Pregenerated sensors for PRMT9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037134Ensembl transcript IDs: ENSMUST00000056237.15, ENSMUST00000118622.2, ENSMUST00000210040.2
Found 215 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGTGTCCAGCCTCACCTCGTCATCCAGGCACAGATGAAACCAAAATaGAACAGCGGTCACTCGACCAGACCTGCACACACGGACCTTTAC | + |
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Preference number: 1 (lower is better) Translates to: GVQPHLVIQAQMKPK*NSGHSTRPAHTDLY Trigger: GTAAAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGACGAGGTGAGGCTGGACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 90 bp | GCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGGTaGAGCATCACTCTGTCCACTCCCAGAGTTCATCTCCATGTACTG | + |
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Preference number: 1 (lower is better) Translates to: AFRHIEHIERVSGAW*SITLSTPRVHLHVL Trigger: CAGTACATGGAGATGAACTCTGGGAGTGGACAGAGTGATGCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 90 bp | GAGAGAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTaGTTGGTGCAGCATCACTCTGTCCACTCCCAGAGTTCATCTCCA | + |
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Preference number: 1 (lower is better) Translates to: ERSLQTHRAHRKGQR*LVQHHSVHSQSSSP Trigger: TGGAGATGAACTCTGGGAGTGGACAGAGTGATGCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTCTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 90 bp | CTGACAGTGAGTATCCATGGGCTGCCACAGCAGCTCTGGGGCCAGTaGAGACAACACCTTCCTCATCGCTGTCTTAAAGCCTTCATGATA | + |
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Preference number: 1 (lower is better) Translates to: LTVSIHGLPQQLWGQ*RQHLPHRCLKAFMI Trigger: TATCATGAAGGCTTTAAGACAGCGATGAGGAAGGTGTTGTCTTCACTGGCCCCAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 90 bp | GAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTaGTGCAGCATCACTCTGTCCACTCCCAGAGTTCATCTCCATGTA | + |
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Preference number: 1 (lower is better) Translates to: EAFRHIEHIERVSGA*CSITLSTPRVHLHV Trigger: TACATGGAGATGAACTCTGGGAGTGGACAGAGTGATGCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 90 bp | GGCTCTAACATACAAGTCTGCTCCAGGGCTTCTGGTCTACTGGTCTaGAGGTTAGCCAGAGCACTACAGAGTTCAGCTTCATTTCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: GSNIQVCSRASGLLV*RLARALQSSASFPR Trigger: TCTAGGAAATGAAGCTGAACTCTGTAGTGCTCTGGCTAACCTTCAGACCAGTAGACCAGAAGCCCTGGAGCAGACTTGTATGTTAGAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 90 bp | TTAATAAAAGGTGCTATGTTTAGCCCAAGAGTATGTTCTGTCCCTTaGACCGCACTCTCTTCTACCAGCGTCTGGGACTCCACAAGCATC | + |
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Preference number: 1 (lower is better) Translates to: LIKGAMFSPRVCSVP*TALSSTSVWDSTSI Trigger: GATGCTTGTGGAGTCCCAGACGCTGGTAGAAGAGAGTGCGGTTCAAGGGACAGAACATACTCTTGGGCTAAACATAGCACCTTTTATTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 90 bp | TCCTCTATATGTCGCAGCCAAAACTCAAGTGTTTCCTTAGGGAAGTaGTTGGCTTCAGCTATGAGGTCCAAAGCGATACAATGCTGGTCT | + |
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Preference number: 1 (lower is better) Translates to: SSICRSQNSSVSLGK*LASAMRSKAIQCWS Trigger: AGACCAGCATTGTATCGCTTTGGACCTCATAGCTGAAGCCAACCACTTCCCTAAGGAAACACTTGAGTTTTGGCTGCGACATATAGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 90 bp | CGGTCACTCGACCAGACCTGCACACACGGACCTTTACTTCTTTATTaGAAGTGTTCAAATATGGAGTCATCAGATCCAACCTCAACAGCT | + |
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Preference number: 1 (lower is better) Translates to: RSLDQTCTHGPLLLY*KCSNMESSDPTSTA Trigger: AGCTGTTGAGGTTGGATCTGATGACTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 90 bp | ACTCCACAAGCATCCCAAACATCAGCACATACTGTGGGAAGATCTTaGCTCCAGACTGCAATAAACATCTGGATATTGCAGCCTTTTCCA | + |
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Preference number: 1 (lower is better) Translates to: TPQASQTSAHTVGRS*LQTAINIWILQPFP Trigger: TGGAAAAGGCTGCAATATCCAGATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGGGATGCTTGTGGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 90 bp | GCCAGTGAAGACAACACCTTCCTCATCGCTGTCTTAAAGCCTTCATaGTACGGAATGTTATTAAGCAAAGCAATCTCTGTGGGCTCTAAC | + |
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Preference number: 1 (lower is better) Translates to: ASEDNTFLIAVLKPS*YGMLLSKAISVGSN Trigger: GTTAGAGCCCACAGAGATTGCTTTGCTTAATAACATTCCGTATCATGAAGGCTTTAAGACAGCGATGAGGAAGGTGTTGTCTTCACTGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 90 bp | GACTGCAATAAACATCTGGATATTGCAGCCTTTTCCATCAGCTCCTaGTGGATAAGCCCAGATGGCTCAATGACATCTAGTATAATTATG | + |
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Preference number: 1 (lower is better) Translates to: DCNKHLDIAAFSISS*WISPDGSMTSSIIM Trigger: CATAATTATACTAGATGTCATTGAGCCATCTGGGCTTATCCAGCAGGAGCTGATGGAAAAGGCTGCAATATCCAGATGTTTATTGCAGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 90 bp | GTTTCCTCACTAGGACTTGTGGACAAGCTGTATTCATCATCAAGCTaGAGAACAAACCAAACCATAATAGCATCTAGCACGCCTTCTTTA | + |
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Preference number: 1 (lower is better) Translates to: VSSLGLVDKLYSSSS*RTNQTIIASSTPSL Trigger: TAAAGAAGGCGTGCTAGATGCTATTATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATACAGCTTGTCCACAAGTCCTAGTGAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 90 bp | TGCAATAAACATCTGGATATTGCAGCCTTTTCCATCAGCTCCTGCTaGATAAGCCCAGATGGCTCAATGACATCTAGTATAATTATGCTC | + |
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Preference number: 1 (lower is better) Translates to: CNKHLDIAAFSISSC*ISPDGSMTSSIIML Trigger: GAGCATAATTATACTAGATGTCATTGAGCCATCTGGGCTTATCCAGCAGGAGCTGATGGAAAAGGCTGCAATATCCAGATGTTTATTGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 90 bp | ACACATGGCAAAGAAGATAAATCCAGACATACCCGGATAGGCACCTaGAACTGGTTAATAAAAGGTGCTATGTTTAGCCCAAGAGTATGT | + |
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Preference number: 1 (lower is better) Translates to: THGKEDKSRHTRIGT*NWLIKGAMFSPRVC Trigger: ACATACTCTTGGGCTAAACATAGCACCTTTTATTAACCAGTTTCAGGTGCCTATCCGGGTATGTCTGGATTTATCTTCTTTGCCATGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR TCA 90 bp | ACTGCAGCTTGTTTCCAGTGGGAGGCTTCACCTGAGGTGTCCAGCCTCACCTCGTCTGGTCTACTGGTCTaGAGGTTAGCCAGAGCACTA | + |
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Preference number: 2 (lower is better) Translates to: TAACFQWEASPEVSSLTSSGLLV*RLARAL Trigger: TAGTGCTCTGGCTAACCTTCAGACCAGTAGACCAGA...CGAGGTGAGGCTGGACACCTCAGGTGAAGCCTCCCACTGGAAACAAGCTGCAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR GCA 90 bp | CCATGTACTGACAGTGAGTATCCATGGGCTGCCACAGCAGCTCTGGGGCCAGTGGGTATCCTCCGGGGATaGCACTCATCTTTTCAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PCTDSEYPWAATAALGPVGILRG*HSSFQL Trigger: CAACTGAAAAGATGAGTGGCATCCCCGGAGGATACC...CACTGGCCCCAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTCAGTACATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | AGAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTaGGTGCAGCATCACTCTGTCCACTCCCAGAGTTCATCTCCATGT | + |
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Preference number: 2 (lower is better) Translates to: RSLQTHRAHRKGQRC*VQHHSVHSQSSSPC Trigger: ACATGGAGATGAACTCTGGGAGTGGACAGAGTGATGCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR GCA 90 bp | CACCTCGTCATCCAGGCACAGATGAAACCAAAATGGAACAGCGGTCACTCGACCTTTTCCATCAGCTCCTaGTGGATAAGCCCAGATGGC | + |
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Preference number: 2 (lower is better) Translates to: HLVIQAQMKPKWNSGHSTFSISS*WISPDG Trigger: GCCATCTGGGCTTATCCAGCAGGAGCTGATGGAAAA...GGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGACGAGGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGCAGCTTGTTTCCAGTGGGAGGCTTCACCTGAGGTGTCCAGCCTCACCTCGACAATTTGTCTGATTTaGGCCTTTGCAACACAGCAG | + |
