Pregenerated sensors for PRMT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023110Ensembl transcript IDs: ENSMUST00000023873.12, ENSMUST00000132227.9, ENSMUST00000139964.2, ENSMUST00000147214.8
Found 170 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CGCAGCCCGGGCTCTTCCACAGCCTTCGCTTTCTCTCCTGACCCCTaGGGAGCTCTGGCGGCTGAGCATCTGCTGAGGTTGCTTCATCCA | + |
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Preference number: 1 (lower is better) Translates to: RSPGSSTAFAFSPDP*GALAAEHLLRLLHP Trigger: TGGATGAAGCAACCTCAGCAGATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGAAGAGCCCGGGCTGCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR TCA 90 bp | AGGTCTGATCGTGTCTGGGGGCCAGGCCGATTCTTAGCAGGTTCCTaGATGAACTCCCTCTTGAAACGCGGGTGGAAGACAGGCATGCAG | + |
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Preference number: 1 (lower is better) Translates to: RSDRVWGPGRFLAGS*MNSLLKRGWKTGMQ Trigger: CTGCATGCCTGTCTTCCACCCGCGTTTCAAGAGGGAGTTCATTCAGGAACCTGCTAAGAATCGGCCTGGCCCCCAGACACGATCAGACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
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| 3UTR GCA 90 bp | ACCGGGCTAGCCTTGAACTTAAAGAGATCCATCTGCCTCTGCCTCTaGCTCTGGAGTGCTGGGATAAAGAGTATGCACCACCATGCCTGG | + |
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Preference number: 1 (lower is better) Translates to: TGLALNLKRSICLCL*LWSAGIKSMHHHAW Trigger: CCAGGCATGGTGGTGCATACTCTTTATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTCAAGGCTAGCCCGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR CCA 90 bp | GAACTTAAAGAGATCCATCTGCCTCTGCCTCTGCCTCTGGAGTGCTaGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGC | + |
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Preference number: 1 (lower is better) Translates to: ELKEIHLPLPLPLEC*DKEYAPPCLAVREC Trigger: GCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR CCA 90 bp | CTAGCCTTGAACTTAAAGAGATCCATCTGCCTCTGCCTCTGCCTCTaGAGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: LALNLKRSICLCLCL*SAGIKSMHHHAWQS Trigger: GGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTCAAGGCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR CCA 90 bp | CCATCAGAGGCTGGAGTGGGGACTGCAGATAGTCTTCATAGCCTTTaGCAAAGAGCTCATAGGCATTGGGTGGAGGGCGATTTTGGCTTA | + |
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Preference number: 1 (lower is better) Translates to: PSEAGVGTADSLHSL*QRAHRHWVEGDFGL Trigger: TAAGCCAAAATCGCCCTCCACCCAATGCCTATGAGCTCTTTGCCAAAGGCTATGAAGACTATCTGCAGTCCCCACTCCAGCCTCTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR TCA 90 bp | AGAATGGCTGCTTTGATGGGCTCTCCAAGCCAGCGGTCAATGACGTaGTTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATT | + |
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Preference number: 1 (lower is better) Translates to: RMAALMGSPSQRSMT*LDGRSAPISRATAI Trigger: AATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR TCA 90 bp | GCCGCTTCAGAGTTCCTTCGGATCTTCTCCACTTTTGAGTCTGGATaGATCCATGGAGAAAGCTTTCCCACAATTAGCGTATTCCAGTCC | + |
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Preference number: 1 (lower is better) Translates to: AASEFLRIFSTFESG*IHGESFPTISVFQS Trigger: GGACTGGAATACGCTAATTGTGGGAAAGCTTTCTCCATGGATTCATCCAGACTCAAAAGTGGAGAAGATCCGAAGGAACTCTGAAGCGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
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| 3UTR CCA 90 bp | ACTGCAGATAGTCTTCATAGCCTTTGGCAAAGAGCTCATAGGCATTaGGTGGAGGGCGATTTTGGCTTAAGTATTCCAAGTACTGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: TADSLHSLWQRAHRH*VEGDFGLSIPSTGG Trigger: ACCTCCAGTACTTGGAATACTTAAGCCAAAATCGCCCTCCACCCAATGCCTATGAGCTCTTTGCCAAAGGCTATGAAGACTATCTGCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR GCA 90 bp | ATGATAAACTGCACTTCCAACTTGAGGAGCCGGAAGATCAGCCTCTaGTGCACCTTAGAAAGAACAGGAAATCCTTTCTTGTTGGTTAGG | + |
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Preference number: 1 (lower is better) Translates to: MINCTSNLRSRKISL*CTLERTGNPFLLVR Trigger: CCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTTTATCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR GCA 90 bp | ATAAACTGCACTTCCAACTTGAGGAGCCGGAAGATCAGCCTCTGCTaGACCTTAGAAAGAACAGGAAATCCTTTCTTGTTGGTTAGGAAA | + |
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Preference number: 1 (lower is better) Translates to: INCTSNLRSRKISLC*TLERTGNPFLLVRK Trigger: TTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR CAA 90 bp | TCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATCTGCTGAGGTaGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: SPDPWGALAAEHLLR*LHPELLSSHAQARG Trigger: GCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATATCTGCCTCTGCCTCTaGCTCTGGAGTGCTGGGATA | + |
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Preference number: 2 (lower is better) Translates to: STAFAFSPDPWGALAAEHICLCL*LWSAGI Trigger: TATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGAT...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGGGAACCGCTCCTCTCTaGCGGCTGAGGGTCTCACTG | + |
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Preference number: 2 (lower is better) Translates to: ASAEVASSRAAEFSCPSQGTAPL*RLRVSL Trigger: CAGTGAGACCCTCAGCCGCCAGAGAGGAGCGGTTCC...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | GAGCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCCTGGCAGTCCGGGAATaGCTACCCGTTGGCCACCAT | + |
