Pregenerated sensors for PROCR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027611Ensembl transcript IDs: ENSMUST00000029140.12, ENSMUST00000132608.2
Found 47 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCACTGCTCCCATATTGTTCAACCTCACAACGGTGATATTTCTGTaGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTGGA | + |
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Preference number: 1 (lower is better) Translates to: FTAPILFNLTTVIFL*FFLPCHSSVPSQVG Trigger: TCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAATATCACCGTTGTGAGGTTGAACAATATGGGAGCAGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CCA 90 bp | TCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTaGATACACCTGGACACATTAACTATGTTTGATTTTGGTTACAGA | + |
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Preference number: 1 (lower is better) Translates to: SVVLSSLSFQCPFPS*IHLDTLTMFDFGYR Trigger: TCTGTAACCAAAATCAAACATAGTTAATGTGTCCAGGTGTATCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR TCA 90 bp | ATATTTATGAATTCACTGCTCCCATATTGTTCAACCTCACAACGGTaGTATTTCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTT | + |
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Preference number: 1 (lower is better) Translates to: IFMNSLLPYCSTSQR*YFCGSFFPVIPVSL Trigger: AAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAATATCACCGTTGTGAGGTTGAACAATATGGGAGCAGTGAATTCATAAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CAA 90 bp | CACTTCTCAGACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTaGCAAACCCGTTACTTTGTTGTCTACATACTGCCCCCTCCCACA | + |
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Preference number: 2 (lower is better) Translates to: HFSDQLHKAQMLSSP*QTRYFVVYILPPPT Trigger: TGTGGGAGGGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGTCTGAGAAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR-3UTR TCA 90 bp | TCATTCCAGTGTCCCTTCCCAAGTTGGATACACCTGGACACATTAACTATGTTTCCCAAGTCTATGGTCTaGTTTCCACAATTAAGCACC | + |
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Preference number: 2 (lower is better) Translates to: SFQCPFPSWIHLDTLTMFPKSMV*FPQLST Trigger: GGTGCTTAATTGTGGAAATCAGACCATAGACTTGGG...AAACATAGTTAATGTGTCCAGGTGTATCCAACTTGGGAAGGGACACTGGAATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR-3UTR GCA 90 bp | ATTTCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTGGATATACACAAAGCACAAATaGTCTCAAGTCCTTTGCAAA | + |
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Preference number: 2 (lower is better) Translates to: ISVVLSSLSFQCPFPSWIYTKHK*SQVLCK Trigger: TTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTA...TATCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR TCA 72 bp | GTGATGGCCCACTGGGGGAGTCTGTTTGGCATCATATaGGCTACGACCTTCCCTTACCAGCCCCCACCAGTC | + |
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Preference number: 3 (lower is better) Translates to: VMAHWGSLFGII*ATTFPYQPPPV Trigger: GACTGGTGGGGGCTGGTAAGGGAAGGTCGTAGCTCATATGATGCCAAACAGACTCCCCCAGTGGGCCATCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR TCA 72 bp | AGGCAGACAGACCTGGAGTTGTTGCTTTTAACCTCCTaGGATGTGATGGCCCACTGGGGGAGTCTGTTTGGC | + |
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Preference number: 3 (lower is better) Translates to: RQTDLELLLLTS*DVMAHWGSLFG Trigger: GCCAAACAGACTCCCCCAGTGGGCCATCACATCTCAGGAGGTTAAAAGCAACAACTCCAGGTCTGTCTGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR-3UTR CAA 90 bp | GTGATATTTCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTACTGGGGGAGTCTGTTaGGCATCATATGAGCTACGA | + |
