Pregenerated sensors for PRND (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027338Ensembl transcript IDs: ENSMUST00000110169.2, ENSMUST00000110170.8, ENSMUST00000110171.9, ENSMUST00000110172.9
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCTaGTTCATGTCCCTTTACCATGTGACACCTGCCAGAGGTGTCCTT | + |
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Preference number: 1 (lower is better) Translates to: GWFLWAVCPVVKVPP*FMSLYHVTPARGVL Trigger: AAGGACACCTCTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CCA 90 bp | TACACGTTGTACTTTCAGAACACTCGGGGGCTAGATAGAGAGAACTaGGCTACCTCTGTCTACCTTTGCCCACCAGCTCACCTCTGTGGC | + |
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Preference number: 1 (lower is better) Translates to: YTLYFQNTRGLDREN*ATSVYLCPPAHLCG Trigger: GCCACAGAGGTGAGCTGGTGGGCAAAGGTAGACAGAGGTAGCCCAGTTCTCTCTATCTAGCCCCCGAGTGTTCTGAAAGTACAACGTGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR TCA 90 bp | CTGCTTCATGTCCCTTTACCATGTGACACCTGCCAGAGGTGTCCTTaGGAAGAACCGATTGCACTGGGAACTCAGCACTCGAAGTACTGC | + |
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Preference number: 1 (lower is better) Translates to: LLHVPLPCDTCQRCP*EEPIALGTQHSKYC Trigger: GCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | ACACCAGTCCTTGTGAAGACGCATCTAGACACCACAAACACATCCTaGCCTGAAGCTGCTCTCCGGGAGGTGCATAGCAAATTTCCCTAC | + |
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Preference number: 1 (lower is better) Translates to: TPVLVKTHLDTTNTS*PEAALREVHSKFPY Trigger: GTAGGGAAATTTGCTATGCACCTCCCGGAGAGCAGCTTCAGGGCAGGATGTGTTTGTGGTGTCTAGATGCGTCTTCACAAGGACTGGTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR CCA 90 bp | CATGTGACACCTGCCAGAGGTGTCCTTGAGAAGAACCGATTGCACTaGGAACTCAGCACTCGAAGTACTGCTATCAGCACTCGTGTTCTG | + |
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Preference number: 1 (lower is better) Translates to: HVTPARGVLEKNRLH*ELSTRSTAISTRVL Trigger: CAGAACACGAGTGCTGATAGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGGTGTCACATG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | AGACAGTGTTTGCAGAGAGCTCTGTGCGCAGTGAGCATCTTAAGATaGCTAAGAACACACATGCACATAGGGCCAGGGGACATCAGAAGT | + |
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Preference number: 1 (lower is better) Translates to: RQCLQRALCAVSILR*LRTHMHIGPGDIRS Trigger: ACTTCTGATGTCCCCTGGCCCTATGTGCATGTGTGTTCTTAGGCATCTTAAGATGCTCACTGCGCACAGAGCTCTCTGCAAACACTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR CCA 90 bp | TTACTCTGCTGTCAGTTTGCGCAATCTGTTCTACAGCGCACGGGTTaGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAG | + |
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Preference number: 1 (lower is better) Translates to: LLCCQFAQSVLQRTG*EHLEGLRKPLLIHK Trigger: CTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACAGATTGCGCAAACTGACAGCAGAGTAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | TGCAATGTGAGCCTCAGTTTCCTGGAGTTGGAAAATCAGGTGGAGTaGACAGGACAATTCTTGTATCCTTTGGCTGGTTTCTCACCTAGT | + |
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Preference number: 1 (lower is better) Translates to: CNVSLSFLELENQVE*TGQFLYPLAGFSPS Trigger: ACTAGGTGAGAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCACTCCACCTGATTTTCCAACTCCAGGAAACTGAGGCTCACATTGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | ACCAAAGTGGGTTTTAAAAACAGACAGTGTTTGCAGAGAGCTCTGTaGGCAGTGAGCATCTTAAGATGCCTAAGAACACACATGCACATA | + |
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Preference number: 1 (lower is better) Translates to: TKVGFKNRQCLQRAL*AVSILRCLRTHMHI Trigger: TATGTGCATGTGTGTTCTTAGGCATCTTAAGATGCTCACTGCGCACAGAGCTCTCTGCAAACACTGTCTGTTTTTAAAACCCACTTTGGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | AGTAAGAGCAAGGACGTCTCCGCTAAAAATCAAATAAGCGAAATTTaGAGTCAAAATCACATGGACACTCATTGGCTGTCACAGTTAGGC | + |
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Preference number: 1 (lower is better) Translates to: SKSKDVSAKNQISEI*SQNHMDTHWLSQLG Trigger: GCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCAAATTTCGCTTATTTGATTTTTAGCGGAGACGTCCTTGCTCTTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR TCA 90 bp | CACCAACATCACCATCTAAGAACTAACTATTCCTTCTTTATTGTCTaGTATTTAAAATGGCGTGCAAGGGGTAAACTGTGTGATCTGGGC | + |
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Preference number: 1 (lower is better) Translates to: HQHHHLRTNYSFFIV*YLKWRARGKLCDLG Trigger: GCCCAGATCACACAGTTTACCCCTTGCACGCCATTTTAAATATCAGACAATAAAGAAGGAATAGTTAGTTCTTAGATGGTGATGTTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 90 bp | AAGAACAATCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTaGAGCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGG | + |
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Preference number: 1 (lower is better) Translates to: KNNLKICQQGSYQVT*STSVLWNTSWSSKR Trigger: CCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGATTGTTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR TCA 90 bp | AGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGATGCCCTTGGGAGGGACTTTTaGAATGCCCTGAAACGCTAC | + |
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Preference number: 2 (lower is better) Translates to: RSGESGEVKTAGVDWWDALGRDF*NALKRY Trigger: GTAGCGTTTCAGGGCATTTCAAAAGTCCCTCCCAAG...GGCATCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | AGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCCGCTCAGCAACTCCTaGAGTCCTCTGTGGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: RLRRCVLAAVAYCSRLVSPLSNS*SPLWLP Trigger: TGGCAGCCACAGAGGACTCCAGGAGTTGCTGAGCGG...AGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110169.2 ENSMUST00000110171.9 |
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| 3UTR CAA 90 bp | GGGCCTGCTCTCTGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTaGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: GPALWFRISRLRRCV*AAVAYCSRLVSLGC Trigger: ACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCAGAGAGCAGGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | AGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGATGCCCTAGATAGAGAGAACTaGGCTACCTCTGTCTACCTT | + |
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Preference number: 2 (lower is better) Translates to: RSGESGEVKTAGVDWWDALDREN*ATSVYL Trigger: AAGGTAGACAGAGGTAGCCCAGTTCTCTCTATCTAG...GGCATCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCAGGTCTCACAGGGGTaGAGCATAGGGGCACTGAAA | + |
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Preference number: 2 (lower is better) Translates to: YCSRLVSLGCLSSGKGSAQVSQG*SIGALK Trigger: TTTCAGTGCCCCTATGCTCCACCCCTGTGAGACCTG...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGAGTAGGGGGAGTACTTaGGAGGGACTTTTGAAATGC | + |
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Preference number: 2 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLSRGST*EGLLKC Trigger: GCATTTCAAAAGTCCCTCCCAAGTACTCCCCCTACT...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | CGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGCTTGGACCTGAGTCTTaGAGGGATCAGGAGGCAGCT | + |
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Preference number: 2 (lower is better) Translates to: RTGWEHLEGLRKPLLIHKLGPES*RDQEAA Trigger: AGCTGCCTCCTGATCCCTCCAAGACTCAGGTCCAAG...CTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | TGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTGGTGAGGAAAACCTGTaGAAGAATCTCTGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: WRTAAGWFLWAVCPVVKVGEENL*KNLCGC Trigger: GCAGCCACAGAGATTCTTCCACAGGTTTTCCTCACC...AACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110170.8 |