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Preference number: 2 (lower is better) Translates to: EHLLRLLHPELLSSHAQALAVRE*LPVGHH Trigger: ATGGTGGCCAACGGGTAGGCATTCCCGGACTGCCAG...GGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR CCA 90 bp | AACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCACGCAGCTTCTCTCCTGACCCCTaGGGAGCTCTGGCGGCTGAG | + |
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Preference number: 2 (lower is better) Translates to: NNNRVGQEERRSSVHARSFSPDP*GALAAE Trigger: CTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAA...GCTGCGTGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR CCA 90 bp | AGGAAAATGCTGGTGGGGAGAATGGCTGCTTTGATGGGCTCTCCAAGCCAGCGGTGGCCAGTGTGGATGTaGTTGGTCAGAACTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RKMLVGRMAALMGSPSQRWPVWM*LVRTLA Trigger: GGCCAGAGTTCTGACCAACCACATCCACACTGGCCA...CCGCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCCCACCAGCATTTTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR CAA 90 bp | ATGCAGAGGAAATCAAACCCCCTGCAGGGGACTAGTCTGCCCTCCTaGTTTCCCAAATTTGGATCCCGCATTCCTCTGGCGGAAGTCCGG | + |
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Preference number: 2 (lower is better) Translates to: MQRKSNPLQGTSLPS*FPKFGSRIPLAEVR Trigger: CCGGACTTCCGCCAGAGGAATGCGGGATCCAAATTTGGGAAACAAGGAGGGCAGACTAGTCCCCTGCAGGGGGTTTGATTTCCTCTGCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCAGACACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGCTTCGCTTTCTCTCCTaGCCCCTGGGGAGCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: SFRHKPPKQQQSRARRAQLRFLS*PLGSSG Trigger: GCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAG...CTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGTGTCTGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGATCCATCTGCCTCTaGCTCTGCCTCTGGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: ASAEVASSRAAEFSCPSQRSICL*LCLWSA Trigger: AGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCT...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | TTTGATGGGCTCTCCAAGCCAGCGGTCAATGACGTGATTAGACGGGAGGTCAGCGGTGGGGAGAATGGCTaGTTTGATGGGCTCTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FDGLSKPAVNDVIRREVSGGENG*FDGLSK Trigger: CTTGGAGAGCCCATCAAAGCAGCCATTCTCCCCACC...GCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR CCA 90 bp | GAAAATGCTGGTGGGGAGAATGGCTGCTTTGATGGGCTCTCCAAGCCAGCGGTCGAGTGGTGGCCAGTGTaGATGTGGTTGGTCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: ENAGGENGCFDGLSKPAVEWWPV*MWLVRT Trigger: AGTTCTGACCAACCACATCCACACTGGCCACCACTC...GACCGCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCCCACCAGCATTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR CCA 90 bp | TTTGATGGGCTCTCCAAGCCAGCGGTCAATGACGTGATTAGACGGGAGGTCAGCGAGTGGTGGCCAGTGTaGATGTGGTTGGTCAGAACT | + |
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Preference number: 2 (lower is better) Translates to: FDGLSKPAVNDVIRREVSEWWPV*MWLVRT Trigger: AGTTCTGACCAACCACATCCACACTGGCCACCACTC...GCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATCAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | CACATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATGGCCAGTGTGGATGTaGTTGGTCAGAACTCTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HIHVFSSPLYSSVCVVGAWPVWM*LVRTLA Trigger: GGCCAGAGTTCTGACCAACCACATCCACACTGGCCA...TGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | TTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCAGAACAAACATGGAAGAGTGGTaGCCAGTGTGGATGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: LHHLSGPLGPPRVPSSRTNMEEW*PVWMWL Trigger: CAACCACATCCACACTGGCCACCACTCTTCCATGTT...TGTTCTGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | CACATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCAAGGTCTGATCGTGTCTaGGGGCCAGGCCGATTCTTA | + |
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Preference number: 2 (lower is better) Translates to: HIHVFSSPLYSSVCVVGARSDRV*GPGRFL Trigger: TAAGAATCGGCCTGGCCCCCAGACACGATCAGACCT...TGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGATGTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
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| 3UTR-3UTR TCA 90 bp | CACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCATTCATCCAGAGCTGCTaGGTTCTCATGCCCAAGCCA | + |
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Preference number: 2 (lower is better) Translates to: HPNNNRVGQEERRSSVHAFIQSC*VLMPKP Trigger: TGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAA...TGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR TCA 90 bp | TCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCTCAATTACATCAGGAGAATGGCTGCTTTaGTGGGCTCTCCAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: SSPLYSSVCVVGAFSITSGEWLL*WALQAS Trigger: GCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCC...TGATGTAATTGAGAATGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR TCA 90 bp | GATGGGCTCTCCAAGCCAGCGGTCAATGACGTGATTAGACGGGAGGTCAGCTCCACTTTTGAGTCTGGATaGATCCATGGAGAAAGCTTT | + |
