Pregenerated sensors for PROB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000073600Ensembl transcript IDs: ENSMUST00000097619.2, ENSMUST00000190196.5
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GCCAGTCCCTGTGTGGGCTCTGTTGCCTCTGCTCCTGGAGGAACATaGAGAATGGAACCAGCTAAAGGGTCAGGGACCCTTGGCCTACTC | + |
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Preference number: 1 (lower is better) Translates to: ASPCVGSVASAPGGT*RMEPAKGSGTLGLL Trigger: GAGTAGGCCAAGGGTCCCTGACCCTTTAGCTGGTTCCATTCTCCATGTTCCTCCAGGAGCAGAGGCAACAGAGCCCACACAGGGACTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR GCA 90 bp | TCACTCTGTAGGCTGGCCTTGAACTCACAGAGATCCACCTGTCGCTaGCTCCAGAGTGCTGGGATCAAAGGACTGGCCAGCTGTCACACC | + |
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Preference number: 1 (lower is better) Translates to: SLCRLALNSQRSTCR*LQSAGIKGLASCHT Trigger: GGTGTGACAGCTGGCCAGTCCTTTGATCCCAGCACTCTGGAGGCAGCGACAGGTGGATCTCTGTGAGTTCAAGGCCAGCCTACAGAGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 90 bp | CTAGTGCCTCCTGCTGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTaGCTGTCTCTACAGCAACCCTGGGCCATTTCATCCTCTTCTCTC | + |
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Preference number: 1 (lower is better) Translates to: LVPPAASLSRSCLSH*LSLQQPWAISSSSL Trigger: GAGAGAAGAGGATGAAATGGCCCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGGAGGCACTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 90 bp | AAGCCAGCTCAGCTCCTAGGGTCTACAGAAGACAGGCCTGGGGCTTaGGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: KPAQLLGSTEDRPGA*GKSWVPCCGLLVLV Trigger: GACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCCCCAGGCCTGTCTTCTGTAGACCCTAGGAGCTGAGCTGGCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 90 bp | CTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCCAGATGTaGTGGCTGTCACCTATCCCTTCCATCTCAGCAGCACCCACTGTC | + |
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Preference number: 1 (lower is better) Translates to: LGSPIGSQDKAHIQM*WLSPIPSISAAPTV Trigger: GACAGTGGGTGCTGCTGAGATGGAAGGGATAGGTGACAGCCATCACATCTGGATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR GCA 90 bp | GCTGGCCTTGAACTCACAGAGATCCACCTGTCGCTGCCTCCAGAGTaGTGGGATCAAAGGACTGGCCAGCTGTCACACCATTTTATGAAG | + |
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Preference number: 1 (lower is better) Translates to: AGLELTEIHLSLPPE*WDQRTGQLSHHFMK Trigger: CTTCATAAAATGGTGTGACAGCTGGCCAGTCCTTTGATCCCAGCACTCTGGAGGCAGCGACAGGTGGATCTCTGTGAGTTCAAGGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 90 bp | TCAACTCCAGAAATGGGCAAACAAGAGAAACACTTGCTGACCACTTaGGATTCTTTAATTCACTACTTGTCCCTAGTCACCCCTAGCCAC | + |
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Preference number: 1 (lower is better) Translates to: STPEMGKQEKHLLTT*DSLIHYLSLVTPSH Trigger: GTGGCTAGGGGTGACTAGGGACAAGTAGTGAATTAAAGAATCTCAAGTGGTCAGCAAGTGTTTCTCTTGTTTGCCCATTTCTGGAGTTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGTTGGCTGCCCCAAGCTaGCCTAGGGCCACACTGGGT | + |
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Preference number: 2 (lower is better) Translates to: SLALSLPQAQSRQSTGLGLAAPS*PRATLG Trigger: ACCCAGTGTGGCCCTAGGGCAGCTTGGGGCAGCCAA...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGCAGCCCGGGTCCTGCTaGTCCCACACCTGCTATTCT | + |
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Preference number: 2 (lower is better) Translates to: CLSVQELLVPLAVSTATLQPGSC*SHTCYS Trigger: AGAATAGCAGGTGTGGGAGCAGCAGGACCCGGGCTG...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR TCA 90 bp | TGCCCTAGGGCCACACTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCCCACTTCTGGTGTGGTaGCTGGCTGGAACTGGCCAA | + |
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Preference number: 2 (lower is better) Translates to: CPRATLGSPIGSQDKAHIPLLVW*LAGTGQ Trigger: TTGGCCAGTTCCAGCCAGTCACCACACCAGAAGTGG...GATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAGTGTGGCCCTAGGGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CAA 90 bp | CCTAGTGCCTCCTGCTGCCTCTCTGTCCAGGAGCTGCTTGTCCCATaGGCTGTCTCTACAGCAACCCTGGGCCATTTCATCCTCTTCTCT | + |
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Preference number: 2 (lower is better) Translates to: PSASCCLSVQELLVP*AVSTATLGHFILFS Trigger: AGAGAAGAGGATGAAATGGCCCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGGAGGCACTAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTCTGCCTCCAGAGTGCTaGGATCAAAGGACTGGCCAG | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCLPPEC*DQRTGQ Trigger: CTGGCCAGTCCTTTGATCCCAGCACTCTGGAGGCAG...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAAAAGAGACTGGGATCTaGAACTTCCAATGCCTTCTA | + |
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Preference number: 2 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPKETGI*NFQCLL Trigger: TAGAAGGCATTGGAAGTTCCAGATCCCAGTCTCTTT...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGGCTCCTGGAGGAACATaGAGAATGGAACCAGCTAAA | + |
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Preference number: 2 (lower is better) Translates to: SLALSLPQAQSRQSTGLGAPGGT*RMEPAK Trigger: TTTAGCTGGTTCCATTCTCCATGTTCCTCCAGGAGC...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGGTTTTTCTAGATTCTTaGTCTCCCTGCCCTCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SLALSLPQAQSRQSTGLGVFLDS*SPCPLN Trigger: GTTGAGAGGGCAGGGAGAGCAAGAATCTAGAAAAAC...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTCTGGGATCAAAGGACTaGCCAGCTGTCACACCATTT | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCLGSKD*PAVTPF Trigger: AAATGGTGTGACAGCTGGCCAGTCCTTTGATCCCAG...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCCTGGGTTCCCTGCTGTaGGCTGTTAGTTTTAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: HLLSNTPPARLQMTEITSLGSLL*AVSFSQ Trigger: CTGACTAAAACTAACAGCCCACAGCAGGGAACCCAG...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCTGTTGCCTCTGCTCCTaGAGGAACATGGAGAATGGA | + |
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Preference number: 2 (lower is better) Translates to: HLLSNTPPARLQMTEITSCCLCS*RNMENG Trigger: TCCATTCTCCATGTTCCTCCAGGAGCAGAGGCAACA...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTACTGGCTTCTCACTTTaGCAGACTTGCTTGCCTACA | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCTGFSL*QTCLPT Trigger: TGTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGT...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTCAACACCTCCTAGACTaGCTTCTCACTTTGACAGAC | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCQHLLD*LLTLTD Trigger: GTCTGTCAAAGTGAGAAGCCAGTCTAGGAGGTGTTG...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTGAGACAGGATTTCTCTaGGTAGTCCTGGAACTCACT | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCETGFL*VVLELT Trigger: AGTGAGTTCCAGGACTACCCAGAGAAATCCTGTCTC...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTCCTAGTGCCTCCTGCTaGCTCTCTGTCCAGGAGCTG | + |
