Pregenerated sensors for PRMT8 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030350Ensembl transcript IDs: ENSMUST00000032500.9
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TGGTGTGGTCCTCCTAACAGTATTCCTTGGGGCAGCGTGGCAGACTaGAGTGAGTGCCTCTTCTTGCTCGCTCTCCGCAGCTTCCCACGT | + |
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Preference number: 1 (lower is better) Translates to: WCGPPNSIPWGSVAD*SECLFLLALRSFPR Trigger: ACGTGGGAAGCTGCGGAGAGCGAGCAAGAAGAGGCACTCACTTCAGTCTGCCACGCTGCCCCAAGGAATACTGTTAGGAGGACCACACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | GGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTaGAAAGCTCTGGTTGGTGTGGTCCTCCTAACAGTATTCCTTGGG | + |
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Preference number: 1 (lower is better) Translates to: GPGEPWASSPIFKAE*KALVGVVLLTVFLG Trigger: CCCAAGGAATACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | CTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTaGTGTGGTCCTCCTAACAGTATTCCTTGGGGCAGCGTGGCAGAC | + |
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Preference number: 1 (lower is better) Translates to: LGKFANLQGRVESSG*CGPPNSIPWGSVAD Trigger: GTCTGCCACGCTGCCCCAAGGAATACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR TCA 90 bp | CACACACACACACACACACACACACACACACACACACCCTCAGAATaGACACCCAACTATGCCCACTTAGTTGTATATGCATGCATATAC | + |
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Preference number: 1 (lower is better) Translates to: HTHTHTHTHTHTPSE*TPNYAHLVVYACIY Trigger: GTATATGCATGCATATACAACTAAGTGGGCATAGTTGGGTGTTCATTCTGAGGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | CACACACATACACTCTCACACAAACCACCACACAGACAGAAAATCTaGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGAA | + |
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Preference number: 1 (lower is better) Translates to: HTHTLSHKPPHRQKI*LMLSKTLCLQVLAE Trigger: TTCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATTTTCTGTCTGTGTGGTGGTTTGTGTGAGAGTGTATGTGTGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | CCCAACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTaGTGGGCAAGTAAATTAATATATATGCTGTACACACACACACTG | + |
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Preference number: 1 (lower is better) Translates to: PNYAHLVVYACIYRC*WASKLIYMLYTHTL Trigger: CAGTGTGTGTGTGTACAGCATATATATTAATTTACTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTTGGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | CACAGAATGTTTCATAGCTGTGTAACATCTGTTACGGGATCAGGATaGGGAAAACTAATCACGAAACAAATTCCTATTCAAAAGCAACAG | + |
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Preference number: 1 (lower is better) Translates to: HRMFHSCVTSVTGSG*GKLITKQIPIQKQQ Trigger: CTGTTGCTTTTGAATAGGAATTTGTTTCGTGATTAGTTTTCCCCATCCTGATCCCGTAACAGATGTTACACAGCTATGAAACATTCTGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 90 bp | AACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGGTaGGCAAGTAAATTAATATATATGCTGTACACACACACACTGGCA | + |
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Preference number: 1 (lower is better) Translates to: NYAHLVVYACIYRCW*ASKLIYMLYTHTLA Trigger: TGCCAGTGTGTGTGTGTACAGCATATATATTAATTTACTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR-3UTR CCA 90 bp | CATGGGTATGCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACAGCAGAGCAGAGGACCTaGAGGCTCCCTGTGATGGCG | + |
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Preference number: 2 (lower is better) Translates to: HGYASILRAPAIARKATTAEQRT*RLPVMA Trigger: CGCCATCACAGGGAGCCTCCAGGTCCTCTGCTCTGC...TGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGCATACCCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR-3UTR CCA 90 bp | AGTCAGTTTAGGAGAACAATGGGGGCACATGGGTATGCTTCCATCCTCAGAGCCGGCCCAGGAGAGCCCTaGGCAAGTTCGCCAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: SQFRRTMGAHGYASILRAGPGEP*ASSPIF Trigger: GAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCC...GGCTCTGAGGATGGAAGCATACCCATGTGCCCCCATTGTTCTCCTAAACTGACT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR-3UTR TCA 90 bp | AGTCAGTTTAGGAGAACAATGGGGGCACATGGGTATGCTTCCATCCTCAGAGCCACAACAAAGCCTTTGTaGAGGGCTCCAGGGGCAGAG | + |