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Preference number: 2 (lower is better) Translates to: DGLSKPAVNDVIRREVSSTFESG*IHGESF Trigger: AAAGCTTTCTCCATGGATTCATCCAGACTCAAAAGT...GGAGCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAATCCTTTCTTGTTGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCTTTGCAGCGGTCAATGACGTaGTTAGACGGGAGGTCAGCT | + |
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Preference number: 2 (lower is better) Translates to: GNPFLLVRKMLVGRMAALQRSMT*LDGRSA Trigger: AGCTGACCTCCCGTCTAATCACGTCATTGACCGCTG...CAAAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR GCA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTAAGAGAACTCAGAGCTaGTTCCAAGGTTTTGACACT | + |
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Preference number: 2 (lower is better) Translates to: HAQARGSEDCCWLVSSSSKRTQS*FQGFDT Trigger: AGTGTCAAAACCTTGGAAGCAGCTCTGAGTTCTCTT...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | CACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCATTAAAGAGATCCATCTaGCTCTGCCTCTGCCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: HPNNNRVGQEERRSSVHALKRSI*LCLCLW Trigger: CCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAA...TGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | AAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCAGGCTCTGAAGACTGCTaGTGGCTTGTGTCCTCTAGT | + |
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Preference number: 2 (lower is better) Translates to: KPPKQQQSRARRAQVKCSGSEDC*WLVSSS Trigger: ACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCC...TGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR-3UTR GCA 90 bp | CTCAATTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCATGGAAGACCCAGATATaGCCCAAAATTCAACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LNYIISQVLWGHQGYPHPWKTQI*PKIQLL Trigger: CAGGAGTTGAATTTTGGGGCATATCTGGGTCTTCCA...TGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAATTGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR GCA 90 bp | TTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCAGAACATGGAAGACCCAGATATaGCCCAAAATTCAACTCCTG | + |
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Preference number: 2 (lower is better) Translates to: LHHLSGPLGPPRVPSSRTWKTQI*PKIQLL Trigger: CAGGAGTTGAATTTTGGGGCATATCTGGGTCTTCCA...TGTTCTGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | TTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCAGAACAGGTTGGTCAGAACTCTaGCCAGATTCGTGTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: LHHLSGPLGPPRVPSSRTGWSEL*PDSCYL Trigger: AAGATAACACGAATCTGGCCAGAGTTCTGACCAACC...TGTTCTGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | CACATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCAAACATGGAAGAGTGGTaGCCAGTGTGGATGTGGTTG | + |
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Preference number: 2 (lower is better) Translates to: HIHVFSSPLYSSVCVVGANMEEW*PVWMWL Trigger: CAACCACATCCACACTGGCCACCACTCTTCCATGTT...TGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGATGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | TGCAATTCTCTTGCTATAGTCACACAGAGTCCGAAAGTTATGCCACCACATCCAATCTCTCAGGTCCTCTaGGGCCACCAAGGGTACCCT | + |
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Preference number: 2 (lower is better) Translates to: CNSLAIVTQSPKVMPPHPISQVL*GHQGYP Trigger: AGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGAT...TGGATGTGGTGGCATAACTTTCGGACTCTGTGTGACTATAGCAAGAGAATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR CAA 90 bp | ATCAGCCTCTGCTGCACCTTAGAAAGAACAGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCTTTGATGGGC | + |
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Preference number: 2 (lower is better) Translates to: ISLCCTLERTGNPFL*VRKMLVGRMAALMG Trigger: GCCCATCAAAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAGGCTGAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR TCA 90 bp | AATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTACAGAACTCCTTCTCTaGGTGGTGGTTGGTTCCCGT | + |
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Preference number: 2 (lower is better) Translates to: NDVIRREVSSNFKSYCNSTELLL*VVVGSR Trigger: ACGGGAACCAACCACCACTCAGAGAAGGAGTTCTGT...AGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR GCA 90 bp | GCGGTCAATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAGAGTCCGAAAGTTATaGCACCACATCCATGTTTTC | + |
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Preference number: 2 (lower is better) Translates to: AVNDVIRREVSSNFKSYCRVRKL*HHIHVF Trigger: GAAAACATGGATGTGGTGGCATAACTTTCGGACTCT...GCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATTGACCGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | ATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCGGTTGGTCAGAACTCTaGCCAGATTCGTGTTATCTT | + |
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Preference number: 2 (lower is better) Translates to: IHVFSSPLYSSVCVVGAFGWSEL*PDSCYL Trigger: AAGATAACACGAATCTGGCCAGAGTTCTGACCAACC...GAATGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR-3UTR CCA 90 bp | GCTATAGTCACACAGAGTCCGAAAGTTATGCCACCACATCCATGTTTTCTCTTCCAGTGTGGATGTGGTTaGTCAGAACTCTGGCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: AIVTQSPKVMPPHPCFLFQCGCG*SELWPD Trigger: ATCTGGCCAGAGTTCTGACCAACCACATCCACACTG...GAAGAGAAAACATGGATGTGGTGGCATAACTTTCGGACTCTGTGTGACTATAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| 3UTR CAA 90 bp | AAGATCAGCCTCTGCTGCACCTTAGAAAGAACAGGAAATCCTTTCTaGTTGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCTTTGATG | + |