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Preference number: 2 (lower is better) Translates to: TAACFQWEASPEVSSLTSTICLI*AFATQQ Trigger: CTGCTGTGTTGCAAAGGCCCAAATCAGACAAATTGT...CGAGGTGAGGCTGGACACCTCAGGTGAAGCCTCCCACTGGAAACAAGCTGCAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACCAAAATGGAACAGCGGTCACTCGACCAGACCTGCACACACGGACCTTTCCATCAGCTCCTGCTaGATAAGCCCAGATGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: MKPKWNSGHSTRPAHTDLSISSC*ISPDGS Trigger: TGAGCCATCTGGGCTTATCCAGCAGGAGCTGATGGA...AAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAGCTCCTCTCCCGCTTGTACTTGGATGGGATTATCCAGAACAACTGCACTGCTCCAGGGCTTCTaGTCTACTGGTCTGAAGGTT | + |
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Preference number: 2 (lower is better) Translates to: STSSSPACTWMGLSRTTALLQGF*STGLKV Trigger: AACCTTCAGACCAGTAGACCAGAAGCCCTGGAGCAG...TGCAGTTGTTCTGGATAATCCCATCCAAGTACAAGCGGGAGAGGAGCTTGTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAAACCAAAATGGAACAGCGGTCACTCGACCAGACCTGCACACACGGACCTTAACAGCTCCACTGGTTaGCTTAAAGGGACACATGGC | + |
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Preference number: 2 (lower is better) Translates to: MKPKWNSGHSTRPAHTDLNSSTG*LKGTHG Trigger: GCCATGTGTCCCTTTAAGCCAACCAGTGGAGCTGTT...AAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | TTTGTGATGCTCAACGCTGAGCACAAGCTCCTCTCCCGCTTGTACTaGGATGGGATTATCCAGAACAACTGCAGCTTGTTTCCAGTGGGA | + |
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Preference number: 2 (lower is better) Translates to: FVMLNAEHKLLSRLY*DGIIQNNCSLFPVG Trigger: TCCCACTGGAAACAAGCTGCAGTTGTTCTGGATAATCCCATCCAAGTACAAGCGGGAGAGGAGCTTGTGCTCAGCGTTGAGCATCACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | ATGACCAAGTGTTCCGGCAAGTATAGGCAAAAGAGAGAAGCCTTCAGACACATCGACAGTGAGTATCCATaGGCTGCCACAGCAGCTCTG | + |
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Preference number: 2 (lower is better) Translates to: MTKCSGKYRQKREAFRHIDSEYP*AATAAL Trigger: CAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTC...GATGTGTCTGAAGGCTTCTCTCTTTTGCCTATACTTGCCGGAACACTTGGTCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | GTTGCTTTTGTGATGCTCAACGCTGAGCACAAGCTCCTCTCCCGCTaGTACTTGGATGGGATTATCCAGAACAACTGCAGCTTGTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: VAFVMLNAEHKLLSR*YLDGIIQNNCSLFP Trigger: TGGAAACAAGCTGCAGTTGTTCTGGATAATCCCATCCAAGTACAAGCGGGAGAGGAGCTTGTGCTCAGCGTTGAGCATCACAAAAGCAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | GCGGTCACTCGACCAGACCTGCACACACGGACCTTTACTTCTTTATaGGAAGTGTTCAAATATGGAGTCATCAGATCCAACCTCAACAGC | + |
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Preference number: 2 (lower is better) Translates to: AVTRPDLHTRTFTSL*EVFKYGVIRSNLNS Trigger: GCTGTTGAGGTTGGATCTGATGACTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | CCGTCAAAGGCAGGTATCCTCCGGGGATGCCACTCATCTTTTCAGTaGTGTAGGGTTCAACTGTTTCTTCTGTATCAACAGAAGTATAGG | + |
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Preference number: 2 (lower is better) Translates to: PSKAGILRGCHSSFQ*CRVQLFLLYQQKYR Trigger: CCTATACTTCTGTTGATACAGAAGAAACAGTTGAACCCTACACAACTGAAAAGATGAGTGGCATCCCCGGAGGATACCTGCCTTTGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | GACTCCACAAGCATCCCAAACATCAGCACATACTGTGGGAAGATCTaGCCTCCAGACTGCAATAAACATCTGGATATTGCAGCCTTTTCC | + |
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Preference number: 2 (lower is better) Translates to: DSTSIPNISTYCGKI*PPDCNKHLDIAAFS Trigger: GGAAAAGGCTGCAATATCCAGATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGGGATGCTTGTGGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | TCTATATGTCGCAGCCAAAACTCAAGTGTTTCCTTAGGGAAGTGGTaGGCTTCAGCTATGAGGTCCAAAGCGATACAATGCTGGTCTTTC | + |
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Preference number: 2 (lower is better) Translates to: SICRSQNSSVSLGKW*ASAMRSKAIQCWSF Trigger: GAAAGACCAGCATTGTATCGCTTTGGACCTCATAGCTGAAGCCAACCACTTCCCTAAGGAAACACTTGAGTTTTGGCTGCGACATATAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR TCA 90 bp | ATGAAACCAAAATGGAACAGCGGTCACTCGACCAGACCTGCACACACGGACCTTGTCTTAAAGCCTTCATaGTACGGAATGTTATTAAGC | + |
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Preference number: 2 (lower is better) Translates to: MKPKWNSGHSTRPAHTDLVLKPS*YGMLLS Trigger: GCTTAATAACATTCCGTATCATGAAGGCTTTAAGAC...AAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR GCA 90 bp | AAAGAGAGAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGATTTCATGTTCCAAATaGAAGATACTGATCCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: KERSLQTHRAHRKGQRCLISCSK*KILIPW Trigger: CCAGGGGATCAGTATCTTGCATTTGGAACATGAAAT...CAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTCTCTCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR GCA 90 bp | ATGAAACCAAAATGGAACAGCGGTCACTCGACCAGACCTGCACACACGGACCTTATCTTGCCTCCAGACTaGAATAAACATCTGGATATT | + |
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Preference number: 2 (lower is better) Translates to: MKPKWNSGHSTRPAHTDLILPPD*NKHLDI Trigger: AATATCCAGATGTTTATTGCAGTCTGGAGGCAAGAT...AAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCACACACGGACCTTTACTTCTTTATTGGAAGTGTTCAAATATGGAGTCATCTCTTCTACCAGCGTCTaGGACTCCACAAGCATCCCA | + |
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Preference number: 2 (lower is better) Translates to: LHTRTFTSLLEVFKYGVISSTSV*DSTSIP Trigger: TGGGATGCTTGTGGAGTCCCAGACGCTGGTAGAAGA...GATGACTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCTTCTACCAGCGTCTGGGACTCCACAAGCATCCCAAACATCAGCACATACTAACATTAAGAGAGTGTaGCTTCTTAGTTGCAAGACT | + |
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Preference number: 2 (lower is better) Translates to: SLLPASGTPQASQTSAHTNIKRV*LLSCKT Trigger: AGTCTTGCAACTAAGAAGCCACACTCTCTTAATGTT...AGTATGTGCTGATGTTTGGGATGCTTGTGGAGTCCCAGACGCTGGTAGAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CCA 90 bp | CCAAACATCAGCACATACTGTGGGAAGATCTTGCCTCCAGACTGCAATAAACATTATTCATCATCAAGCTaGAGAACAAACCAAACCATA | + |
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Preference number: 2 (lower is better) Translates to: PNISTYCGKILPPDCNKHYSSSS*RTNQTI Trigger: TATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATA...ATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CAA 90 bp | CTACAGAGTTCAGCTTCATTTCCTAGAGAAAGCAAGTCTTTACTCTaGGTAAAACCTTTCATAACTTCCATTTCATGTTCCAAATGCAAG | + |
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Preference number: 2 (lower is better) Translates to: LQSSASFPRESKSLL*VKPFITSISCSKCK Trigger: CTTGCATTTGGAACATGAAATGGAAGTTATGAAAGGTTTTACCAAGAGTAAAGACTTGCTTTCTCTAGGAAATGAAGCTGAACTCTGTAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 72 bp | TCTCACGGCTTCACTGCGATGCTGACGTTGCTTTTGTaGTGCTCAACGCTGAGCACAAGCTCCTCTCCCGCT | + |
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Preference number: 3 (lower is better) Translates to: SHGFTAMLTLLL*CSTLSTSSSPA Trigger: AGCGGGAGAGGAGCTTGTGCTCAGCGTTGAGCATCACAAAAGCAACGTCAGCATCGCAGTGAAGCCGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 72 bp | CCTCACCTCGTCATCCAGGCACAGATGAAACCAAAATaGAACAGCGGTCACTCGACCAGACCTGCACACACG | + |
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Preference number: 3 (lower is better) Translates to: PHLVIQAQMKPK*NSGHSTRPAHT Trigger: CGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGACGAGGTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 72 bp | CACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGGTaGAGCATCACTCTGTCCACTCCCAGAGTTCATCTC | + |
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Preference number: 3 (lower is better) Translates to: HIEHIERVSGAW*SITLSTPRVHL Trigger: GAGATGAACTCTGGGAGTGGACAGAGTGATGCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 72 bp | CAGAGTTCATCTCCATGTACTGACAGTGAGTATCCATaGGCTGCCACAGCAGCTCTGGGGCCAGTGAAGACA | + |