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Preference number: 2 (lower is better) Translates to: SQFRRTMGAHGYASILRATTKPL*RAPGAE Trigger: CTCTGCCCCTGGAGCCCTTCACAAAGGCTTTGTTGT...GGCTCTGAGGATGGAAGCATACCCATGTGCCCCCATTGTTCTCCTAAACTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATGGCAGCGTGGCAGACTaGAGTGAGTGCCTCTTCTTG | + |
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Preference number: 2 (lower is better) Translates to: QSHSLVRTRPELVHRMFHGSVAD*SECLFL Trigger: CAAGAAGAGGCACTCACTTCAGTCTGCCACGCTGCC...ATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | GGTGTGGTCCTCCTAACAGTATTCCTTGGGGCAGCGTaGCAGACTGAAGTGAGTGCCTCTTCTTGCTCGCTC | + |
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Preference number: 3 (lower is better) Translates to: GVVLLTVFLGAA*QTEVSASSCSL Trigger: GAGCGAGCAAGAAGAGGCACTCACTTCAGTCTGCCACGCTGCCCCAAGGAATACTGTTAGGAGGACCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | GAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTaGAAAGCTCTGGTTGGTGTGGTCCTCCTAACAGTA | + |
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Preference number: 3 (lower is better) Translates to: EPWASSPIFKAE*KALVGVVLLTV Trigger: TACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | TTCGCCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTaGTGTGGTCCTCCTAACAGTATTCCTTGGGGCAGC | + |
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Preference number: 3 (lower is better) Translates to: FANLQGRVESSG*CGPPNSIPWGS Trigger: GCTGCCCCAAGGAATACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | TTCTCATGTGTGTTTATTGAGCGCCGACAGAGCCCGTaGTACTGTGCTCAGGATTCAGAGCCACAGTCTAGT | + |
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Preference number: 3 (lower is better) Translates to: FSCVFIERRQSP*YCAQDSEPQSS Trigger: ACTAGACTGTGGCTCTGAATCCTGAGCACAGTACCACGGGCTCTGTCGGCGCTCAATAAACACACATGAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | TTTCATAGCTGTGTAACATCTGTTACGGGATCAGGATaGGGAAAACTAATCACGAAACAAATTCCTATTCAA | + |
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Preference number: 3 (lower is better) Translates to: FHSCVTSVTGSG*GKLITKQIPIQ Trigger: TTGAATAGGAATTTGTTTCGTGATTAGTTTTCCCCATCCTGATCCCGTAACAGATGTTACACAGCTATGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| 3UTR CCA 72 bp | GCCCACTTAGTTGTATATGCATGCATATACAGATGTTaGTGGGCAAGTAAATTAATATATATGCTGTACACA | + |
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Preference number: 3 (lower is better) Translates to: AHLVVYACIYRC*WASKLIYMLYT Trigger: TGTGTACAGCATATATATTAATTTACTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCGCAGCTTGGACATCTTaGCCCGTCCAGGGCAGCTGG | + |
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Preference number: 4 (lower is better) Translates to: GPRRALGKFANLQGRVESAAWTS*PVQGSW Trigger: CCAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGC...GCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | GTGTTTATTGAGCGCCGACAGAGCCCGTGGTACTGTGCTCAGGATTCAGAGCCACAGGCTTGGCTGGAATaGCAGGCTGAGGGGGCTGAG | + |
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Preference number: 4 (lower is better) Translates to: VFIERRQSPWYCAQDSEPQAWLE*QAEGAE Trigger: CTCAGCCCCCTCAGCCTGTCATTCCAGCCAAGCCTG...TGGCTCTGAATCCTGAGCACAGTACCACGGGCTCTGTCGGCGCTCAATAAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | GGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCTCCCAAACACCTTCTTaGCCCCTGCTTTGGCGGCAA | + |
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Preference number: 4 (lower is better) Translates to: GPRRALGKFANLQGRVESSQTPS*PLLWRQ Trigger: TTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGA...GCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CATGGGTATGCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACACCAGGGGCTCCTTCATaGCAACATCCCGGATGCAGG | + |