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Preference number: 2 (lower is better) Translates to: KISLCCTLERTGNPF*LVRKMLVGRMAALM Trigger: CATCAAAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAGGCTGATCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR TCA 90 bp | ATAAATAGCCTGCTGATATTGAGAGTATTTGATGGGGTCCTTTTCAAACACTTCGGAGAATGGCTGCTTTaGTGGGCTCTCCAAGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: INSLLILRVFDGVLFKHFGEWLL*WALQAS Trigger: GCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCC...GAAGTGTTTGAAAAGGACCCCATCAAATACTCTCAATATCAGCAGGCTATTTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| 3UTR-3UTR CCA 90 bp | TGCTGCACCTTAGAAAGAACAGGAAATCCTTTCTTGTTGGTTAGGAAAATGCTGCAGAACATGGAAGAGTaGTGGCCAGTGTGGATGTGG | + |
|
Preference number: 2 (lower is better) Translates to: CCTLERTGNPFLLVRKMLQNMEE*WPVWMW Trigger: CCACATCCACACTGGCCACCACTCTTCCATGTTCTG...CAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR CCA 90 bp | AATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTTGGTTAGGAAAATGCTaGTGGGGAGAATGGCTGCTT | + |
|
Preference number: 2 (lower is better) Translates to: NDVIRREVSSNFKSYCNSWLGKC*WGEWLL Trigger: AAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCA...AGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGCTACTGCAATTCTCTTGCTATAGTCACACAGAGTCCGAAAGTTATGCCACCTTCTTAGCAGGTTCCTaGATGAACTCCCTCTTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: ELLQFSCYSHTESESYATFLAGS*MNSLLK Trigger: TTTCAAGAGGGAGTTCATTCAGGAACCTGCTAAGAA...GGTGGCATAACTTTCGGACTCTGTGTGACTATAGCAAGAGAATTGCAGTAGCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR-3UTR TCA 90 bp | TGCAATTCTCTTGCTATAGTCACACAGAGTCCGAAAGTTATGCCACCACATCCAGATCTTCTCCACTTTTaGGTCTGGATGAATCCATGG | + |
|
Preference number: 2 (lower is better) Translates to: CNSLAIVTQSPKVMPPHPDLLHF*VWMNPW Trigger: CCATGGATTCATCCAGACTCAAAAGTGGAGAAGATC...TGGATGTGGTGGCATAACTTTCGGACTCTGTGTGACTATAGCAAGAGAATTGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCTCAATTACATCATCTCTTTCGTGTTATCTTCCTaGTTAAGGGGCAATAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: STVLLCVCSRGILNYIISFVLSS*LRGNRK Trigger: TTTCCTATTGCCCCTTAATCAGGAAGATAACACGAA...AGAGATGATGTAATTGAGAATGCCCCGACTACACACACAGAGGAGTACAGTGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR GCA 90 bp | AATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTCTACTGCAATTCTCTTaGTATAGTCACACAGAGTCC | + |
|
Preference number: 2 (lower is better) Translates to: NDVIRREVSSNFKSYCNSLLQFS*YSHTES Trigger: GGACTCTGTGTGACTATAGCAAGAGAATTGCAGTAG...AGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR CCA 90 bp | ATAAATAGCCTGCTGATATTGAGAGTATTTGATGGGGTCCTTTTCAAACACTTCAGAGCTCATAGGCATTaGGTGGAGGGCGATTTTGGC | + |
|
Preference number: 2 (lower is better) Translates to: INSLLILRVFDGVLFKHFRAHRH*VEGDFG Trigger: GCCAAAATCGCCCTCCACCCAATGCCTATGAGCTCT...GAAGTGTTTGAAAAGGACCCCATCAAATACTCTCAATATCAGCAGGCTATTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTCTCTTGCTATAGTCACACAGAGTCCGAAAGTTATGCCACCACATCCATGTTTCGTGTTATCTTCCTaGTTAAGGGGCAATAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: NSLAIVTQSPKVMPPHPCFVLSS*LRGNRK Trigger: TTTCCTATTGCCCCTTAATCAGGAAGATAACACGAA...ACATGGATGTGGTGGCATAACTTTCGGACTCTGTGTGACTATAGCAAGAGAATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR GCA 90 bp | GACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTCTTAATTTCAAGAGCTACTaGAATTCTCTTGCTATAGTC | + |
|
Preference number: 2 (lower is better) Translates to: DVIRREVSSNFKSYCNSLNFKSY*NSLAIV Trigger: GACTATAGCAAGAGAATTGCAGTAGCTCTTGAAATT...AAGAGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR GCA 90 bp | ATAAATAGCCTGCTGATATTGAGAGTATTTGATGGGGTCCTTTTCAAACACTTCTGTTGGTTAGGAAAATaGTGGTGGGGAGAATGGCTG | + |
|
Preference number: 2 (lower is better) Translates to: INSLLILRVFDGVLFKHFCWLGK*WWGEWL Trigger: CAGCCATTCTCCCCACCAGCATTTTCCTAACCAACA...GAAGTGTTTGAAAAGGACCCCATCAAATACTCTCAATATCAGCAGGCTATTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR CCA 72 bp | GGCTCTTCCACAGCCTTCGCTTTCTCTCCTGACCCCTaGGGAGCTCTGGCGGCTGAGCATCTGCTGAGGTTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSTAFAFSPDP*GALAAEHLLRL Trigger: CAACCTCAGCAGATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGAAGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR GCA 72 bp | CCTCTGGAGTGCTGGGATAAAGAGTATGCACCACCATaGCTGGCAGTCCGGGAATGCCTACCCGTTGGCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PLECWDKEYAPP*LAVRECLPVGH Trigger: GTGGCCAACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACTCCAGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR-3UTR CAA 90 bp | TGCCCGAAGAGACGCATTCACAAGAGGACCCCGGCCTGCACCCAGCACCATAAGAACTGCACTTCCAACTaGAGGAGCCGGAAGATCAGC | + |
|
Preference number: 3 (lower is better) Translates to: CPKRRIHKRTPACTQHHKNCTSN*RSRKIS Trigger: GCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTT...CTTATGGTGCTGGGTGCAGGCCGGGGTCCTCTTGTGAATGCGTCTCTTCGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR GCA 72 bp | TGCCCGAAGAGACGCATTCACAAGAGGACCCCGGCCTaGACCCAGCACCATAAGTACCTGGACATTGGTCTC | + |