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Preference number: 3 (lower is better) Translates to: QSSSPCTDSEYP*AATAALGPVKT Trigger: TGTCTTCACTGGCCCCAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTCAGTACATGGAGATGAACTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 72 bp | ATGGGATTATCCAGAACAACTGCAGCTTGTTTCCAGTaGGAGGCTTCACCTGAGGTGTCCAGCCTCACCTCG | + |
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Preference number: 3 (lower is better) Translates to: MGLSRTTAACFQ*EASPEVSSLTS Trigger: CGAGGTGAGGCTGGACACCTCAGGTGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTCTGGATAATCCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR-3UTR CAA 90 bp | CACCTCGTCATCCAGGCACAGATGAAACCAAAATGGAACAGCGGTCACTCGACCAGTATGTTCTGTCCCTaGAACCGCACTCTCTTCTAC | + |
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Preference number: 3 (lower is better) Translates to: HLVIQAQMKPKWNSGHSTSMFCP*NRTLFY Trigger: GTAGAAGAGAGTGCGGTTCAAGGGACAGAACATACT...GGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGACGAGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 72 bp | GAAAGCACTCCGTCAAAGGCAGGTATCCTCCGGGGATaGCACTCATCTTTTCAGTTGTGTAGGGTTCAACTG | + |
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Preference number: 3 (lower is better) Translates to: ESTPSKAGILRG*HSSFQLCRVQL Trigger: CAGTTGAACCCTACACAACTGAAAAGATGAGTGGCATCCCCGGAGGATACCTGCCTTTGACGGAGTGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 72 bp | ATACAAGTCTGCTCCAGGGCTTCTGGTCTACTGGTCTaGAGGTTAGCCAGAGCACTACAGAGTTCAGCTTCA | + |
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Preference number: 3 (lower is better) Translates to: IQVCSRASGLLV*RLARALQSSAS Trigger: TGAAGCTGAACTCTGTAGTGCTCTGGCTAACCTTCAGACCAGTAGACCAGAAGCCCTGGAGCAGACTTGTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR GCA 72 bp | AAGATGCCTCCATTGTCACTCGGTCACCAGGCTGTATaGAGTAGTCTTCAAGGGCCTGTACTGGATAAACAG | + |
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Preference number: 3 (lower is better) Translates to: KMPPLSLGHQAV*SSLQGPVLDKQ Trigger: CTGTTTATCCAGTACAGGCCCTTGAAGACTACTGCATACAGCCTGGTGACCGAGTGACAATGGAGGCATCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR CCA 72 bp | ACCAGGCTGTATGCAGTAGTCTTCAAGGGCCTGTACTaGATAAACAGCCTGTTCCCAACAGGTTTCCTCACT | + |
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Preference number: 3 (lower is better) Translates to: TRLYAVVFKGLY*INSLFPTGFLT Trigger: AGTGAGGAAACCTGTTGGGAACAGGCTGTTTATCCAGTACAGGCCCTTGAAGACTACTGCATACAGCCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| 3UTR TCA 72 bp | GATGACTCCAGGGATTTTCACACATTCATTGTTCGATaGCAATCTCACGGCTTCACTGCGATGCTGACGTTG | + |
|
Preference number: 3 (lower is better) Translates to: DDSRDFHTFIVR*QSHGFTAMLTL Trigger: CAACGTCAGCATCGCAGTGAAGCCGTGAGATTGTCATCGAACAATGAATGTGTGAAAATCCCTGGAGTCATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR GCA 72 bp | GAAACCAAAATGGAACAGCGGTCACTCGACCAGACCTaGACACACGGACCTTTACTTCTTTATTGGAAGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ETKMEQRSLDQT*THGPLLLYWKC Trigger: ACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAGGTCTGGTCGAGTGACCGCTGTTCCATTTTGGTTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR GCA 72 bp | CACATTCATTGTTCGATGACAATCTCACGGCTTCACTaGGATGCTGACGTTGCTTTTGTGATGCTCAACGCT | + |
|
Preference number: 3 (lower is better) Translates to: HIHCSMTISRLH*DADVAFVMLNA Trigger: AGCGTTGAGCATCACAAAAGCAACGTCAGCATCGCAGTGAAGCCGTGAGATTGTCATCGAACAATGAATGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CCA 72 bp | TGTCGCAGCCAAAACTCAAGTGTTTCCTTAGGGAAGTaGTTGGCTTCAGCTATGAGGTCCAAAGCGATACAA | + |
|
Preference number: 3 (lower is better) Translates to: CRSQNSSVSLGK*LASAMRSKAIQ Trigger: TTGTATCGCTTTGGACCTCATAGCTGAAGCCAACCACTTCCCTAAGGAAACACTTGAGTTTTGGCTGCGACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CCA 72 bp | GGAGTCATCAGATCCAACCTCAACAGCTCCACTGGTTaGCTTAAAGGGACACATGGCAAAGAAGATAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: GVIRSNLNSSTG*LKGTHGKEDKS Trigger: GGATTTATCTTCTTTGCCATGTGTCCCTTTAAGCCAACCAGTGGAGCTGTTGAGGTTGGATCTGATGACTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR GCA 72 bp | GCATCCCAAACATCAGCACATACTGTGGGAAGATCTTaGCTCCAGACTGCAATAAACATCTGGATATTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: ASQTSAHTVGRS*LQTAINIWILQ Trigger: CTGCAATATCCAGATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGGGATGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR GCA 72 bp | ATCAGCACATACTGTGGGAAGATCTTGCCTCCAGACTaGAATAAACATCTGGATATTGCAGCCTTTTCCATC | + |
|
Preference number: 3 (lower is better) Translates to: ISTYCGKILPPD*NKHLDIAAFSI Trigger: GATGGAAAAGGCTGCAATATCCAGATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CCA 72 bp | CTAGGACTTGTGGACAAGCTGTATTCATCATCAAGCTaGAGAACAAACCAAACCATAATAGCATCTAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: LGLVDKLYSSSS*RTNQTIIASST Trigger: CGTGCTAGATGCTATTATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATACAGCTTGTCCACAAGTCCTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR TCA 72 bp | GACAACACCTTCCTCATCGCTGTCTTAAAGCCTTCATaGTACGGAATGTTATTAAGCAAAGCAATCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: DNTFLIAVLKPS*YGMLLSKAISV Trigger: CACAGAGATTGCTTTGCTTAATAACATTCCGTATCATGAAGGCTTTAAGACAGCGATGAGGAAGGTGTTGTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR TCA 72 bp | AAAGAAGATAAATCCAGACATACCCGGATAGGCACCTaGAACTGGTTAATAAAAGGTGCTATGTTTAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: KEDKSRHTRIGT*NWLIKGAMFSP Trigger: TGGGCTAAACATAGCACCTTTTATTAACCAGTTTCAGGTGCCTATCCGGGTATGTCTGGATTTATCTTCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCTGTATGCAGTAGTCTTCAAGGGCCTGTACTGGATAAACAGCCTGTTCGCTCTGGCGCCAGGCTaGGCACCAGAAGGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: TRLYAVVFKGLYWINSLFALAPG*APEGNG Trigger: CCCATTACCTTCTGGTGCTCAGCCTGGCGCCAGAGC...GAACAGGCTGTTTATCCAGTACAGGCCCTTGAAGACTACTGCATACAGCCTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TCACTAGGACTTGTGGACAAGCTGTATTCATCATCAAGCTGGAGAACAAACCAAACTCTGCAAGGACCGTaGCACCAGCCGGTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLGLVDKLYSSSSWRTNQTLQGP*HQPVPA Trigger: GGCCGGGACCGGCTGGTGGCACGGTCCTTGCAGAGT...TTGGTTTGTTCTCCAGCTTGATGATGAATACAGCTTGTCCACAAGTCCTAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CACCTCGTCATCCAGGCACAGATGAAACCAAAATGGAACAGCGGTCACTCGACCTTAAGCATGATGAAGTaGCAGCGCTCCACCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: HLVIQAQMKPKWNSGHSTLSMMK*QRSTSQ Trigger: CTGGCTGGTGGAGCGCTGGCACTTCATCATGCTTAA...GGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGACGAGGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CAA 72 bp | GTGATGCTCAACGCTGAGCACAAGCTCCTCTCCCGCTaGTACTTGGATGGGATTATCCAGAACAACTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VMLNAEHKLLSR*YLDGIIQNNCS Trigger: GCTGCAGTTGTTCTGGATAATCCCATCCAAGTACAAGCGGGAGAGGAGCTTGTGCTCAGCGTTGAGCATCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | ACCAGGCTGTATGCAGTAGTCTTCAAGGGCCTGTACTGGATAAACAGCCTGTTCGCAGTGCCGAAGTCCTaGTCACCTAGACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLYAVVFKGLYWINSLFAVPKS*SPRQCS Trigger: TGAGCACTGTCTAGGTGACCAGGACTTCGGCACTGC...GAACAGGCTGTTTATCCAGTACAGGCCCTTGAAGACTACTGCATACAGCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTACTCTGCAAGGACCGTaGCACCAGCCGGTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVTLQGP*HQPVPA Trigger: GGCCGGGACCGGCTGGTGGCACGGTCCTTGCAGAGT...