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Preference number: 2 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAPSASC*LSVQEL Trigger: CAGCTCCTGGACAGAGAGGCAGCAGGAGGCACTAGG...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGTTTGACAGACTTGCTTaGCTACATAAACAAATACAC | + |
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Preference number: 2 (lower is better) Translates to: SLALSLPQAQSRQSTGLGFDRLA*LHKQIH Trigger: GTGTATTTGTTTATGTAGGCAAGCAAGTCTGTCAAA...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR GCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTAGATCCACCTGTCGCTaGCTCCAGAGTGCTGGGATC | + |
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Preference number: 2 (lower is better) Translates to: LPLYCLPVDLTYLGSMKARSTCR*LQSAGI Trigger: GATCCCAGCACTCTGGAGGCAGCGACAGGTGGATCT...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGCACCCTGGGAAGGTCTaGGAAAAGGATACATATTTT | + |
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Preference number: 2 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLHPGKV*EKDTYF Trigger: AAAATATGTATCCTTTTCCCAGACCTTCCCAGGGTG...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR TCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTCACTTGCTGACCACTTaGGATTCTTTAATTCACTAC | + |
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Preference number: 2 (lower is better) Translates to: GLRKELGSLLWAVSFSQCHLLTT*DSLIHY Trigger: GTAGTGAATTAAAGAATCTCAAGTGGTCAGCAAGTG...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR TCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCCTATTGTCTTCCTGTTaGTTTAACTTACTTGGGGTC | + |
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Preference number: 2 (lower is better) Translates to: HLLSNTPPARLQMTEITSLLSSC*FNLLGV Trigger: GACCCCAAGTAAGTTAAATCAACAGGAAGACAATAG...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGTCTCAACTCCAGAAATaGGCAAACAAGAGAAACACT | + |
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Preference number: 2 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLSQLQK*ANKRNT Trigger: AGTGTTTCTCTTGTTTGCCCATTTCTGGAGTTGAGA...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGGAAGCTCCTCCATTTTaGTTAAACAACAATTCCCAA | + |
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Preference number: 2 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLEAPPF*LNNNSQ Trigger: TTGGGAATTGTTGTTTAACCAAAATGGAGGAGCTTC...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CAA 90 bp | TGCTATTCTGGGAAACCCCAACACCTCCTAGACTGGCTTCTCACTTaGACAGACTTGCTTGCCTACATAAACAAATACACAAATACACCA | + |
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Preference number: 2 (lower is better) Translates to: CYSGKPQHLLDWLLT*TDLLAYINKYTNTP Trigger: TGGTGTATTTGTGTATTTGTTTATGTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGTCTAGGAGGTGTTGGGGTTTCCCAGAATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 72 bp | CAGACAGAGCACAGGTTTAGGGTCTTTCCTGTGCTGTaGGCAGCCGGGAGGGCCAGTCCCTGTGTGGGCTCT | + |
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Preference number: 3 (lower is better) Translates to: QTEHRFRVFPVL*AAGRASPCVGS Trigger: AGAGCCCACACAGGGACTGGCCCTCCCGGCTGCTCACAGCACAGGAAAGACCCTAAACCTGTGCTCTGTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR GCA 72 bp | CAGAGCAGACAGAGCACAGGTTTAGGGTCTTTCCTGTaGTGTGAGCAGCCGGGAGGGCCAGTCCCTGTGTGG | + |
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Preference number: 3 (lower is better) Translates to: QSRQSTGLGSFL*CEQPGGPVPVW Trigger: CCACACAGGGACTGGCCCTCCCGGCTGCTCACAGCACAGGAAAGACCCTAAACCTGTGCTCTGTCTGCTCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | GCAGCCCGGGTCCTGCTGCTCCCACACCTGCTATTCTaGGAAACCCCAACACCTCCTAGACTGGCTTCTCAC | + |
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Preference number: 3 (lower is better) Translates to: AARVLLLPHLLF*ETPTPPRLASH Trigger: GTGAGAAGCCAGTCTAGGAGGTGTTGGGGTTTCCCAGAATAGCAGGTGTGGGAGCAGCAGGACCCGGGCTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CAA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGGGGAGATACAAACAGTaGACCCAGGCAGCCCGGGTC | + |
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Preference number: 3 (lower is better) Translates to: SLALSLPQAQSRQSTGLGGRYKQ*TQAARV Trigger: GACCCGGGCTGCCTGGGTCAACTGTTTGTATCTCCC...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 59% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR GCA 72 bp | TTCCTAGTGCCTCCTGCTGCCTCTCTGTCCAGGAGCTaGTTGTCCCATTGGCTGTCTCTACAGCAACCCTGG | + |
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Preference number: 3 (lower is better) Translates to: FLVPPAASLSRS*LSHWLSLQQPW Trigger: CCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGGAGGCACTAGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | CCTGCTGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTaGCTGTCTCTACAGCAACCCTGGGCCATTTCATCC | + |
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Preference number: 3 (lower is better) Translates to: PAASLSRSCLSH*LSLQQPWAISS Trigger: GGATGAAATGGCCCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CAA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGACTGGCTTCTCACTTaGACAGACTTGCTTGCCTAC | + |
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Preference number: 3 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPDWLLT*TDLLAY Trigger: GTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGTC...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR GCA 72 bp | GAACTCACAGAGATCCACCTGTCGCTGCCTCCAGAGTaGTGGGATCAAAGGACTGGCCAGCTGTCACACCAT | + |
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Preference number: 3 (lower is better) Translates to: ELTEIHLSLPPE*WDQRTGQLSHH Trigger: ATGGTGTGACAGCTGGCCAGTCCTTTGATCCCAGCACTCTGGAGGCAGCGACAGGTGGATCTCTGTGAGTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | TACCACAACTCCAGCTACTATCCTCGTAGCTCTCATTaGCTGCCCCAAGCTGCCCTAGGGCCACACTGGGTT | + |
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Preference number: 3 (lower is better) Translates to: YHNSSYYPRSSH*LPQAALGPHWV Trigger: AACCCAGTGTGGCCCTAGGGCAGCTTGGGGCAGCCAATGAGAGCTACGAGGATAGTAGCTGGAGTTGTGGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | TGTGTGGGCTCTGTTGCCTCTGCTCCTGGAGGAACATaGAGAATGGAACCAGCTAAAGGGTCAGGGACCCTT | + |
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Preference number: 3 (lower is better) Translates to: CVGSVASAPGGT*RMEPAKGSGTL Trigger: AAGGGTCCCTGACCCTTTAGCTGGTTCCATTCTCCATGTTCCTCCAGGAGCAGAGGCAACAGAGCCCACACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR-3UTR CAA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGCTCTGTAGGCTGGCCTaGAACTCACAGAGATCCACC | + |
