72 bp | CTCATACCAGACCTCACTGGTCTTGGCAGTGGAGTCTaGTTCCTCCTCGGTGGGTACTGCCAACAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LIPDLTGLGSGV*FLLGGYCQQGL Trigger: CAGCCCCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTGGTATGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
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| CDS CCA 72 bp | CAGCTGCATGAGGCTGTTCCTGGCTGGTCTTGGCAGTaGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACA | + |
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Preference number: 6 (lower is better) Translates to: QLHEAVPGWSWQ*SLVPPRWVLPT Trigger: TGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS CCA 72 bp | CACCTTCAGCTGCATGAGGCTGTTCCTGGCTGGTCTTaGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTG | + |
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Preference number: 6 (lower is better) Translates to: HLQLHEAVPGWS*QWSLVPPRWVL Trigger: CAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGCCAGGAACAGCCTCATGCAGCTGAAGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130839.8 |
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| CDS CAA 90 bp | CGCAGCATGGCGCTAAGGTTCTCCTCATACCAGACCTCACTGGTCTaGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACAGG | + |
|
Preference number: 6 (lower is better) Translates to: RSMALRFSSYQTSLV*AVESGSSSVGTANR Trigger: CCTGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTGGTATGAGGAGAACCTTAGCGCCATGCTGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
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| CDS TCA 72 bp | CACCATATATCCAGCCTGCCCTCAGTTGGGGGCTGGTaGGATGGCTCAGTGGTTAAGAGCGCCGACTGCTCT | + |
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Preference number: 6 (lower is better) Translates to: HHISSLPSVGGW*DGSVVKSADCS Trigger: AGAGCAGTCGGCGCTCTTAACCACTGAGCCATCTCACCAGCCCCCAACTGAGGGCAGGCTGGATATATGGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS CCA 72 bp | CTGCCAGCCTCTCAGGGCTCAGCTCCGAGGAGCCTCTaGGTCTTTGGATCCAAGCCGACAGCTCTTTACAAA | + |
|
Preference number: 6 (lower is better) Translates to: LPASQGSAPRSL*VFGSKPTALYK Trigger: TTTGTAAAGAGCTGTCGGCTTGGATCCAAAGACCCAGAGGCTCCTCGGAGCTGAGCCCTGAGAGGCTGGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000058280.13 ENSMUST00000131040.2 ENSMUST00000133318.8 ENSMUST00000142575.8 |
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| CDS CCA 72 bp | GGTTCTCCTCATACCAGACCTCACTGGTCTTGGCAGTaGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: GSPHTRPHWSWQ*SLVPPRWVLPT Trigger: TGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTGGTATGAGGAGAACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
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| CDS CCA 72 bp | CTACCCTTCCTCTCTCTACTCACCTGGTCTTGGCAGTaGAGTCTGGTTCCTCCTCGGTGGGTACTGCCAACA | + |
|
Preference number: 6 (lower is better) Translates to: LPFLSLLTWSWQ*SLVPPRWVLPT Trigger: TGTTGGCAGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGGTGAGTAGAGAGAGGAAGGGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000142575.8 |
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| CDS CAA 72 bp | GCGCTAAGGTTCTCCTCATACCAGACCTCACTGGTCTaGGCAGTGGAGTCTGGTTCCTCCTCGGTGGGTACT | + |
|
Preference number: 6 (lower is better) Translates to: ALRFSSYQTSLV*AVESGSSSVGT Trigger: AGTACCCACCGAGGAGGAACCAGACTCCACTGCCAAGACCAGTGAGGTCTGGTATGAGGAGAACCTTAGCGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000058280.13 ENSMUST00000133318.8 |
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| CDS CAA 90 bp | CCGACTAGTGGCCTCATAGTCAGGCTGGGTACAGTCTTCCTTCCCTaGGAGCTGTGTCATGGATCTCTCCTTGTCCAGATAGGCACCTCG | + |
|
Preference number: 6 (lower is better) Translates to: PTSGLIVRLGTVFLP*ELCHGSLLVQIGTS Trigger: CGAGGTGCCTATCTGGACAAGGAGAGATCCATGACACAGCTCCAAGGGAAGGAAGACTGTACCCAGCCTGACTATGAGGCCACTAGTCGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS GCA 72 bp | CAGCCTGCCCTAATGCCAGGGAGACATGGTCACACATaGCCAGAAGTTGTCCAAAACAGACAGGCCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: QPALMPGRHGHT*PEVVQNRQAHP Trigger: TGGATGGGCCTGTCTGTTTTGGACAACTTCTGGGCATGTGTGACCATGTCTCCCTGGCATTAGGGCAGGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS CCA 72 bp | GCTGGGTACAGTCTTCCTTCCCTTGGAGCTGTGTCATaGATCTCTCCTTGTCCAGATAGGCACCTCGCACCA | + |
|
Preference number: 6 (lower is better) Translates to: AGYSLPSLGAVS*ISPCPDRHLAP Trigger: TGGTGCGAGGTGCCTATCTGGACAAGGAGAGATCCATGACACAGCTCCAAGGGAAGGAAGACTGTACCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS CAA 72 bp | GGCCTCATAGTCAGGCTGGGTACAGTCTTCCTTCCCTaGGAGCTGTGTCATGGATCTCTCCTTGTCCAGATA | + |
|
Preference number: 6 (lower is better) Translates to: GLIVRLGTVFLP*ELCHGSLLVQI Trigger: TATCTGGACAAGGAGAGATCCATGACACAGCTCCAAGGGAAGGAAGACTGTACCCAGCCTGACTATGAGGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000058280.13 |
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| CDS CAA 72 bp | ATAGACTTGTACACCATATATCCAGCCTGCCCTCAGTaGGGGGCTGGTGAGATGGCTCAGTGGTTAAGAGCG | + |
|
Preference number: 6 (lower is better) Translates to: IDLYTIYPACPQ*GAGEMAQWLRA Trigger: CGCTCTTAACCACTGAGCCATCTCACCAGCCCCCAACTGAGGGCAGGCTGGATATATGGTGTACAAGTCTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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| CDS TCA 72 bp | ACCGCATGGTGGCTCACAACCATTCGTAACGAAATCTaGTGCCATCTTCTGGAGTATCTGAAGACAGCTACA | + |
|
Preference number: 6 (lower is better) Translates to: TAWWLTTIRNEI*CHLLEYLKTAT Trigger: TGTAGCTGTCTTCAGATACTCCAGAAGATGGCATCAGATTTCGTTACGAATGGTTGTGAGCCACCATGCGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000122876.2 |
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