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| 3UTR-3UTR CCA 90 bp | AGTGGTAAAGGTTCCGCCCTGCTTCATGTCCCTTTACCATGTGACACCTGCCAGACCAGCTCACCTCTGTaGCTGCCAGCTTCATTGATT | + |
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Preference number: 2 (lower is better) Translates to: SGKGSALLHVPLPCDTCQTSSPL*LPASLI Trigger: AATCAATGAAGCTGGCAGCCACAGAGGTGAGCTGGT...CTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR CAA 90 bp | CTTTACCATGTGACACCTGCCAGAGGTGTCCTTGAGAAGAACCGATaGCACTGGGAACTCAGCACTCGAAGTACTGCTATCAGCACTCGT | + |
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Preference number: 2 (lower is better) Translates to: LYHVTPARGVLEKNR*HWELSTRSTAISTR Trigger: ACGAGTGCTGATAGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGGTGTCACATGGTAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | CGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGTCCTGGAGTCCTCTGTaGCTGCCAGCTTCATTGATT | + |
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Preference number: 2 (lower is better) Translates to: RTGWEHLEGLRKPLLIHKSWSPL*LPASLI Trigger: AATCAATGAAGCTGGCAGCCACAGAGGACTCCAGGA...CTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110169.2 ENSMUST00000110171.9 |
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| 3UTR-3UTR CCA 90 bp | GGTGTCCTTGAGAAGAACCGATTGCACTGGGAACTCAGCACTCGAAGTACTGCTTCCTGGAGTCCTCTGTaGCTGCCAGCTTCATTGATT | + |
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Preference number: 2 (lower is better) Translates to: GVLEKNRLHWELSTRSTASWSPL*LPASLI Trigger: AATCAATGAAGCTGGCAGCCACAGAGGACTCCAGGA...AGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110169.2 ENSMUST00000110171.9 |
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| 3UTR-3UTR TCA 90 bp | GGTATCCACCGCCCTGGCCCTGTATTAGGATTGCAAATTGCTACATTTGCAGTTGAGGCCAGAAGATCATaGTTATGGGGTCAACCTGGG | + |
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Preference number: 2 (lower is better) Translates to: GIHRPGPVLGLQIATFAVEARRS*LWGQPG Trigger: CCCAGGTTGACCCCATAATCATGATCTTCTGGCCTC...AACTGCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACCCGCTCAGCAACTCCTaGAGTCCTCTGTGGCTGCCA | + |
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Preference number: 2 (lower is better) Translates to: PREFNGIPLNQEYKPQRNPLSNS*SPLWLP Trigger: TGGCAGCCACAGAGGACTCCAGGAGTTGCTGAGCGG...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000110169.2 ENSMUST00000110171.9 |
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| 3UTR-3UTR TCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTGCGAGTCTGGAGAGGTaGAAACGGCGGGCGTGGACT | + |
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Preference number: 2 (lower is better) Translates to: AHLYCGILHGHLKGLVRCASLER*KRRAWT Trigger: AGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGC...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR GCA 90 bp | CCAGAGGTGTCCTTGAGAAGAACCGATTGCACTGGGAACTCAGCACTCGAAGTAGAGGGACTTTTGAAATaGCCTGAAACGCTACACGTT | + |
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Preference number: 2 (lower is better) Translates to: PEVSLRRTDCTGNSALEVEGLLK*PETLHV Trigger: AACGTGTAGCGTTTCAGGGCATTTCAAAAGTCCCTC...TACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR CAA 90 bp | TTTACTCTGCTGTCAGTTTGCGCAATCTGTTCTACAGCGCACGGGTaGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAA | + |
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Preference number: 2 (lower is better) Translates to: FTLLSVCAICSTAHG*GTLRRAKKTSPDPQ Trigger: TTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACAGATTGCGCAAACTGACAGCAGAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CAA 90 bp | AGTTTCCTGGAGTTGGAAAATCAGGTGGAGTGCACAGGACAATTCTaGTATCCTTTGGCTGGTTTCTCACCTAGTGTAGCTGCAAAGGCA | + |
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Preference number: 2 (lower is better) Translates to: SFLELENQVECTGQF*YPLAGFSPSVAAKA Trigger: TGCCTTTGCAGCTACACTAGGTGAGAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCACTCCACCTGATTTTCCAACTCCAGGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTGCAGGCTGGTTTCTCTaGGCTGTCTGTCCAGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: AHLYCGILHGHLKGLVRCAGWFL*AVCPVV Trigger: TACCACTGGACAGACAGCCCAGAGAAACCAGCCTGC...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR TCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTTGCCAGAGGTGTCCTTaGGAAGAACCGATTGCACTG | + |
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Preference number: 2 (lower is better) Translates to: AHLYCGILHGHLKGLVRCCQRCP*EEPIAL Trigger: CAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCA...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR TCA 90 bp | GGTGTTTATTGTTTGCAAGATAAGAACAATCTGAAGATCTGTCAACAAGGAAGTGGGACTCCTGCAATGTaGGCCTCAGTTTCCTGGAGT | + |
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Preference number: 2 (lower is better) Translates to: GVYCLQDKNNLKICQQGSGTPAM*ASVSWS Trigger: ACTCCAGGAAACTGAGGCTCACATTGCAGGAGTCCC...ACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR TCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTTTAGGATCAGTAGACTaGGGAGGTGTGTCTTGGCAG | + |
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Preference number: 2 (lower is better) Translates to: AHLYCGILHGHLKGLVRCLGSVD*GGVSWQ Trigger: CTGCCAAGACACACCTCCTCAGTCTACTGATCCTAA...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACTCAGCACTCGTGTTCTaGAATGTTGCAGATGAATCC | + |
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Preference number: 2 (lower is better) Translates to: PREFNGIPLNQEYKPQRNSALVF*NVADES Trigger: GGATTCATCTGCAACATTCCAGAACACGAGTGCTGA...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CAA 90 bp | AAATCAAATAAGCGAAATTTGCAGTCAAAATCACATGGACACTCATaGGCTGTCACAGTTAGGCTTGTGGGTGTGACAACCAATGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: KSNKRNLQSKSHGHS*AVTVRLVGVTTNGL Trigger: CAGACCATTGGTTGTCACACCCACAAGCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCAAATTTCGCTTATTTGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | CCACTAAATCAGGAATACAAACCGCAGAGAAACAAATATTATACAAGTGATCGTACATATTGGGCTTGGTaGCATGTCTGCAATCCCAGC | + |
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Preference number: 2 (lower is better) Translates to: PLNQEYKPQRNKYYTSDRTYWAW*HVCNPS Trigger: GCTGGGATTGCAGACATGCCACCAAGCCCAATATGT...ACGATCACTTGTATAATATTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR-3UTR CCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTACATTATCAAACACATaGAGTAGGGGGAGTACTTGG | + |
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Preference number: 2 (lower is better) Translates to: AHLYCGILHGHLKGLVRCTLSNT*SRGSTW Trigger: CCAAGTACTCCCCCTACTCCATGTGTTTGATAATGT...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| 3UTR CCA 72 bp | TGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTaGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCTGC | + |
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Preference number: 3 (lower is better) Translates to: WQQWRTAAGWFL*AVCPVVKVPPC Trigger: GCAGGGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 72 bp | AGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTaGAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: RLRRCVLAAVAY*SRLVSLGCLSS Trigger: ACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CCA 72 bp | GGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTaGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTT | + |
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Preference number: 3 (lower is better) Translates to: GVSWQQWRTAAG*FLWAVCPVVKV Trigger: AACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR TCA 72 bp | GATCTGGGCCTGCTCTCTGGTTTAGGATCAGTAGACTaGGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCA | + |
