Pregenerated sensors for PRODH (Mus musculus)
Ensembl gene IDs: ENSMUSG00000003526Ensembl transcript IDs: ENSMUST00000003620.13, ENSMUST00000126087.2, ENSMUST00000132241.2, ENSMUST00000136776.8, ENSMUST00000139861.2, ENSMUST00000141635.8, ENSMUST00000232554.2
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AAGGCTCCTGCGGTGACTAGGCCGGATGGTGGAAGAGGCTGCCAGTaGGCAGCCGCCTGCGGAGCTCCTGCCATAGCAGCTGCCTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: KAPAVTRPDGGRGCQ*AAACGAPAIAAASL Trigger: GAGAGAGGCAGCTGCTATGGCAGGAGCTCCGCAGGCGGCTGCGCACTGGCAGCCTCTTCCACCATCCGGCCTAGTCACCGCAGGAGCCTT 67% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR TCA 90 bp | GTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTaGCCAGACGACCATCTTGGGCACTGTTCCTCAGGAGCTGTCCAC | + |
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Preference number: 1 (lower is better) Translates to: VSVPWGTGSPRGQPL*PDDHLGHCSSGAVH Trigger: GTGGACAGCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR TCA 90 bp | TGGCAATCAGATCAAAGGCTCTCCCAGTCTTGGCCACCACCTAGCTaGGGCCGAAACCCTGGTGCATTTCAGGGTCACACCTGTGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: WQSDQRLSQSWPPPS*GRNPGAFQGHTCAL Trigger: CAAGGCACAGGTGTGACCCTGAAATGCACCAGGGTTTCGGCCTCAGCTAGGTGGTGGCCAAGACTGGGAGAGCCTTTGATCTGATTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR CCA 90 bp | TACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTaGGCACTGTTCCTCAGGAGCTGTCCACTGATGAAATCCCGCCTT | + |
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Preference number: 1 (lower is better) Translates to: YRKSQRAASVTRRPS*ALFLRSCPLMKSRL Trigger: AAGGCGGGATTTCATCAGTGGACAGCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR TCA 90 bp | ACAGCGCTCCTGTCTGCAGGAAGCAAGAATTCCAGGCACAACTCATaGGGGCTGCTGGCAATCAGATCAAAGGCTCTCCCAGTCTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: TALLSAGSKNSRHNS*GLLAIRSKALPVLA Trigger: GGCCAAGACTGGGAGAGCCTTTGATCTGATTGCCAGCAGCCCTCATGAGTTGTGCCTGGAATTCTTGCTTCCTGCAGACAGGAGCGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR CCA 90 bp | TGGCAGAAGGTTAATCCTGGACTAGGGCTCTGTAACCTGCAGAGGTaGTCAGTGCTTACTCAGATTAGTGGGGCAGCTCCCAGGGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: WQKVNPGLGLCNLQR*SVLTQISGAAPRGS Trigger: AGAGCCCCTGGGAGCTGCCCCACTAATCTGAGTAAGCACTGACCACCTCTGCAGGTTACAGAGCCCTAGTCCAGGATTAACCTTCTGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR CCA 90 bp | AAGCTACAGCCTCAAACTGTACAGGACTATGTGGGGAGCGGGATATaGCCAGGGCCAGAGTTTGCAGTTCTATCCCTCAACCCTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: KLQPQTVQDYVGSGI*PGPEFAVLSLNPPL Trigger: CAGTGGAGGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTACAGTTTGAGGCTGTAGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR CCA 90 bp | CCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTaGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTTCTATCCC | + |
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Preference number: 1 (lower is better) Translates to: PLRIQSYSLKLYRTM*GAGYGQGQSLQFYP Trigger: GGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR GCA 90 bp | TTGAGATTACATTTCCTTCATCCTTTTCCTCCCTACAAATTTTCCTaGATGTCCCTCTTTGCTCTCTTTCAAATTTATGGCCTCTTAAAA | + |
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Preference number: 1 (lower is better) Translates to: LRLHFLHPFPPYKFS*MSLFALFQIYGLLK Trigger: TTTTAAGAGGCCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGAAAAGGATGAAGGAAATGTAATCTCAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| 3UTR-3UTR TCA 90 bp | GCCGGATGGTGGAAGAGGCTGCCAGTGCGCAGCCGCCTGCGGAGCTCCTGCCATCGATCTCTGCTGCCCTaGCACGCTCTTGGGCCATGT | + |
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Preference number: 2 (lower is better) Translates to: AGWWKRLPVRSRLRSSCHRSLLP*HALGPC Trigger: ACATGGCCCAAGAGCGTGTCAGGGCAGCAGAGATCG...ATGGCAGGAGCTCCGCAGGCGGCTGCGCACTGGCAGCCTCTTCCACCATCCGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTAAGCTGTGCCCCGCCTaGAGCCCCAGAGGTAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: QEVPEGSLCDQTTILGTVKLCPA*SPRGKG Trigger: CCCCTTACCTCTGGGGCTTCAGGCGGGGCACAGCTT...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTGTCTGGGCAGGTTaGGCTAAGGAACCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: PTPECLFLGVQEVPEGSLCVWAG*AKEPQP Trigger: GGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACA...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR TCA 90 bp | TGTTCTCCAGGGCACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATTGTCCGAAGCACACCTaGCCATCAGCAGGATGCAGG | + |
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Preference number: 2 (lower is better) Translates to: CSPGHGGTGKGVPPSQGHCPKHT*PSAGCR Trigger: CCTGCATCCTGCTGATGGTCAGGTGTGCTTCGGACA...ATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGTGCCCTGGAGAACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCACCAGACGACCATCTTaGGCACTGTTCCTCAGGAGC | + |
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Preference number: 2 (lower is better) Translates to: PTPECLFLGVQEVPEGSLTRRPS*ALFLRS Trigger: GCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGT...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR CAA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTaGGGCACTGTTCCTCAGGAGCTGTCCACTGATGAAATCCCGCCT | + |
|
Preference number: 2 (lower is better) Translates to: VQEVPEGSLCDQTTI*GTVPQELSTDEIPP Trigger: AGGCGGGATTTCATCAGTGGACAGCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR GCA 90 bp | TGTTCTCCAGGGCACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATTCTGCCTTGGTGCTGTaGTTCAGCTCCTCCAGAACA | + |
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Preference number: 2 (lower is better) Translates to: CSPGHGGTGKGVPPSQGHSALVL*FSSSRT Trigger: TGTTCTGGAGGAGCTGAAGCACAGCACCAAGGCAGA...ATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGTGCCCTGGAGAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR CAA 90 bp | CTGTACAGGACTATGTGGGGAGCGGGATATGGCCAGGGCCAGAGTTaGCAGTTCTATCCCTCAACCCTCCACTGGTGCAGGCCCACAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LYRTMWGAGYGQGQS*QFYPSTLHWCRPTK Trigger: TTTTGTGGGCCTGCACCAGTGGAGGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTAAGAGGGCAGCCTCTGTaGCCAGACGACCATCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLRGQPL*PDDHLG Trigger: CCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCT...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR GCA 90 bp | ACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATACTTCTGCACAACGTGAAGTaGACGGTGTCCTCGTTGTGG | + |
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Preference number: 2 (lower is better) Translates to: TAGQVREYLHHRAIGHILLHNVK*TVSSLW Trigger: CCACAACGAGGACACCGTGCACTTCACGTTGTGCAG...AAGTATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTATGTGTCTGGGCAGGTTaGGCTAAGGAACCCCAGCCC | + |