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Preference number: 3 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLLCRLA*NSQRST Trigger: GGTGGATCTCTGTGAGTTCAAGGCCAGCCTACAGAG...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 72 bp | CCCATAGGCTCCCAGGATAAAGCACACATCCAGATGTaGTGGCTGTCACCTATCCCTTCCATCTCAGCAGCA | + |
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Preference number: 3 (lower is better) Translates to: PIGSQDKAHIQM*WLSPIPSISAA Trigger: TGCTGCTGAGATGGAAGGGATAGGTGACAGCCATCACATCTGGATGTGTGCTTTATCCTGGGAGCCTATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 72 bp | TCCATGGTCAGCCATTTATTGCACACGAAGGTGAGATaGTACACTCTAGGGGTGGGCCTGGTCTCTCCATGT | + |
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Preference number: 3 (lower is better) Translates to: SMVSHLLHTKVR*YTLGVGLVSPC Trigger: ACATGGAGAGACCAGGCCCACCCCTAGAGTGTATCATCTCACCTTCGTGTGCAATAAATGGCTGACCATGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 72 bp | AGCAGATACACTCTCTTAAGGCCACTTCTGGTGTGGTaGCTGGCTGGAACTGGCCAAAGAATTGATGGGAGA | + |
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Preference number: 3 (lower is better) Translates to: SRYTLLRPLLVW*LAGTGQRIDGR Trigger: TCTCCCATCAATTCTTTGGCCAGTTCCAGCCAGTCACCACACCAGAAGTGGCCTTAAGAGAGTGTATCTGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR TCA 72 bp | GGACCAGTGTCTCTGGTAGAGATGTTGAGGTTATTTTaGCGGTGCACTTTAGCCGATTTCCAGTCTAGGGCA | + |
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Preference number: 3 (lower is better) Translates to: GPVSLVEMLRLF*RCTLADFQSRA Trigger: TGCCCTAGACTGGAAATCGGCTAAAGTGCACCGTCAAAATAACCTCAACATCTCTACCAGAGACACTGGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | ACCTGCTATTCTGGGAAACCCCAACACCTCCTAGACTaGCTTCTCACTTTGACAGACTTGCTTGCCTACATA | + |
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Preference number: 3 (lower is better) Translates to: TCYSGKPQHLLD*LLTLTDLLAYI Trigger: TATGTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGTCTAGGAGGTGTTGGGGTTTCCCAGAATAGCAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | GCCTGGGGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTaGGCTGTTAGTTTTAGTCAGTGTCTTTGTTTATTT | + |
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Preference number: 3 (lower is better) Translates to: AWGLRKELGSLL*AVSFSQCLCLF Trigger: AAATAAACAAAGACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCCCCAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CCA 72 bp | TGCCTACATAAACAAATACACAAATACACCACACCCTaGGAAGGTCTGGGAAAAGGATACATATTTTTGTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLHKQIHKYTTP*EGLGKGYIFLL Trigger: CAACAAAAATATGTATCCTTTTCCCAGACCTTCCCAGGGTGTGGTGTATTTGTGTATTTGTTTATGTAGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TTAGGGTCTTTCCTGTGCTGTGAGCAGCCGGGAGGGCCAGTCCCTGTGTGGGCTGCGCCGTCTGCACGATaGCCGCGGCGGCCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFLCCEQPGGPVPVWAAPSAR*PRRPAS Trigger: GCTTGCAGGCCGCCGCGGGCATCGTGCAGACGGCGC...AGCCCACACAGGGACTGGCCCTCCCGGCTGCTCACAGCACAGGAAAGACCCTAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGTGTTAGGGAGATACTAGCCAGCGCCGTCTaGACGATGCCCGCGGCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SAAPTVGLHSTGPSVREILASAV*TMPAAA Trigger: GGCCGCCGCGGGCATCGTGCAGACGGCGCTGGCTAG...TATCTCCCTAACACTGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGGCGCGCGACTGTCCTaGGAGGGACTCCGAGGCCGC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLGARLS*EGLRGR Trigger: GCGGCCTCGGAGTCCCTCGCAGGACAGTCGCGCGCC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAAGGGTGCAGCGGCCCTaGCTGCCGTCGCCGGATGAT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPRVQRP*LPSPDD Trigger: ATCATCCGGCGACGGCAGCCAGGGCCGCTGCACCCT...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGTGTTAGGGAGATAAGAGGCAGGAGACGCTaGCCCGGGCAGCTGGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: SAAPTVGLHSTGPSVREIRGRRR*PGQLGT Trigger: AGTCCCCAGCTGCCCGGGCCAGCGTCTCCTGCCTCT...TATCTCCCTAACACTGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGAGCCGGAGCCGTGCTaGTGGCGGCTATTCTGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLEPEPC*WRLFWA Trigger: CGCCCAGAATAGCCGCCAGCAGCACGGCTCCGGCTC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGATGCCCGCGGCGGCCTaGAAGCGGCTCAGAGACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SLALSLPQAQSRQSTGLGMPAAA*KRLRDS Trigger: CGAGTCTCTGAGCCGCTTGCAGGCCGCCGCGGGCAT...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGTGTTAGGGAGATAAGTCGCAGCCTCGGCTaGCTCGGCGCCTCCACAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SAAPTVGLHSTGPSVREISRSLG*LGASTK Trigger: CTTTGTGGAGGCGCCGAGGCAGCCGAGGCTGCGACT...TATCTCCCTAACACTGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TGCCCTAGGGCCACACTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCCCGGAGCCGTGCTGCTaGCGGCTATTCTGGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: CPRATLGSPIGSQDKAHIPEPCC*RLFWAL Trigger: CAGCGCCCAGAATAGCCGCCAGCAGCACGGCTCCGG...GATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAGTGTGGCCCTAGGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGGGAAGCCCGGAGCCTaGGGTCCCTGCAGGGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLGKPGA*GPCREA Trigger: AGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGTGTTAGGGAGATAGACACAGAGCCTCTGTaGGCTCTGGAGTCGCGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SAAPTVGLHSTGPSVREIDTEPL*ALESRV Trigger: CACCCGCGACTCCAGAGCTCACAGAGGCTCTGTGTC...TATCTCCCTAACACTGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGCCGTTTGGAGCCTGCTaGGGAGGAGAGGGGCTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SLALSLPQAQSRQSTGLGPFGAC*GGEGLL Trigger: CAGGAGCCCCTCTCCTCCGCAGCAGGCTCCAAACGG...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGCGCGGTGCTGTTCTCTaGCCGCCGCCTCGGGACCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLRGAVL*PPPRDP Trigger: GGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCG...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGCGAAAGGCTTCGCGGTaGTGTTCTCTGCCCGCCGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLRKASR*CSLPAA Trigger: GGCGGCGGGCAGAGAACAGCACCGCGAAGCCTTTCG...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCATGCTGGCGGCTATTCTaGGCGCTGACGGACAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPCWRLF*ALTDRT Trigger: TGTCCTGTCCGTCAGCGCCCAGAATAGCCGCCAGCA...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TGCCCTAGGGCCACACTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCGCAGCTCCAGGTAGGTaGCCCAGCGAGAGCCTCCGT | + |
|