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Preference number: 3 (lower is better) Translates to: DLGLLSGLGSVD*GGVSWQQWRTA Trigger: TGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCAGAGAGCAGGCCCAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR GCA 72 bp | CTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCTaGTTCATGTCCCTTTACCATGTGACACCTGCCAGA | + |
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Preference number: 3 (lower is better) Translates to: LWAVCPVVKVPP*FMSLYHVTPAR Trigger: TCTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACTGGACAGACAGCCCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR TCA 72 bp | GTCCCTTTACCATGTGACACCTGCCAGAGGTGTCCTTaGGAAGAACCGATTGCACTGGGAACTCAGCACTCG | + |
|
Preference number: 3 (lower is better) Translates to: VPLPCDTCQRCP*EEPIALGTQHS Trigger: CGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGGTGTCACATGGTAAAGGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | GCTGCAAAGGCAGGAACAGGCCAGGTCTCACAGGGGTaGAGCATAGGGGCACTGAAACACATTATCAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: AAKAGTGQVSQG*SIGALKHIIKH Trigger: GTGTTTGATAATGTGTTTCAGTGCCCCTATGCTCCACCCCTGTGAGACCTGGCCTGTTCCTGCCTTTGCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | CTTGTGAAGACGCATCTAGACACCACAAACACATCCTaGCCTGAAGCTGCTCTCCGGGAGGTGCATAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LVKTHLDTTNTS*PEAALREVHSK Trigger: TTTGCTATGCACCTCCCGGAGAGCAGCTTCAGGGCAGGATGTGTTTGTGGTGTCTAGATGCGTCTTCACAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | TACTTTCAGAACACTCGGGGGCTAGATAGAGAGAACTaGGCTACCTCTGTCTACCTTTGCCCACCAGCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YFQNTRGLDREN*ATSVYLCPPAH Trigger: GTGAGCTGGTGGGCAAAGGTAGACAGAGGTAGCCCAGTTCTCTCTATCTAGCCCCCGAGTGTTCTGAAAGTA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | CCTGCCAGAGGTGTCCTTGAGAAGAACCGATTGCACTaGGAACTCAGCACTCGAAGTACTGCTATCAGCACT | + |
|
Preference number: 3 (lower is better) Translates to: PARGVLEKNRLH*ELSTRSTAIST Trigger: AGTGCTGATAGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTTGCACAGGACAATTCTaGTATCCTTTGGCTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: WRTAAGWFLWAVCPVVKVCTGQF*YPLAGF Trigger: GAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCA...AACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | CAGGGGACATCAGAAGTAAACACATATTGGGCTTGGTaGCATGTCTGCAATCCCAGCATTCAGGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGTSEVNTYWAW*HVCNPSIQEAE Trigger: CTCTGCCTCCTGAATGCTGGGATTGCAGACATGCCACCAAGCCCAATATGTGTTTACTTCTGATGTCCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | TCAGAAGTAAACACATATTGGGCTTGGTGGCATGTCTaGAATCCCAGCATTCAGGAGGCAGAGGCCAGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEVNTYWAWWHV*NPSIQEAEARR Trigger: TCTTCTGGCCTCTGCCTCCTGAATGCTGGGATTGCAGACATGCCACCAAGCCCAATATGTGTTTACTTCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | CTGTCCAGCCTACACATTTTCACGCTGGAAGGAAGTTaGTTGTCTACAGCTTTGTGCACCCGGGTAACTAAG | + |
|
Preference number: 3 (lower is better) Translates to: LSSLHIFTLEGS*LSTALCTRVTK Trigger: CTTAGTTACCCGGGTGCACAAAGCTGTAGACAACCAACTTCCTTCCAGCGTGAAAATGTGTAGGCTGGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | TGTCAGTTTGCGCAATCTGTTCTACAGCGCACGGGTTaGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: CQFAQSVLQRTG*EHLEGLRKPLL Trigger: CAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACAGATTGCGCAAACTGACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | AGTAAACACATATTGGGCTTGGTGGCATGTCTGCAATCCCAGCATTCAGGAGGCACTTGGGAGGGACTTTaGAAATGCCCTGAAACGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SKHILGLVACLQSQHSGGTWEGL*KCPETL Trigger: TAGCGTTTCAGGGCATTTCAAAAGTCCCTCCCAAGT...GCCTCCTGAATGCTGGGATTGCAGACATGCCACCAAGCCCAATATGTGTTTACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR TCA 72 bp | ACACATGGAGTAGGGGGAGTACTTGGGAGGGACTTTTaGAATGCCCTGAAACGCTACACGTTGTACTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: THGVGGVLGRDF*NALKRYTLYFQ Trigger: CTGAAAGTACAACGTGTAGCGTTTCAGGGCATTTCAAAAGTCCCTCCCAAGTACTCCCCCTACTCCATGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR TCA 72 bp | TTATTTCCAGATCCCGCTCAGCAACTCCTGGAGTCCTaGAAGGTGAGGAAAACCTGTGGAAGAATCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LFPDPAQQLLES*KVRKTCGRISV Trigger: CACAGAGATTCTTCCACAGGTTTTCCTCACCTTTCAGGACTCCAGGAGTTGCTGAGCGGGATCTGGAAATAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110170.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTTACCTCTGTCTACCTTaGCCCACCAGCTCACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: SEDLSTRKLSSHLQHICTYLCLP*PTSSPL Trigger: CAGAGGTGAGCTGGTGGGCAAAGGTAGACAGAGGTA...AGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | TGTTCTACAGCGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTCAATTCTTGTATCCTTaGGCTGGTTTCTCACCTAGT | + |
|
Preference number: 3 (lower is better) Translates to: CSTAHGLGTLRRAKKTSPQFLYP*AGFSPS Trigger: ACTAGGTGAGAAACCAGCCAAAGGATACAAGAATTG...AGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | AGCCTCAGTTTCCTGGAGTTGGAAAATCAGGTGGAGTaGACAGGACAATTCTTGTATCCTTTGGCTGGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: SLSFLELENQVE*TGQFLYPLAGF Trigger: GAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCACTCCACCTGATTTTCCAACTCCAGGAAACTGAGGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | CTCTTCTGTTTTCTAACTGTGCTGGACAGGGACTCCTaGAATGTGAGCCTCAGTTTCCTGGAGTTGGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: LFCFLTVLDRDS*NVSLSFLELEN Trigger: ATTTTCCAACTCCAGGAAACTGAGGCTCACATTGCAGGAGTCCCTGTCCAGCACAGTTAGAAAACAGAAGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACCTGGAAGGAAGTTGGTaGTCTACAGCTTTGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: PREFNGIPLNQEYKPQRNLEGSW*STALCT Trigger: GGTGCACAAAGCTGTAGACAACCAACTTCCTTCCAG...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR TCA 72 bp | AATCCCAGCATTCAGGAGGCAGAGGCCAGAAGATCATaGTTATGGGGTCAACCTGGGCTACATAGAAAAATT | + |
|
Preference number: 3 (lower is better) Translates to: NPSIQEAEARRS*LWGQPGLHRKI Trigger: AATTTTTCTATGTAGCCCAGGTTGACCCCATAATCATGATCTTCTGGCCTCTGCCTCCTGAATGCTGGGATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | AACACATTATCAAACACATGGAGTAGGGGGAGTACTTaGGAGGGACTTTTGAAATGCCCTGAAACGCTACAC | + |
|
Preference number: 3 (lower is better) Translates to: NTLSNTWSRGST*EGLLKCPETLH Trigger: GTGTAGCGTTTCAGGGCATTTCAAAAGTCCCTCCCAAGTACTCCCCCTACTCCATGTGTTTGATAATGTGTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | TCAGCACTCGAAGTACTGCTATCAGCACTCGTGTTCTaGAATGTTGCAGATGAATCCTTTGACAATACCCGA | + |
|
Preference number: 3 (lower is better) Translates to: SALEVLLSALVF*NVADESFDNTR Trigger: TCGGGTATTGTCAAAGGATTCATCTGCAACATTCCAGAACACGAGTGCTGATAGCAGTACTTCGAGTGCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | GGTTTTAAAAACAGACAGTGTTTGCAGAGAGCTCTGTaGGCAGTGAGCATCTTAAGATGCCTAAGAACACAC | + |
|
Preference number: 3 (lower is better) Translates to: GFKNRQCLQRAL*AVSILRCLRTH Trigger: GTGTGTTCTTAGGCATCTTAAGATGCTCACTGCGCACAGAGCTCTCTGCAAACACTGTCTGTTTTTAAAACC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTCTGGAAGGAAGTTGGTaGTCTACAGCTTTGTGCACC | + |
|
Preference number: 3 (lower is better) Translates to: AHLYCGILHGHLKGLVRCLEGSW*STALCT Trigger: GGTGCACAAAGCTGTAGACAACCAACTTCCTTCCAG...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | CTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTGGACACCACTTCTTTATaGGGTCTTCCTAAAGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LKICQQGSYQVTCSTSVLDTTSL*GLPKDD Trigger: GTCATCTTTAGGAAGACCCAATAAAGAAGTGGTGTC...CAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | CTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTaGAGCACATCTGTACTGTGGAATACTTCATGGTCA | + |