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTACTCTGCAAGGACCGTaGCACCAGCCGGTCCCGGCC | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFTLQGP*HQPVPA Trigger: GGCCGGGACCGGCTGGTGGCACGGTCCTTGCAGAGT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | CCATGTACTGACAGTGAGTATCCATGGGCTGCCACAGCAGCTCTGGGGCCAGTGGTTCATACATGGTCTTaGATAATTCACAGGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: PCTDSEYPWAATAALGPVVHTWS*IIHRHI Trigger: TATATGCCTGTGAATTATCCAAGACCATGTATGAAC...CACTGGCCCCAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTCAGTACATGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CAA 72 bp | CGCAGCCAAAACTCAAGTGTTTCCTTAGGGAAGTGGTaGGCTTCAGCTATGAGGTCCAAAGCGATACAATGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQNSSVSLGKW*ASAMRSKAIQC Trigger: GCATTGTATCGCTTTGGACCTCATAGCTGAAGCCAACCACTTCCCTAAGGAAACACTTGAGTTTTGGCTGCG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | AAGAGAGAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGGTATAACAGCACCGGCTaGTATCACTTTCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KREAFRHIEHIERVSGAWYNSTG*YHFPIL Trigger: AAGTATGGGAAAGTGATACCAGCCGGTGCTGTTATA...CCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTCTCTCTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAGCTCTGGCGCCAGGCTaGGCACCAGAAGGTAATGGG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTALAPG*APEGNG Trigger: CCCATTACCTTCTGGTGCTCAGCCTGGCGCCAGAGC...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CTGCACACACGGACCTTTACTTCTTTATTGGAAGTGTTCAAATATGGAGTCATCGGAGCCCAGGCACACTaGCTTCTGGATTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LHTRTFTSLLEVFKYGVIGAQAH*LLDCCI Trigger: AATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCC...GATGACTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | ACAAGCTCCTCTCCCGCTTGTACTTGGATGGGATTATCCAGAACAACTGCAGCTAGGCGAGTTCATACATaGTCTTGGATAATTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: TSSSPACTWMGLSRTTAARRVHT*SWIIHR Trigger: CCTGTGAATTATCCAAGACCATGTATGAACTCGCCT...AGCTGCAGTTGTTCTGGATAATCCCATCCAAGTACAAGCGGGAGAGGAGCTTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CAA 72 bp | GCAGGTATCCTCCGGGGATGCCACTCATCTTTTCAGTaGTGTAGGGTTCAACTGTTTCTTCTGTATCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: AGILRGCHSSFQ*CRVQLFLLYQQ Trigger: CTGTTGATACAGAAGAAACAGTTGAACCCTACACAACTGAAAAGATGAGTGGCATCCCCGGAGGATACCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CAA 72 bp | GGATTCTTAGGTAACAATCGTGACAAGATGCCTCCATaGTCACTCGGTCACCAGGCTGTATGCAGTAGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GFLGNNRDKMPP*SLGHQAVCSSL Trigger: AAGACTACTGCATACAGCCTGGTGACCGAGTGACAATGGAGGCATCTTGTCACGATTGTTACCTAAGAATCC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | CTCTTCTACCAGCGTCTGGGACTCCACAAGCATCCCAAACATCAGCACATACTGTTGAAAAGTGTATACTaGAAAGTTTCCTTCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LFYQRLGLHKHPKHQHILLKSVY*KVSFTS Trigger: CGACGTGAAGGAAACTTTTCAGTATACACTTTTCAA...CAGTATGTGCTGATGTTTGGGATGCTTGTGGAGTCCCAGACGCTGGTAGAAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TCACTAGGACTTGTGGACAAGCTGTATTCATCATCAAGCTGGAGAACAAACCAAAATGGGCATAAGCAGTaGCGAAGTCCTGGTCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: SLGLVDKLYSSSSWRTNQNGHKQ*RSPGHL Trigger: TAGGTGACCAGGACTTCGGCACTGCTTATGCCCATT...TTGGTTTGTTCTCCAGCTTGATGATGAATACAGCTTGTCCACAAGTCCTAGTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CCAAACATCAGCACATACTGTGGGAAGATCTTGCCTCCAGACTGCAATAAACATCTCTGCACACTCGACTaGCATCCCAAATATAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PNISTYCGKILPPDCNKHLCTLD*HPKYNS Trigger: GCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAG...ATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | ATGACCAAGTGTTCCGGCAAGTATAGGCAAAAGAGAGAAGCCTTCAGACACATCGCTCTTCAGCCCACTTaGAAAGTGTATACTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: MTKCSGKYRQKREAFRHIALQPT*KVYTEK Trigger: CTTTTCAGTATACACTTTTCAAGTGGGCTGAAGAGC...GATGTGTCTGAAGGCTTCTCTCTTTTGCCTATACTTGCCGGAACACTTGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTGTGATGCTCAACGCTaGGCACAAGCTCCTCTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDCDAQR*AQAPLP Trigger: CGGGAGAGGAGCTTGTGCTCAGCGTTGAGCATCACA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACGGAGCCCAGGCACACTaGCTTCTGGATTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHGAQAH*LLDCCI Trigger: AATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCC...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACTATCCAGAACGGTTCTaGAGCCCAGGCACACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHYPERF*SPGTLP Trigger: AGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGATA...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAGCAGCTTGTTTCCAGTaGGAGGCTTCACCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRAACFQ*EASPEV Trigger: CACCTCAGGTGAAGCCTCCCACTGGAAACAAGCTGC...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| 3UTR CAA 72 bp | AGCATCCCAAACATCAGCACATACTGTGGGAAGATCTaGCCTCCAGACTGCAATAAACATCTGGATATTGCA | + |
|
Preference number: 4 (lower is better) Translates to: SIPNISTYCGKI*PPDCNKHLDIA Trigger: TGCAATATCCAGATGTTTATTGCAGTCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATGTTTGGGATGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| 3UTR CAA 72 bp | CGACCAGACCTGCACACACGGACCTTTACTTCTTTATaGGAAGTGTTCAAATATGGAGTCATCAGATCCAAC | + |
|
Preference number: 4 (lower is better) Translates to: RPDLHTRTFTSL*EVFKYGVIRSN Trigger: GTTGGATCTGATGACTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAGGTCTGGTCG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATCAGCTCTGGGGCCAGTaGAGACAACACCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDQLWGQ*RQHLPH Trigger: ATGAGGAAGGTGTTGTCTTCACTGGCCCCAGAGCTG...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCAGCTCTGGGGCCAGTaGAGACAACACCTTCCTCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVQLWGQ*RQHLPH Trigger: ATGAGGAAGGTGTTGTCTTCACTGGCCCCAGAGCTG...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATGGAGCCCAGGCACACTaGCTTCTGGATTGCTGCATT | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDGAQAH*LLDCCI Trigger: AATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCC...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACATGCCTTCGTATCTCTaGACACTCGACTGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHMPSYL*TLDCHP Trigger: GGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCAT...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAGGTCACCAGGCTGTATaGAGTAGTCTTCAAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRGHQAV*SSLQGP Trigger: AGGCCCTTGAAGACTACTGCATACAGCCTGGTGACC...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACGGTCACCAGGCTGTATaGAGTAGTCTTCAAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHGHQAV*SSLQGP Trigger: AGGCCCTTGAAGACTACTGCATACAGCCTGGTGACC...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTGCAGTGCCGAAGTCCTaGTCACCTAGACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVAVPKS*SPRQCS Trigger: TGAGCACTGTCTAGGTGACCAGGACTTCGGCACTGC...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTGCAGTGCCGAAGTCCTaGTCACCTAGACAGTGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFAVPKS*SPRQCS Trigger: TGAGCACTGTCTAGGTGACCAGGACTTCGGCACTGC...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATATCCAGAACGGTTCTaGAGCCCAGGCACACTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTYPERF*SPGTLP Trigger: AGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGATA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACCTGCTCCAGGGCTTCTaGTCTACTGGTCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHLLQGF*STGLKV Trigger: AACCTTCAGACCAGTAGACCAGAAGCCCTGGAGCAG...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGACAGTGAGTATCCATaGGCTGCCACAGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRDSEYP*AATAAL Trigger: CAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATGACAGTGAGTATCCATaGGCTGCCACAGCAGCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDDSEYP*AATAAL Trigger: CAGAGCTGCTGTGGCAGCCCATGGATACTCACTGTC...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGCAGCTTGTTTCCAGTaGGAGGCTTCACCTGAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRAACFQ*EASPEV Trigger: CACCTCAGGTGAAGCCTCCCACTGGAAACAAGCTGC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| 3UTR CAA 72 bp | ACATTTTTGATGACTCCAGGGATTTTCACACATTCATaGTTCGATGACAATCTCACGGCTTCACTGCGATGC | + |