Preference number: 4 (lower is better) Translates to: CPRATLGSPIGSQDKAHIAAPGR*PSESLR Trigger: ACGGAGGCTCTCGCTGGGCCACCTACCTGGAGCTGC...GATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAGTGTGGCCCTAGGGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TTAGGGTCTTTCCTGTGCTGTGAGCAGCCGGGAGGGCCAGTCCCTGTGTGGGCTCCAGGACCGCGTCTTTaGACACTCGGGGTTTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGSFLCCEQPGGPVPVWAPGPRL*TLGVFS Trigger: GGAGAAAACCCCGAGTGTCCAAAGACGCGGTCCTGG...AGCCCACACAGGGACTGGCCCTCCCGGCTGCTCACAGCACAGGAAAGACCCTAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| 3UTR CAA 72 bp | CTAGTGCCTCCTGCTGCCTCTCTGTCCAGGAGCTGCTaGTCCCATTGGCTGTCTCTACAGCAACCCTGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVPPAASLSRSC*SHWLSLQQPWA Trigger: GGCCCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGGAGGCACTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGCTCGCGGCCGCGGAATaGTCACGCGCGGGCGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLLAAAE*SRAGVQ Trigger: CTGAACGCCCGCGCGTGACCATTCCGCGGCCGCGAG...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGGGACCCCGCTGGACTaGGAGGCATCCTTAGGGGTT | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLGTPLD*EASLGV Trigger: AACCCCTAAGGATGCCTCCCAGTCCAGCGGGGTCCC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAACAGAAGAGCATTGGTaGTGCGGGACTAGGGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPTEEHW*CGTRGP Trigger: GGGACCCCTAGTCCCGCACCACCAATGCTCTTCTGT...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGGCACAGAAGAGCATTaGTGGTGCGGGACTAGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPGTEEH*WCGTRG Trigger: ACCCCTAGTCCCGCACCACCAATGCTCTTCTGTGCC...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAACTCTAGCGACACCCTaGGTCCATTGGGGAAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPTLATP*VHWGSG Trigger: ACCACTTCCCCAATGGACTCAGGGTGTCGCTAGAGT...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAACCCGCATTTTCCAGTaGGAGCAGACACAGAGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPTRIFQ*EQTQSL Trigger: GAGGCTCTGTGTCTGCTCTCACTGGAAAATGCGGGT...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGGAGCCTGGGGTCCCTaGAGGGAAGCTTGGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLGAWGP*REAWCI Trigger: TATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGGAGCCCAAGGTAGCTaGAGACTACCAAGGGCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: CLSVQELLVPLAVSTATLGAQGS*RLPRAD Trigger: GTCGGCCCTTGGTAGTCTCCAGCTACCTTGGGCTCC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCCTAGGGCCACACTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCATGCAGTGCCGTCGATaGACCCTGCACAACAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: CPRATLGSPIGSQDKAHIMQCRR*TLHNRT Trigger: AGTCCTGTTGTGCAGGGTGCATCGACGGCACTGCAT...GATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAGTGTGGCCCTAGGGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCGAGGAGAGGGGCTCCTaGGCCTCACAACCCTACTGG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSNTPPARLQMTEITSEERGS*ASQPYW Trigger: CCAGTAGGGTTGTGAGGCCCAGGAGCCCCTCTCCTC...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| 3UTR CAA 72 bp | TCCTGCTGCCTCTCTGTCCAGGAGCTGCTTGTCCCATaGGCTGTCTCTACAGCAACCCTGGGCCATTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SCCLSVQELLVP*AVSTATLGHFI Trigger: GATGAAATGGCCCAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCAGCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCGAAGAGCATTGGTGGTaGGGGACTAGGGGTCCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLSNTPPARLQMTEITSEEHWW*GTRGPA Trigger: AGCGGGACCCCTAGTCCCGCACCACCAATGCTCTTC...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCAGGGGAAACTGGGTCTTaGATTCCTGTTTGTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPGETGS*IPVCKP Trigger: AGGCTTACAAACAGGAATCCAAGACCCAGTTTCCCC...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGAGGAGCTTCAGGACATaGGTTCCCAACTCTAGCGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLALSLPQAQSRQSTGLGRSFRT*VPNSSD Trigger: GTCGCTAGAGTTGGGAACCCATGTCCTGAAGCTCCT...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTTCCACACACTCGTACTaGCCTGAGACGGCAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRKELGSLLWAVSFSQCSTHSY*PETAGL Trigger: GAGTCCTGCCGTCTCAGGCCAGTACGAGTGTGTGGA...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGGATGCTGGAACTAACTaGACCCAGAGGCTCGGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLDAGTN*TQRLGP Trigger: GGGACCGAGCCTCTGGGTCCAGTTAGTTCCAGCATC...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCTTGGGGAAGTGGTGGTaGGGAAGGGGTCCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: HLLSNTPPARLQMTEITSLGKWW*GRGPSA Trigger: AGCAGAAGGACCCCTTCCCCACCACCACTTCCCCAA...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAGGCTCCAAATGACAGAGATCACCTCCCACCTCACAGAGATTGGTCTCTGCCTTGCTGGACTGGATaGGACCAGAACTGGAGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: SKAPNDRDHLPPHRDWSLPCWTG*DQNWRV Trigger: CACCCTCCAGTTCTGGTCCCATCCAGTCCAGCAAGG...CAGAGACCAATCTCTGTGAGGTGGGAGGTGATCTCTGTCATTTGGAGCCTTGCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGATGAGGTTTCTCCTCTaGCTGCAGAAAGATGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SLALSLPQAQSRQSTGLGMRFLL*LQKDAG Trigger: TCCAGCATCTTTCTGCAGTCAGAGGAGAAACCTCAT...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTGCCCCGCGCCGAAGATaGCTTCCATCTCCCCCGACG | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAAPRRR*LPSPPT Trigger: CGTCGGGGGAGATGGAAGTCATCTTCGGCGCGGGGC...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTCCCGAGCCGGAGCCGTaGTGCTGGCGGCTATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAPEPEP*CWRLFW Trigger: CCAGAATAGCCGCCAGCAGCACGGCTCCGGCTCGGG...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | CACCTCCTATCAAACACTCCTCCAGCAAGGCTCCAAATGACAGAGATCACCTCCGAAACACAGAACCCTTaGTGGACTGGATGGGACCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLLSNTPPARLQMTEITSETQNP*WTGWDQ Trigger: CTGGTCCCATCCAGTCCAGCAAGGGTTCTGTGTTTC...GGAGGTGATCTCTGTCATTTGGAGCCTTGCTGGAGGAGTGTTTGATAGGAGGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTGGCTATTCTGGGCGCTaGCGGACAGGACAGGCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAGYSGR*RTGQAA Trigger: CGCAGCCTGTCCTGTCCGTCAGCGCCCAGAATAGCC...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTGACCTGCGGCTGCGATaGGACAGAGGCAGGAGACGC | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKADLRLR*DRGRRR Trigger: GCGTCTCCTGCCTCTGTCTCATCGCAGCCGCAGGTC...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR TCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTTGGAGTCGCGGGTGCTaGTGGTGTAGGCGGCTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAWSRGC*WCRRLQ Trigger: CTGGAGCCGCCTACACCATCAGCACCCGCGACTCCA...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR GCA 90 bp | TGCCCTAGGGCCACACTGGGTTCTCCCATAGGCTCCCAGGATAAAGCACACATCTGCAGGGAAGCTTGGTaGATAAGTAGTCTTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: CPRATLGSPIGSQDKAHICREAW*ISSLNH Trigger: ATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCA...GATGTGTGCTTTATCCTGGGAGCCTATGGGAGAACCCAGTGTGGCCCTAGGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | GGCTTGAGGAAAGAGCTGGGTTCCCTGCTGTGGGCTGTTAGTTTTAGTCAGTGTGTCTCACGGGGAAACTaGGTCTTGGATTCCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: GLRKELGSLLWAVSFSQCVSRGN*VLDSCL Trigger: CAAACAGGAATCCAAGACCCAGTTTCCCCGTGAGAC...ACACTGACTAAAACTAACAGCCCACAGCAGGGAACCCAGCTCTTTCCTCAAGCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTAATCTTAGAAGGTTGTaGGGGGTTGTGGGGAGACCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKANLRRL*GVVGRP Trigger: GGGTCTCCCCACAACCCCCCACAACCTTCTAAGATT...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS-3UTR CCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTGGAGCTTGTGAGTTTTaGATGCATCACCGTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAGACEF*MHHRPP Trigger: GGGAGGACGGTGATGCATCCAAAACTCACAAGCTCC...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CAA 72 bp | GGGAAACCCCAACACCTCCTAGACTGGCTTCTCACTTaGACAGACTTGCTTGCCTACATAAACAAATACACA | + |