|
Preference number: 3 (lower is better) Translates to: LKICQQGSYQVT*STSVLWNTSWS Trigger: TGACCATGAAGTATTCCACAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAG 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTTTATTGTTTGCAAGATAAGAACAATCTGAAGATCTGTCAACAAGGAAGTCTGAAACGCTACACGTaGTACTTTCAGAACACTCGG | + |
|
Preference number: 3 (lower is better) Translates to: GVYCLQDKNNLKICQQGSLKRYT*YFQNTR Trigger: CCGAGTGTTCTGAAAGTACAACGTGTAGCGTTTCAG...ACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR GCA 72 bp | AAGGACGTCTCCGCTAAAAATCAAATAAGCGAAATTTaGAGTCAAAATCACATGGACACTCATTGGCTGTCA | + |
|
Preference number: 3 (lower is better) Translates to: KDVSAKNQISEI*SQNHMDTHWLS Trigger: TGACAGCCAATGAGTGTCCATGTGATTTTGACTGCAAATTTCGCTTATTTGATTTTTAGCGGAGACGTCCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CCA 72 bp | ATGAAGTCAAATAAAACTTTAAGGTATCCACCGCCCTaGCCCTGTATTAGGATTGCAAATTGCTACATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: MKSNKTLRYPPP*PCIRIANCYIC Trigger: GCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACCTTAAAGTTTTATTTGACTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR TCA 72 bp | GTATGGGTGTTTATTGTTTGCAAGATAAGAACAATCTaGAGATCTGTCAACAAGGAAGTTATCAAGTCACTT | + |
|
Preference number: 3 (lower is better) Translates to: VWVFIVCKIRTI*RSVNKEVIKSL Trigger: AAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACCCATAC 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGCGGGAGAACTCAGCCTaGTTGGCCGCCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLRENSA*LAAWVA Trigger: CGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCG...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGATCTGGCCGCCGCTGCTaGGCAGGACCTTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: IKEWRVWRGENGGRGLVGSGRRC*AGPSGS Trigger: GGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGA...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | AGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCGGGAGAACTCAGCCTaGTTGGCCGCCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: RCVLAAVAYCSRLVSLGCRENSA*LAAWVA Trigger: CGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCG...ACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGACGGGAGAACTCAGCCTaGTTGGCCGCCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: IKEWRVWRGENGGRGLVGRENSA*LAAWVA Trigger: CGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCG...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGGGCTGGCAAGCAGCATaGAGAGGATGGCCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLGWQAA*RGWPPT Trigger: GGTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCC...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCGGGAGAACTCAGCCTaGTTGGCCGCCTGGGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: YCSRLVSLGCLSSGKGSARENSA*LAAWVA Trigger: CGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCG...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGATGCCCCGCGTAGTACCTGTTaGCCTCTGCTCCAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: RSGESGEVKTAGVDWWDAPRSTC*PLLQSR Trigger: TCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGG...GGCATCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGCCGTGGAGAGGTGGCTaGCAAGCAGCATGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLPWRGG*QAACRG Trigger: TCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGG...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTTGACCGTGGAGAGGTaGCTGGCAAGCAGCATGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GSSGVLQQAGFSGLSVQWLTVER*LASSMQ Trigger: CTGCATGCTGCTTGCCAGCCACCTCTCCACGGTCAA...CCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGATTATGCCCCTTGCCTTaGCCGTGGAGAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: IKEWRVWRGENGGRGLVGLCPLP*PWRGGW Trigger: CCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAA...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGCACAGGACTCGCTGGTaGAGCTTGCTATCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLHRTRW*SLLSCF Trigger: GAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTG...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGACCTTCCGGTTCCACTTaGACCTGTGCTTTATGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IKEWRVWRGENGGRGLVGPSGST*TCALCP Trigger: GGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGG...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCCGGAGCAGATCTCTTTaGTCAGCCGCCACAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: YCSRLVSLGCLSSGKGSARSRSL*SAATGL Trigger: GAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCG...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | AGTGGTAAAGGTTCCGCCCTGCTTCATGTCCCTTTACCATGTGACACCTGCCAGGGCTGGCAAGCAGCATaGAGAGGATGGCCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: SGKGSALLHVPLPCDTCQGWQAA*RGWPPT Trigger: GGTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCC...CTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | TGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCGGAGCAGATCTCTTTaGTCAGCCGCCACAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: WRTAAGWFLWAVCPVVKVRSRSL*SAATGL Trigger: GAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCG...AACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCCTGCTCTCTGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTTGGCACCGTGGAGAGGTGGCTaGCAAGCAGCATGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPALWFRISRLRRCVLAPWRGG*QAACRG Trigger: TCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGG...TGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCAGAGAGCAGGCCCAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCATCTCCTTGGTCACGTTaGCTTCAGAGCAGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: SWQQWRTAAGWFLWAVCPSPWSR*LQSSLR Trigger: ACGAAGGCTGCTCTGAAGCCAACGTGACCAAGGAGA...TGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | TGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCGTAGTACCTGTTaGCCTCTGCTCCAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WRTAAGWFLWAVCPVVKVPRSTC*PLLQSR Trigger: TCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGG...AACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGTAAGAGCAAGGACGTCTTCTGGCCGCCGCTGCTaGGCAGGACCTTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRRAKKTSPDPQVRARTSSGRRC*AGPSGS Trigger: GGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGA...AGACGTCCTTGCTCTTACTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: WFRISRLRRCVLAAVAYCLDEGS*AVLSYP Trigger: CGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAG...GCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCTCTCCTTGGTCACGTTaGCTTCAGAGCAGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: YCSRLVSLGCLSSGKGSASPWSR*LQSSLR Trigger: ACGAAGGCTGCTCTGAAGCCAACGTGACCAAGGAGA...