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Preference number: 4 (lower is better) Translates to: HGYASILRAPAIARKATTPGAPS*QHPGCR Trigger: CCTGCATCCGGGATGTTGCCATGAAGGAGCCCCTGG...TGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGCATACCCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | GTATTCCTTGGGGCAGCGTGGCAGACTGAAGTGAGTGCCTCTTCTTGCTCGCTCGGTCACCACTTGCTTTaGGTCCACGATGTCCACCAG | + |
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Preference number: 4 (lower is better) Translates to: VFLGAAWQTEVSASSCSLGHHLL*VHDVHQ Trigger: CTGGTGGACATCGTGGACCCAAAGCAAGTGGTGACC...GAGCGAGCAAGAAGAGGCACTCACTTCAGTCTGCCACGCTGCCCCAAGGAATAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | GGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCTACCACGTACAAAGCTaGCCGGTCTGGAAACATAAG | + |
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Preference number: 4 (lower is better) Translates to: GPRRALGKFANLQGRVESYHVQS*PVWKHK Trigger: CTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTA...GCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CATGGGTATGCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACACAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: HGYASILRAPAIARKATTQSCPV*KHKPSR Trigger: CCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTG...TGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGCATACCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | GGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCAATCCAAGTCTACTGTaGAATCGAGGTCTCGCACAT | + |
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Preference number: 4 (lower is better) Translates to: GPRRALGKFANLQGRVESNPSLL*NRGLAH Trigger: ATGTGCGAGACCTCGATTTCACAGTAGACTTGGATT...GCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | GCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACAAAGCCTTTGCTTTGGCGGCAAACATaGAAAGGATCCCTGTGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ASILRAPAIARKATTKPLLWRQT*KGSLCH Trigger: GTGGCACAGGGATCCTTTCCATGTTTGCCGCCAAAG...CAAAGGCTTTGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTGGTGTGGTCCTCCTAACAGTATTGCACAGGCTTGGCTaGAATGACAGGCTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: PIFKAEWKALVGVVLLTVLHRLG*NDRLRG Trigger: CCCCCTCAGCCTGTCATTCCAGCCAAGCCTGTGCAA...TACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATCGGGGTTCAGCAGCTTaGACATCTTGCCCCGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: QSHSLVRTRPELVHRMFHRGSAA*TSCPVQ Trigger: CTGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCG...ATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | CAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATGGCAGAAGGCAGACGTaGAGGACAGCTCTTCCGTCT | + |
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Preference number: 4 (lower is better) Translates to: QSHSLVRTRPELVHRMFHGRRQT*RTALPS Trigger: AGACGGAAGAGCTGTCCTTCACGTCTGCCTTCTGCC...ATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CATGGGTATGCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACATGTGTGGATACATGGTaGACACATTGCACAGGCTTG | + |
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Preference number: 4 (lower is better) Translates to: HGYASILRAPAIARKATTCVDTW*THCTGL Trigger: CAAGCCTGTGCAATGTGTCCACCATGTATCCACACA...TGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGCATACCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | CTCCAGGTTCTAGCGGAAGTAACCTGTCCTAGATGTCTGCAGCATGCAAAACTTTGGAGTTCCGGTACGTaGGTGTCCTCACCTCGTCTT | + |
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Preference number: 4 (lower is better) Translates to: LQVLAEVTCPRCLQHAKLWSSGT*VSSPRL Trigger: AAGACGAGGTGAGGACACTCACGTACCGGAACTCCA...AAGTTTTGCATGCTGCAGACATCTAGGACAGGTTACTTCCGCTAGAACCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | CTCCAGGTTCTAGCGGAAGTAACCTGTCCTAGATGTCTGCAGCATGCAAAACTTCACCTTCTTGGCCCCTaGTTTGGCGGCAAACATGGA | + |