|
Preference number: 3 (lower is better) Translates to: CPKRRIHKRTPA*TQHHKYLDIGL Trigger: GAGACCAATGTCCAGGTACTTATGGTGCTGGGTGCAGGCCGGGGTCCTCTTGTGAATGCGTCTCTTCGGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR TCA 72 bp | CGTGTCTGGGGGCCAGGCCGATTCTTAGCAGGTTCCTaGATGAACTCCCTCTTGAAACGCGGGTGGAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: RVWGPGRFLAGS*MNSLLKRGWKT Trigger: TGTCTTCCACCCGCGTTTCAAGAGGGAGTTCATTCAGGAACCTGCTAAGAATCGGCCTGGCCCCCAGACACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR CCA 72 bp | ACCAAGGGTACCCTCATCCAGAACATGGAAGAGTGGTaGCCAGTGTGGATGTGGTTGGTCAGAACTCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: TKGTLIQNMEEW*PVWMWLVRTLA Trigger: GGCCAGAGTTCTGACCAACCACATCCACACTGGCCACCACTCTTCCATGTTCTGGATGAGGGTACCCTTGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAATTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCACCAGTGTGGATGTGGTaGGTCAGAACTCTGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LNYIISQVLWGHQGYPHPPVWMW*VRTLAR Trigger: TCTGGCCAGAGTTCTGACCAACCACATCCACACTGG...TGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAATTGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGATGATAAACTGCACTTCCAACTTGAGGAGCCGGAAGATCAGCCTCTGCTGCGGGAGAATGGCTGCTTaGATGGGCTCTCCAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VMINCTSNLRSRKISLCCGRMAA*MGSPSQ Trigger: CTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCC...GCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTTTATCATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCGGGAGAATGGCTGCTTaGATGGGCTCTCCAAGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PHPCFLFSTVLLCVCSRGGRMAA*MGSPSQ Trigger: CTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCC...GCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGATGTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR TCA 72 bp | GCTTTGATGGGCTCTCCAAGCCAGCGGTCAATGACGTaGTTAGACGGGAGGTCAGCTCCAATTTCAAGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: ALMGSPSQRSMT*LDGRSAPISRA Trigger: AGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATCAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR GCA 72 bp | GGGCTAGCCTTGAACTTAAAGAGATCCATCTGCCTCTaGCTCTGCCTCTGGAGTGCTGGGATAAAGAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: GLALNLKRSICL*LCLWSAGIKSM Trigger: CATACTCTTTATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTCAAGGCTAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR CCA 72 bp | AACTTAAAGAGATCCATCTGCCTCTGCCTCTGCCTCTaGAGTGCTGGGATAAAGAGTATGCACCACCATGCC | + |
|
Preference number: 3 (lower is better) Translates to: NLKRSICLCLCL*SAGIKSMHHHA Trigger: GGCATGGTGGTGCATACTCTTTATCCCAGCACTCCAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR-3UTR CAA 90 bp | AATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTCCAGTGTGGATGTGGTaGGTCAGAACTCTGGCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: NDVIRREVSSNFKSYCNSPVWMW*VRTLAR Trigger: TCTGGCCAGAGTTCTGACCAACCACATCCACACTGG...AGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR TCA 72 bp | TTCCAAGTACTGGAGGTAGGAACAGAACTCCTTCTCTaGGTGGTGGTTGGTTCCCGTGATGATAAACTGCAC | + |
|
Preference number: 3 (lower is better) Translates to: FQVLEVGTELLL*VVVGSRDDKLH Trigger: GTGCAGTTTATCATCACGGGAACCAACCACCACTCAGAGAAGGAGTTCTGTTCCTACCTCCAGTACTTGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR TCA 72 bp | AGCCGCTTCAGAGTTCCTTCGGATCTTCTCCACTTTTaGGTCTGGATGAATCCATGGAGAAAGCTTTCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: SRFRVPSDLLHF*VWMNPWRKLSH Trigger: GTGGGAAAGCTTTCTCCATGGATTCATCCAGACTCAAAAGTGGAGAAGATCCGAAGGAACTCTGAAGCGGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR GCA 72 bp | TGCACTTCCAACTTGAGGAGCCGGAAGATCAGCCTCTaGTGCACCTTAGAAAGAACAGGAAATCCTTTCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CTSNLRSRKISL*CTLERTGNPFL Trigger: CAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR CAA 90 bp | TCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCTCAATTACATCATCTCTCCTTGTTTCCCAAATTaGGATCCCGCATTCCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: STVLLCVCSRGILNYIISPCFPN*DPAFLW Trigger: CCAGAGGAATGCGGGATCCAAATTTGGGAAACAAGG...AGAGATGATGTAATTGAGAATGCCCCGACTACACACACAGAGGAGTACAGTGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAAAATTCAACTCCTGTAACATAGCCGCTTCAGAGTTCCTTCGGATCTTCTCCACTAGTCTGCCCTCCTaGTTTCCCAAATTTGGATCC | + |
|
Preference number: 3 (lower is better) Translates to: PKFNSCNIAASEFLRIFSTSLPS*FPKFGS Trigger: GGATCCAAATTTGGGAAACAAGGAGGGCAGACTAGT...GGAGAAGATCCGAAGGAACTCTGAAGCGGCTATGTTACAGGAGTTGAATTTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR TCA 72 bp | TTGGTCAGAACTCTGGCCAGATTCGTGTTATCTTCCTaGTTAAGGGGCAATAGGAAAGCTGGAAGACCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LVRTLARFVLSS*LRGNRKAGRPR Trigger: TCTGGGTCTTCCAGCTTTCCTATTGCCCCTTAATCAGGAAGATAACACGAATCTGGCCAGAGTTCTGACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR-3UTR CAA 90 bp | GACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTCTTGGATCTTCTCCACTTTaGAGTCTGGATGAATCCATG | + |
|