|
Preference number: 4 (lower is better) Translates to: TFLMTPGIFTHS*FDDNLTASLRC Trigger: GCATCGCAGTGAAGCCGTGAGATTGTCATCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATCTGGTCTACTGGTCTaGAGGTTAGCCAGAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRSGLLV*RLARAL Trigger: TAGTGCTCTGGCTAACCTTCAGACCAGTAGACCAGA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGACTGACGTTGCTTTTGTaGTGCTCAACGCTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRLTLLL*CSTLST Trigger: TGTGCTCAGCGTTGAGCATCACAAAAGCAACGTCAG...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAAATGGGCATAAGCAGTaGCGAAGTCCTGGTCACCTA | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRNGHKQ*RSPGHL Trigger: TAGGTGACCAGGACTTCGGCACTGCTTATGCCCATT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTAAGCATGATGAAGTaGCAGCGCTCCACCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDLSMMK*QRSTSQ Trigger: CTGGCTGGTGGAGCGCTGGCACTTCATCATGCTTAA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTAAGCATGATGAAGTaGCAGCGCTCCACCAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTLSMMK*QRSTSQ Trigger: CTGGCTGGTGGAGCGCTGGCACTTCATCATGCTTAA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGATGCCTTCGTATCTCTaGACACTCGACTGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRMPSYL*TLDCHP Trigger: GGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCAT...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CCTAGAGAAAGCAAGTCTTTACTCTTGGTAAAACCTTTCATAACTTCCATTTCAATGCCTTCGTATCTCTaGACACTCGACTGCCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRESKSLLLVKPFITSISMPSYL*TLDCHP Trigger: GGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCAT...TGAAATGGAAGTTATGAAAGGTTTTACCAAGAGTAAAGACTTGCTTTCTCTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAGGTATCCTCCGGGGATaGCACTCATCTTTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRGILRG*HSSFQL Trigger: CAACTGAAAAGATGAGTGGCATCCCCGGAGGATACC...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATTTTCCATCAGCTCCTaGTGGATAAGCCCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRFSISS*WISPDG Trigger: GCCATCTGGGCTTATCCAGCAGGAGCTGATGGAAAA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACACTGCTCCAGGGCTTCTaGTCTACTGGTCTGAAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTLLQGF*STGLKV Trigger: AACCTTCAGACCAGTAGACCAGAAGCCCTGGAGCAG...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTCCATCAGCTCCTGCTaGATAAGCCCAGATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDSISSC*ISPDGS Trigger: TGAGCCATCTGGGCTTATCCAGCAGGAGCTGATGGA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATCCATCAGCTCCTGCTaGATAAGCCCAGATGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTSISSC*ISPDGS Trigger: TGAGCCATCTGGGCTTATCCAGCAGGAGCTGATGGA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATCTTCTACCAGCGTCTaGGACTCCACAAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTSSTSV*DSTSIP Trigger: TGGGATGCTTGTGGAGTCCCAGACGCTGGTAGAAGA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTCTTCTACCAGCGTCTaGGACTCCACAAGCATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDSSTSV*DSTSIP Trigger: TGGGATGCTTGTGGAGTCCCAGACGCTGGTAGAAGA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | CAGACCTGCACACACGGACCTTTACTTCTTTATTGGAAGTGTTCAAATATGGAGTCTCCTTTGCATCATTaGAATCAGGGTTTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTCTHGPLLLYWKCSNMESPLHH*NQGLAS Trigger: TGAAGCTAAACCCTGATTTCAATGATGCAAAGGAGA...CTCCATATTTGAACACTTCCAATAAAGAAGTAAAGGTCCGTGTGTGCAGGTCTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTCTGGTCTACTGGTCTaGAGGTTAGCCAGAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVSGLLV*RLARAL Trigger: TAGTGCTCTGGCTAACCTTCAGACCAGTAGACCAGA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACACTGACGTTGCTTTTGTaGTGCTCAACGCTGAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTLTLLL*CSTLST Trigger: TGTGCTCAGCGTTGAGCATCACAAAAGCAACGTCAG...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGCTTCACTGCGATGCTaGCGTTGCTTTTGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRASLRC*RCFCDA Trigger: AGCATCACAAAAGCAACGTCAGCATCGCAGTGAAGC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTGCTTCACTGCGATGCTaGCGTTGCTTTTGTGATGCT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVASLRC*RCFCDA Trigger: AGCATCACAAAAGCAACGTCAGCATCGCAGTGAAGC...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGGTATCCTCCGGGGATaGCACTCATCTTTTCAGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRGILRG*HSSFQL Trigger: CAACTGAAAAGATGAGTGGCATCCCCGGAGGATACC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTTTTCCATCAGCTCCTaGTGGATAAGCCCAGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVFSISS*WISPDG Trigger: GCCATCTGGGCTTATCCAGCAGGAGCTGATGGAAAA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACCATCAGCACATACTGTaGGAAGATCTTGCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHHQHIL*EDLASR Trigger: TCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATG...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAAACAGCTCCACTGGTTaGCTTAAAGGGACACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTNSSTG*LKGTHG Trigger: GCCATGTGTCCCTTTAAGCCAACCAGTGGAGCTGTT...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTAACAGCTCCACTGGTTaGCTTAAAGGGACACATGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFNSSTG*LKGTHG Trigger: GCCATGTGTCCCTTTAAGCCAACCAGTGGAGCTGTT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGACAGATGAAACCAAAATaGAACAGCGGTCACTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRQMKPK*NSGHST Trigger: GGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTG...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTTCATCCAGGCACAGATaGAACCAAAATGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFSSRHR*NQNGTA Trigger: CGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGA...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTCATCCAGGCACAGATaGAACCAAAATGGAACAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVSSRHR*NQNGTA Trigger: CGCTGTTCCATTTTGGTTTCATCTGTGCCTGGATGA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TATTCATCATCAAGCTGGAGAACAAACCAAACCATAATAGCATCTAGCACGCCTCACTGCCTTCTGGATTaGTGCATTATAAACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSSSSWRTNQTIIASSTPHCLLD*CIINHV Trigger: AACATGGTTTATAATGCAGCAATCCAGAAGGCAGTG...AGGCGTGCTAGATGCTATTATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCTCTGCACACTCGACTaGCATCCCAAATATAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFLCTLD*HPKYNS Trigger: GCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAG...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATCATCAGCACATACTGTaGGAAGATCTTGCCTCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDHQHIL*EDLASR Trigger: TCTGGAGGCAAGATCTTCCCACAGTATGTGCTGATG...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGCAGATGAAACCAAAATaGAACAGCGGTCACTCGACC | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRQMKPK*NSGHST Trigger: GGTCGAGTGACCGCTGTTCCATTTTGGTTTCATCTG...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATACCCGGATAGGCACCTaGAACTGGTTAATAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDTRIGT*NWLIKG Trigger: ACCTTTTATTAACCAGTTTCAGGTGCCTATCCGGGT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTACCCGGATAGGCACCTaGAACTGGTTAATAAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFTRIGT*NWLIKG Trigger: ACCTTTTATTAACCAGTTTCAGGTGCCTATCCGGGT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACATTTTCCATCTTGTTTaGAGCCACTACATCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHIFHLV*SHYITG Trigger: GCCTGTGATGTAGTGGCTGCAAACAAGATGGAAAAT...