|
Preference number: 2 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLCVWAG*AKEPQP Trigger: GGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACA...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTACCAGACGACCATCTTaGGCACTGTTCCTCAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: TPECLFLGVQEVPEGSLCTRRPS*ALFLRS Trigger: GCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGT...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR CCA 90 bp | GTACAGGACTATGTGGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTTCTACCCTCAACCCTCCACTaGTGCAGGCCCACAAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: VQDYVGSGIWPGPEFAVLPSTLH*CRPTKA Trigger: TGCTTTTGTGGGCCTGCACCAGTGGAGGGTTGAGGG...TAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR CCA 90 bp | GTGGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTTCTATCCCTCAACCCTACTCATGAGGGCTGCTaGCAATCAGATCAAAGGCTC | + |
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Preference number: 2 (lower is better) Translates to: VGSGIWPGPEFAVLSLNPTHEGC*QSDQRL Trigger: GAGCCTTTGATCTGATTGCCAGCAGCCCTCATGAGT...AGGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR TCA 90 bp | CACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATACTTGTCATAGGCATCCTTaGGGTAGCACTGGAATGTGT | + |
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Preference number: 2 (lower is better) Translates to: HGGTGKGVPPSQGHRAHTCHRHP*GSTGMC Trigger: ACACATTCCAGTGCTACCTCAAGGATGCCTATGACA...AGTATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR-3UTR GCA 90 bp | AACTGTACAGGACTATGTGGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTCACAGCGCTCCTGTCTaGAGGAAGCAAGAATTCCAG | + |
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Preference number: 2 (lower is better) Translates to: NCTGLCGERDMARARVCSHSAPV*RKQEFQ Trigger: CTGGAATTCTTGCTTCCTGCAGACAGGAGCGCTGTG...ACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTACAGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTAAGGTGAACTGTGTCTaGGCAGGTTGGGCTAAGGAA | + |
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Preference number: 2 (lower is better) Translates to: TPECLFLGVQEVPEGSLCKVNCV*AGWAKE Trigger: TTCCTTAGCCCAACCTGCCCAGACACAGTTCACCTT...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR GCA 90 bp | ATGTGGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTTCTATCCCTCAACCACAACTCATGAGGGCTaGTGGCAATCAGATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MWGAGYGQGQSLQFYPSTTTHEG*WQSDQR Trigger: CCTTTGATCTGATTGCCAGCAGCCCTCATGAGTTGT...GGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTGGGGATCAACCCTCCACTGGTaGAGGCCCACAAAAGCACAG | + |
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Preference number: 2 (lower is better) Translates to: QPLRIQSYSLKLYRTMWGSTLHW*RPTKAQ Trigger: CTGTGCTTTTGTGGGCCTGCACCAGTGGAGGGTTGA...TCCCCACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTGGGGAGTCACACCTGTGCCTTaGAACACCAGAAAAGCGGGT | + |
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Preference number: 2 (lower is better) Translates to: QPLRIQSYSLKLYRTMWGVTPVP*NTRKAG Trigger: ACCCGCTTTTCTGGTGTTGCAAGGCACAGGTGTGAC...TCCCCACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR GCA 90 bp | CAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTGGGGATCAGGGTCACACCTGTaGCTTGCAACACCAGAAAAG | + |
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Preference number: 2 (lower is better) Translates to: QPLRIQSYSLKLYRTMWGSGSHL*LATPEK Trigger: CTTTTCTGGTGTTGCAAGGCACAGGTGTGACCCTGA...TCCCCACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR GCA 90 bp | CTTTTCAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTGCCAGGGCCAGAGTTTaGAGTTCTATCCCTCAACCC | + |
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Preference number: 2 (lower is better) Translates to: LFNHSEFKATASNCTGLCARARV*SSIPQP Trigger: GGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGC...ACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTGAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR-3UTR CCA 90 bp | TCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATGGCCTCTTAAAAGCCAGATTTAATCCCAGCACTTaGGAGGCAGAGGTGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SCMSLFALFQIYGLLKARFNPST*EAEVGR Trigger: TCTACCCACCTCTGCCTCCCAAGTGCTGGGATTAAA...TCTGGCTTTTAAGAGGCCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| 3UTR-3UTR TCA 90 bp | TCCTCCCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATGGAATAGTTGCTACGCTTaGGTCTGGGTTCCACAACTC | + |
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Preference number: 2 (lower is better) Translates to: SSLQIFLHVPLCSLSNLWNSCYA*VWVPQL Trigger: GAGTTGTGGAACCCAGACTCAAGCGTAGCAACTATT...CCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| 3UTR-3UTR CCA 90 bp | CCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATGGCCTCTACAGCCAGGGCTACATaGAGAAACCCTATCTCAAAC | + |
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Preference number: 2 (lower is better) Translates to: PTNFPACPSLLSFKFMASTARAT*RNPISN Trigger: GTTTGAGATAGGGTTTCTCCATGTAGCCCTGGCTGT...AGAGGCCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCCTCCCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATCACAACTCCGTATTGTaGTCTGTTGTAGTTTTCTGC | + |
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Preference number: 2 (lower is better) Translates to: FPPYKFSCMSLFALFQIYHNSVL*SVVVFC Trigger: GCAGAAAACTACAACAGATCACAATACGGAGTTGTG...ATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| 3UTR TCA 72 bp | GAGTGGAGTACGAGCGGGTGGGCAAGGCTCCTGCGGTaGCTAGGCCGGATGGTGGAAGAGGCTGCCAGTGCG | + |
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Preference number: 3 (lower is better) Translates to: EWSTSGWARLLR*LGRMVEEAASA Trigger: CGCACTGGCAGCCTCTTCCACCATCCGGCCTAGTCACCGCAGGAGCCTTGCCCACCCGCTCGTACTCCACTC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR TCA 72 bp | CCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTaGCCAGACGACCATCTTGGGCACTGTTCCTCAGGA | + |
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Preference number: 3 (lower is better) Translates to: PWGTGSPRGQPL*PDDHLGHCSSG Trigger: TCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR CCA 72 bp | GGCCAGAGTTTGCAGTTCTATCCCTCAACCCTCCACTaGTGCAGGCCCACAAAAGCACAGCGCTCCTGTCTG | + |
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Preference number: 3 (lower is better) Translates to: GQSLQFYPSTLH*CRPTKAQRSCL Trigger: CAGACAGGAGCGCTGTGCTTTTGTGGGCCTGCACCAGTGGAGGGTTGAGGGATAGAACTGCAAACTCTGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR TCA 72 bp | CAGGATGCAGGCCTATCTCCTTCATCCTGCACAACGTaGAGTGCACGGTGTCCTCGTTGTGGGAAGCCACCA | + |