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | AGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGTAAGAGCAAGGACGTCTCCGTTATGCCCCTTGCCTTaGCCGTGGAGAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRAKKTSPDPQVRARTSPLCPLP*PWRGGW Trigger: CCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAA...CGGAGACGTCCTTGCTCTTACTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | TGCAGTCAAAATCACATGGACACTCATTGGCTGTCACAGTTAGGCTTGTGGGTGGGCTGGCAAGCAGCATaGAGAGGATGGCCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: CSQNHMDTHWLSQLGLWVGWQAA*RGWPPT Trigger: GGTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCC...CACCCACAAGCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | TCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCATTCCACTTGAACCTGTaGTTTATGCCCCTTGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: SWQQWRTAAGWFLWAVCPFHLNL*FMPLAL Trigger: CAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAA...TGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | CGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: RTGWEHLEGLRKPLLIHKLDEGS*AVLSYP Trigger: CGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAG...CTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TCTGGGCCTGCTCTCTGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTTGGCACACAGGACTCGCTGGTaGAGCTTGCTATCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGPALWFRISRLRRCVLAHRTRW*SLLSCF Trigger: GAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTG...TGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCAGAGAGCAGGCCCAGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | CTCTGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTaGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LWFRISRLRRCV*AAVAYCSRLVS Trigger: AGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | TGTTCTACAGCGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTCGGAGCAGATCTCTTTaGTCAGCCGCCACAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: CSTAHGLGTLRRAKKTSPRSRSL*SAATGL Trigger: GAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCG...AGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTCAAAATCACATGGACACTCATTGGCTGTCACAGTTAGGCTTGTGGGTGCCGTGGAGAGGTGGCTaGCAAGCAGCATGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CSQNHMDTHWLSQLGLWVPWRGG*QAACRG Trigger: TCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGG...CACCCACAAGCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACTCTGGCCGCCGCTGCTaGGCAGGACCTTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PREFNGIPLNQEYKPQRNSGRRC*AGPSGS Trigger: GGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGA...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCTCTCCTTGGTCACGTTaGCTTCAGAGCAGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WFRISRLRRCVLAAVAYCSPWSR*LQSSLR Trigger: ACGAAGGCTGCTCTGAAGCCAACGTGACCAAGGAGA...GCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | GTGACACCTGCCAGAGGTGTCCTTGAGAAGAACCGATaGCACTGGGAACTCAGCACTCGAAGTACTGCTATC | + |
|
Preference number: 4 (lower is better) Translates to: VTPARGVLEKNR*HWELSTRSTAI Trigger: GATAGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACCTCTGGCAGGTGTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | GGTATCCACCGCCCTGGCCCTGTATTAGGATTGCAAATTGCTACATTTGCAGTTCGGAGCAGATCTCTTTaGTCAGCCGCCACAGGACTC | + |
|
Preference number: 4 (lower is better) Translates to: GIHRPGPVLGLQIATFAVRSRSL*SAATGL Trigger: GAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCG...AACTGCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | CGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RTGWEHLEGLRKPLLIHKVPVAL*SKVDVQ Trigger: CTGGACATCGACTTTGGAGCAGAGGGCAACAGGTAC...CTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | CTTAGAAGGGCTAAGAAAACCTCTCCTGATCCACAAGTAAGAGCAAGGACGTCTCCGTGGAGAGGTGGCTaGCAAGCAGCATGCAGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LRRAKKTSPDPQVRARTSPWRGG*QAACRG Trigger: TCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGG...AGACGTCCTTGCTCTTACTTGTGGATCAGGAGAGGTTTTCTTAGCCCTTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | GGTATCCACCGCCCTGGCCCTGTATTAGGATTGCAAATTGCTACATTTGCAGTTCCGCGTAGTACCTGTTaGCCTCTGCTCCAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GIHRPGPVLGLQIATFAVPRSTC*PLLQSR Trigger: TCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGG...AACTGCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | GCACATCTGTACTGTGGAATACTTCATGGTCATCTAAAAGGACTAGTTAGATGTTCTGGCCGCCGCTGCTaGGCAGGACCTTCCGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AHLYCGILHGHLKGLVRCSGRRC*AGPSGS Trigger: GGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGA...ACATCTAACTAGTCCTTTTAGATGACCATGAAGTATTCCACAGTACAGATGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TGCAGTCAAAATCACATGGACACTCATTGGCTGTCACAGTTAGGCTTGTGGGTGCACAGGACTCGCTGGTaGAGCTTGCTATCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CSQNHMDTHWLSQLGLWVHRTRW*SLLSCF Trigger: GAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTG...CACCCACAAGCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | CTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTGTTATGCCCCTTGCCTTaGCCGTGGAGAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LKICQQGSYQVTCSTSVLLCPLP*PWRGGW Trigger: CCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAA...CAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | GGTATCCACCGCCCTGGCCCTGTATTAGGATTGCAAATTGCTACATTTGCAGTTGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GIHRPGPVLGLQIATFAVVPVAL*SKVDVQ Trigger: CTGGACATCGACTTTGGAGCAGAGGGCAACAGGTAC...AACTGCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | CACATAGGGCCAGGGGACATCAGAAGTAAACACATATaGGGCTTGGTGGCATGTCTGCAATCCCAGCATTCA | + |
|
Preference number: 4 (lower is better) Translates to: HIGPGDIRSKHI*GLVACLQSQHS Trigger: TGAATGCTGGGATTGCAGACATGCCACCAAGCCCAATATGTGTTTACTTCTGATGTCCCCTGGCCCTATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | TCCAGCCTACACATTTTCACGCTGGAAGGAAGTTGGTaGTCTACAGCTTTGTGCACCCGGGTAACTAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLHIFTLEGSW*STALCTRVTKP Trigger: AGGCTTAGTTACCCGGGTGCACAAAGCTGTAGACAACCAACTTCCTTCCAGCGTGAAAATGTGTAGGCTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | CTGTCAGTTTGCGCAATCTGTTCTACAGCGCACGGGTaGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSVCAICSTAHG*GTLRRAKKTSP Trigger: AGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACAGATTGCGCAAACTGACAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACTCCAGCTTCCGGCCTTaGTTGATGAAGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: PREFNGIPLNQEYKPQRNSSFRP*LMKAPG Trigger: CCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGA...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | CTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTGTCCAGCTTCCGGCCTTaGTTGATGAAGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LKICQQGSYQVTCSTSVLSSFRP*LMKAPG Trigger: CCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGA...CAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | AGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACAAAGGCTGGCAAGCAGCATaGAGAGGATGGCCACCCACC | + |
|
Preference number: 4 (lower is better) Translates to: REFNGIPLNQEYKPQRNKGWQAA*RGWPPT Trigger: GGTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCC...TTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTTCCAGCTTCCGGCCTTaGTTGATGAAGGCTCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SEDLSTRKLSSHLQHICTSSFRP*LMKAPG Trigger: CCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGA...AGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: SEDLSTRKLSSHLQHICTLDEGS*AVLSYP Trigger: CGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAG...AGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR TCA 90 bp | AGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACAAATTATGCCCCTTGCCTTaGCCGTGGAGAGGTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: REFNGIPLNQEYKPQRNKLCPLP*PWRGGW Trigger: CCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAA...TTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | CCCAGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: PREFNGIPLNQEYKPQRNVPVAL*SKVDVQ Trigger: CTGGACATCGACTTTGGAGCAGAGGGCAACAGGTAC...GTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | AACACATGGAGTAGGGGGAGTACTTGGGAGGGACTTTaGAAATGCCCTGAAACGCTACACGTTGTACTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTWSRGSTWEGL*KCPETLHVVLS Trigger: TGAAAGTACAACGTGTAGCGTTTCAGGGCATTTCAAAAGTCCCTCCCAAGTACTCCCCCTACTCCATGTGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | AATCAGGTGGAGTGCACAGGACAATTCTTGTATCCTTaGGCTGGTTTCTCACCTAGTGTAGCTGCAAAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NQVECTGQFLYP*AGFSPSVAAKA Trigger: TGCCTTTGCAGCTACACTAGGTGAGAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCACTCCACCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| CDS-3UTR GCA 90 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SEDLSTRKLSSHLQHICTVPVAL*SKVDVQ Trigger: CTGGACATCGACTTTGGAGCAGAGGGCAACAGGTAC...AGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | GAGTTGGAAAATCAGGTGGAGTGCACAGGACAATTCTaGTATCCTTTGGCTGGTTTCTCACCTAGTGTAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ELENQVECTGQF*YPLAGFSPSVA Trigger: AGCTACACTAGGTGAGAAACCAGCCAAAGGATACAAGAATTGTCCTGTGCACTCCACCTGATTTTCCAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