|
Preference number: 4 (lower is better) Translates to: GKPQHLLDWLLT*TDLLAYINKYT Trigger: TGTGTATTTGTTTATGTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGTCTAGGAGGTGTTGGGGTTTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS-3UTR GCA 90 bp | CTTCCTCTCTATTGTCTTCCTGTTGATTTAACTTACTTGGGGTCAATGAAGGCTGGTTTCTCCTCTGACTaGAGAAAGATGCTGGAACTA | + |
|
Preference number: 4 (lower is better) Translates to: LPLYCLPVDLTYLGSMKAGFSSD*RKMLEL Trigger: TAGTTCCAGCATCTTTCTGCAGTCAGAGGAGAAACC...AGCCTTCATTGACCCCAAGTAAGTTAAATCAACAGGAAGACAATAGAGAGGAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CAA 72 bp | CAACACCTCCTAGACTGGCTTCTCACTTTGACAGACTaGCTTGCCTACATAAACAAATACACAAATACACCA | + |
|
Preference number: 4 (lower is better) Translates to: QHLLDWLLTLTD*LAYINKYTNTP Trigger: TGGTGTATTTGTGTATTTGTTTATGTAGGCAAGCAAGTCTGTCAAAGTGAGAAGCCAGTCTAGGAGGTGTTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| 3UTR CAA 72 bp | AGAAATGGGCAAACAAGAGAAACACTTGCTGACCACTaGAGATTCTTTAATTCACTACTTGTCCCTAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RNGQTRETLADH*RFFNSLLVPSH Trigger: GTGACTAGGGACAAGTAGTGAATTAAAGAATCTCAAGTGGTCAGCAAGTGTTTCTCTTGTTTGCCCATTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS GCA 90 bp | CCGCGGCGGCCTGCAAGCGGCTCAGAGACTCGTCCAGGGAGCCCGTaGGCAGGAGCAGTCGGGGACGCGGCGCGCGACTGTCCTGCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRRPASGSETRPGSP*AGAVGDAARDCPAR Trigger: CCTCGCAGGACAGTCGCGCGCCGCGTCCCCGACTGCTCCTGCGCACGGGCTCCCTGGACGAGTCTCTGAGCCGCTTGCAGGCCGCCGCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | CCGGAGCCCGGGCCTCGCGGGAAACCCGAGCCGGAGCCGTGCTGCTaGCGGCTATTCTGGGCGCTGACGGACAGGACAGGCTGCGCGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PEPGPRGKPEPEPCC*RLFWALTDRTGCAP Trigger: GGGCGCGCAGCCTGTCCTGTCCGTCAGCGCCCAGAATAGCCGCCAGCAGCACGGCTCCGGCTCGGGTTTCCCGCGAGGCCCGGGCTCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | ACGGGCGCGCTGCGCTCCTCCAGGGCCACCTCCACACACTCGTACTaGCCTGAGACGGCAGGACTCGGCTCGCGGGGCGGCAGCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: TGALRSSRATSTHSY*PETAGLGSRGGSSR Trigger: CCTGGAGCTGCCGCCCCGCGAGCCGAGTCCTGCCGTCTCAGGCCAGTACGAGTGTGTGGAGGTGGCCCTGGAGGAGCGCAGCGCGCCCGT 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 90 bp | CGCGCTGCGCTCCTCCAGGGCCACCTCCACACACTCGTACTGGCCTaGGACGGCAGGACTCGGCTCGCGGGGCGGCAGCTCCAGGTAGGT | + |
|
Preference number: 5 (lower is better) Translates to: RAALLQGHLHTLVLA*DGRTRLAGRQLQVG Trigger: ACCTACCTGGAGCTGCCGCCCCGCGAGCCGAGTCCTGCCGTCTCAGGCCAGTACGAGTGTGTGGAGGTGGCCCTGGAGGAGCGCAGCGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 90 bp | CGACTGTCCTGCGAGGGACTCCGAGGCCGCGGACGCAGCTCGATCTaGCGTTTCGGCACAGTGCGGGGTCTAACGGGCGCGCTGCGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RLSCEGLRGRGRSSI*RFGTVRGLTGALRS Trigger: GGAGCGCAGCGCGCCCGTTAGACCCCGCACTGTGCCGAAACGTCAGATCGAGCTGCGTCCGCGGCCTCGGAGTCCCTCGCAGGACAGTCG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | CCTAGTTTTCTAGCCAGCGCCGTCTGCACGATGCCCGCGGCGGCCTaGAAGCGGCTCAGAGACTCGTCCAGGGAGCCCGTGCGCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: PSFLASAVCTMPAAA*KRLRDSSREPVRRS Trigger: GCTCCTGCGCACGGGCTCCCTGGACGAGTCTCTGAGCCGCTTGCAGGCCGCCGCGGGCATCGTGCAGACGGCGCTGGCTAGAAAACTAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | CTGGGGGCTGGGACCGCAGAGCCTAGTTTTCTAGCCAGCGCCGTCTaGACGATGCCCGCGGCGGCCTGCAAGCGGCTCAGAGACTCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGAGTAEPSFLASAV*TMPAAACKRLRDSS Trigger: GGACGAGTCTCTGAGCCGCTTGCAGGCCGCCGCGGGCATCGTGCAGACGGCGCTGGCTAGAAAACTAGGCTCTGCGGTCCCAGCCCCCAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | GAGCGCCAGGCAAGCGGATCTCACTTCGAGCGAAAGGCTTCGCGGTaGTGTTCTCTGCCCGCCGCCTCGGGACCCCGCTGGACTGGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: ERQASGSHFERKASR*CSLPAASGPRWTGR Trigger: CCTCCCAGTCCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCGAAGCCTTTCGCTCGAAGTGAGATCCGCTTGCCTGGCGCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 90 bp | CTGGAGACTACCAAGGGCCGACAGGTTGGGGGACAGCGGCGACAGTaGTGGACCAGAGATAGGCCCATAGGCGGGCGGGTAGAGGCCGGG | + |
|
Preference number: 5 (lower is better) Translates to: LETTKGRQVGGQRRQ*WTRDRPIGGRVEAG Trigger: CCCGGCCTCTACCCGCCCGCCTATGGGCCTATCTCTGGTCCATCACTGTCGCCGCTGTCCCCCAACCTGTCGGCCCTTGGTAGTCTCCAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | AGGCGCGGGAAGCCCGGAGCCTGGGGTCCCTGCAGGGAAGCTTGGTaGATAAGTAGTCTTAACCATCTTGCGCACGTCTCGCGGCCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RRGKPGAWGPCREAW*ISSLNHLAHVSRPR Trigger: CCGCGGCCGCGAGACGTGCGCAAGATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCCGCGCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | CAAGCGGATCTCACTTCGAGCGAAAGGCTTCGCGGTGCTGTTCTCTaGCCGCCGCCTCGGGACCCCGCTGGACTGGGAGGCATCCTTAGG | + |
|
Preference number: 5 (lower is better) Translates to: QADLTSSERLRGAVL*PPPRDPAGLGGILR Trigger: CCTAAGGATGCCTCCCAGTCCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCGAAGCCTTTCGCTCGAAGTGAGATCCGCTTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | TTCGCGGTGCTGTTCTCTGCCCGCCGCCTCGGGACCCCGCTGGACTaGGAGGCATCCTTAGGGGTTGCATGGAGTGAAGGCTCTGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FAVLFSARRLGTPLD*EASLGVAWSEGSGD Trigger: GTCACCAGAGCCTTCACTCCATGCAACCCCTAAGGATGCCTCCCAGTCCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGTCCCGGGCGCCGGCTaGTCCCGCCGAATCGCTCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSVQELLVPLAVSTATLVPGAG*SRRIAR Trigger: GCGAGCGATTCGGCGGGACAAGCCGGCGCCCGGGAC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TTAGGGTCTTTCCTGTGCTGTGAGCAGCCGGGAGGGCCAGTCCCTGTGTGGGCTGCGCCTGGACCGCAGTaGCAGGAGCCACAAGCGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LGSFLCCEQPGGPVPVWAAPGPQ*QEPQAV Trigger: CACCGCTTGTGGCTCCTGCAACTGCGGTCCAGGCGC...AGCCCACACAGGGACTGGCCCTCCCGGCTGCTCACAGCACAGGAAAGACCCTAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS CCA 90 bp | AGGAGGCGCGGGAAGCCCGGAGCCTGGGGTCCCTGCAGGGAAGCTTaGTGCATAAGTAGTCTTAACCATCTTGCGCACGTCTCGCGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: RRRGKPGAWGPCREA*CISSLNHLAHVSRP Trigger: CGGCCGCGAGACGTGCGCAAGATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCCGCGCCTCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | CTAAAGGGGAACATTGGGTTGAGGTGCGAGCGCCTCCTAAAGGGCTaGTCCGACCCTCAGGGTCCCGGACCAGGCGCTGGGCCTCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: LKGNIGLRCERLLKG*SDPQGPGPGAGPQH Trigger: ATGCTGAGGCCCAGCGCCTGGTCCGGGACCCTGAGGGTCGGACCAGCCCTTTAGGAGGCGCTCGCACCTCAACCCAATGTTCCCCTTTAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | CCGGGGCGAGGTGGTCGCGTCCCTGTCGACTCTAAAGGGGAACATTaGGTTGAGGTGCGAGCGCCTCCTAAAGGGCTGGTCCGACCCTCA | + |