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Preference number: 3 (lower is better) Translates to: VIFLWFFLPCHSSVPSQVTGGVC*ASYELR Trigger: TCGTAGCTCATATGATGCCAAACAGACTCCCCCAGT...AACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAATATCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR GCA 72 bp | GCACCCACTTCTCAGACCAGCTACACAAAGCACAAATaGTCTCAAGTCCTTTGCAAACCCGTTACTTTGTTG | + |
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Preference number: 3 (lower is better) Translates to: APTSQTSYTKHK*SQVLCKPVTLL Trigger: CAACAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGTCTGAGAAGTGGGTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR GCA 72 bp | ACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTTaGAAACCCGTTACTTTGTTGTCTACATACTGCCCC | + |
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Preference number: 3 (lower is better) Translates to: TSYTKHKCSQVL*KPVTLLSTYCP Trigger: GGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CCA 72 bp | CCCATATTGTTCAACCTCACAACGGTGATATTTCTGTaGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCC | + |
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Preference number: 3 (lower is better) Translates to: PILFNLTTVIFL*FFLPCHSSVPS Trigger: GGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAATATCACCGTTGTGAGGTTGAACAATATGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR TCA 72 bp | AATTCACTGCTCCCATATTGTTCAACCTCACAACGGTaGTATTTCTGTGGTTCTTTCTTCCCTGTCATTCCA | + |
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Preference number: 3 (lower is better) Translates to: NSLLPYCSTSQR*YFCGSFFPVIP Trigger: TGGAATGACAGGGAAGAAAGAACCACAGAAATATCACCGTTGTGAGGTTGAACAATATGGGAGCAGTGAATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CCA 72 bp | CTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTaGATACACCTGGACACATTAACTATGTTTGATTTT | + |
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Preference number: 3 (lower is better) Translates to: LSSLSFQCPFPS*IHLDTLTMFDF Trigger: AAAATCAAACATAGTTAATGTGTCCAGGTGTATCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR GCA 90 bp | GTTTGGCATCATATGAGCTACGACCTTCCCTTACCAGCCCCCACCAGTCCAGCCCAGGGTGAAGTTGGCTaGTTTGGAGGGCTCCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: VWHHMSYDLPLPAPTSPAQGEVG*FGGLLG Trigger: TCCCAGGAGCCCTCCAAAGCAGCCAACTTCACCCTG...GGCTGGACTGGTGGGGGCTGGTAAGGGAAGGTCGTAGCTCATATGATGCCAAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR GCA 90 bp | GTCCTTTGCAAACCCGTTACTTTGTTGTCTACATACTGCCCCCTCCCACACACAGCAGGCCACTCTCTGTaGGCTCCCAGCTCTCCGGAT | + |
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Preference number: 4 (lower is better) Translates to: VLCKPVTLLSTYCPLPHTAGHSL*APSSPD Trigger: ATCCGGAGAGCTGGGAGCGCACAGAGAGTGGCCTGC...TGTGTGTGGGAGGGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR TCA 90 bp | TCCTTTGCAAACCCGTTACTTTGTTGTCTACATACTGCCCCCTCCCACACACACGTAGCTGGAGGATGGTaGCGTTTTGGCTGGGGCCTT | + |
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Preference number: 4 (lower is better) Translates to: SFANPLLCCLHTAPSHTHVAGGW*RFGWGL Trigger: AAGGCCCCAGCCAAAACGTCACCATCCTCCAGCTAC...GTGTGTGTGGGAGGGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR GCA 90 bp | GAGTCTGTTTGGCATCATATGAGCTACGACCTTCCCTTACCAGCCCCCACCAGTGAGATCTGGAGCATATaGAGGCTTTGGGAGCCATCG | + |
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Preference number: 4 (lower is better) Translates to: ESVWHHMSYDLPLPAPTSEIWSI*RLWEPS Trigger: CGATGGCTCCCAAAGCCTGCATATGCTCCAGATCTC...ACTGGTGGGGGCTGGTAAGGGAAGGTCGTAGCTCATATGATGCCAAACAGACTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR TCA 90 bp | TCATTCCAGTGTCCCTTCCCAAGTTGGATACACCTGGACACATTAACTATGTTTGGGCTCCTGGGAGCCTaGCACCCACACGGCAGTCTT | + |