Preference number: 3 (lower is better) Translates to: DVIRREVSSNFKSYCNSLGSSPL*SLDESM Trigger: CATGGATTCATCCAGACTCAAAAGTGGAGAAGATCC...AAGAGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147214.8 |
||
| 3UTR CCA 72 bp | AGTCTTCATAGCCTTTGGCAAAGAGCTCATAGGCATTaGGTGGAGGGCGATTTTGGCTTAAGTATTCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: SLHSLWQRAHRH*VEGDFGLSIPS Trigger: ACTTGGAATACTTAAGCCAAAATCGCCCTCCACCCAATGCCTATGAGCTCTTTGCCAAAGGCTATGAAGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR-3UTR CAA 90 bp | TCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCTCAATTACATCAGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTG | + |
|
Preference number: 3 (lower is better) Translates to: SSPLYSSVCVVGAFSITSGNPFL*VRKMLV Trigger: CACCAGCATTTTCCTAACCAACAAGAAAGGATTTCC...TGATGTAATTGAGAATGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR TCA 72 bp | TATTTGATGGGGTCCTTTTCAAACACTTCATATGTCTaGGATTCCAGATTGTCCATCAGAGGCTGGAGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: YLMGSFSNTSYV*DSRLSIRGWSG Trigger: CCCACTCCAGCCTCTGATGGACAATCTGGAATCTCAGACATATGAAGTGTTTGAAAAGGACCCCATCAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| CDS-3UTR GCA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATCGCTGGACACGCGGCTaGCACCAGCACCTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: STAFAFSPDPWGALAAEHRWTRG*HQHLRL Trigger: CAGTCGGAGGTGCTGGTGGCAGCCGCGTGTCCAGCG...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATAAGAGGACCCCGGCCTaGACCCAGCACCATAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: STAFAFSPDPWGALAAEHKRTPA*TQHHKY Trigger: GTACTTATGGTGCTGGGTGCAGGCCGGGGTCCTCTT...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GACCGGGCTAGCCTTGAACTTAAAGAGATCCATCTGCCTCTGCCTCTGCCTCTGTCAGGTCCCTCCCGCTaGACACGCGGCTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: DRASLELKEIHLPLPLPLSGPSR*TRGCHQ Trigger: CTGGTGGCAGCCGCGTGTCCAGCGGGAGGGACCTGA...CAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTCAAGGCTAGCCCGGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | TTACATCATCTCTCAGGTCCTCTGGGGCCACCAAGGGTACCCTCATCCAGAACACGCTGGACACGCGGCTaGCACCAGCACCTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: LHHLSGPLGPPRVPSSRTRWTRG*HQHLRL Trigger: CAGTCGGAGGTGCTGGTGGCAGCCGCGTGTCCAGCG...TGTTCTGGATGAGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGATGATGTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| 3UTR CAA 72 bp | CACCACCATGCCTGGCAGTCCGGGAATGCCTACCCGTaGGCCACCATGACATTAGGTAGGAAAGCAGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: HHHAWQSGNAYP*ATMTLGRKAAG Trigger: TCCGGCTGCTTTCCTACCTAATGTCATGGTGGCCAACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR CAA 72 bp | CCCTGGGGAGCTCTGGCGGCTGAGCATCTGCTGAGGTaGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: PWGALAAEHLLR*LHPELLSSHAQ Trigger: TTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGCTCAGCCGCCAGAGCTCCCCAGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | CACATCCATGTTTTCTCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCACGCTGGACACGCGGCTaGCACCAGCACCTCCGACTG | + |
|
Preference number: 4 (lower is better) Translates to: HIHVFSSPLYSSVCVVGARWTRG*HQHLRL Trigger: CAGTCGGAGGTGCTGGTGGCAGCCGCGTGTCCAGCG...TGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGAGAAAACATGGATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| CDS-3UTR CCA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATTTAGGAGCAGAGAGCTaGTGGAAGTTGTGCAACCGA | + |
|
Preference number: 4 (lower is better) Translates to: STAFAFSPDPWGALAAEHLGAES*WKLCNR Trigger: TCGGTTGCACAACTTCCACCAGCTCTCTGCTCCTAA...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACGGAGAATGGCTGCTTTaGTGGGCTCTCCAAGCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYGEWLL*WALQAS Trigger: GCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCC...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGGCCAGTGTGGATGTaGTTGGTCAGAACTCTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: AEVASSRAAEFSCPSQRLWPVWM*LVRTLA Trigger: GGCCAGAGTTCTGACCAACCACATCCACACTGGCCA...GAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | CATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCCGCACACAGATGTTCTaGCCTTCGTGCACCGTGATG | + |
|
Preference number: 4 (lower is better) Translates to: HPELLSSHAQARGSEDCCRTQMF*PSCTVM Trigger: CATCACGGTGCACGAAGGCCAGAACATCTGTGTGCG...GCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | CTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTAACATCCCAGGAGAGTaGGTCTCTGGGCGGATACTC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLHPELLSSHAQARGSNIPGE*VSGRIL Trigger: GAGTATCCGCCCAGAGACTCACTCTCCTGGGATGTT...AGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTGGTGGGGAGAATGGCTaGTTTGATGGGCTCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: HAQARGSEDCCWLVSSSSGGENG*FDGLSK Trigger: CTTGGAGAGCCCATCAAAGCAGCCATTCTCCCCACC...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCTCTTGAAACGCGGGTaGAAGACAGGCATGCAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYLLKRG*KTGMQR Trigger: CCTCTGCATGCCTGTCTTCCACCCGCGTTTCAAGAG...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTAGGTCTGATCGTGTCTaGGGGCCAGGCCGATTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: HAQARGSEDCCWLVSSSSRSDRV*GPGRFL Trigger: TAAGAATCGGCCTGGCCCCCAGACACGATCAGACCT...