|
Preference number: 5 (lower is better) Translates to: PGRGGRVPVDSKGEH*VEVRAPPKGLVRPS Trigger: TGAGGGTCGGACCAGCCCTTTAGGAGGCGCTCGCACCTCAACCCAATGTTCCCCTTTAGAGTCGACAGGGACGCGACCACCTCGCCCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 90 bp | GCAGGTGTCCGCAGGAGGCGCGGGAAGCCCGGAGCCTGGGGTCCCTaGAGGGAAGCTTGGTGCATAAGTAGTCTTAACCATCTTGCGCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGVRRRRGKPGAWGP*REAWCISSLNHLAH Trigger: GTGCGCAAGATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCCGCGCCTCCTGCGGACACCTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | AGGCCGCGGGACTCTGGCAGAGGAGGAATTATCGTGCGCGCGGGGTaGCCGAGACTTAGCCTCTTCCAGGAGCACACGAGTGCTGTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RPRDSGRGGIIVRAG*PRLSLFQEHTSAVC Trigger: ACAGACAGCACTCGTGTGCTCCTGGAAGAGGCTAAGTCTCGGCCACCCCGCGCGCACGATAATTCCTCCTCTGCCAGAGTCCCGCGGCCT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | CTATCCCTTCCATCTCAGCAGCACCCACTGTCGGGCTCCACTCAACTGGGCCCATGTGGGGAGACCCGTTaGGAGCCTGCTGCGGAGGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSLPSQQHPLSGSTQLGPCGETR*EPAAEE Trigger: CTCCTCCGCAGCAGGCTCCAAACGGGTCTCCCCACA...TGGGCCCAGTTGAGTGGAGCCCGACAGTGGGTGCTGCTGAGATGGAAGGGATAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGCCAAGGGCCGACAGGTaGGGGGACAGCGGCGACAGT | + |
|
Preference number: 5 (lower is better) Translates to: SLALSLPQAQSRQSTGLGPRADR*GDSGDS Trigger: ACTGTCGCCGCTGTCCCCCAACCTGTCGGCCCTTGG...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS TCA 90 bp | TGGAGACCGTTGACCGCCTCTGACGGCGATACCCGCATTTTCCAGTaGGAGCAGACACAGAGCCTCTGTGAGCTCTGGAGTCGCGGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: WRPLTASDGDTRIFQ*EQTQSLCELWSRGC Trigger: GCACCCGCGACTCCAGAGCTCACAGAGGCTCTGTGTCTGCTCTCACTGGAAAATGCGGGTATCGCCGTCAGAGGCGGTCAACGGTCTCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | AGGGAAGGCCGGGCTGCTCCGTCTCCAAACAATCTTAGAAGGTTGTaGGGGGTTGTGGGGAGACCCGTTTGGAGCCTGCTGCGGAGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: REGRAAPSPNNLRRL*GVVGRPVWSLLRRR Trigger: TCTCCTCCGCAGCAGGCTCCAAACGGGTCTCCCCACAACCCCCCACAACCTTCTAAGATTGTTTGGAGACGGAGCAGCCCGGCCTTCCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | AAACACAGAACCCTTGCTGGACTGGATGGGACCAGAACTGGAGGGTaGGGCACAGAAGAGCATTGGTGGTGCGGGACTAGGGGTCCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KHRTLAGLDGTRTGG*GTEEHWWCGTRGPA Trigger: AGCGGGACCCCTAGTCCCGCACCACCAATGCTCTTCTGTGCCCCACCCTCCAGTTCTGGTCCCATCCAGTCCAGCAAGGGTTCTGTGTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 90 bp | GGTGTAGGCGGCTCCAGCTCCTGGGTTAGACCGTTCATAGCTTCCTaGTGCAGTGCCGTCGATGCACCCTGCACAACAGGACTCCAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GVGGSSSWVRPFIAS*CSAVDAPCTTGLQV Trigger: GACTTGGAGTCCTGTTGTGCAGGGTGCATCGACGGCACTGCATCAGGAAGCTATGAACGGTCTAACCCAGGAGCTGGAGCCGCCTACACC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | GGACTGGATGGGACCAGAACTGGAGGGTGGGGCACAGAAGAGCATTaGTGGTGCGGGACTAGGGGTCCCGCTCAAGGGCATGTAATACAT | + |
|
Preference number: 5 (lower is better) Translates to: GLDGTRTGGWGTEEH*WCGTRGPAQGHVIH Trigger: ATGTATTACATGCCCTTGAGCGGGACCCCTAGTCCCGCACCACCAATGCTCTTCTGTGCCCCACCCTCCAGTTCTGGTCCCATCCAGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGACACCCTGAGTCCATaGGGGAAGTGGTGGTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLSVQELLVPLAVSTATLDTLSP*GKWWWG Trigger: TCCCCACCACCACTTCCCCAATGGACTCAGGGTGTC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TGCCTCTCTGTCCAGGAGCTGCTTGTCCCATTGGCTGTCTCTACAGCAACCCTGGTAGTCTTAACCATCTaGCGCACGTCTCGCGGCCGC | + |
|
Preference number: 5 (lower is better) Translates to: CLSVQELLVPLAVSTATLVVLTI*RTSRGR Trigger: GCGGCCGCGAGACGTGCGCAAGATGGTTAAGACTAC...CAGGGTTGCTGTAGAGACAGCCAATGGGACAAGCAGCTCCTGGACAGAGAGGCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS TCA 90 bp | CTGGGCCTCACAACCCTACTGGGAACCACCCGGGAACCTCTAGAATaGAAAGGAGGACTCCGTGCTCTCGGCACGGTTCTATCAGGAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGLTTLLGTTREPLE*KGGLRALGTVLSGV Trigger: GACTCCTGATAGAACCGTGCCGAGAGCACGGAGTCCTCCTTTTCATTCTAGAGGTTCCCGGGTGGTTCCCAGTAGGGTTGTGAGGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 90 bp | GTTCCCAACTCTAGCGACACCCTGAGTCCATTGGGGAAGTGGTGGTaGGGAAGGGGTCCTTCTGCTGACGACTTCCTCGACGGAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: VPNSSDTLSPLGKWW*GRGPSADDFLDGSI Trigger: AATGCTTCCGTCGAGGAAGTCGTCAGCAGAAGGACCCCTTCCCCACCACCACTTCCCCAATGGACTCAGGGTGTCGCTAGAGTTGGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGGGAAACACAGAACCCTaGCTGGACTGGATGGGACCA | + |
|
Preference number: 5 (lower is better) Translates to: SLALSLPQAQSRQSTGLGGNTEP*LDWMGP Trigger: TGGTCCCATCCAGTCCAGCAAGGGTTCTGTGTTTCC...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS CCA 90 bp | GCCTCTCGAATTCGGAACCTTCCACACAAGAGGAGCTTCAGGACATaGGTTCCCAACTCTAGCGACACCCTGAGTCCATTGGGGAAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ASRIRNLPHKRSFRT*VPNSSDTLSPLGKW Trigger: CCACTTCCCCAATGGACTCAGGGTGTCGCTAGAGTTGGGAACCCATGTCCTGAAGCTCCTCTTGTGTGGAAGGTTCCGAATTCGAGAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS-3UTR CAA 90 bp | TCTCTGGCCCTCAGTTTACCCCAGGCTCAGAGCAGACAGAGCACAGGTTTAGGGGTCGTGGATTCTGGCTaGGCGGTAGACTTAAAAGTG | + |
|
Preference number: 5 (lower is better) Translates to: SLALSLPQAQSRQSTGLGVVDSG*AVDLKV Trigger: CACTTTTAAGTCTACCGCCAAGCCAGAATCCACGAC...CCCTAAACCTGTGCTCTGTCTGCTCTGAGCCTGGGGTAAACTGAGGGCCAGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CGCAGGAGCAGTCGGGGACGCGGCGCGCGACTGTCCTaGGAGGGACTCCGAGGCCGCGGACGCAGCTCGATC | + |
|
Preference number: 6 (lower is better) Translates to: RRSSRGRGARLS*EGLRGRGRSSI Trigger: GATCGAGCTGCGTCCGCGGCCTCGGAGTCCCTCGCAGGACAGTCGCGCGCCGCGTCCCCGACTGCTCCTGCG 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | GTCGGTGGGAGGCGCAGAAGCAGCTCGCGGGAAGGGTaGAGCGGCCCTGGCTGCCGTCGCCGGATGATCGGG | + |
|
Preference number: 6 (lower is better) Translates to: VGGRRRSSSREG*SGPGCRRRMIG Trigger: CCCGATCATCCGGCGACGGCAGCCAGGGCCGCTGCACCCTTCCCGCGAGCTGCTTCTGCGCCTCCCACCGAC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CCCGGGCCTCGCGGGAAACCCGAGCCGGAGCCGTGCTaGTGGCGGCTATTCTGGGCGCTGACGGACAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PGPRGKPEPEPC*WRLFWALTDRT Trigger: TGTCCTGTCCGTCAGCGCCCAGAATAGCCGCCAGCAGCACGGCTCCGGCTCGGGTTTCCCGCGAGGCCCGGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CCTGCAAGCGGCTCAGAGACTCGTCCAGGGAGCCCGTaGGCAGGAGCAGTCGGGGACGCGGCGCGCGACTGT | + |