||
| 3UTR CAA 72 bp | AAGCGAAATTTGCAGTCAAAATCACATGGACACTCATaGGCTGTCACAGTTAGGCTTGTGGGTGTGACAACC | + |
|
Preference number: 4 (lower is better) Translates to: KRNLQSKSHGHS*AVTVRLVGVTT Trigger: GGTTGTCACACCCACAAGCCTAACTGTGACAGCCAATGAGTGTCCATGTGATTTTGACTGCAAATTTCGCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CCA 90 bp | CCACTAAATCAGGAATACAAACCGCAGAGAAACAAATATTATACAAGTGATCGTCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: PLNQEYKPQRNKYYTSDRLDEGS*AVLSYP Trigger: CGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAG...ACGATCACTTGTATAATATTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR GCA 90 bp | GGTGTTTATTGTTTGCAAGATAAGAACAATCTGAAGATCTGTCAACAAGGAAGTCCGCGTAGTACCTGTTaGCCTCTGCTCCAAAGTCGA | + |
|
Preference number: 4 (lower is better) Translates to: GVYCLQDKNNLKICQQGSPRSTC*PLLQSR Trigger: TCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGG...ACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CCA 90 bp | GGTGTTTATTGTTTGCAAGATAAGAACAATCTGAAGATCTGTCAACAAGGAAGTCACAGGACTCGCTGGTaGAGCTTGCTATCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GVYCLQDKNNLKICQQGSHRTRW*SLLSCF Trigger: GAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTG...ACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CCA 90 bp | CCACTAAATCAGGAATACAAACCGCAGAGAAACAAATATTATACAAGTGATCGTTCTCCTTGGTCACGTTaGCTTCAGAGCAGCCTTCGT | + |
|
Preference number: 4 (lower is better) Translates to: PLNQEYKPQRNKYYTSDRSPWSR*LQSSLR Trigger: ACGAAGGCTGCTCTGAAGCCAACGTGACCAAGGAGA...ACGATCACTTGTATAATATTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CAA 72 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTaGCAGCACATCTGTACTGTGGAATACTTCATGGTC | + |
|
Preference number: 4 (lower is better) Translates to: SEDLSTRKLSSH*QHICTVEYFMV Trigger: GACCATGAAGTATTCCACAGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| 3UTR CAA 72 bp | ATATCAGTTCTTATGATGGTAGACACCACTTCTTTATaGGGTCTTCCTAAAGATGACATTTCTCTTAGGCTT | + |
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Preference number: 4 (lower is better) Translates to: ISVLMMVDTTSL*GLPKDDISLRL Trigger: AAGCCTAAGAGAAATGTCATCTTTAGGAAGACCCAATAAAGAAGTGGTGTCTACCATCATAAGAACTGATAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GSSGVLQQAGFSGLSVQWAAWVA*TQLVTS Trigger: GCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGC...CCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGAGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IKEWRVWRGENGGRGLVGAAWVA*TQLVTS Trigger: GCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGC...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS TCA 90 bp | GCTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCCTGGGTGGCGTTaGCGCAGCTGGTCACCAGCATCTCCTTGGTCACGTTGGCTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: ASPGRTQPGWPPGWR*RSWSPASPWSRWLQ Trigger: CTGAAGCCAACGTGACCAAGGAGATGCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | TGGCCGCCGCTGCTGGGCAGGACCTTCCGGTTCCACTTGAACCTGTaGTTTATGCCCCTTGCCTTGACCGTGGAGAGGTGGCTGGCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: WPPLLGRTFRFHLNL*FMPLALTVERWLAS Trigger: GCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | TCTTTGATCAGCCGCCACAGGACTCGCTGGTGGAGCTTGCTATCCTaGTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCCTGGGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: SLISRHRTRWWSLLS*FSRENSAWLAAWVA Trigger: CGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 90 bp | ATGAAGGCTCCTGGGCGGTTCTCAGCTACCCGAGCTTCGGTGATCTaGCCGCCGCTGCTGGGCAGGACCTTCCGGTTCCACTTGAACCTG | + |
|
Preference number: 5 (lower is better) Translates to: MKAPGRFSATRASVI*PPLLGRTFRFHLNL Trigger: CAGGTTCAAGTGGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGATCACCGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCTTCAT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | ACGGCGACCCGAAGCGCAGCTCCCCTTTCCAGCCAGAAATCGCAGTaGTTGGCGGAGCAGATCTCTTTGATCAGCCGCCACAGGACTCGC | + |
|
Preference number: 5 (lower is better) Translates to: TATRSAAPLSSQKSQ*LAEQISLISRHRTR Trigger: GCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCACTGCGATTTCTGGCTGGAAAGGGGAGCTGCGCTTCGGGTCGCCGT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 90 bp | TTGCTATCCTGCTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCCTaGGTGGCGTTGACGCAGCTGGTCACCAGCATCTCCTTGGTCACG | + |
|
Preference number: 5 (lower is better) Translates to: LLSCFSRENSAWLAA*VALTQLVTSISLVT Trigger: CGTGACCAAGGAGATGCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTGAGAACTCAGCCTGGTaGGCCGCCTGGGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: RCVLAAVAYCSRLVSLGCENSAW*AAWVAL Trigger: CAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTC...ACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 90 bp | TCCAAAGTCGATGTCCAGCTTCCGGCCTTGCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCGAGCTTCGGTGATCTGGCCGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SKVDVQLPALLDEGS*AVLSYPSFGDLAAA Trigger: AGCGGCGGCCAGATCACCGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | TGGTTTAGGATCAGTAGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: WFRISRLRRCVLAAVAYCAAWVA*TQLVTS Trigger: GCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGC...GCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCTACTGATCCTAAACCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGTGGTAAAGGTTCCGCCCTGCTTCATGTCCCTTTACCATGTGACACCTGCCAGGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGC | + |
|
Preference number: 5 (lower is better) Translates to: SGKGSALLHVPLPCDTCQAAWVA*TQLVTS Trigger: GCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGC...CTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCGAGAACTCAGCCTGGTaGGCCGCCTGGGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: YCSRLVSLGCLSSGKGSAENSAW*AAWVAL Trigger: CAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTC...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 90 bp | TGCTTGGCGGAGCAGATCTCTTTGATCAGCCGCCACAGGACTCGCTaGTGGAGCTTGCTATCCTGCTTCTCCCGGGAGAACTCAGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CLAEQISLISRHRTR*WSLLSCFSRENSAW Trigger: CCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTTTATGCCCCTTGCCTaGACCGTGGAGAGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVCLGSSGVLQQAGFSGLFMPLA*TVERWL Trigger: CAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAA...CAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLRRCVLAAVAYCSRLVSSFRPC*MKAPGR Trigger: CCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCT...AGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | TACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAGTGGTAAAGGTTCCGCCAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: YCSRLVSLGCLSSGKGSASFRPC*MKAPGR Trigger: CCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCT...GGCGGAACCTTTACCACTGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | TCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTCTGGGCTGTCTGTCCAACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: SWQQWRTAAGWFLWAVCPTRWWS*LSCFSR Trigger: CCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGT...TGGACAGACAGCCCAGAGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | GGGCAGGACCTTCCGGTTCCACTTGAACCTGTGCTTTATGCCCCTTaGCTTGACCGTGGAGAGGTGGCTGGCAAGCAGCATGCAGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GQDLPVPLEPVLYAP*LDRGEVAGKQHAED Trigger: ATCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCTGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | TACCTGTTGCCCTCTGCTCCAAAGTCGATGTCCAGCTTCCGGCCTTaGTTGATGAAGGCTCCTGGGCGGTTCTCAGCTACCCGAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: YLLPSAPKSMSSFRP*LMKAPGRFSATRAS Trigger: CGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGAGGGCAACAGGTA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 90 bp | CACTTGAACCTGTGCTTTATGCCCCTTGCCTTGACCGTGGAGAGGTaGCTGGCAAGCAGCATGCAGAGGATGGCCACCCACCATGTACCC | + |