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Preference number: 4 (lower is better) Translates to: LQVLAEVTCPRCLQHAKLHLLGP*FGGKHG Trigger: TCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTG...AAGTTTTGCATGCTGCAGACATCTAGGACAGGTTACTTCCGCTAGAACCTGGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | CCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTGGTGTGGTCCTCCTAACAGTACTCGGTGCTTTCGACTaGATTCTCCGCCATTTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PIFKAEWKALVGVVLLTVLGAFD*ILRHFP Trigger: AGGAAAATGGCGGAGAATGCAGTCGAAAGCACCGAG...TACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | AGAGTCAGTTTAGGAGAACAATGGGGGCACATGGGTATGCTTCCATCCTCAGAGTGGAAAGGATCCCTGTaGCACTCCCAACATCCAGTA | + |
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Preference number: 4 (lower is better) Translates to: RVSLGEQWGHMGMLPSSEWKGSL*HSQHPV Trigger: TACTGGATGTTGGGAGTGGCACAGGGATCCTTTCCA...CTCTGAGGATGGAAGCATACCCATGTGCCCCCATTGTTCTCCTAAACTGACTCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | CACACACACACACACACCCTCAGAATGAACACCCAACTATGCCCACTTAGTTGTGGCAGCTGGGCTGTGTaGATACATGGTGGACACATT | + |
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Preference number: 4 (lower is better) Translates to: HTHTHTLRMNTQLCPLSCGSWAV*IHGGHI Trigger: AATGTGTCCACCATGTATCCACACAGCCCAGCTGCC...ACAACTAAGTGGGCATAGTTGGGTGTTCATTCTGAGGGTGTGTGTGTGTGTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | ACAGAAAATCTGGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGACCCGTCCAGGGCAGCTaGGCTGTGTGGATACATGGT | + |
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Preference number: 4 (lower is better) Translates to: TENLAYAIKDTMSPGSSGPVQGS*AVWIHG Trigger: ACCATGTATCCACACAGCCCAGCTGCCCTGGACGGG...TCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATTTTCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | GTGTTTATTGAGCGCCGACAGAGCCCGTGGTACTGTGCTCAGGATTCAGAGCCACACATTTTTGGCATTTaGCTTCATGGATATGGTCCC | + |
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Preference number: 4 (lower is better) Translates to: VFIERRQSPWYCAQDSEPHIFGI*LHGYGP Trigger: GGGACCATATCCATGAAGCCAAATGCCAAAAATGTG...TGGCTCTGAATCCTGAGCACAGTACCACGGGCTCTGTCGGCGCTCAATAAACAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | CAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATTGGCAACATCCCGGATaGAGGTCATGTCAAAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: QSHSLVRTRPELVHRMFHWQHPG*RSCQSH Trigger: ATGGCTTTGACATGACCTGCATCCGGGATGTTGCCA...ATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | CTCACACAAACCACCACACAGACAGAAAATCTGGCTTATGCTATCAAAGACACTTCGTTGCGCTGGATCTaGAGGCAGAAGGCAGACGTG | + |
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Preference number: 4 (lower is better) Translates to: LTQTTTQTENLAYAIKDTSLRWI*RQKADV Trigger: CACGTCTGCCTTCTGCCTGCAGATCCAGCGCAACGA...AGTGTCTTTGATAGCATAAGCCAGATTTTCTGTCTGTGTGGTGGTTTGTGTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | GTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATAGCTGTGTAACATCTCCCCTCTCCGGACAGTaGGGTAGTCTTCTAAGTAGA | + |
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Preference number: 4 (lower is better) Translates to: VRTRPELVHRMFHSCVTSPLSGQ*GSLLSR Trigger: TCTACTTAGAAGACTACCTCACTGTCCGGAGAGGGG...AGATGTTACACAGCTATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | TATATATGCTGTACACACACACACTGGCACACGCACACACATACACTCTCACACACATGGTGGACACATTaGACAGGCTTGGCTGGAATG | + |
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Preference number: 4 (lower is better) Translates to: YICCTHTHWHTHTHTLSHTWWTH*TGLAGM Trigger: CATTCCAGCCAAGCCTGTGCAATGTGTCCACCATGT...GTGTGAGAGTGTATGTGTGTGCGTGTGCCAGTGTGTGTGTGTACAGCATATATA 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | ACAGAAAATCTGGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGAGCATTGGTCACCACTTaGTTTGGGTCCACGATGTCC | + |
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Preference number: 4 (lower is better) Translates to: TENLAYAIKDTMSPGSSGALVTT*FGSTMS Trigger: GGACATCGTGGACCCAAAGCAAGTGGTGACCAATGC...TCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATTTTCTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR GCA 90 bp | CTCACACAAACCACCACACAGACAGAAAATCTGGCTTATGCTATCAAAGACACTCATGGACATAGTCGTTaGGCTGGATCTGCAGGCAGA | + |