|
Preference number: 6 (lower is better) Translates to: PASGSETRPGSP*AGAVGDAARDC Trigger: ACAGTCGCGCGCCGCGTCCCCGACTGCTCCTGCGCACGGGCTCCCTGGACGAGTCTCTGAGCCGCTTGCAGG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CTAGCCAGCGCCGTCTGCACGATGCCCGCGGCGGCCTaGAAGCGGCTCAGAGACTCGTCCAGGGAGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LASAVCTMPAAA*KRLRDSSREPV Trigger: CACGGGCTCCCTGGACGAGTCTCTGAGCCGCTTGCAGGCCGCCGCGGGCATCGTGCAGACGGCGCTGGCTAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | TCCGGCGCTGCCCTAAGGCTCGAGTTTGGACACGCCTaGGGGGAGCCGGGGCGAGGTGGTCGCGTCCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGAALRLEFGHA*GEPGRGGRVPV Trigger: GACAGGGACGCGACCACCTCGCCCCGGCTCCCCGCAGGCGTGTCCAAACTCGAGCCTTAGGGCAGCGCCGGA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | GGGCCTCGCGGGAAACCCGAGCCGGAGCCGTGCTGCTaGCGGCTATTCTGGGCGCTGACGGACAGGACAGGC | + |
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Preference number: 6 (lower is better) Translates to: GPRGKPEPEPCC*RLFWALTDRTG Trigger: GCCTGTCCTGTCCGTCAGCGCCCAGAATAGCCGCCAGCAGCACGGCTCCGGCTCGGGTTTCCCGCGAGGCCC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | CTGCGCTCCTCCAGGGCCACCTCCACACACTCGTACTaGCCTGAGACGGCAGGACTCGGCTCGCGGGGCGGC | + |
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Preference number: 6 (lower is better) Translates to: LRSSRATSTHSY*PETAGLGSRGG Trigger: GCCGCCCCGCGAGCCGAGTCCTGCCGTCTCAGGCCAGTACGAGTGTGTGGAGGTGGCCCTGGAGGAGCGCAG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | CTCCTCCAGGGCCACCTCCACACACTCGTACTGGCCTaGGACGGCAGGACTCGGCTCGCGGGGCGGCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLQGHLHTLVLA*DGRTRLAGRQL Trigger: GAGCTGCCGCCCCGCGAGCCGAGTCCTGCCGTCTCAGGCCAGTACGAGTGTGTGGAGGTGGCCCTGGAGGAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | GGGAAGGGTGCAGCGGCCCTGGCTGCCGTCGCCGGATaGTCGGGAAGTAGGGGCGCCTGGACCGCAGTTGCA | + |
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Preference number: 6 (lower is better) Translates to: GKGAAALAAVAG*SGSRGAWTAVA Trigger: TGCAACTGCGGTCCAGGCGCCCCTACTTCCCGATCATCCGGCGACGGCAGCCAGGGCCGCTGCACCCTTCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 72 bp | CTAACTGGACCCAGAGGCTCGGTCCCGGGCGCCGGCTaGTCCCGCCGAATCGCTCGCTCTCGGAGGCTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LTGPRGSVPGAG*SRRIARSRRLG Trigger: GCCTAGCCTCCGAGAGCGAGCGATTCGGCGGGACAAGCCGGCGCCCGGGACCGAGCCTCTGGGTCCAGTTAG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 90 bp | ATGCTGGAACTAACTGGACCCAGAGGCTCGGTCCCGGGCGCCGGCTaGTCCCGCCGAATCGCTCGCTCTCGGAGGCTAGGCCAAGGCCGC | + |
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Preference number: 6 (lower is better) Translates to: MLELTGPRGSVPGAG*SRRIARSRRLGQGR Trigger: GCGGCCTTGGCCTAGCCTCCGAGAGCGAGCGATTCGGCGGGACAAGCCGGCGCCCGGGACCGAGCCTCTGGGTCCAGTTAGTTCCAGCAT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | TGCGAGGGACTCCGAGGCCGCGGACGCAGCTCGATCTaGCGTTTCGGCACAGTGCGGGGTCTAACGGGCGCG | + |
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Preference number: 6 (lower is better) Translates to: CEGLRGRGRSSI*RFGTVRGLTGA Trigger: CGCGCCCGTTAGACCCCGCACTGTGCCGAAACGTCAGATCGAGCTGCGTCCGCGGCCTCGGAGTCCCTCGCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CTCACTTCGAGCGAAAGGCTTCGCGGTGCTGTTCTCTaGCCGCCGCCTCGGGACCCCGCTGGACTGGGAGGC | + |
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Preference number: 6 (lower is better) Translates to: LTSSERLRGAVL*PPPRDPAGLGG Trigger: GCCTCCCAGTCCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCGAAGCCTTTCGCTCGAAGTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | GGGACCGCAGAGCCTAGTTTTCTAGCCAGCGCCGTCTaGACGATGCCCGCGGCGGCCTGCAAGCGGCTCAGA | + |
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Preference number: 6 (lower is better) Translates to: GTAEPSFLASAV*TMPAAACKRLR Trigger: TCTGAGCCGCTTGCAGGCCGCCGCGGGCATCGTGCAGACGGCGCTGGCTAGAAAACTAGGCTCTGCGGTCCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | GCAAGCGGATCTCACTTCGAGCGAAAGGCTTCGCGGTaGTGTTCTCTGCCCGCCGCCTCGGGACCCCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ASGSHFERKASR*CSLPAASGPRW Trigger: CCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAGCACCGCGAAGCCTTTCGCTCGAAGTGAGATCCGCTTGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | ACCCGTTTGGAGCCTGCTGCGGAGGAGAGGGGCTCCTaGGCCTCACAACCCTACTGGGAACCACCCGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: TRLEPAAEERGS*ASQPYWEPPGN Trigger: GTTCCCGGGTGGTTCCCAGTAGGGTTGTGAGGCCCAGGAGCCCCTCTCCTCCGCAGCAGGCTCCAAACGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | CTGTTCTCTGCCCGCCGCCTCGGGACCCCGCTGGACTaGGAGGCATCCTTAGGGGTTGCATGGAGTGAAGGC | + |
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Preference number: 6 (lower is better) Translates to: LFSARRLGTPLD*EASLGVAWSEG Trigger: GCCTTCACTCCATGCAACCCCTAAGGATGCCTCCCAGTCCAGCGGGGTCCCGAGGCGGCGGGCAGAGAACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | AACATTGGGTTGAGGTGCGAGCGCCTCCTAAAGGGCTaGTCCGACCCTCAGGGTCCCGGACCAGGCGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: NIGLRCERLLKG*SDPQGPGPGAG Trigger: CCCAGCGCCTGGTCCGGGACCCTGAGGGTCGGACCAGCCCTTTAGGAGGCGCTCGCACCTCAACCCAATGTT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 90 bp | GGCGCCATGAGCTGTTGCTCCTGCAGATCCTCCGCGTCGGAGCGGTaGAACAGAGGCCCCGCGCCGAAGATGACTTCCATCTCCCCCGAC | + |
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Preference number: 6 (lower is better) Translates to: GAMSCCSCRSSASER*NRGPAPKMTSISPD Trigger: GTCGGGGGAGATGGAAGTCATCTTCGGCGCGGGGCCTCTGTTCAACCGCTCCGACGCGGAGGATCTGCAGGAGCAACAGCTCATGGCGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | ACCAAGGGCCGACAGGTTGGGGGACAGCGGCGACAGTaGTGGACCAGAGATAGGCCCATAGGCGGGCGGGTA | + |
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Preference number: 6 (lower is better) Translates to: TKGRQVGGQRRQ*WTRDRPIGGRV Trigger: TACCCGCCCGCCTATGGGCCTATCTCTGGTCCATCACTGTCGCCGCTGTCCCCCAACCTGTCGGCCCTTGGT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | GTCTCTCCGGGAGATGGGGTACGCGTTTCAATAGGATaGGGTGCTTCCCGCGGGAGCAGGGCTGGCAGCGAC | + |
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Preference number: 6 (lower is better) Translates to: VSPGDGVRVSIG*GASRGSRAGSD Trigger: GTCGCTGCCAGCCCTGCTCCCGCGGGAAGCACCTCATCCTATTGAAACGCGTACCCCATCTCCCGGAGAGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | TCCGGGAGATGGGGTACGCGTTTCAATAGGATGAGGTaGTTCCCGCGGGAGCAGGGCTGGCAGCGACGAGTC | + |
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Preference number: 6 (lower is better) Translates to: SGRWGTRFNRMR*FPREQGWQRRV Trigger: GACTCGTCGCTGCCAGCCCTGCTCCCGCGGGAAGCACCTCATCCTATTGAAACGCGTACCCCATCTCCCGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | CCGCGTCTTTGGACACTCGGGGTTTTCTCCCGCCGCTaGCCGAAAGCTAGAGCGCCAGGCAAGCGGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: PRLWTLGVFSRR*PKARAPGKRIS Trigger: TGAGATCCGCTTGCCTGGCGCTCTAGCTTTCGGCCAGCGGCGGGAGAAAACCCCGAGTGTCCAAAGACGCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | GGACTGCTGAAGGTAGGCGCCATGAGCTGTTGCTCCTaGAGATCCTCCGCGTCGGAGCGGTTGAACAGAGGC | + |