|
Preference number: 5 (lower is better) Translates to: HLNLCFMPLALTVER*LASSMQRMATHHVP Trigger: GGGTACATGGTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGTGGTAAAGGTTCCGCCCTGCTTCATGTCCCTTTACCATGTGACACCTGCCAGGAGAACTCAGCCTGGTaGGCCGCCTGGGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SGKGSALLHVPLPCDTCQENSAW*AAWVAL Trigger: CAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTC...CTGGCAGGTGTCACATGGTAAAGGGACATGAAGCAGGGCGGAACCTTTACCACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS TCA 90 bp | CCCTTTCCAGCCAGAAATCGCAGTGCTTGGCGGAGCAGATCTCTTTaGTCAGCCGCCACAGGACTCGCTGGTGGAGCTTGCTATCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: PFPARNRSAWRSRSL*SAATGLAGGACYPA Trigger: AGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCACTGCGATTTCTGGCTGGAAAGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GGTGTCCTTGAGAAGAACCGATTGCACTGGGAACTCAGCACTCGAAGTACTGCTGAGAACTCAGCCTGGTaGGCCGCCTGGGTGGCGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVLEKNRLHWELSTRSTAENSAW*AAWVAL Trigger: CAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTC...AGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGACTGAGGAGGTGTGTCTTGGCAGCAGTGGCGTACTGCAGCAGGCTGGTTTCTGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: RLRRCVLAAVAYCSRLVSAEQIS*ISRHRT Trigger: AGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGC...AGAAACCAGCCTGCTGCAGTACGCCACTGCTGCCAAGACACACCTCCTCAGTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAGTGGCGAGTCTGGAGAGGTGAAAACGGCGGGCGTGGACTGGTGGGAACCTTCCGGTTCCACTaGAACCTGTGCTTTATGCCC | + |
|
Preference number: 5 (lower is better) Translates to: IKEWRVWRGENGGRGLVGTFRFH*NLCFMP Trigger: GGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGT...TCCCACCAGTCCACGCCCGCCGTTTTCACCTCTCCAGACTCGCCACTCCTTTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | ACAGGCCAGGTCTCACAGGGGTGGAGCATAGGGGCACTGAAACACATTATCAAAAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TGQVSQGWSIGALKHIIKSFRPC*MKAPGR Trigger: CCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCT...TTTGATAATGTGTTTCAGTGCCCCTATGCTCCACCCCTGTGAGACCTGGCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGATCCCGCTCAGCAACTCCTGGAGTCCTGAAAGGTGAGGAAAACCTGTGGAAGACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: RSRSATPGVLKGEENLWKTRWWS*LSCFSR Trigger: CCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGT...CTTCCACAGGTTTTCCTCACCTTTCAGGACTCCAGGAGTTGCTGAGCGGGATCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000110170.8 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GTAAAGGGGTACAAGTTTCATACTAGGGCAGAGGGAGGAGATGGGGCTGGAGAAACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VKGYKFHTRAEGGDGAGETRWWS*LSCFSR Trigger: CCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGT...TTCTCCAGCCCCATCTCCTCCCTCTGCCCTAGTATGAAACTTGTACCCCTTTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 90 bp | ATCAGGGAACTGCCAATAGTTAGCCGCGTAGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAGCTTCCGGCCTTGCTTGATGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: IRELPIVSRVVPVAL*SKVDVQLPALLDEG Trigger: GCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGGCTAACTATTGGCAGTTCCCTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GGTGTCCTTGAGAAGAACCGATTGCACTGGGAACTCAGCACTCGAAGTACTGCTGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: GVLEKNRLHWELSTRSTAAEQIS*ISRHRT Trigger: AGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGC...AGCAGTACTTCGAGTGCTGAGTTCCCAGTGCAATCGGTTCTTCTCAAGGACACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | TGTTCTACAGCGCACGGGTTGGGAACACTTAGAAGGGCTAAGAAAACCTCTCCTTTTATGCCCCTTGCCTaGACCGTGGAGAGGTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: CSTAHGLGTLRRAKKTSPFMPLA*TVERWL Trigger: CAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAA...AGGAGAGGTTTTCTTAGCCCTTCTAAGTGTTCCCAACCCGTGCGCTGTAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CAA 90 bp | TTAAGGTATCCACCGCCCTGGCCCTGTATTAGGATTGCAAATTGCTACATTTGCAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LRYPPPWPCIRIANCYICSFRPC*MKAPGR Trigger: CCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCT...GCAAATGTAGCAATTTGCAATCCTAATACAGGGCCAGGGCGGTGGATACCTTAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CAA 90 bp | TCTGAAGATCTGTCAACAAGGAAGTTATCAAGTCACTTGCAGCACATCTGTACTGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: SEDLSTRKLSSHLQHICTAEQIS*ISRHRT Trigger: AGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGC...AGTACAGATGTGCTGCAAGTGACTTGATAACTTCCTTGTTGACAGATCTTCAGA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
||
| CDS-3UTR CAA 90 bp | AGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACAAAACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGG | + |
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Preference number: 5 (lower is better) Translates to: REFNGIPLNQEYKPQRNKTRWWS*LSCFSR Trigger: CCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGT...TTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | AGAGAGTTTAATGGCATTCCACTAAATCAGGAATACAAACCGCAGAGAAACAAAGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACT | + |
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Preference number: 5 (lower is better) Translates to: REFNGIPLNQEYKPQRNKAEQIS*ISRHRT Trigger: AGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGC...TTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGGAATGCCATTAAACTCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | GGTGTTTATTGTTTGCAAGATAAGAACAATCTGAAGATCTGTCAACAAGGAAGTTTTATGCCCCTTGCCTaGACCGTGGAGAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: GVYCLQDKNNLKICQQGSFMPLA*TVERWL Trigger: CAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAA...ACTTCCTTGTTGACAGATCTTCAGATTGTTCTTATCTTGCAAACAATAAACACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS-3UTR CAA 90 bp | CCACTAAATCAGGAATACAAACCGCAGAGAAACAAATATTATACAAGTGATCGTTTTATGCCCCTTGCCTaGACCGTGGAGAGGTGGCTG | + |
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Preference number: 5 (lower is better) Translates to: PLNQEYKPQRNKYYTSDRFMPLA*TVERWL Trigger: CAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAA...ACGATCACTTGTATAATATTTGTTTCTCTGCGGTTTGTATTCCTGATTTAGTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS TCA 72 bp | AGGCTCCTGGGCGGTTCTCAGCTACCCGAGCTTCGGTaGTCTGGCCGCCGCTGCTGGGCAGGACCTTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: RLLGGSQLPELR*SGRRCWAGPSG Trigger: ACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGATCACCGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 72 bp | CCTGGGCGGTTCTCAGCTACCCGAGCTTCGGTGATCTaGCCGCCGCTGCTGGGCAGGACCTTCCGGTTCCAC | + |