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Preference number: 3 (lower is better) Translates to: QDAGLSPSSCTT*SARCPRCGKPP Trigger: TGGTGGCTTCCCACAACGAGGACACCGTGCACTTCACGTTGTGCAGGATGAAGGAGATAGGCCTGCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| 3UTR CCA 72 bp | TCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTaGGCACTGTTCCTCAGGAGCTGTCCACTGATGAAA | + |
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Preference number: 3 (lower is better) Translates to: SQRAASVTRRPS*ALFLRSCPLMK Trigger: TTTCATCAGTGGACAGCTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR-3UTR CAA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTAGACCAGACGACCATCTaGGGCACTGTTCCTCAGGAG | + |
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Preference number: 3 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLDQTTI*GTVPQE Trigger: CTCCTGAGGAACAGTGCCCAAGATGGTCGTCTGGTC...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR GCA 72 bp | ACTGGTGCAGGCCCACAAAAGCACAGCGCTCCTGTCTaGAGGAAGCAAGAATTCCAGGCACAACTCATGAGG | + |
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Preference number: 3 (lower is better) Translates to: TGAGPQKHSAPV*RKQEFQAQLMR Trigger: CCTCATGAGTTGTGCCTGGAATTCTTGCTTCCTGCAGACAGGAGCGCTGTGCTTTTGTGGGCCTGCACCAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR CCA 72 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTaGCAGAAGGTTAATCCTGGACTAGGGCTCTGTAAC | + |
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Preference number: 3 (lower is better) Translates to: VLCPVQGRWVRP*QKVNPGLGLCN Trigger: GTTACAGAGCCCTAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| 3UTR CCA 72 bp | CCTCAAACTGTACAGGACTATGTGGGGAGCGGGATATaGCCAGGGCCAGAGTTTGCAGTTCTATCCCTCAAC | + |
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Preference number: 3 (lower is better) Translates to: PQTVQDYVGSGI*PGPEFAVLSLN Trigger: GTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGTCCTGTACAGTTTGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR TCA 72 bp | CTGTCTGCAGGAAGCAAGAATTCCAGGCACAACTCATaGGGGCTGCTGGCAATCAGATCAAAGGCTCTCCCA | + |
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Preference number: 3 (lower is better) Translates to: LSAGSKNSRHNS*GLLAIRSKALP Trigger: TGGGAGAGCCTTTGATCTGATTGCCAGCAGCCCTCATGAGTTGTGCCTGGAATTCTTGCTTCCTGCAGACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| 3UTR CCA 72 bp | GAAGCAAGAATTCCAGGCACAACTCATGAGGGCTGCTaGCAATCAGATCAAAGGCTCTCCCAGTCTTGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: EARIPGTTHEGC*QSDQRLSQSWP Trigger: TGGCCAAGACTGGGAGAGCCTTTGATCTGATTGCCAGCAGCCCTCATGAGTTGTGCCTGGAATTCTTGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
||
| 3UTR CCA 72 bp | CCAGAATTAGTAGCATGCACCTTTAATCCCAGCACTTaGGAGGCAGAGGTGGGTAGATCTCTGAACCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: PELVACTFNPST*EAEVGRSLNQR Trigger: CCTCTGGTTCAGAGATCTACCCACCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGCATGCTACTAATTCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTCCCAACTCCGCCGGCTaGGATACGCCTCCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVPNSAG*DTPPAC Trigger: ACACGCAGGAGGCGTATCGCAGCCGGCGGAGTTGGG...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003620.13 |
||
| CDS-3UTR GCA 90 bp | TGGGAGGCAGAGGTGGGTAGATCTCTGAACCAGAGGCTGGCCTGGTCTACAGAGCCCAACTCCGCCGGCTaGGATACGCCTCCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: WEAEVGRSLNQRLAWSTEPNSAG*DTPPAC Trigger: ACACGCAGGAGGCGTATCGCAGCCGGCGGAGTTGGG...CTCTGTAGACCAGGCCAGCCTCTGGTTCAGAGATCTACCCACCTCTGCCTCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR GCA 90 bp | GTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCCCAAGCTGCAGTGCGCAGCCGCCTaGGGAGCTCCTGCCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VNCVWAGWAKEPQPNPKLQCAAA*GAPAIA Trigger: TGCTATGGCAGGAGCTCCGCAGGCGGCTGCGCACTG...CAGCTTGGGATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTGGAAGAGGCTGCCAGTaGGCAGCCGCCTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TPECLFLGVQEVPEGSLCGRGCQ*AAACGA Trigger: AGCTCCGCAGGCGGCTGCGCACTGGCAGCCTCTTCC...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GGCACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATAGGACCACCAAGTGCCTaGAGAGCCGGGTCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GTAGQVREYLHHRAIGHIGPPSA*RAGSCC Trigger: ACAGCAGGACCCGGCTCTCCAGGCACTTGGTGGTCC...TATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGTGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTCCAGGGTCAGGCGGCTaGTGGCTGGTTGGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVPGSGG*WLVGSS Trigger: GCTACTTCCAACCAGCCATCAGCCGCCTGACCCTGG...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTTTGGGGACCACCAAGTaGCTGGAGAGCCGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTLGTTK*LESRVL Trigger: CAGGACCCGGCTCTCCAGGCACTTGGTGGTCCCCAA...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATACTTTGGGGACCACCAAGTaGCTGGAGAGCCGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: HGGTGKGVPPSQGHRAHTLGTTK*LESRVL Trigger: CAGGACCCGGCTCTCCAGGCACTTGGTGGTCCCCAA...AGTATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTAGGAAGAGGCTGCCAGTaGGCAGCCGCCTGCGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLGRGCQ*AAACGA Trigger: AGCTCCGCAGGCGGCTGCGCACTGGCAGCCTCTTCC...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGGCCAGTCTGCACATTaGGGACCACCAAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTGQSAH*GPPSAW Trigger: CCAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCC...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTGGCCAGTCTGCACATTaGGGACCACCAAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVGQSAH*GPPSAW Trigger: CCAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCC...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCCAGGGTCAGGCGGCTaGTGGCTGGTTGGAAGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPPGSGG*WLVGSS Trigger: GCTACTTCCAACCAGCCATCAGCCGCCTGACCCTGG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTCGATCTCTGCTGCCCTaGCACGCTCTTGGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: TPECLFLGVQEVPEGSLCRSLLP*HALGPC Trigger: ACATGGCCCAAGAGCGTGTCAGGGCAGCAGAGATCG...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCCCAAGCTGTGTCCGAAGCACACCTaGCCATCAGCAGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: VNCVWAGWAKEPQPNPKLCPKHT*PSAGCR Trigger: CCTGCATCCTGCTGATGGTCAGGTGTGCTTCGGACA...CAGCTTGGGATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTTGTCCGAAGCACACCTaGCCATCAGCAGGATGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVCPKHT*PSAGCR Trigger: CCTGCATCCTGCTGATGGTCAGGTGTGCTTCGGACA...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTACAGTGCGCAGCCGCCTaGGGAGCTCCTGCCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLQCAAA*GAPAIA Trigger: TGCTATGGCAGGAGCTCCGCAGGCGGCTGCGCACTG...