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAGCAAAGCAATCTCTGTaGGCTCTAACATACAAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRAKQSL*ALTYKS Trigger: AGACTTGTATGTTAGAGCCCACAGAGATTGCTTTGC...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAAAAGCGATACAATGCTaGTCTTTCTCCACTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRKAIQC*SFSTEL Trigger: CAGTTCAGTGGAGAAAGACCAGCATTGTATCGCTTT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAACAATTTGTCTGATTTaGGCCTTTGCAACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRTICLI*AFATQQ Trigger: CTGCTGTGTTGCAAAGGCCCAAATCAGACAAATTGT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAGCTCTTCAGCCCACTTaGAAAGTGTATACTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTALQPT*KVYTEK Trigger: CTTTTCAGTATACACTTTTCAAGTGGGCTGAAGAGC...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGCTCTTCAGCCCACTTaGAAAGTGTATACTGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRALQPT*KVYTEK Trigger: CTTTTCAGTATACACTTTTCAAGTGGGCTGAAGAGC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGACACTGCCTTCTGGATTaGTGCATTATAAACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRHCLLD*CIINHV Trigger: AACATGGTTTATAATGCAGCAATCCAGAAGGCAGTG...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAATTTTCCATCTTGTTTaGAGCCACTACATCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTIFHLV*SHYITG Trigger: GCCTGTGATGTAGTGGCTGCAAACAAGATGGAAAAT...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTATTTTCCATCTTGTTTaGAGCCACTACATCACAGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFIFHLV*SHYITG Trigger: GCCTGTGATGTAGTGGCTGCAAACAAGATGGAAAAT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATTCTCCAAATACACCTaGATCGACAGTTTCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRFSKYT*IDSFCY Trigger: GTAACAGAAACTGTCGATGCAGGTGTATTTGGAGAA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTTCCAAAGCGATACAATaGTGGTCTTTCTCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFSKAIQ*WSFSTE Trigger: TTCAGTGGAGAAAGACCAGCATTGTATCGCTTTGGA...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGTCCAAAGCGATACAATaGTGGTCTTTCTCCACTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRSKAIQ*WSFSTE Trigger: TTCAGTGGAGAAAGACCAGCATTGTATCGCTTTGGA...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTATTATCCAGAACAACTaGAGCTTGTTTCCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFIIQNN*SLFPVG Trigger: TCCCACTGGAAACAAGCTGCAGTTGTTCTGGATAAT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATATTATCCAGAACAACTaGAGCTTGTTTCCAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDIIQNN*SLFPVG Trigger: TCCCACTGGAAACAAGCTGCAGTTGTTCTGGATAAT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATAGGCGAGTTCATACATaGTCTTGGATAATTCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDRRVHT*SWIIHR Trigger: CCTGTGAATTATCCAAGACCATGTATGAACTCGCCT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATATAACAGCACCGGCTaGTATCACTTTCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTYNSTG*YHFPIL Trigger: AAGTATGGGAAAGTGATACCAGCCGGTGCTGTTATA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTATAACAGCACCGGCTaGTATCACTTTCCCATACTT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVYNSTG*YHFPIL Trigger: AAGTATGGGAAAGTGATACCAGCCGGTGCTGTTATA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATAAAGCGATACAATGCTaGTCTTTCTCCACTGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDKAIQC*SFSTEL Trigger: CAGTTCAGTGGAGAAAGACCAGCATTGTATCGCTTT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTACAATTTGTCTGATTTaGGCCTTTGCAACACAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVTICLI*AFATQQ Trigger: CTGCTGTGTTGCAAAGGCCCAAATCAGACAAATTGT...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATTGAAAAGTGTATACTaGAAAGTTTCCTTCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRLKSVY*KVSFTS Trigger: CGACGTGAAGGAAACTTTTCAGTATACACTTTTCAA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTCTCCTTTGCATCATTaGAATCAGGGTTTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVSPLHH*NQGLAS Trigger: TGAAGCTAAACCCTGATTTCAATGATGCAAAGGAGA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTCTCCTTTGCATCATTaGAATCAGGGTTTAGCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDSPLHH*NQGLAS Trigger: TGAAGCTAAACCCTGATTTCAATGATGCAAAGGAGA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAGTCTTAAAGCCTTCATaGTACGGAATGTTATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRVLKPS*YGMLLS Trigger: GCTTAATAACATTCCGTATCATGAAGGCTTTAAGAC...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACTGCCTTCTGGATTaGTGCATTATAAACCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFHCLLD*CIINHV Trigger: AACATGGTTTATAATGCAGCAATCCAGAAGGCAGTG...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCTCCAAATACACCTaGATCGACAGTTTCTGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTFSKYT*IDSFCY Trigger: GTAACAGAAACTGTCGATGCAGGTGTATTTGGAGAA...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACTCTTTGGTCTTTGGTTaGAGAAGTAAATGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHSLVFG*RSKCSH Trigger: ATGGGAACATTTACTTCTGCAACCAAAGACCAAAGA...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATATTTCATGTTCCAAATaGAAGATACTGATCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDISCSK*KILIPW Trigger: CCAGGGGATCAGTATCTTGCATTTGGAACATGAAAT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACTGCAATAAACATCTaGATATTGCAGCCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHTAINI*ILQPFP Trigger: TGGAAAAGGCTGCAATATCCAGATGTTTATTGCAGT...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR TCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTTTGAAAAGTGTATACTaGAAAGTTTCCTTCACGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFLKSVY*KVSFTS Trigger: CGACGTGAAGGAAACTTTTCAGTATACACTTTTCAA...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 36% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR TCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATGTCTTAAAGCCTTCATaGTACGGAATGTTATTAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDVLKPS*YGMLLS Trigger: GCTTAATAACATTCCGTATCATGAAGGCTTTAAGAC...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTCTTTGGTCTTTGGTTaGAGAAGTAAATGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVSLVFG*RSKCSH Trigger: ATGGGAACATTTACTTCTGCAACCAAAGACCAAAGA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGTCTTTGGTCTTTGGTTaGAGAAGTAAATGTTCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRSLVFG*RSKCSH Trigger: ATGGGAACATTTACTTCTGCAACCAAAGACCAAAGA...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAATCTTGCCTCCAGACTaGAATAAACATCTGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTILPPD*NKHLDI Trigger: AATATCCAGATGTTTATTGCAGTCTGGAGGCAAGAT...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTATCTTGCCTCCAGACTaGAATAAACATCTGGATATT | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVILPPD*NKHLDI Trigger: AATATCCAGATGTTTATTGCAGTCTGGAGGCAAGAT...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACGTTCATACATGGTCTTaGATAATTCACAGGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: WALLLQPLNIFDDSRDFHVHTWS*IIHRHI Trigger: TATATGCCTGTGAATTATCCAAGACCATGTATGAAC...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGAACATTAAGAGAGTGTaGCTTCTTAGTTGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRNIKRV*LLSCKT Trigger: AGTCTTGCAACTAAGAAGCCACACTCTCTTAATGTT...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTAACATTAAGAGAGTGTaGCTTCTTAGTTGCAAGACT | + |