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Preference number: 4 (lower is better) Translates to: LTQTTTQTENLAYAIKDTHGHSR*AGSAGR Trigger: TCTGCCTGCAGATCCAGCGCAACGACTATGTCCATG...AGTGTCTTTGATAGCATAAGCCAGATTTTCTGTCTGTGTGGTGGTTTGTGTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR TCA 90 bp | TCAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCAATGACATTGTCCAGGTaGTTGGCCTTAATGATCTTC | + |
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Preference number: 4 (lower is better) Translates to: SEPQSSQNETRASPQNVSMTLSR*LALMIF Trigger: GAAGATCATTAAGGCCAATCACCTGGACAATGTCAT...TGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | TACACTCTCACACAAACCACCACACAGACAGAAAATCTGGCTTATGCTATCAAAGGCTGTGTGGATACATaGTGGACACATTGCACAGGC | + |
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Preference number: 4 (lower is better) Translates to: YTLTQTTTQTENLAYAIKGCVDT*WTHCTG Trigger: GCCTGTGCAATGTGTCCACCATGTATCCACACAGCC...TTTGATAGCATAAGCCAGATTTTCTGTCTGTGTGGTGGTTTGTGTGAGAGTGTA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
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| CDS-3UTR CCA 90 bp | AACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGGTGGGCAAGTTCTTGGCCCCTGCTTTaGCGGCAAACATGGAAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: NYAHLVVYACIYRCWWASSWPLL*RQTWKG Trigger: TCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGA...ACTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CCA 90 bp | CACACACACACACACACCCTCAGAATGAACACCCAACTATGCCCACTTAGTTGTACATTCTCCCACCAGTaGATTTTGAAGTCCTTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HTHTHTLRMNTQLCPLSCTFSHQ*ILKSLY Trigger: GTACAAGGACTTCAAAATCCACTGGTGGGAGAATGT...ACAACTAAGTGGGCATAGTTGGGTGTTCATTCTGAGGGTGTGTGTGTGTGTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR TCA 90 bp | CAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATGTACCACTTTGTCCTTaGACACATGCTTATTATGGT | + |
|
Preference number: 4 (lower is better) Translates to: QSHSLVRTRPELVHRMFHVPLCP*THAYYG Trigger: ACCATAATAAGCATGTGTTCAAGGACAAAGTGGTAC...ATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR GCA 90 bp | CCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTGGTGTGGTCCTCCTAACAGTATTGTCCTTGAACACATaGTTATTATGGTACATGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIFKAEWKALVGVVLLTVLSLNT*LLWYME Trigger: CTCCATGTACCATAATAAGCATGTGTTCAAGGACAA...TACTGTTAGGAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR GCA 90 bp | AATCTGGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGAAGTAACCTGTCTGTCTTCGATTaGTACCACGTACAAAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: NLAYAIKDTMSPGSSGSNLSVFD*YHVQSC Trigger: GCAGCTTTGTACGTGGTAGCAATCGAAGACAGACAG...GTTACTTCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CCA 90 bp | ACAGAAAATCTGGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGATTGGCTTCATGGATATaGTCCCGTAGATTTCCTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TENLAYAIKDTMSPGSSGLASWI*SRRFPP Trigger: GGGAGGAAATCTACGGGACCATATCCATGAAGCCAA...TCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATTTTCTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CCA 90 bp | TATATATGCTGTACACACACACACTGGCACACGCACACACATACACTCTCACACTGGCATTTGGCTTCATaGATATGGTCCCGTAGATTT | + |
|
Preference number: 4 (lower is better) Translates to: YICCTHTHWHTHTHTLSHWHLAS*IWSRRF Trigger: AAATCTACGGGACCATATCCATGAAGCCAAATGCCA...GTGTGAGAGTGTATGTGTGTGCGTGTGCCAGTGTGTGTGTGTACAGCATATATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTCAGTTTAGGAGAACAATGGGGGCACATGGGTATGCTTCCATCCTCAGAGAGTAGTCAGAAATACTaGAACATTCAATCCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: RVSLGEQWGHMGMLPSSESSQKY*NIQSQT Trigger: TGTTTGGGATTGAATGTTCCAGTATTTCTGACTACT...CTCTGAGGATGGAAGCATACCCATGTGCCCCCATTGTTCTCCTAAACTGACTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CCA 90 bp | GTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATAGCTGTGTAACATCTAACACATGCTTATTATaGTACATGGAGTTCCGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: VRTRPELVHRMFHSCVTSNTCLL*YMEFRY Trigger: GTACCGGAACTCCATGTACCATAATAAGCATGTGTT...AGATGTTACACAGCTATGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 90 bp | CCTCGGGGTTCAGCAGCTTGGACATCTTGCCCCGTCCAGGGCAGCTaGGCTGTGTGGATACATGGTGGACACATTGCACAGGCTTGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PRGSAAWTSCPVQGS*AVWIHGGHIAQAWL Trigger: CAGCCAAGCCTGTGCAATGTGTCCACCATGTATCCACACAGCCCAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCGAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | TGGAGGCTCCCTGTGATGGCGGGGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCCACCTCCTCCACTTaGCCCTTAAATATGGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: WRLPVMAGAQESPGQVRQSTSST*PLNMVM Trigger: CATCACCATATTTAAGGGCAAAGTGGAGGAGGTGGA...TTGGCGAACTTGCCCAGGGCTCTCCTGGGCCCCCGCCATCACAGGGAGCCTCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS GCA 90 bp | AATCTCTCGATGTCATCTCCTCGGGGTTCAGCAGCTTGGACATCTTaGCCCGTCCAGGGCAGCTGGGCTGTGTGGATACATGGTGGACAC | + |
|
Preference number: 5 (lower is better) Translates to: NLSMSSPRGSAAWTS*PVQGSWAVWIHGGH Trigger: GTGTCCACCATGTATCCACACAGCCCAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCGAGGAGATGACATCGAGAGATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | GCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCTCTGGTTGGTGTGGTCCTCAGCAGCTTGGACATCTaGCCCCGTCCAGGGCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ASSPIFKAEWKALVGVVLSSLDI*PRPGQL Trigger: CAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGCT...GAGGACCACACCAACCAGAGCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | GTGTTTATTGAGCGCCGACAGAGCCCGTGGTACTGTGCTCAGGATTCAGAGCCATTCTTGGCCCCTGCTTaGGCGGCAAACATGGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: VFIERRQSPWYCAQDSEPFLAPA*AANMER Trigger: CCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAA...TGGCTCTGAATCCTGAGCACAGTACCACGGGCTCTGTCGGCGCTCAATAAACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | CATGGGTATGCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACATGGTCACCACTTGCTTaGGGTCCACGATGTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: HGYASILRAPAIARKATTWSPLA*GPRCPP Trigger: TGGTGGACATCGTGGACCCAAAGCAAGTGGTGACCA...TGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGCATACCCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | GGGCCCAGGAGAGCCCTGGGCAAGTTCGCCAATCTTCAAGGCAGAGTGGAAAGCACATCCAGTACCACTTaGTCCTTGAACACATGCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GPRRALGKFANLQGRVESTSSTT*SLNTCL Trigger: TAAGCATGTGTTCAAGGACAAAGTGGTACTGGATGT...GCTTTCCACTCTGCCTTGAAGATTGGCGAACTTGCCCAGGGCTCTCCTGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 90 bp | GTACTGTCTGTCTTCGATTGCTACCACGTACAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGGTTTCAACCACTTGTCCCTGGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: VLSVFDCYHVQSCPV*KHKPSRFQPLVPGK Trigger: TTTGCCAGGGACAAGTGGTTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCAATCGAAGACAGACAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACAAAGCCTTTGGCACATTTTTGGCATTaGGCTTCATGGATATGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASILRAPAIARKATTKPLAHFWH*ASWIWS Trigger: GGACCATATCCATGAAGCCAAATGCCAAAAATGTGC...CAAAGGCTTTGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS GCA 90 bp | GAAGTCCTTGTACTGTCTGTCTTCGATTGCTACCACGTACAAAGCTaGCCGGTCTGGAAACATAAGCCCTCCAGGTTTCAACCACTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: EVLVLSVFDCYHVQS*PVWKHKPSRFQPLV Trigger: GACAAGTGGTTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCAATCGAAGACAGACAGTACAAGGACTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | CAACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGGTGGGCAAGTCGGGGTTCAGCAGCTaGGACATCTTGCCCCGTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QLCPLSCICMHIQMLVGKSGFSS*DILPRP Trigger: TGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCGA...CTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | GCTTCCATCCTCAGAGCCCCAGCCATAGCACGGAAGGCAACAACAAAGCCTTTGAGTACCACTTTGTCCTaGAACACATGCTTATTATGG | + |
|