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACCACCAAGTGCCTaGAGAGCCGGGTCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPGPPSA*RAGSCC Trigger: ACAGCAGGACCCGGCTCTCCAGGCACTTGGTGGTCC...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | ACGGCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATACTTGGCCAGTCTGCACATTaGGGACCACCAAGTGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TAGQVREYLHHRAIGHILGQSAH*GPPSAW Trigger: CCAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCC...AAGTATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGCCGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGCCTGGTCAGCACGTCTaGGAACTGCAGCAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: YRKSQRAASVTRRPSWALPGQHV*ELQQKL Trigger: CAGTTTCTGCTGCAGTTCTCAGACGTGCTGACCAGG...CAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTATTGGGGACCACCAAGTaGCTGGAGAGCCGGGTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLLGTTK*LESRVL Trigger: CAGGACCCGGCTCTCCAGGCACTTGGTGGTCCCCAA...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTCTGCCTTGGTGCTGTaGTTCAGCTCCTCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PTPECLFLGVQEVPEGSLSALVL*FSSSRT Trigger: TGTTCTGGAGGAGCTGAAGCACAGCACCAAGGCAGA...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCAGCTTCCTGGCAACTTaGAACAACTGCTCGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: PTPECLFLGVQEVPEGSLSFLAT*NNCSWC Trigger: GCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCT...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000003620.13 |
||
| CDS-3UTR CCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTTTTGCGATGCTGTCCTaGAGCACCGCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPFAMLS*STATSS Trigger: GCTGGAGGTGGCGGTGCTCCAGGACAGCATCGCAAA...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| 3UTR CAA 72 bp | ACTATGTGGGGAGCGGGATATGGCCAGGGCCAGAGTTaGCAGTTCTATCCCTCAACCCTCCACTGGTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TMWGAGYGQGQS*QFYPSTLHWCR Trigger: CCTGCACCAGTGGAGGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCACATAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
||
| CDS-3UTR TCA 90 bp | TACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGCTCCACCTGAGGCCTTaGTGCACTGCAGTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRKSQRAASVTRRPSWALLHLRP*CTAVSS Trigger: AGAACTTACTGCAGTGCATCAAGGCCTCAGGTGGAG...CAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTTGCTCTGCAGCCATTTaGTGGAAGAACCGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTCSAAI*WKNRLH Trigger: GTGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCA...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGCTGTTCCTGGGCTTaGGGTTTGGTTGAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPGCSWA*GLVERA Trigger: TGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCC...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003620.13 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCTGCGATACGCCTCCTaGGTGTTGGTGAAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPLRYAS*VLVKST Trigger: CGTGGACTTCACCAACACGCAGGAGGCGTATCGCAG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000003620.13 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTATGACTCCATCTCTTTaGGCTCCGCCTCCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPMTPSL*APPPQG Trigger: GCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCAT...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTTCTGCCTTGGTGCTGTaGTTCAGCTCCTCCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVSALVL*FSSSRT Trigger: TGTTCTGGAGGAGCTGAAGCACAGCACCAAGGCAGA...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTCTGCACAACGTGAAGTaGACGGTGTCCTCGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: TPECLFLGVQEVPEGSLCLHNVK*TVSSLW Trigger: CCACAACGAGGACACCGTGCACTTCACGTTGTGCAG...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAGCGGGATATGGCCAGGGCCAGAGTTTGCAGTTCTATCCCTCAACCCTAGCTTCCTGGCAACTTaGAACAACTGCTCGTGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGSGIWPGPEFAVLSLNPSFLAT*NNCSWC Trigger: GCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCT...AGGGTTGAGGGATAGAACTGCAAACTCTGGCCCTGGCCATATCCCGCTCCCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
||
| CDS-3UTR CCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCCACACTTGGCTTCATTaGCATAGAAGTAGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PTPECLFLGVQEVPEGSLHTWLH*HRSRCG Trigger: CCCGCACCTACTTCTATGCCAATGAAGCCAAGTGTG...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTATTTGCGATGCTGTCCTaGAGCACCGCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLFAMLS*STATSS Trigger: GCTGGAGGTGGCGGTGCTCCAGGACAGCATCGCAAA...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | CATAAAAAGGTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATGGACCACCAAGTGCCTaGAGAGCCGGGTCCTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: HKKVNCVWAGWAKEPQPNGPPSA*RAGSCC Trigger: ACAGCAGGACCCGGCTCTCCAGGCACTTGGTGGTCC...ATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCACCTTTTTATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTTGCTTCAGAAGTGCATaGCTCCATCTCTTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVCFRSA*LHLFAL Trigger: GAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCA...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCCTGGTCAGCACGTCTaGGAACTGCAGCAGAAACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPPGQHV*ELQQKL Trigger: CAGTTTCTGCTGCAGTTCTCAGACGTGCTGACCAGG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | CATAAAAAGGTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCGATCTCTGCTGCCCTaGCACGCTCTTGGGCCATGT | + |
|
Preference number: 4 (lower is better) Translates to: HKKVNCVWAGWAKEPQPNRSLLP*HALGPC Trigger: ACATGGCCCAAGAGCGTGTCAGGGCAGCAGAGATCG...ATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCACCTTTTTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTAATGACTCCATCTCTTTaGGCTCCGCCTCCTCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLMTPSL*APPPQG Trigger: GCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCAT...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCCACACCTGCCTCTTTTaGTTTCTTGGCCAGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: PTPECLFLGVQEVPEGSLHTCLF*FLGQYI Trigger: GATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTG...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCTGCACAACGTGAAGTaGACGGTGTCCTCGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPLHNVK*TVSSLW Trigger: CCACAACGAGGACACCGTGCACTTCACGTTGTGCAG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCTGCAGCAGAAACTGTaGTCTCCCCAGTGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPLQQKL*SPQCSE Trigger: CTCACTGCACTGGGGAGACCACAGTTTCTGCTGCAG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTACAGGCGGCTGATGGCTaGTTGGAAGTAGCTCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLQAADG*LEVALL Trigger: GAGCAGAGCTACTTCCAACCAGCCATCAGCCGCCTG...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCTCCACCTGAGGCCTTaGTGCACTGCAGTAAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPLHLRP*CTAVSS Trigger: AGAACTTACTGCAGTGCATCAAGGCCTCAGGTGGAG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTCTTCTCCCTCTTATTTaGTCCACTGCCATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTLLPLI*STAISL Trigger: GAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAG...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTAGCACGTCTGAGAACTaGAGCAGAAACTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPECLFLGVQEVPEGSLCSTSEN*SRNCGL Trigger: GAGACCACAGTTTCTGCTGCAGTTCTCAGACGTGCT...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTCACACCTGCCTCTTTTaGTTTCTTGGCCAGTACATC | + |