|
Preference number: 4 (lower is better) Translates to: TWALLLQPLNIFDDSRDFNIKRV*LLSCKT Trigger: AGTCTTGCAACTAAGAAGCCACACTCTCTTAATGTT...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATATTCATCATCAAGCTaGAGAACAAACCAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRYSSSS*RTNQTI Trigger: TATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CCA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATACTGCAATAAACATCTaGATATTGCAGCCTTTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTWALLLQPLNIFDDSRDTAINI*ILQPFP Trigger: TGGAAAAGGCTGCAATATCCAGATGTTTATTGCAGT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR GCA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAACTCTTTCAGGAATGTaGTTCGGAATTTCTATATCA | + |
|
Preference number: 4 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTTLSGM*FGISIS Trigger: TGATATAGAAATTCCGAAGCACATTCCTGAAAGAGT...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000056237.15 |
||
| CDS-3UTR CCA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGTTCATACATGGTCTTaGATAATTCACAGGCATATA | + |
|
Preference number: 4 (lower is better) Translates to: LLTWALLLQPLNIFDDSRVHTWS*IIHRHI Trigger: TATATGCCTGTGAATTATCCAAGACCATGTATGAAC...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS-3UTR CCA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTATTCATCATCAAGCTaGAGAACAAACCAAACCATA | + |
|
Preference number: 4 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVYSSSS*RTNQTI Trigger: TATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 34% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS GCA 90 bp | AGTCCCCGTGCCGATATCCAGAACGGTTCTGGAGCCCAGGCACACTaGCTTCTGGATTGCTGCATTATAAACCATGTTTCTCCTGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SPRADIQNGSGAQAH*LLDCCIINHVSPGV Trigger: GACACCAGGAGAAACATGGTTTATAATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGATATCGGCACGGGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS TCA 90 bp | ACTGAAAAGTTTCCTTCACGTCGTCTTTTAGCTCTGGCGCCAGGCTaGGCACCAGAAGGTAATGGGCATAAGCAGTGCCGAAGTCCTGGT | + |
|
Preference number: 5 (lower is better) Translates to: TEKFPSRRLLALAPG*APEGNGHKQCRSPG Trigger: ACCAGGACTTCGGCACTGCTTATGCCCATTACCTTCTGGTGCTCAGCCTGGCGCCAGAGCTAAAAGACGACGTGAAGGAAACTTTTCAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS CCA 90 bp | ACATGCTCAGTATTCCAGTCCCCGTGCCGATATCCAGAACGGTTCTaGAGCCCAGGCACACTGCCTTCTGGATTGCTGCATTATAAACCA | + |
|
Preference number: 5 (lower is better) Translates to: TCSVFQSPCRYPERF*SPGTLPSGLLHYKP Trigger: TGGTTTATAATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGATATCGGCACGGGGACTGGAATACTGAGCATGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
||
| CDS GCA 90 bp | ACCAGCAATGTCCTTAGCACCAACCCTATGATGCCTTCGTATCTCTaGACACTCGACTGCCATCCCAAATATAACAGCACCGGCTGGTAT | + |
|
Preference number: 5 (lower is better) Translates to: TSNVLSTNPMMPSYL*TLDCHPKYNSTGWY Trigger: ATACCAGCCGGTGCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCATCATAGGGTTGGTGCTAAGGACATTGCTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS GCA 90 bp | CTTAGCACCAACCCTATGATGCCTTCGTATCTCTGCACACTCGACTaGCATCCCAAATATAACAGCACCGGCTGGTATCACTTTCCCATA | + |
|
Preference number: 5 (lower is better) Translates to: LSTNPMMPSYLCTLD*HPKYNSTGWYHFPI Trigger: TATGGGAAAGTGATACCAGCCGGTGCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCATCATAGGGTTGGTGCTAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
||
| CDS-3UTR CAA 90 bp | GAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGGTGCAGCTTCTCCTTTGCATCATaGAAATCAGGGTTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EAFRHIEHIERVSGAWCSFSFAS*KSGFSF Trigger: GAAGCTAAACCCTGATTTCAATGATGCAAAGGAGAA...GCTGCACCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
||
| CDS GCA 90 bp | GGTGTCATTAAGCATGATGAAGTGCCAGCGCTCCACCAGCCAGTTTaGTACGCGGTAAAAGTTCTCCTTTGCATCATTGAAATCAGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: GVIKHDEVPALHQPV*YAVKVLLCIIEIRV Trigger: AACCCTGATTTCAATGATGCAAAGGAGAACTTTTACCGCGTAGCAAACTGGCTGGTGGAGCGCTGGCACTTCATCATGCTTAATGACACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | AAGAGAGAAGCCTTCAGACACATCGAGCACATAGAAAGGGTCAGCGGTGCTTGGATCCCATTTTCCATCTaGTTTGCAGCCACTACATCA | + |
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Preference number: 5 (lower is better) Translates to: KREAFRHIEHIERVSGAWIPFSI*FAATTS Trigger: TGATGTAGTGGCTGCAAACAAGATGGAAAATGGGAT...CCAAGCACCGCTGACCCTTTCTATGTGCTCGATGTGTCTGAAGGCTTCTCTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| CDS GCA 90 bp | ATCCAGAACGGTTCTGGAGCCCAGGCACACTGCCTTCTGGATTGCTaGATTATAAACCATGTTTCTCCTGGTGTCATTAAGCATGATGAA | + |
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Preference number: 5 (lower is better) Translates to: IQNGSGAQAHCLLDC*IINHVSPGVIKHDE Trigger: TTCATCATGCTTAATGACACCAGGAGAAACATGGTTTATAATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTGGATGGGATTATCCAGAACAACTGCAGCTTGTTTCCAGTGGGAGGCTTCACCTGCTCTCCCATACTGTaGCAAATCACTTCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: LDGIIQNNCSLFPVGGFTCSPIL*QITSSS Trigger: TGATGATGAAGTGATTTGCAACAGTATGGGAGAGCA...GGTGAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTCTGGATAATCCCATCCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| CDS CCA 90 bp | TTTCCATCTTGTTTGCAGCCACTACATCACAGGCGAGTTCATACATaGTCTTGGATAATTCACAGGCATATACTGATTGTGCGCCAGCTT | + |
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Preference number: 5 (lower is better) Translates to: FPSCLQPLHHRRVHT*SWIIHRHILIVRQL Trigger: AAGCTGGCGCACAATCAGTATATGCCTGTGAATTATCCAAGACCATGTATGAACTCGCCTGTGATGTAGTGGCTGCAAACAAGATGGAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | ACCAGGCTGTATGCAGTAGTCTTCAAGGGCCTGTACTGGATAAACAGCCTGTTCAGTTCATACATGGTCTaGGATAATTCACAGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: TRLYAVVFKGLYWINSLFSSYMV*DNSQAY Trigger: ATATGCCTGTGAATTATCCAAGACCATGTATGAACT...GAACAGGCTGTTTATCCAGTACAGGCCCTTGAAGACTACTGCATACAGCCTGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACCAGAACAACTGCAGCTaGTTTCCAGTGGGAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: WALLLQPLNIFDDSRDFHQNNCS*FPVGGF Trigger: GAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTCTG...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS TCA 90 bp | GTAAGTCTTGTATTCGGCTCAGTGCATGAAGCTCTTCAGCCCACTTaGAAAGTGTATACTGAAAAGTTTCCTTCACGTCGTCTTTTAGCT | + |
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Preference number: 5 (lower is better) Translates to: VSLVFGSVHEALQPT*KVYTEKFPSRRLLA Trigger: AGCTAAAAGACGACGTGAAGGAAACTTTTCAGTATACACTTTTCAAGTGGGCTGAAGAGCTTCATGCACTGAGCCGAATACAAGACTTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGCAGAACAACTGCAGCTaGTTTCCAGTGGGAGGCTTC | + |
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Preference number: 5 (lower is better) Translates to: LLTWALLLQPLNIFDDSRQNNCS*FPVGGF Trigger: GAAGCCTCCCACTGGAAACAAGCTGCAGTTGTTCTG...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS-3UTR CAA 90 bp | TATTCATCATCAAGCTGGAGAACAAACCAAACCATAATAGCATCTAGCACGCCTACACTGCCTTCTGGATaGCTGCATTATAAACCATGT | + |
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Preference number: 5 (lower is better) Translates to: YSSSSWRTNQTIIASSTPTLPSG*LHYKPC Trigger: ACATGGTTTATAATGCAGCAATCCAGAAGGCAGTGT...AGGCGTGCTAGATGCTATTATGGTTTGGTTTGTTCTCCAGCTTGATGATGAATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACAGTATGTTCTGTCCCTaGAACCGCACTCTCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: WALLLQPLNIFDDSRDFHSMFCP*NRTLFY Trigger: GTAGAAGAGAGTGCGGTTCAAGGGACAGAACATACT...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGACATTTTCCATCTTGTTaGCAGCCACTACATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRHFPSC*QPLHHR Trigger: CCTGTGATGTAGTGGCTGCAAACAAGATGGAAAATG...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACAAGTATGTTCTGTCCCTaGAACCGCACTCTCTTCTAC | + |