Preference number: 5 (lower is better) Translates to: ASILRAPAIARKATTKPLSTTLS*NTCLLW Trigger: CCATAATAAGCATGTGTTCAAGGACAAAGTGGTACT...CAAAGGCTTTGTTGTTGCCTTCCGTGCTATGGCTGGGGCTCTGAGGATGGAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS TCA 90 bp | CACCTCGTCTTTCAACATTTCCTCGTGGATCCCAAAGTGAGCGTATaGGTCGAAATAGTAATCTCTCGATGTCATCTCCTCGGGGTTCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLVFQHFLVDPKVSV*VEIVISRCHLLGVQ Trigger: CTGAACCCCGAGGAGATGACATCGAGAGATTACTATTTCGACTCATACGCTCACTTTGGGATCCACGAGGAAATGTTGAAAGACGAGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | AACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGGTGGGCAAGTATCCCAAACACCTTCTaGGCCCCTGCTTTGGCGGCA | + |
|
Preference number: 5 (lower is better) Translates to: NYAHLVVYACIYRCWWASIPNTF*APALAA Trigger: TGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGAT...ACTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | CAACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGGTGGGCAAGGGCATTGGTCACCACTaGCTTTGGGTCCACGATGTC | + |
|
Preference number: 5 (lower is better) Translates to: QLCPLSCICMHIQMLVGKGIGHH*LWVHDV Trigger: GACATCGTGGACCCAAAGCAAGTGGTGACCAATGCC...CTTGCCCACCAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | AATCTGGCTTATGCTATCAAAGACACTATGTCTCCAGGTTCTAGCGGAAGTAACCCAGGTTTCAACCACTaGTCCCTGGCAAAGATCACG | + |
|
Preference number: 5 (lower is better) Translates to: NLAYAIKDTMSPGSSGSNPGFNH*SLAKIT Trigger: CGTGATCTTTGCCAGGGACAAGTGGTTGAAACCTGG...GTTACTTCCGCTAGAACCTGGAGACATAGTGTCTTTGATAGCATAAGCCAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | CTCCAGGTTCTAGCGGAAGTAACCTGTCCTAGATGTCTGCAGCATGCAAAACTTAGGTCTCGCACATTTTaGGCATTTGGCTTCATGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LQVLAEVTCPRCLQHAKLRSRTF*AFGFMD Trigger: ATCCATGAAGCCAAATGCCAAAAATGTGCGAGACCT...AAGTTTTGCATGCTGCAGACATCTAGGACAGGTTACTTCCGCTAGAACCTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | TCAGAGCCACAGTCTAGTCAGAACGAGACCAGAGCTAGTCCACAGAATGTTTCATGGATTTTGAAGTCCTaGTACTGTCTGTCTTCGATT | + |
|
Preference number: 5 (lower is better) Translates to: SEPQSSQNETRASPQNVSWILKS*YCLSSI Trigger: AATCGAAGACAGACAGTACAAGGACTTCAAAATCCA...TGAAACATTCTGTGGACTAGCTCTGGTCTCGTTCTGACTAGACTGTGGCTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | ATGAACACCCAACTATGCCCACTTAGTTGTATATGCATGCATATACAGATGTTGACTGTCTGTCTTCGATaGCTACCACGTACAAAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: MNTQLCPLSCICMHIQMLTVCLR*LPRTKL Trigger: CAGCTTTGTACGTGGTAGCAATCGAAGACAGACAGT...CAACATCTGTATATGCATGCATATACAACTAAGTGGGCATAGTTGGGTGTTCAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | TATATATGCTGTACACACACACACTGGCACACGCACACACATACACTCTCACACGAAAAACCCATTTTCTaGTGGCACTTGGTAAATTCA | + |
|
Preference number: 5 (lower is better) Translates to: YICCTHTHWHTHTHTLSHEKPIF*WHLVNS Trigger: TGAATTTACCAAGTGCCACAAGAAAATGGGTTTTTC...GTGTGAGAGTGTATGTGTGTGCGTGTGCCAGTGTGTGTGTGTACAGCATATATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS-3UTR CAA 90 bp | TACACTCTCACACAAACCACCACACAGACAGAAAATCTGGCTTATGCTATCAAATTTATTAAACAGGCATaGGTCACCACTTGCTTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: YTLTQTTTQTENLAYAIKFIKQA*VTTCFG Trigger: CCCAAAGCAAGTGGTGACCAATGCCTGTTTAATAAA...TTTGATAGCATAAGCCAGATTTTCTGTCTGTGTGGTGGTTTGTGTGAGAGTGTA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS GCA 72 bp | ATGTCATCTCCTCGGGGTTCAGCAGCTTGGACATCTTaGCCCGTCCAGGGCAGCTGGGCTGTGTGGATACAT | + |
|
Preference number: 6 (lower is better) Translates to: MSSPRGSAAWTS*PVQGSWAVWIH Trigger: ATGTATCCACACAGCCCAGCTGCCCTGGACGGGGCAAGATGTCCAAGCTGCTGAACCCCGAGGAGATGACAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 72 bp | TTGCCCCGTCCAGGGCAGCTGGGCTGTGTGGATACATaGTGGACACATTGCACAGGCTTGGCTGGAATGACA | + |
|
Preference number: 6 (lower is better) Translates to: LPRPGQLGCVDT*WTHCTGLAGMT Trigger: TGTCATTCCAGCCAAGCCTGTGCAATGTGTCCACCATGTATCCACACAGCCCAGCTGCCCTGGACGGGGCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS GCA 72 bp | ACTGGAACATTCAATCCCAAACACCTTCTTGGCCCCTaGTTTGGCGGCAAACATGGAAAGGATCCCTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: TGTFNPKHLLGP*FGGKHGKDPCA Trigger: GGCACAGGGATCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGATTGAATGTTCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CAA 72 bp | GAACATTCAATCCCAAACACCTTCTTGGCCCCTGCTTaGGCGGCAAACATGGAAAGGATCCCTGTGCCACTC | + |