|
Preference number: 4 (lower is better) Translates to: QEVPEGSLCDQTTILGTVHTCLF*FLGQYI Trigger: GATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTG...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTTGCTTCAGAAGTGCATaGCTCCATCTCTTTGCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPCFRSA*LHLFAL Trigger: GAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCA...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTAGTGAGCTTAATGGCTaGGAAACCACCATCACTGGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPSELNG*ETTITG Trigger: GCCAGTGATGGTGGTTTCTCAGCCATTAAGCTCACT...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | TACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTCTCTGCTTCAGAAGTaGATGACTCCATCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: YRKSQRAASVTRRPSWALSLLQK*MTPSLC Trigger: GCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGA...CAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTCTTCTCCCTCTTATTTaGTCCACTGCCATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: TPECLFLGVQEVPEGSLCLLPLI*STAISL Trigger: GAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAG...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTAGCACGTCTGAGAACTaGAGCAGAAACTGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPSTSEN*SRNCGL Trigger: GAGACCACAGTTTCTGCTGCAGTTCTCAGACGTGCT...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTCACACTTGGCTTCATTaGCATAGAAGTAGGTGCGGG | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPHTWLH*HRSRCG Trigger: CCCGCACCTACTTCTATGCCAATGAAGCCAAGTGTG...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | CATAAAAAGGTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCTGCAGCAGAAACTGTaGTCTCCCCAGTGCAGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: HKKVNCVWAGWAKEPQPNLQQKL*SPQCSE Trigger: CTCACTGCACTGGGGAGACCACAGTTTCTGCTGCAG...ATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCACCTTTTTATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | TACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGCCTCTTTTGCTTTCTTaGCCAGTACATCCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: YRKSQRAASVTRRPSWALPLLLS*PVHPSS Trigger: AGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGG...CAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTCCTCTTTTGCTTTCTTaGCCAGTACATCCATCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTPLLLS*PVHPSS Trigger: AGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGG...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTTGTCATAGGCATCCTTaGGGTAGCACTGGAATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPCHRHP*GSTGMC Trigger: ACACATTCCAGTGCTACCTCAAGGATGCCTATGACA...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTCCCAACTCCGCCGGCTaGGATACGCCTCCTGCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: LFNHSEFKATASNCTGLCPNSAG*DTPPAC Trigger: ACACGCAGGAGGCGTATCGCAGCCGGCGGAGTTGGG...ACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTGAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
||
| CDS-3UTR GCA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTTCTCTGCTTCAGAAGTaGATGACTCCATCTCTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPSLLQK*MTPSLC Trigger: GCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGA...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CCA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTTGTAGTTGTCACACTTaGCTTCATTGGCATAGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: VQEVPEGSLCDQTTILGTCSCHT*LHWHRS Trigger: ACTTCTATGCCAATGAAGCCAAGTGTGACAACTACA...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCCTCCCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAAGGCTGTTCCTGGGCTTaGGGTTTGGTTGAGAGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: ILFLPTNFPACPSLLSFKGCSWA*GLVERA Trigger: TGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCC...TTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGAAAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTCAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATGTCTGCGATACGCCTCCTaGGTGTTGGTGAAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: LFNHSEFKATASNCTGLCLRYAS*VLVKST Trigger: CGTGGACTTCACCAACACGCAGGAGGCGTATCGCAG...ACATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTGAAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
||
| CDS-3UTR GCA 90 bp | ATCCTTTTCCTCCCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAACTGCGATACGCCTCCTaGGTGTTGGTGAAGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: ILFLPTNFPACPSLLSFKLRYAS*VLVKST Trigger: CGTGGACTTCACCAACACGCAGGAGGCGTATCGCAG...TTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGAAAAGGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR TCA 90 bp | CCTTCATCCTTTTCCTCCCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTTCCTTGATGCAGGGTaGGGACTCCTCTTATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PSSFSSLQIFLHVPLCSLFLDAG*GLLLSA Trigger: AGCAGATAAGAGGAGTCCTCACCCTGCATCAAGGAA...AAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGGGAGGAAAAGGATGAAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR TCA 90 bp | CTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATGGCCTCTTAAAGAGAAGTTTCCTTaGTGCAGGGTGAGGACTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQIFLHVPLCSLSNLWPLKEKFP*CRVRTP Trigger: AGGAGTCCTCACCCTGCATCAAGGAAACTTCTCTTT...AAGAGGCCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
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| CDS-3UTR CAA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCGGCGGCCGCACAGCCTaGGCCGCCCCACATCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTPECLFLGVQEVPEGSLGGRTA*AAPHPR Trigger: TCGGGGATGTGGGGCGGCCAAGGCTGTGCGGCCGCC...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000003620.13 |
||