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Preference number: 4 (lower is better) Translates to: SFQCPFPSWIHLDTLTMFGLLGA*HPHGSL Trigger: AAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCC...AAACATAGTTAATGTGTCCAGGTGTATCCAACTTGGGAAGGGACACTGGAATGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR GCA 90 bp | GTCCTTTGCAAACCCGTTACTTTGTTGTCTACATACTGCCCCCTCCCACACACAAACAGCCCATCAGGATaGCCAGGACCAGTGATGTGT | + |
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Preference number: 4 (lower is better) Translates to: VLCKPVTLLSTYCPLPHTNSPSG*PGPVMC Trigger: ACACATCACTGGTCCTGGGCATCCTGATGGGCTGTT...TGTGTGTGGGAGGGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR CCA 90 bp | GAGTCTGTTTGGCATCATATGAGCTACGACCTTCCCTTACCAGCCCCCACCAGTTTTTGCGTGGTGATGTaGTTCTCCAGGAACTCCACA | + |
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Preference number: 4 (lower is better) Translates to: ESVWHHMSYDLPLPAPTSFCVVM*FSRNST Trigger: TGTGGAGTTCCTGGAGAACCACATCACCACGCAAAA...ACTGGTGGGGGCTGGTAAGGGAAGGTCGTAGCTCATATGATGCCAAACAGACTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR TCA 90 bp | ATTTCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTGGATAGTCCACTTGTGCACATaGAGATGCCCACGGCCACAC | + |
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Preference number: 4 (lower is better) Translates to: ISVVLSSLSFQCPFPSWIVHLCT*RCPRPH Trigger: GTGTGGCCGTGGGCATCTTCATGTGCACAAGTGGAC...TATCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CAA 72 bp | CACAAATGCTCTCAAGTCCTTTGCAAACCCGTTACTTaGTTGTCTACATACTGCCCCCTCCCACACACACAC | + |
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Preference number: 4 (lower is better) Translates to: HKCSQVLCKPVT*LSTYCPLPHTH Trigger: GTGTGTGTGTGGGAGGGGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR CCA 90 bp | ACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTTGCAAACCCGTTACTTTGACATCGAAGAAGACATaGGGTTCAGAGCCCTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: TSYTKHKCSQVLCKPVTLTSKKT*GSEPSS Trigger: GGAGGAGGGCTCTGAACCCCATGTCTTCTTCGATGT...CAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR GCA 90 bp | ATTTCTGTGGTTCTTTCTTCCCTGTCATTCCAGTGTCCCTTCCCAAGTTGGATACTCCCTTTCATGTTTTaGGTGGTGATGTGGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: ISVVLSSLSFQCPFPSWILPFMF*VVMWFS Trigger: GGAGAACCACATCACCACGCAAAACATGAAAGGGAG...TATCCAACTTGGGAAGGGACACTGGAATGACAGGGAAGAAAGAACCACAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| 3UTR CAA 72 bp | GACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTaGCAAACCCGTTACTTTGTTGTCTACATACTGCCC | + |
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Preference number: 4 (lower is better) Translates to: DQLHKAQMLSSP*QTRYFVVYILP Trigger: GGGCAGTATGTAGACAACAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 90 bp | CTCTCTGTGCGCTCCCAGCTCTCCGGATCCTGCCAGGGCTGTAGCTaGAGGATGGTGACGTTTTGGCTGGGGCCTTCCAGCGTGTGTGTC | + |
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Preference number: 5 (lower is better) Translates to: LSVRSQLSGSCQGCS*RMVTFWLGPSSVCV Trigger: GACACACACGCTGGAAGGCCCCAGCCAAAACGTCACCATCCTCCAGCTACAGCCCTGGCAGGATCCGGAGAGCTGGGAGCGCACAGAGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS GCA 90 bp | CCAGGCTTTCGAACTGGGTCAGATAGATCTGCAGGCCACTCTCTGTaGGCTCCCAGCTCTCCGGATCCTGCCAGGGCTGTAGCTGGAGGA | + |
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Preference number: 5 (lower is better) Translates to: PGFRTGSDRSAGHSL*APSSPDPARAVAGG Trigger: TCCTCCAGCTACAGCCCTGGCAGGATCCGGAGAGCTGGGAGCGCACAGAGAGTGGCCTGCAGATCTATCTGACCCAGTTCGAAAGCCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS TCA 90 bp | CTGCTTCAGGGTGAAGTTGGCTGCTTTGGAGGGCTCCTGGGAGCCTaGCACCCACACGGCAGTCTTTGGCCGGAAACTTACAAAAGCGCT | + |