|
Preference number: 6 (lower is better) Translates to: EHSIPNTFLAPA*AANMERIPVPL Trigger: GAGTGGCACAGGGATCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGATTGAATGTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 72 bp | GTCTTCGATTGCTACCACGTACAAAGCTGCCCGGTCTaGAAACATAAGCCCTCCAGGTTTCAACCACTTGTC | + |
|
Preference number: 6 (lower is better) Translates to: VFDCYHVQSCPV*KHKPSRFQPLV Trigger: GACAAGTGGTTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCAATCGAAGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS TCA 72 bp | ATATGGTCCCGTAGATTTCCTCCCCTCTCCGGACAGTaGGGTAGTCTTCTAAGTAGAAGACAGTCTGCTTCC | + |
|
Preference number: 6 (lower is better) Translates to: IWSRRFPPLSGQ*GSLLSRRQSAS Trigger: GGAAGCAGACTGTCTTCTACTTAGAAGACTACCTCACTGTCCGGAGAGGGGAGGAAATCTACGGGACCATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS GCA 72 bp | GTACTGTCTGTCTTCGATTGCTACCACGTACAAAGCTaGCCGGTCTGGAAACATAAGCCCTCCAGGTTTCAA | + |
|
Preference number: 6 (lower is better) Translates to: VLSVFDCYHVQS*PVWKHKPSRFQ Trigger: TTGAAACCTGGAGGGCTTATGTTTCCAGACCGGGCAGCTTTGTACGTGGTAGCAATCGAAGACAGACAGTAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 72 bp | CAGAAATACTGGAACATTCAATCCCAAACACCTTCTTaGCCCCTGCTTTGGCGGCAAACATGGAAAGGATCC | + |
|
Preference number: 6 (lower is better) Translates to: QKYWNIQSQTPS*PLLWRQTWKGS Trigger: GGATCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGATTGAATGTTCCAGTATTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CAA 72 bp | CCTGTGCCACTCCCAACATCCAGTACCACTTTGTCCTaGAACACATGCTTATTATGGTACATGGAGTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: PVPLPTSSTTLS*NTCLLWYMEFR Trigger: CCGGAACTCCATGTACCATAATAAGCATGTGTTCAAGGACAAAGTGGTACTGGATGTTGGGAGTGGCACAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CAA 90 bp | GAAAGGATCCCTGTGCCACTCCCAACATCCAGTACCACTTTGTCCTaGAACACATGCTTATTATGGTACATGGAGTTCCGGTACGTGAGT | + |
|
Preference number: 6 (lower is better) Translates to: ERIPVPLPTSSTTLS*NTCLLWYMEFRYVS Trigger: ACTCACGTACCGGAACTCCATGTACCATAATAAGCATGTGTTCAAGGACAAAGTGGTACTGGATGTTGGGAGTGGCACAGGGATCCTTTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS TCA 72 bp | CTGTGCCACTCCCAACATCCAGTACCACTTTGTCCTTaGACACATGCTTATTATGGTACATGGAGTTCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: LCHSQHPVPLCP*THAYYGTWSSG Trigger: ACCGGAACTCCATGTACCATAATAAGCATGTGTTCAAGGACAAAGTGGTACTGGATGTTGGGAGTGGCACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CCA 72 bp | TACTGTGAAATCGAGGTCTCGCACATTTTTGGCATTTaGCTTCATGGATATGGTCCCGTAGATTTCCTCCCC | + |
|
Preference number: 6 (lower is better) Translates to: YCEIEVSHIFGI*LHGYGPVDFLP Trigger: GGGGAGGAAATCTACGGGACCATATCCATGAAGCCAAATGCCAAAAATGTGCGAGACCTCGATTTCACAGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CAA 72 bp | AGGATCCCTGTGCCACTCCCAACATCCAGTACCACTTaGTCCTTGAACACATGCTTATTATGGTACATGGAG | + |
|
Preference number: 6 (lower is better) Translates to: RIPVPLPTSSTT*SLNTCLLWYME Trigger: CTCCATGTACCATAATAAGCATGTGTTCAAGGACAAAGTGGTACTGGATGTTGGGAGTGGCACAGGGATCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS CAA 72 bp | TCAGAAATACTGGAACATTCAATCCCAAACACCTTCTaGGCCCCTGCTTTGGCGGCAAACATGGAAAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: SEILEHSIPNTF*APALAANMERI Trigger: GATCCTTTCCATGTTTGCCGCCAAAGCAGGGGCCAAGAAGGTGTTTGGGATTGAATGTTCCAGTATTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS TCA 72 bp | ACACATGCTTATTATGGTACATGGAGTTCCGGTACGTaGGTGTCCTCACCTCGTCTTTCAACATTTCCTCGT | + |
|
Preference number: 6 (lower is better) Translates to: THAYYGTWSSGT*VSSPRLSTFPR Trigger: ACGAGGAAATGTTGAAAGACGAGGTGAGGACACTCACGTACCGGAACTCCATGTACCATAATAAGCATGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||
| CDS TCA 72 bp | TTTCAACATTTCCTCGTGGATCCCAAAGTGAGCGTATaGGTCGAAATAGTAATCTCTCGATGTCATCTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: FQHFLVDPKVSV*VEIVISRCHLL Trigger: GAGGAGATGACATCGAGAGATTACTATTTCGACTCATACGCTCACTTTGGGATCCACGAGGAAATGTTGAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032500.9 |
||