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATGGTGGAGGGCGATTTTaGCTTAAGTATTCCAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: STAFAFSPDPWGALAAEHGGGRF*LKYSKY Trigger: GTACTTGGAATACTTAAGCCAAAATCGCCCTCCACC...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | CATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCCATCAGAGGCTGGAGTaGGGACTGCAGATAGTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPELLSSHAQARGSEDCCHQRLE*GLQIVF Trigger: GAAGACTATCTGCAGTCCCCACTCCAGCCTCTGATG...GCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCGCGTCACCACAGCATTaGGGTTCTTCTCCACAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: AEVASSRAAEFSCPSQRLASPQH*GSSPQH Trigger: ATGCTGTGGAGAAGAACCCCAATGCTGTGGTGACGC...GAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | ACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCCACAGCATACAGCCTaGTCCGCCGCTCGGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: TNHPNNNRVGQEERRSSVPQHTA*SAARPV Trigger: AACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGG...AACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | GCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCCCCCATTCTTCAAACTaGCAGTTCTCTAGCGTCACC | + |
|
Preference number: 4 (lower is better) Translates to: AEVASSRAAEFSCPSQRLPHSSN*QFSSVT Trigger: GGTGACGCTAGAGAACTGGCAGTTTGAAGAATGGGG...GAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | AATGACGTGATTAGACGGGAGGTCAGCTCCAATTTCAAGAGCTACTGCAATTCTTCAGGTCCCTCCCGCTaGACACGCGGCTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: NDVIRREVSSNFKSYCNSSGPSR*TRGCHQ Trigger: CTGGTGGCAGCCGCGTGTCCAGCGGGAGGGACCTGA...AGAATTGCAGTAGCTCTTGAAATTGGAGCTGACCTCCCGTCTAATCACGTCATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000132227.9 ENSMUST00000147214.8 |
||
| CDS-3UTR CCA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTCAGAACATGGAAGAGTaGTGGCCAGTGTGGATGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAQARGSEDCCWLVSSSSQNMEE*WPVWMW Trigger: CCACATCCACACTGGCCACCACTCTTCCATGTTCTG...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGAGCTCATAGGCATTaGGTGGAGGGCGATTTTGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASAEVASSRAAEFSCPSQRAHRH*VEGDFG Trigger: GCCAAAATCGCCCTCCACCCAATGCCTATGAGCTCT...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCAGTGTGGATGTGGTTaGTCAGAACTCTGGCCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYQCGCG*SELWPD Trigger: ATCTGGCCAGAGTTCTGACCAACCACATCCACACTG...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTAACATGGAAGAGTGGTaGCCAGTGTGGATGTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: LRLLHPELLSSHAQARGSNMEEW*PVWMWL Trigger: CAACCACATCCACACTGGCCACCACTCTTCCATGTT...AGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | CTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAGACAACTGTCACCTaGCTCCCCCATTCTTCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRLLHPELLSSHAQARGSETTVT*LPHSSN Trigger: GTTTGAAGAATGGGGGAGCCAGGTGACAGTTGTCTC...AGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAGACACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGCAGCGGTCAATGACGTaGTTAGACGGGAGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFRHKPPKQQQSRARRAQQRSMT*LDGRSA Trigger: AGCTGACCTCCCGTCTAATCACGTCATTGACCGCTG...CTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGTGTCTGAAGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | AACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCACGCAGCACAGAACTCCTTCTCTaGGTGGTGGTTGGTTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: NNNRVGQEERRSSVHARSTELLL*VVVGSR Trigger: ACGGGAACCAACCACCACTCAGAGAAGGAGTTCTGT...GCTGCGTGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCGGAAGATCAGCCTCTaGTGCACCTTAGAAAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYRKISL*CTLERT Trigger: TGTTCTTTCTAAGGTGCAGCAGAGGCTGATCTTCCG...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | GAGCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCTCATCTTTCAGGAAGTaGTGTGCTCCATCCAGACAC | + |
|
Preference number: 4 (lower is better) Translates to: EHLLRLLHPELLSSHAQASSFRK*CAPSRH Trigger: GTGTCTGGATGGAGCACAGCACTTCCTGAAAGATGA...GGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | ACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTATCTCTCAGGTCCTCTaGGGCCACCAAGGGTACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TNHPNNNRVGQEERRSSVISQVL*GHQGYP Trigger: AGGGTACCCTTGGTGGCCCCAGAGGACCTGAGAGAT...AACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | TGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCCGTTTGGTTAGGAAAATGCTaGTGGGGAGAATGGCTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: WDKEYAPPCLAVRECLPVWLGKC*WGEWLL Trigger: AAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCA...AACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | TTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAAGACAGGAGAGTGAGTCTCTaGGCGGATACTCAGAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: LLHPELLSSHAQARGSEDRRVSL*ADTQSD Trigger: ATCACTCTGAGTATCCGCCCAGAGACTCACTCTCCT...GTCTTCAGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR TCA 90 bp | TTTGATGGGCTCTCCAAGCCAGCGGTCAATGACGTGATTAGACGGGAGGTCAGCGATCTTCTCCACTTTTaGGTCTGGATGAATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: FDGLSKPAVNDVIRREVSDLLHF*VWMNPW Trigger: CCATGGATTCATCCAGACTCAAAAGTGGAGAAGATC...GCTGACCTCCCGTCTAATCACGTCATTGACCGCTGGCTTGGAGAGCCCATCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| CDS-3UTR GCA 90 bp | CACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCAAGGAAATCAAACCCCTaGTTGGCCACAGCACCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: HPNNNRVGQEERRSSVHARKSNP*LATAPS Trigger: ACTGGGTGCTGTGGCCAAGCAGGGGTTTGATTTCCT...TGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR GCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGTGGAAGACCCAGATATaGCCCAAAATTCAACTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ASAEVASSRAAEFSCPSQWKTQI*PKIQLL Trigger: CAGGAGTTGAATTTTGGGGCATATCTGGGTCTTCCA...