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Preference number: 5 (lower is better) Translates to: LLQGEVGCFGGLLGA*HPHGSLWPETYKSA Trigger: AGCGCTTTTGTAAGTTTCCGGCCAAAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCCTCCAAAGCAGCCAACTTCACCCTGAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 90 bp | AAACTTACAAAAGCGCTTCCATTCACGGCCACATCGAAGAAGACATaGGGTTCAGAGCCCTCCTCCTCCTCCTCCGGCAGCTCGCAGCCC | + |
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Preference number: 5 (lower is better) Translates to: KLTKALPFTATSKKT*GSEPSSSSSGSSQP Trigger: GGGCTGCGAGCTGCCGGAGGAGGAGGAGGAGGGCTCTGAACCCCATGTCTTCTTCGATGTGGCCGTGAATGGAAGCGCTTTTGTAAGTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 90 bp | GCATTGAGCTGCTTCAGGGTGAAGTTGGCTGCTTTGGAGGGCTCCTaGGAGCCTGACACCCACACGGCAGTCTTTGGCCGGAAACTTACA | + |
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Preference number: 5 (lower is better) Translates to: ALSCFRVKLAALEGS*EPDTHTAVFGRKLT Trigger: TGTAAGTTTCCGGCCAAAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCCTCCAAAGCAGCCAACTTCACCCTGAAGCAGCTCAATGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS GCA 90 bp | TGGGGCCTTCCAGCGTGTGTGTCAGGAGTTTTCCCAGAGAGGCGTTaGCCTGATGCCTCACATGATGGTTGTCTTGGAAATAGGAGATCT | + |
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Preference number: 5 (lower is better) Translates to: WGLPACVSGVFPERR*PDASHDGCLGNRRS Trigger: AGATCTCCTATTTCCAAGACAACCATCATGTGAGGCATCAGGGCAACGCCTCTCTGGGAAAACTCCTGACACACACGCTGGAAGGCCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS TCA 90 bp | CACACCAGCGATTATGAAACAGCCCATCAGGATGCCCAGGACCAGTaGTGTGTAAGAGCGACCTGTTTGGCTCCCTTTCATGTTTTGCGT | + |
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Preference number: 5 (lower is better) Translates to: HTSDYETAHQDAQDQ*CVRATCLAPFHVLR Trigger: ACGCAAAACATGAAAGGGAGCCAAACAGGTCGCTCTTACACATCACTGGTCCTGGGCATCCTGATGGGCTGTTTCATAATCGCTGGTGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR CAA 90 bp | ACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTTGCAAACCCGTTACTTTGGTGAAGTTGGCTGCTTaGGAGGGCTCCTGGGAGCCT | + |
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Preference number: 5 (lower is better) Translates to: TSYTKHKCSQVLCKPVTLVKLAA*EGSWEP Trigger: AGGCTCCCAGGAGCCCTCCAAAGCAGCCAACTTCAC...CAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS-3UTR CAA 90 bp | ACCAGCTACACAAAGCACAAATGCTCTCAAGTCCTTTGCAAACCCGTTACTTTGCACATGATGGTTGTCTaGGAAATAGGAGATCTGGAG | + |
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Preference number: 5 (lower is better) Translates to: TSYTKHKCSQVLCKPVTLHMMVV*EIGDLE Trigger: CTCCAGATCTCCTATTTCCAAGACAACCATCATGTG...CAAAGTAACGGGTTTGCAAAGGACTTGAGAGCATTTGTGCTTTGTGTAGCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 72 bp | CGCTCCCAGCTCTCCGGATCCTGCCAGGGCTGTAGCTaGAGGATGGTGACGTTTTGGCTGGGGCCTTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: RSQLSGSCQGCS*RMVTFWLGPSS Trigger: GCTGGAAGGCCCCAGCCAAAACGTCACCATCCTCCAGCTACAGCCCTGGCAGGATCCGGAGAGCTGGGAGCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS GCA 72 bp | AGGCCACTCTCTGTGCGCTCCCAGCTCTCCGGATCCTaGCAGGGCTGTAGCTGGAGGATGGTGACGTTTTGG | + |
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Preference number: 6 (lower is better) Translates to: RPLSVRSQLSGS*QGCSWRMVTFW Trigger: CCAAAACGTCACCATCCTCCAGCTACAGCCCTGGCAGGATCCGGAGAGCTGGGAGCGCACAGAGAGTGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS TCA 72 bp | GGTGAAGTTGGCTGCTTTGGAGGGCTCCTGGGAGCCTaGCACCCACACGGCAGTCTTTGGCCGGAAACTTAC | + |
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Preference number: 6 (lower is better) Translates to: GEVGCFGGLLGA*HPHGSLWPETY Trigger: GTAAGTTTCCGGCCAAAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCCTCCAAAGCAGCCAACTTCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 72 bp | AAAGCGCTTCCATTCACGGCCACATCGAAGAAGACATaGGGTTCAGAGCCCTCCTCCTCCTCCTCCGGCAGC | + |