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Preference number: 6 (lower is better) Translates to: PGRFSATRASVI*PPLLGRTFRFH Trigger: GTGGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGATCACCGAAGCTCGGGTAGCTGAGAACCGCCCAGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | AGCCGCCACAGGACTCGCTGGTGGAGCTTGCTATCCTaGTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: SRHRTRWWSLLS*FSRENSAWLAA Trigger: GGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 72 bp | CGGGAGAACTCAGCCTGGTTGGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGCATCTCCTTGGTCACG | + |
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Preference number: 6 (lower is better) Translates to: RENSAWLAAWVA*TQLVTSISLVT Trigger: CGTGACCAAGGAGATGCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS TCA 72 bp | GGGAGAACTCAGCCTGGTTGGCCGCCTGGGTGGCGTTaGCGCAGCTGGTCACCAGCATCTCCTTGGTCACGT | + |
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Preference number: 6 (lower is better) Translates to: GRTQPGWPPGWR*RSWSPASPWSR Trigger: ACGTGACCAAGGAGATGCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | TCGGTGATCTGGCCGCCGCTGCTGGGCAGGACCTTCCGGTTCCACTaGAACCTGTGCTTTATGCCCCTTGCCTTGACCGTGGAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: SVIWPPLLGRTFRFH*NLCFMPLALTVERW Trigger: CCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCAGATCACCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | TGCTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCCTGGGTGGCGTaGACGCAGCTGGTCACCAGCATCTCCTTGGTCACGTTGGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: CFSRENSAWLAAWVA*TQLVTSISLVTLAS Trigger: TGAAGCCAACGTGACCAAGGAGATGCTGGTGACCAGCTGCGTCAACGCCACCCAGGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 72 bp | TGGCCGCCGCTGCTGGGCAGGACCTTCCGGTTCCACTaGAACCTGTGCTTTATGCCCCTTGCCTTGACCGTG | + |
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Preference number: 6 (lower is better) Translates to: WPPLLGRTFRFH*NLCFMPLALTV Trigger: CACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCTGCCCAGCAGCGGCGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | GAGCAGATCTCTTTGATCAGCCGCCACAGGACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGGGAGAACTCAGCCTGGTTGGCCGCC | + |
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Preference number: 6 (lower is better) Translates to: EQISLISRHRTRWWS*LSCFSRENSAWLAA Trigger: GGCGGCCAACCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 72 bp | CTGTGCTTTATGCCCCTTGCCTTGACCGTGGAGAGGTaGCTGGCAAGCAGCATGCAGAGGATGGCCACCCAC | + |
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Preference number: 6 (lower is better) Translates to: LCFMPLALTVER*LASSMQRMATH Trigger: GTGGGTGGCCATCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | CTGTTGCCCTCTGCTCCAAAGTCGATGTCCAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGGTTCTCAGCTACCCGAGCTTCGGTG | + |
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Preference number: 6 (lower is better) Translates to: LLPSAPKSMSSFRPC*MKAPGRFSATRASV Trigger: CACCGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGAGGGCAACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | CTGCTGGGCAGGACCTTCCGGTTCCACTTGAACCTGTaGTTTATGCCCCTTGCCTTGACCGTGGAGAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: LLGRTFRFHLNL*FMPLALTVERW Trigger: CCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCTGCCCAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | CCCTCTGCTCCAAAGTCGATGTCCAGCTTCCGGCCTTaGTTGATGAAGGCTCCTGGGCGGTTCTCAGCTACC | + |
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Preference number: 6 (lower is better) Translates to: PSAPKSMSSFRP*LMKAPGRFSAT Trigger: GGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | CGAAGCGCAGCTCCCCTTTCCAGCCAGAAATCGCAGTaGTTGGCGGAGCAGATCTCTTTGATCAGCCGCCAC | + |
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Preference number: 6 (lower is better) Translates to: RSAAPLSSQKSQ*LAEQISLISRH Trigger: GTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCACTGCGATTTCTGGCTGGAAAGGGGAGCTGCGCTTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 72 bp | GATGTCCAGCTTCCGGCCTTGCTTGATGAAGGCTCCTaGGCGGTTCTCAGCTACCCGAGCTTCGGTGATCTG | + |
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Preference number: 6 (lower is better) Translates to: DVQLPALLDEGS*AVLSYPSFGDL Trigger: CAGATCACCGAAGCTCGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 72 bp | TCTTTGATCAGCCGCCACAGGACTCGCTGGTGGAGCTaGCTATCCTGCTTCTCCCGGGAGAACTCAGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: SLISRHRTRWWS*LSCFSRENSAW Trigger: CCAGGCTGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | AGGACCTTCCGGTTCCACTTGAACCTGTGCTTTATGCCCCTTGCCTaGACCGTGGAGAGGTGGCTGGCAAGCAGCATGCAGAGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: RTFRFHLNLCFMPLA*TVERWLASSMQRMA Trigger: GGCCATCCTCTGCATGCTGCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAGGTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 90 bp | CCCCTTTCCAGCCAGAAATCGCAGTGCTTGGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACTCGCTGGTGGAGCTTGCTATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PLSSQKSQCLAEQIS*ISRHRTRWWSLLSC Trigger: GCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCACTGCGATTTCTGGCTGGAAAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 72 bp | GAGCAGATCTCTTTGATCAGCCGCCACAGGACTCGCTaGTGGAGCTTGCTATCCTGCTTCTCCCGGGAGAAC | + |
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Preference number: 6 (lower is better) Translates to: EQISLISRHRTR*WSLLSCFSREN Trigger: GTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 72 bp | TCTGCTCCAAAGTCGATGTCCAGCTTCCGGCCTTGCTaGATGAAGGCTCCTGGGCGGTTCTCAGCTACCCGA | + |
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Preference number: 6 (lower is better) Translates to: SAPKSMSSFRPC*MKAPGRFSATR Trigger: TCGGGTAGCTGAGAACCGCCCAGGAGCCTTCATCAAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CAA 72 bp | AGCCAGAAATCGCAGTGCTTGGCGGAGCAGATCTCTTaGATCAGCCGCCACAGGACTCGCTGGTGGAGCTTG | + |
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Preference number: 6 (lower is better) Translates to: SQKSQCLAEQIS*ISRHRTRWWSL Trigger: CAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTGCTCCGCCAAGCACTGCGATTTCTGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | CTTCCGGTTCCACTTGAACCTGTGCTTTATGCCCCTTaGCTTGACCGTGGAGAGGTGGCTGGCAAGCAGCAT | + |
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Preference number: 6 (lower is better) Translates to: LPVPLEPVLYAP*LDRGEVAGKQH Trigger: ATGCTGCTTGCCAGCCACCTCTCCACGGTCAAGGCAAGGGGCATAAAGCACAGGTTCAAGTGGAACCGGAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS CCA 72 bp | CAGATCTCTTTGATCAGCCGCCACAGGACTCGCTGGTaGAGCTTGCTATCCTGCTTCTCCCGGGAGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: QISLISRHRTRW*SLLSCFSRENS Trigger: TGAGTTCTCCCGGGAGAAGCAGGATAGCAAGCTCCACCAGCGAGTCCTGTGGCGGCTGATCAAAGAGATCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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| CDS GCA 72 bp | CTGCCAATAGTTAGCCGCGTAGTACCTGTTGCCCTCTaGTCCAAAGTCGATGTCCAGCTTCCGGCCTTGCTT | + |
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Preference number: 6 (lower is better) Translates to: LPIVSRVVPVAL*SKVDVQLPALL Trigger: AAGCAAGGCCGGAAGCTGGACATCGACTTTGGAGCAGAGGGCAACAGGTACTACGCGGCTAACTATTGGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000110169.2 ENSMUST00000110170.8 ENSMUST00000110171.9 ENSMUST00000110172.9 |
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