| CDS GCA 90 bp | CTTTGCCCCAGAAGCTTCCTGGCAACTTGGAACAACTGCTCGTGGTaGGCTAGCAGCACCGGCGACGCACACAGCCGCAGCACTAGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LCPRSFLATWNNCSW*ASSTGDAHSRSTSR Trigger: CCTGCTAGTGCTGCGGCTGTGTGCGTCGCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS GCA 90 bp | TCGAACATCCTTTGCCCCAGAAGCTTCCTGGCAACTTGGAACAACTaGTCGTGGTGCGCTAGCAGCACCGGCGACGCACACAGCCGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SNILCPRSFLATWNN*SWCASSTGDAHSRS Trigger: GCTGCGGCTGTGTGCGTCGCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS CCA 90 bp | ATCCTTTGCCCCAGAAGCTTCCTGGCAACTTGGAACAACTGCTCGTaGTGCGCTAGCAGCACCGGCGACGCACACAGCCGCAGCACTAGC | + |
|
Preference number: 5 (lower is better) Translates to: ILCPRSFLATWNNCS*CASSTGDAHSRSTS Trigger: GCTAGTGCTGCGGCTGTGTGCGTCGCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS-3UTR CAA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTCCGCCACCTCCAGCTTaGTGTCTACAGCAGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: TPECLFLGVQEVPEGSLCPPPPA*CLQQHA Trigger: GGCGTGCTGCTGTAGACACAAAGCTGGAGGTGGCGG...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS-3UTR CAA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTTGGCCAGTCTGCACATaGGGGACCACCAAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQEVPEGSLCDQTTILGTWPVCT*GTTKCL Trigger: CAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCCA...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS-3UTR CAA 90 bp | GTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCCCAAGCTGGCGGCTGATGGCTGGTaGGAAGTAGCTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VNCVWAGWAKEPQPNPKLAADGW*EVALLS Trigger: GCTGAGCAGAGCTACTTCCAACCAGCCATCAGCCGC...CAGCTTGGGATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS TCA 90 bp | GTGTCTACAGCAGCACGCCCAGCCTGTCCCTGCTCTGCAGCCATTTaGTGGAAGAACCGTCTCCACCTGGTCAGCACGTCTGAGAACTGC | + |
|
Preference number: 5 (lower is better) Translates to: VSTAARPACPCSAAI*WKNRLHLVSTSENC Trigger: GCAGTTCTCAGACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCAGGGACAGGCTGGGCGTGCTGCTGTAGACAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS-3UTR CAA 90 bp | ACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCTGTGCGGCTGATGGCTGGTaGGAAGTAGCTCTGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TPECLFLGVQEVPEGSLCAADGW*EVALLS Trigger: GCTGAGCAGAGCTACTTCCAACCAGCCATCAGCCGC...ACAGAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | GTACAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTACACCAAAGGCTTTGTaGTGCCGGATCAGAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VQEVPEGSLCDQTTILGTTPKAL*CRIRGL Trigger: CAGGCCTCTGATCCGGCACAACAAAGCCTTTGGTGT...AGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTACACCAAAGGCTTTGTaGTGCCGGATCAGAGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: QEVPEGSLCDQTTILGTVTPKAL*CRIRGL Trigger: CAGGCCTCTGATCCGGCACAACAAAGCCTTTGGTGT...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTACCGCCACCTCCAGCTTaGTGTCTACAGCAGCACGCC | + |
|
Preference number: 5 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLPPPPA*CLQQHA Trigger: GGCGTGCTGCTGTAGACACAAAGCTGGAGGTGGCGG...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTCTGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTTGGCCAGTCTGCACATaGGGGACCACCAAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: VLCPVQGRWVRPWQKVNPWPVCT*GTTKCL Trigger: CAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCCA...AGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCAGAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | GCGGGACAGGTAAGGGAGTACCTCCATCACAGGGCCATAGGGCACATACTTGTATGGCCAGTCTGCACATaGGGGACCACCAAGTGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: AGQVREYLHHRAIGHILVWPVCT*GTTKCL Trigger: CAGGCACTTGGTGGTCCCCAATGTGCAGACTGGCCA...TACAAGTATGTGCCCTATGGCCCTGTGATGGAGGTACTCCCTTACCTGTCCCGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
||
| CDS CCA 90 bp | ATCAATCTCTCGAACATCCTTTGCCCCAGAAGCTTCCTGGCAACTTaGAACAACTGCTCGTGGTGCGCTAGCAGCACCGGCGACGCACAC | + |
|
Preference number: 5 (lower is better) Translates to: INLSNILCPRSFLAT*NNCSWCASSTGDAH Trigger: GTGTGCGTCGCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGAGAGATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTCTGCTCTGCAGCCATTaGATGGAAGAACCGTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QEVPEGSLCDQTTILGTVLLCSH*MEEPSP Trigger: TGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCAG...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | CCCACTCCTGAGTGTCTGTTCCTTGGGGTACAGGAAGTCCCAGAGGGCAGCCTCGCCTCTTTTGCTTTCTaGGCCAGTACATCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: PTPECLFLGVQEVPEGSLASFAF*ASTSIL Trigger: GAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGC...GAGGCTGCCCTCTGGGACTTCCTGTACCCCAAGGAACAGACACTCAGGAGTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | CCTACAAATTTTCCTGCATGTCCCTCTTTGCTCTCTTTCAAATTTATGGCCTCTGGCGGCCGCACAGCCTaGGCCGCCCCACATCCCCGA | + |
|
Preference number: 5 (lower is better) Translates to: PTNFPACPSLLSFKFMASGGRTA*AAPHPR Trigger: TCGGGGATGTGGGGCGGCCAAGGCTGTGCGGCCGCC...AGAGGCCATAAATTTGAAAGAGAGCAAAGAGGGACATGCAGGAAAATTTGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000139861.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAAGTCCCAGAGGGCAGCCTCTGTGACCAGACGACCATCTTGGGCACTGTTGCTTCTCCCTCTTATTaGCTCCACTGCCATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: QEVPEGSLCDQTTILGTVASPSY*LHCHLS Trigger: AGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAGC...AACAGTGCCCAAGATGGTCGTCTGGTCACAGAGGCTGCCCTCTGGGACTTCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | GTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCCCAAGCTGGCTTCTCCCTCTTATTaGCTCCACTGCCATCTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: VNCVWAGWAKEPQPNPKLASPSY*LHCHLS Trigger: AGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAGC...CAGCTTGGGATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
||
| CDS-3UTR CAA 90 bp | GTGAACTGTGTCTGGGCAGGTTGGGCTAAGGAACCCCAGCCCAATCCCAAGCTGGCCTCTTTTGCTTTCTaGGCCAGTACATCCATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VNCVWAGWAKEPQPNPKLASFAF*ASTSIL Trigger: GAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGC...CAGCTTGGGATTGGGCTGGGGTTCCTTAGCCCAACCTGCCCAGACACAGTTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS TCA 90 bp | GCACTGATGACACCATCTCTGCGGTCTCCAAAGGCGGGGTGCACCTaGTACTGCTTCTCCCTCTTATTTGCTCCACTGCCATCTCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: ALMTPSLRSPKAGCT*YCFSLLFAPLPSLS Trigger: AGAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAGCAGTATCAGGTGCACCCCGCCTTTGGAGACCGCAGAGATGGTGTCATCAGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS TCA 90 bp | TGCAGCCATTTGATGGAAGAACCGTCTCCACCTGGTCAGCACGTCTaGGAACTGCAGCAGAAACTGTGGTCTCCCCAGTGCAGTGAGCTT | + |