|
Preference number: 5 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTSMFCP*NRTLFY Trigger: GTAGAAGAGAGTGCGGTTCAAGGGACAGAACATACT...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAACACTGCCTTCTGGATaGCTGCATTATAAACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRTLPSG*LHYKPC Trigger: ACATGGTTTATAATGCAGCAATCCAGAAGGCAGTGT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | GCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACACATTTTCCATCTTGTTaGCAGCCACTACATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: ALLLQPLNIFDDSRDFHTHFPSC*QPLHHR Trigger: CCTGTGATGTAGTGGCTGCAAACAAGATGGAAAATG...TGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCATTTTCCATCTTGTTaGCAGCCACTACATCACAGG | + |
|
Preference number: 5 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVHFPSC*QPLHHR Trigger: CCTGTGATGTAGTGGCTGCAAACAAGATGGAAAATG...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAATCCCATTTTCCATCTaGTTTGCAGCCACTACATCA | + |
|
Preference number: 5 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRIPFSI*FAATTS Trigger: TGATGTAGTGGCTGCAAACAAGATGGAAAATGGGAT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTGCTCTCCCATACTGTaGCAAATCACTTCATCATCA | + |
|
Preference number: 5 (lower is better) Translates to: LTWALLLQPLNIFDDSRDCSPIL*QITSSS Trigger: TGATGATGAAGTGATTTGCAACAGTATGGGAGAGCA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGATTCTCCTTTGCATCATaGAAATCAGGGTTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRFSFAS*KSGFSF Trigger: GAAGCTAAACCCTGATTTCAATGATGCAAAGGAGAA...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGACACTGCCTTCTGGATaGCTGCATTATAAACCATGT | + |
|
Preference number: 5 (lower is better) Translates to: LLTWALLLQPLNIFDDSRTLPSG*LHYKPC Trigger: ACATGGTTTATAATGCAGCAATCCAGAAGGCAGTGT...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGATCCCATTTTCCATCTaGTTTGCAGCCACTACATCA | + |
|
Preference number: 5 (lower is better) Translates to: LLTWALLLQPLNIFDDSRIPFSI*FAATTS Trigger: TGATGTAGTGGCTGCAAACAAGATGGAAAATGGGAT...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | CAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTCGAATAAACATCTGGATATaGCAGCCTTTTCCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: QPLNIFDDSRDFHTFIVRINIWI*QPFPSA Trigger: AGCTGATGGAAAAGGCTGCAATATCCAGATGTTTAT...TCGAACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS-3UTR CAA 90 bp | TTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACACATTCATTGTTTTCTCCTTTGCATCATaGAAATCAGGGTTTAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LQPLNIFDDSRDFHTFIVFSFAS*KSGFSF Trigger: GAAGCTAAACCCTGATTTCAATGATGCAAAGGAGAA...AACAATGAATGTGTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCACTTTCCATTTTCTTCTTaGGTCTTTGGTTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: WALLLQPLNIFDDSRDFHFPFSS*VFGCRS Trigger: ACTTCTGCAACCAAAGACCAAAGAAGAAAATGGAAA...GTGAAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATATAAACATCTGGATATaGCAGCCTTTTCCATCAGCT | + |
|
Preference number: 5 (lower is better) Translates to: LTWALLLQPLNIFDDSRDINIWI*QPFPSA Trigger: AGCTGATGGAAAAGGCTGCAATATCCAGATGTTTAT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS-3UTR CAA 90 bp | CTTTTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGAGTTCATACATGGTCTaGGATAATTCACAGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LLTWALLLQPLNIFDDSRSSYMV*DNSQAY Trigger: ATATGCCTGTGAATTATCCAAGACCATGTATGAACT...CCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAAAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATAGTTCATACATGGTCTaGGATAATTCACAGGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: LTWALLLQPLNIFDDSRDSSYMV*DNSQAY Trigger: ATATGCCTGTGAATTATCCAAGACCATGTATGAACT...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | TTAACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTCCATTTTCTTCTTaGGTCTTTGGTTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: LTWALLLQPLNIFDDSRDFPFSS*VFGCRS Trigger: ACTTCTGCAACCAAAGACCAAAGAAGAAAATGGAAA...ATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGTTAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS-3UTR CAA 90 bp | ACATGGGCTTTATTATTGCAACCCTTAAACATTTTTGATGACTCCAGGGATTTTTTTCCATTTTCTTCTTaGGTCTTTGGTTGCAGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: TWALLLQPLNIFDDSRDFFPFSS*VFGCRS Trigger: ACTTCTGCAACCAAAGACCAAAGAAGAAAATGGAAA...AAAATCCCTGGAGTCATCAAAAATGTTTAAGGGTTGCAATAATAAAGCCCATGT 36% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS GCA 72 bp | CCGAAGTCCTGGTCACCTAGACAGTGCTCAGCACTCTaGAAGGACCGTGCCACCAGCCGGTCCCGGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PKSWSPRQCSAL*KDRATSRSRPA Trigger: GGCCGGCCGGGACCGGCTGGTGGCACGGTCCTTGCAGAGTGCTGAGCACTGTCTAGGTGACCAGGACTTCGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS CCA 72 bp | GTATTCCAGTCCCCGTGCCGATATCCAGAACGGTTCTaGAGCCCAGGCACACTGCCTTCTGGATTGCTGCAT | + |
|
Preference number: 6 (lower is better) Translates to: VFQSPCRYPERF*SPGTLPSGLLH Trigger: ATGCAGCAATCCAGAAGGCAGTGTGCCTGGGCTCCAGAACCGTTCTGGATATCGGCACGGGGACTGGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS TCA 72 bp | TTTCCTTCACGTCGTCTTTTAGCTCTGGCGCCAGGCTaGGCACCAGAAGGTAATGGGCATAAGCAGTGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: FPSRRLLALAPG*APEGNGHKQCR Trigger: TCGGCACTGCTTATGCCCATTACCTTCTGGTGCTCAGCCTGGCGCCAGAGCTAAAAGACGACGTGAAGGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS GCA 72 bp | AACCCTATGATGCCTTCGTATCTCTGCACACTCGACTaGCATCCCAAATATAACAGCACCGGCTGGTATCAC | + |
|
Preference number: 6 (lower is better) Translates to: NPMMPSYLCTLD*HPKYNSTGWYH Trigger: GTGATACCAGCCGGTGCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCATCATAGGGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS GCA 72 bp | GTCCTTAGCACCAACCCTATGATGCCTTCGTATCTCTaGACACTCGACTGCCATCCCAAATATAACAGCACC | + |
|
Preference number: 6 (lower is better) Translates to: VLSTNPMMPSYL*TLDCHPKYNST Trigger: GGTGCTGTTATATTTGGGATGGCAGTCGAGTGTGCAGAGATACGAAGGCATCATAGGGTTGGTGCTAAGGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 |
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| CDS CCA 72 bp | CAGCCACTACATCACAGGCGAGTTCATACATGGTCTTaGATAATTCACAGGCATATACTGATTGTGCGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: QPLHHRRVHTWS*IIHRHILIVRQ Trigger: CTGGCGCACAATCAGTATATGCCTGTGAATTATCCAAGACCATGTATGAACTCGCCTGTGATGTAGTGGCTG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS CCA 72 bp | TGTTTGCAGCCACTACATCACAGGCGAGTTCATACATaGTCTTGGATAATTCACAGGCATATACTGATTGTG | + |
|
Preference number: 6 (lower is better) Translates to: CLQPLHHRRVHT*SWIIHRHILIV Trigger: CACAATCAGTATATGCCTGTGAATTATCCAAGACCATGTATGAACTCGCCTGTGATGTAGTGGCTGCAAACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS CAA 90 bp | CAAGTGACTTCATATGTAGAAGCTTTATCCCATTTTCCATCTTGTTaGCAGCCACTACATCACAGGCGAGTTCATACATGGTCTTGGATA | + |
|
Preference number: 6 (lower is better) Translates to: QVTSYVEALSHFPSC*QPLHHRRVHTWSWI Trigger: TATCCAAGACCATGTATGAACTCGCCTGTGATGTAGTGGCTGCAAACAAGATGGAAAATGGGATAAAGCTTCTACATATGAAGTCACTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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| CDS CAA 90 bp | ATATCAAGTGACTTCATATGTAGAAGCTTTATCCCATTTTCCATCTaGTTTGCAGCCACTACATCACAGGCGAGTTCATACATGGTCTTG | + |
|
Preference number: 6 (lower is better) Translates to: ISSDFICRSFIPFSI*FAATTSQASSYMVL Trigger: CAAGACCATGTATGAACTCGCCTGTGATGTAGTGGCTGCAAACAAGATGGAAAATGGGATAAAGCTTCTACATATGAAGTCACTTGATAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000056237.15 ENSMUST00000118622.2 ENSMUST00000210040.2 |
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