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Preference number: 6 (lower is better) Translates to: GLLKVGAMSCCS*RSSASERLNRG Trigger: GCCTCTGTTCAACCGCTCCGACGCGGAGGATCTGCAGGAGCAACAGCTCATGGCGCCTACCTTCAGCAGTCC 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | AGCTGGGGACTGCTGAAGGTAGGCGCCATGAGCTGTTaGTCCTGCAGATCCTCCGCGTCGGAGCGGTTGAAC | + |
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Preference number: 6 (lower is better) Translates to: SWGLLKVGAMSC*SCRSSASERLN Trigger: GTTCAACCGCTCCGACGCGGAGGATCTGCAGGAGCAACAGCTCATGGCGCCTACCTTCAGCAGTCCCCAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CGACGGAAGCATTCCGATTTTCCCACGCAGAGGATGTaGCGCCAGGGAAGGCCGGGCTGCTCCGTCTCCAAA | + |
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Preference number: 6 (lower is better) Translates to: RRKHSDFPTQRM*RQGRPGCSVSK Trigger: TTTGGAGACGGAGCAGCCCGGCCTTCCCTGGCGGCACATCCTCTGCGTGGGAAAATCGGAATGCTTCCGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | CGCAGGAGGCGCGGGAAGCCCGGAGCCTGGGGTCCCTaGAGGGAAGCTTGGTGCATAAGTAGTCTTAACCAT | + |
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Preference number: 6 (lower is better) Translates to: RRRRGKPGAWGP*REAWCISSLNH Trigger: ATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCCGCGCCTCCTGCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS GCA 72 bp | GGAGAGGGCGAGGGTGGCAGCAGTACTTCCACGTACTaGCCGCTCTCGGGATCGAAAAGTAGTCGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: GEGEGGSSTSTY*PLSGSKSSRSL Trigger: GAGGCTGCGACTACTTTTCGATCCCGAGAGCGGGCAGTACGTGGAAGTACTGCTGCCACCCTCGCCCTCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 72 bp | AGCTGTTGCTCCTGCAGATCCTCCGCGTCGGAGCGGTaGAACAGAGGCCCCGCGCCGAAGATGACTTCCATC | + |
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Preference number: 6 (lower is better) Translates to: SCCSCRSSASER*NRGPAPKMTSI Trigger: GATGGAAGTCATCTTCGGCGCGGGGCCTCTGTTCAACCGCTCCGACGCGGAGGATCTGCAGGAGCAACAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 72 bp | CAGCTGGGGACTGCTGAAGGTAGGCGCCATGAGCTGTaGCTCCTGCAGATCCTCCGCGTCGGAGCGGTTGAA | + |
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Preference number: 6 (lower is better) Translates to: QLGTAEGRRHEL*LLQILRVGAVE Trigger: TTCAACCGCTCCGACGCGGAGGATCTGCAGGAGCAACAGCTCATGGCGCCTACCTTCAGCAGTCCCCAGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | GACTCTGGCAGAGGAGGAATTATCGTGCGCGCGGGGTaGCCGAGACTTAGCCTCTTCCAGGAGCACACGAGT | + |
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Preference number: 6 (lower is better) Translates to: DSGRGGIIVRAG*PRLSLFQEHTS Trigger: ACTCGTGTGCTCCTGGAAGAGGCTAAGTCTCGGCCACCCCGCGCGCACGATAATTCCTCCTCTGCCAGAGTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CAA 72 bp | GCCCAAGGTAGCTGGAGACTACCAAGGGCCGACAGGTaGGGGGACAGCGGCGACAGTGATGGACCAGAGATA | + |
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Preference number: 6 (lower is better) Translates to: AQGSWRLPRADR*GDSGDSDGPEI Trigger: TATCTCTGGTCCATCACTGTCGCCGCTGTCCCCCAACCTGTCGGCCCTTGGTAGTCTCCAGCTACCTTGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | CGGGCTGCTCCGTCTCCAAACAATCTTAGAAGGTTGTaGGGGGTTGTGGGGAGACCCGTTTGGAGCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: RAAPSPNNLRRL*GVVGRPVWSLL Trigger: CAGCAGGCTCCAAACGGGTCTCCCCACAACCCCCCACAACCTTCTAAGATTGTTTGGAGACGGAGCAGCCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | TCTAGCGACACCCTGAGTCCATTGGGGAAGTGGTGGTaGGGAAGGGGTCCTTCTGCTGACGACTTCCTCGAC | + |
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Preference number: 6 (lower is better) Translates to: SSDTLSPLGKWW*GRGPSADDFLD Trigger: GTCGAGGAAGTCGTCAGCAGAAGGACCCCTTCCCCACCACCACTTCCCCAATGGACTCAGGGTGTCGCTAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | GGGAAGCCCGGAGCCTGGGGTCCCTGCAGGGAAGCTTaGTGCATAAGTAGTCTTAACCATCTTGCGCACGTC | + |
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Preference number: 6 (lower is better) Translates to: GKPGAWGPCREA*CISSLNHLAHV Trigger: GACGTGCGCAAGATGGTTAAGACTACTTATGCACCAAGCTTCCCTGCAGGGACCCCAGGCTCCGGGCTTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | ACACAGAACCCTTGCTGGACTGGATGGGACCAGAACTaGAGGGTGGGGCACAGAAGAGCATTGGTGGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: TQNPCWTGWDQN*RVGHRRALVVR Trigger: CCGCACCACCAATGCTCTTCTGTGCCCCACCCTCCAGTTCTGGTCCCATCCAGTCCAGCAAGGGTTCTGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | GGCTCCAGCTCCTGGGTTAGACCGTTCATAGCTTCCTaGTGCAGTGCCGTCGATGCACCCTGCACAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: GSSSWVRPFIAS*CSAVDAPCTTG Trigger: TCCTGTTGTGCAGGGTGCATCGACGGCACTGCATCAGGAAGCTATGAACGGTCTAACCCAGGAGCTGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | TTGACCGCCTCTGACGGCGATACCCGCATTTTCCAGTaGGAGCAGACACAGAGCCTCTGTGAGCTCTGGAGT | + |
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Preference number: 6 (lower is better) Translates to: LTASDGDTRIFQ*EQTQSLCELWS Trigger: ACTCCAGAGCTCACAGAGGCTCTGTGTCTGCTCTCACTGGAAAATGCGGGTATCGCCGTCAGAGGCGGTCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS TCA 72 bp | ACAACCCTACTGGGAACCACCCGGGAACCTCTAGAATaGAAAGGAGGACTCCGTGCTCTCGGCACGGTTCTA | + |
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Preference number: 6 (lower is better) Translates to: TTLLGTTREPLE*KGGLRALGTVL Trigger: TAGAACCGTGCCGAGAGCACGGAGTCCTCCTTTTCATTCTAGAGGTTCCCGGGTGGTTCCCAGTAGGGTTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | GCTGTCTGTCGTCTCCTGAGAGTTCGTCGTGGATTCTaGCTTGGCGGTAGACTTAAAAGTGACGTTGCTGGG | + |
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Preference number: 6 (lower is better) Translates to: AVCRLLRVRRGF*LGGRLKSDVAG Trigger: CCCAGCAACGTCACTTTTAAGTCTACCGCCAAGCCAGAATCCACGACGAACTCTCAGGAGACGACAGACAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | ATTCGGAACCTTCCACACAAGAGGAGCTTCAGGACATaGGTTCCCAACTCTAGCGACACCCTGAGTCCATTG | + |
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Preference number: 6 (lower is better) Translates to: IRNLPHKRSFRT*VPNSSDTLSPL Trigger: CAATGGACTCAGGGTGTCGCTAGAGTTGGGAACCCATGTCCTGAAGCTCCTCTTGTGTGGAAGGTTCCGAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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| CDS CCA 72 bp | CGGTTCTATCAGGAGTCTCACGGGGAAACTGGGTCTTaGATTCCTGTTTGTAAGCCTGATGAGGTTTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: RFYQESHGETGS*IPVCKPDEVSP Trigger: AGGAGAAACCTCATCAGGCTTACAAACAGGAATCCAAGACCCAGTTTCCCCGTGAGACTCCTGATAGAACCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000097619.2 ENSMUST00000190196.5 |
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