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Preference number: 5 (lower is better) Translates to: CSHLMEEPSPPGQHV*ELQQKLWSPQCSEL Trigger: AAGCTCACTGCACTGGGGAGACCACAGTTTCTGCTGCAGTTCTCAGACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAAATGGCTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS CCA 90 bp | TCATCTTCATCAATCTCTCGAACATCCTTTGCCCCAGAAGCTTCCTaGCAACTTGGAACAACTGCTCGTGGTGCGCTAGCAGCACCGGCG | + |
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Preference number: 5 (lower is better) Translates to: SSSSISRTSFAPEAS*QLGTTARGALAAPA Trigger: CGCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGAGAGATTGATGAAGATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS TCA 90 bp | CCTCTTATTTGCTCCACTGCCATCTCTCTCTGCTTCAGAAGTGCATaGCTCCATCTCTTTGCGCTCCGCCTCCTCAGGGCTCAGATCTTC | + |
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Preference number: 5 (lower is better) Translates to: PLICSTAISLCFRSA*LHLFALRLLRAQIF Trigger: GAAGATCTGAGCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCAAATAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 90 bp | TCTCCCTCTTATTTGCTCCACTGCCATCTCTCTCTGCTTCAGAAGTaGATGACTCCATCTCTTTGCGCTCCGCCTCCTCAGGGCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SPSYLLHCHLSLLQK*MTPSLCAPPPQGSD Trigger: ATCTGAGCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS-3UTR CAA 90 bp | TGCCCAGTGCAGGGAAGATGGGTTAGACCCTGGCAGAAGGTTAATCCTGGACTACTGCTCTGCAGCCATTaGATGGAAGAACCGTCTCCA | + |
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Preference number: 5 (lower is better) Translates to: CPVQGRWVRPWQKVNPGLLLCSH*MEEPSP Trigger: TGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCAG...TAGTCCAGGATTAACCTTCTGCCAGGGTCTAACCCATCTTCCCTGCACTGGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 90 bp | AGGCGGGGTGCACCTGATACTGCTTCTCCCTCTTATTTGCTCCACTaGCATCTCTCTCTGCTTCAGAAGTGCATGACTCCATCTCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: RRGAPDTASPSYLLH*HLSLLQKCMTPSLC Trigger: GCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAGCAGTATCAGGTGCACCCCGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 90 bp | CGCACACCTGCCTCTTTTGCTTTCTTGGCCAGTACATCCATCCTCTaGAGCATCCTTTTCATCTGCTGCTCTTCCTCCTCAGTGAACCGT | + |
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Preference number: 5 (lower is better) Translates to: RTPASFAFLASTSIL*SILFICCSSSSVNR Trigger: ACGGTTCACTGAGGAGGAAGAGCAGCAGATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS CCA 90 bp | GCTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTTGCTTTCTTaGCCAGTACATCCATCCTCTGCAGCATCCTTTTCATCTGCTGCT | + |
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Preference number: 5 (lower is better) Translates to: AQHQSSGAHLPLLLS*PVHPSSAASFSSAA Trigger: AGCAGCAGATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS GCA 90 bp | GTAGCTCTGCTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTTaGTTTCTTGGCCAGTACATCCATCCTCTGCAGCATCCTTTTCAT | + |
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Preference number: 5 (lower is better) Translates to: VALLSINHQAHTCLF*FLGQYIHPLQHPFH Trigger: ATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAGCAGAGCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS-3UTR CAA 90 bp | TACTTTTCAACCACTCAGAATTCAAAGCTACAGCCTCAAACTGTACAGGACTATACACCAAAGGCTTTGTaGTGCCGGATCAGAGGCCTG | + |
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Preference number: 5 (lower is better) Translates to: YFSTTQNSKLQPQTVQDYTPKAL*CRIRGL Trigger: CAGGCCTCTGATCCGGCACAACAAAGCCTTTGGTGT...ATAGTCCTGTACAGTTTGAGGCTGTAGCTTTGAATTCTGAGTGGTTGAAAAGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132241.2 |
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| CDS TCA 72 bp | GCTCGCGGGAGGCTGTTCCTGGGCTTGCGGTTTGGTTaGGAGGGCAGCGACGCGTGGTGCCACCGACCGCAG | + |
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Preference number: 6 (lower is better) Translates to: ARGRLFLGLRFG*EGSDAWCHRPQ Trigger: CTGCGGTCGGTGGCACCACGCGTCGCTGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCCTCCCGCGAGC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000139861.2 |
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| CDS CCA 72 bp | CAGGGCTCGCGGGAGGCTGTTCCTGGGCTTGCGGTTTaGTTGAGAGGGCAGCGACGCGTGGTGCCACCGACC | + |
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Preference number: 6 (lower is better) Translates to: QGSREAVPGLAV*LRGQRRVVPPT Trigger: GGTCGGTGGCACCACGCGTCGCTGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCCTCCCGCGAGCCCTG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000139861.2 |
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| CDS CAA 72 bp | GGCTCGCGGGAGGCTGTTCCTGGGCTTGCGGTTTGGTaGAGAGGGCAGCGACGCGTGGTGCCACCGACCGCA | + |
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Preference number: 6 (lower is better) Translates to: GSREAVPGLAVW*RGQRRVVPPTA Trigger: TGCGGTCGGTGGCACCACGCGTCGCTGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCCTCCCGCGAGCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000139861.2 |
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| CDS GCA 72 bp | AGAGCCTCAGGGCTCGCGGGAGGCTGTTCCTGGGCTTaGGGTTTGGTTGAGAGGGCAGCGACGCGTGGTGCC | + |
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Preference number: 6 (lower is better) Translates to: RASGLAGGCSWA*GLVERAATRGA Trigger: GGCACCACGCGTCGCTGCCCTCTCAACCAAACCGCAAGCCCAGGAACAGCCTCCCGCGAGCCCTGAGGCTCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000139861.2 |
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| CDS TCA 72 bp | GCAGCACGCCCAGCCTGTCCCTGCTCTGCAGCCATTTaGTGGAAGAACCGTCTCCACCTGGTCAGCACGTCT | + |
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Preference number: 6 (lower is better) Translates to: AARPACPCSAAI*WKNRLHLVSTS Trigger: AGACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCAGGGACAGGCTGGGCGTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS CCA 72 bp | TCAGGCGCACACCTGCCTCTTTTGCTTTCTGCACATTaGGGACCACCAAGTGCCTGGAGAGCCGGGTCCTGC | + |
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Preference number: 6 (lower is better) Translates to: SGAHLPLLLSAH*GPPSAWRAGSC Trigger: GCAGGACCCGGCTCTCCAGGCACTTGGTGGTCCCCAATGTGCAGAAAGCAAAAGAGGCAGGTGTGCGCCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126087.2 |
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| CDS CAA 72 bp | AGCAGCACGCCCAGCCTGTCCCTGCTCTGCAGCCATTaGATGGAAGAACCGTCTCCACCTGGTCAGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: SSTPSLSLLCSH*MEEPSPPGQHV Trigger: GACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAAATGGCTGCAGAGCAGGGACAGGCTGGGCGTGCTGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS CCA 72 bp | TCGAACATCCTTTGCCCCAGAAGCTTCCTGGCAACTTaGAACAACTGCTCGTGGTGCGCTAGCAGCACCGGC | + |