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Preference number: 6 (lower is better) Translates to: KALPFTATSKKT*GSEPSSSSSGS Trigger: GCTGCCGGAGGAGGAGGAGGAGGGCTCTGAACCCCATGTCTTCTTCGATGTGGCCGTGAATGGAAGCGCTTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CAA 90 bp | CTGCTTTGGAGGGCTCCTGGGAGCCTGACACCCACACGGCAGTCTTaGGCCGGAAACTTACAAAAGCGCTTCCATTCACGGCCACATCGA | + |
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Preference number: 6 (lower is better) Translates to: LLWRAPGSLTPTRQS*AGNLQKRFHSRPHR Trigger: TCGATGTGGCCGTGAATGGAAGCGCTTTTGTAAGTTTCCGGCCAAAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCCTCCAAAGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CCA 72 bp | TCCTGCCAGGGCTGTAGCTGGAGGATGGTGACGTTTTaGCTGGGGCCTTCCAGCGTGTGTGTCAGGAGTTTT | + |
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Preference number: 6 (lower is better) Translates to: SCQGCSWRMVTF*LGPSSVCVRSF Trigger: AAAACTCCTGACACACACGCTGGAAGGCCCCAGCCAAAACGTCACCATCCTCCAGCTACAGCCCTGGCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS CAA 72 bp | AGGGCTCCTGGGAGCCTGACACCCACACGGCAGTCTTaGGCCGGAAACTTACAAAAGCGCTTCCATTCACGG | + |
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Preference number: 6 (lower is better) Translates to: RAPGSLTPTRQS*AGNLQKRFHSR Trigger: CCGTGAATGGAAGCGCTTTTGTAAGTTTCCGGCCAAAGACTGCCGTGTGGGTGTCAGGCTCCCAGGAGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CAA 72 bp | GAGCAGCTAACAGTGAGAGGAAAGAACACGTTCTCCTaGCGCTCGCGATATACCAGCTTCACCAGGCTTTCG | + |
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Preference number: 6 (lower is better) Translates to: EQLTVRGKNTFS*RSRYTSFTRLS Trigger: CGAAAGCCTGGTGAAGCTGGTATATCGCGAGCGCAAGGAGAACGTGTTCTTTCCTCTCACTGTTAGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS CAA 90 bp | TTTTCCCAGAGAGGCGTTGCCCTGATGCCTCACATGATGGTTGTCTaGGAAATAGGAGATCTGGAGCATATGCAGGCTTTGGGAGCCATC | + |
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Preference number: 6 (lower is better) Translates to: FSQRGVALMPHMMVV*EIGDLEHMQALGAI Trigger: GATGGCTCCCAAAGCCTGCATATGCTCCAGATCTCCTATTTCCAAGACAACCATCATGTGAGGCATCAGGGCAACGCCTCTCTGGGAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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| CDS TCA 72 bp | GTGATGTGGTTCTCCAGGAACTCCACACAAGTGTCCTaGAGAAATTCCTGCAGTTCATACCGAGTCCGGTTG | + |
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Preference number: 6 (lower is better) Translates to: VMWFSRNSTQVS*RNSCSSYRVRL Trigger: CAACCGGACTCGGTATGAACTGCAGGAATTTCTTCAGGACACTTGTGTGGAGTTCCTGGAGAACCACATCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS TCA 72 bp | GATTATGAAACAGCCCATCAGGATGCCCAGGACCAGTaGTGTGTAAGAGCGACCTGTTTGGCTCCCTTTCAT | + |
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Preference number: 6 (lower is better) Translates to: DYETAHQDAQDQ*CVRATCLAPFH Trigger: ATGAAAGGGAGCCAAACAGGTCGCTCTTACACATCACTGGTCCTGGGCATCCTGATGGGCTGTTTCATAATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029140.12 |
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| CDS CAA 72 bp | AGAGGCGTTGCCCTGATGCCTCACATGATGGTTGTCTaGGAAATAGGAGATCTGGAGCATATGCAGGCTTTG | + |
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Preference number: 6 (lower is better) Translates to: RGVALMPHMMVV*EIGDLEHMQAL Trigger: CAAAGCCTGCATATGCTCCAGATCTCCTATTTCCAAGACAACCATCATGTGAGGCATCAGGGCAACGCCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029140.12 ENSMUST00000132608.2 |
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