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Preference number: 6 (lower is better) Translates to: SNILCPRSFLAT*NNCSWCASSTG Trigger: GCCGGTGCTGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS TCA 72 bp | TGCTCCACTGCCATCTCTCTCTGCTTCAGAAGTGCATaGCTCCATCTCTTTGCGCTCCGCCTCCTCAGGGCT | + |
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Preference number: 6 (lower is better) Translates to: CSTAISLCFRSA*LHLFALRLLRA Trigger: AGCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS TCA 72 bp | ACACCATCTCTGCGGTCTCCAAAGGCGGGGTGCACCTaGTACTGCTTCTCCCTCTTATTTGCTCCACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: TPSLRSPKAGCT*YCFSLLFAPLP Trigger: TGGCAGTGGAGCAAATAAGAGGGAGAAGCAGTATCAGGTGCACCCCGCCTTTGGAGACCGCAGAGATGGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS TCA 72 bp | TTGATGGAAGAACCGTCTCCACCTGGTCAGCACGTCTaGGAACTGCAGCAGAAACTGTGGTCTCCCCAGTGC | + |
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Preference number: 6 (lower is better) Translates to: LMEEPSPPGQHV*ELQQKLWSPQC Trigger: GCACTGGGGAGACCACAGTTTCTGCTGCAGTTCTCAGACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 72 bp | CTCTCTCTGCTTCAGAAGTGCATGACTCCATCTCTTTaGGCTCCGCCTCCTCAGGGCTCAGATCTTCCTCCA | + |
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Preference number: 6 (lower is better) Translates to: LSLLQKCMTPSL*APPPQGSDLPP Trigger: TGGAGGAAGATCTGAGCCCTGAGGAGGCGGAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 72 bp | CAGGCGGCTGATGGCTTGGCCAGTACATCCATCCTCTaGAGCATCCTTTTCATCTGCTGCTCTTCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: QAADGLASTSIL*SILFICCSSSS Trigger: TGAGGAGGAAGAGCAGCAGATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGCCATCAGCCGCCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000141635.8 |
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| CDS CAA 72 bp | GCTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTaGCTTTCTGCACATTGGGGACCACCAAGTGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: AQHQSSGAHLPL*LSAHWGPPSAW Trigger: CCAGGCACTTGGTGGTCCCCAATGTGCAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000126087.2 |
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| CDS GCA 72 bp | CTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTTaGTTTCTGCACATTGGGGACCACCAAGTGCCTGGA | + |
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Preference number: 6 (lower is better) Translates to: LSINHQAHTCLF*FLHIGDHQVPG Trigger: TCCAGGCACTTGGTGGTCCCCAATGTGCAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126087.2 |
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| CDS CCA 72 bp | GCTCTGCAGCCATTTGATGGAAGAACCGTCTCCACCTaGTCAGCACGTCTGAGAACTGCAGCAGAAACTGTG | + |
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Preference number: 6 (lower is better) Translates to: ALQPFDGRTVST*SARLRTAAETV Trigger: CACAGTTTCTGCTGCAGTTCTCAGACGTGCTGACCAGGTGGAGACGGTTCTTCCATCAAATGGCTGCAGAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 72 bp | TATTTGCTCCACTGCCATCTCTCTCTGCTTCAGAAGTaGATGACTCCATCTCTTTGCGCTCCGCCTCCTCAG | + |
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Preference number: 6 (lower is better) Translates to: YLLHCHLSLLQK*MTPSLCAPPPQ Trigger: CTGAGGAGGCGGAGCGCAAAGAGATGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCAAATA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 72 bp | GTAGCTCTGCTCAGCATCAATCATCAGGCGCACACCTaGCTCTTTTGCTTTCTGCACATTGGGGACCACCAA | + |
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Preference number: 6 (lower is better) Translates to: VALLSINHQAHT*LFCFLHIGDHQ Trigger: TTGGTGGTCCCCAATGTGCAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAGCAGAGCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000126087.2 |
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| CDS CCA 72 bp | TCAATCTCTCGAACATCCTTTGCCCCAGAAGCTTCCTaGCAACTTGGAACAACTGCTCGTGGTGCGCTAGCA | + |
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Preference number: 6 (lower is better) Translates to: SISRTSFAPEAS*QLGTTARGALA Trigger: TGCTAGCGCACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGAGAGATTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS CAA 90 bp | TGCTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTTGCTTTCTaGGCCAGTACATCCATCCTCTGCAGCATCCTTTTCATCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CSASIIRRTPASFAF*ASTSILCSILFICC Trigger: GCAGCAGATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS GCA 72 bp | CTCAGCATCAATCATCAGGCGCACACCTGCCTCTTTTaGTTTCTTGGCCAGTACATCCATCCTCTGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LSINHQAHTCLF*FLGQYIHPLQH Trigger: ATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTGATGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS GCA 72 bp | GCACCTGATACTGCTTCTCCCTCTTATTTGCTCCACTaGCATCTCTCTCTGCTTCAGAAGTGCATGACTCCA | + |
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Preference number: 6 (lower is better) Translates to: APDTASPSYLLH*HLSLLQKCMTP Trigger: TGGAGTCATGCACTTCTGAAGCAGAGAGAGATGGCAGTGGAGCAAATAAGAGGGAGAAGCAGTATCAGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 |
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| CDS GCA 72 bp | GCCTCTTTTGCTTTCTTGGCCAGTACATCCATCCTCTaGAGCATCCTTTTCATCTGCTGCTCTTCCTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: ASFAFLASTSIL*SILFICCSSSS Trigger: TGAGGAGGAAGAGCAGCAGATGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS CCA 72 bp | CAATCATCAGGCGCACACCTGCCTCTTTTGCTTTCTTaGCCAGTACATCCATCCTCTGCAGCATCCTTTTCA | + |
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Preference number: 6 (lower is better) Translates to: QSSGAHLPLLLS*PVHPSSAASFS Trigger: TGAAAAGGATGCTGCAGAGGATGGATGTACTGGCCAAGAAAGCAAAAGAGGCAGGTGTGCGCCTGATGATTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003620.13 ENSMUST00000136776.8 ENSMUST00000232554.2 |
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| CDS CAA 90 bp | AAAATGGCCATAGAAGGTCATCTTCATCAATCTCTCGAACATCCTTaGCCCCAGAAGCTTCCTGGCAACTTGGAACAACTGCTCGTGGTG | + |
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Preference number: 6 (lower is better) Translates to: KMAIEGHLHQSLEHP*PQKLPGNLEQLLVV Trigger: CACCACGAGCAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGAGAGATTGATGAAGATGACCTTCTATGGCCATTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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| CDS CAA 72 bp | ATAGAAGGTCATCTTCATCAATCTCTCGAACATCCTTaGCCCCAGAAGCTTCCTGGCAACTTGGAACAACTG | + |
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Preference number: 6 (lower is better) Translates to: IEGHLHQSLEHP*PQKLPGNLEQL Trigger: CAGTTGTTCCAAGTTGCCAGGAAGCTTCTGGGGCAAAGGATGTTCGAGAGATTGATGAAGATGACCTTCTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003620.13 ENSMUST00000132241.2 |
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