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR GCA 90 bp | TGCTGTAGGAAGAGAACTCAGAGCTGCTTCCAAGGTTTTGACACTGTGTGCAGGAGGCATCTCAAACTGTaGCTCAGGATCGCGGTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CCRKRTQSCFQGFDTVCRRHLKL*LRIAVL Trigger: AAGGACCGCGATCCTGAGGCACAGTTTGAGATGCCT...CCTGCACACAGTGTCAAAACCTTGGAAGCAGCTCTGAGTTCTCTTCCTACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | GAGCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCGGTTGGTCAGAACTCTaGCCAGATTCGTGTTATCTT | + |
|
Preference number: 4 (lower is better) Translates to: EHLLRLLHPELLSSHAQAGWSEL*PDSCYL Trigger: AAGATAACACGAATCTGGCCAGAGTTCTGACCAACC...GGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | TGCTGTAGGAAGAGAACTCAGAGCTGCTTCCAAGGTTTTGACACTGTGTGCAGGGAGTGGTGGCCAGTGTaGATGTGGTTGGTCAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: CCRKRTQSCFQGFDTVCREWWPV*MWLVRT Trigger: AGTTCTGACCAACCACATCCACACTGGCCACCACTC...CCTGCACACAGTGTCAAAACCTTGGAAGCAGCTCTGAGTTCTCTTCCTACAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CCA 90 bp | TTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAAGACTCCTTCTCTGAGTGGTaGTTGGTTCCCGTGATGATA | + |
|
Preference number: 4 (lower is better) Translates to: LLHPELLSSHAQARGSEDSFSEW*LVPVMI Trigger: TATCATCACGGGAACCAACCACCACTCAGAGAAGGA...GTCTTCAGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| 3UTR CAA 72 bp | TGGTTGGTTCCCGTGATGATAAACTGCACTTCCAACTaGAGGAGCCGGAAGATCAGCCTCTGCTGCACCTTA | + |
|
Preference number: 4 (lower is better) Translates to: WLVPVMINCTSN*RSRKISLCCTL Trigger: TAAGGTGCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTTTATCATCACGGGAACCAACCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| CDS-3UTR TCA 90 bp | GAAAATGCTGGTGGGGAGAATGGCTGCTTTGATGGGCTCTCCAAGCCAGCGGTCACTTTTGAGTCTGGATaGATCCATGGAGAAAGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ENAGGENGCFDGLSKPAVTFESG*IHGESF Trigger: AAAGCTTTCTCCATGGATTCATCCAGACTCAAAAGT...GACCGCTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCCCACCAGCATTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| CDS-3UTR GCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACAGAGTCCGAAAGTTATaGCACCACATCCATGTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYRVRKL*HHIHVF Trigger: GAAAACATGGATGTGGTGGCATAACTTTCGGACTCT...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | TGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCCGTTCTACTGCAATTCTCTTaGTATAGTCACACAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: WDKEYAPPCLAVRECLPVLLQFS*YSHTES Trigger: GGACTCTGTGTGACTATAGCAAGAGAATTGCAGTAG...AACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | ACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTATGTTCTGGCCTTCGTaGACCGTGATGGGCTGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TNHPNNNRVGQEERRSSVMFWPS*TVMGCL Trigger: TAAGCAGCCCATCACGGTGCACGAAGGCCAGAACAT...AACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGTCTTCATAGCCTTTaGCAAAGAGCTCATAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ASAEVASSRAAEFSCPSQSLHSL*QRAHRH Trigger: ATGCCTATGAGCTCTTTGCCAAAGGCTATGAAGACT...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | TCTTCTCCACTGTACTCCTCTGTGTGTGTAGTCGGGGCATTCTCAATTACATCAATTCCAGTCCCTGCTTaGCCACAGCACCCAGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSPLYSSVCVVGAFSITSIPVPA*PQHPVC Trigger: ACACACTGGGTGCTGTGGCCAAGCAGGGACTGGAAT...TGATGTAATTGAGAATGCCCCGACTACACACACAGAGGAGTACAGTGGAGAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| CDS-3UTR TCA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACTTCGTGTTATCTTCCTaGTTAAGGGGCAATAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYFVLSS*LRGNRK Trigger: TTTCCTATTGCCCCTTAATCAGGAAGATAACACGAA...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | TGCTGTAGGAAGAGAACTCAGAGCTGCTTCCAAGGTTTTGACACTGTGTGCAGGAGTCTCAAAGTAGCCTaGGAAGCCATGAAGCACTGT | + |
|
Preference number: 4 (lower is better) Translates to: CCRKRTQSCFQGFDTVCRSLKVA*EAMKHC Trigger: ACAGTGCTTCATGGCTTCGCAGGCTACTTTGAGACT...CCTGCACACAGTGTCAAAACCTTGGAAGCAGCTCTGAGTTCTCTTCCTACAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | ATATTGAGAGTATTTGATGGGGTCCTTTTCAAACACTTCATATGTCTGAGATTCTCAGGTCCCTCCCGCTaGACACGCGGCTGCCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILRVFDGVLFKHFICLRFSGPSR*TRGCHQ Trigger: CTGGTGGCAGCCGCGTGTCCAGCGGGAGGGACCTGA...GAATCTCAGACATATGAAGTGTTTGAAAAGGACCCCATCAAATACTCTCAATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| CDS-3UTR CCA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTGAAATCCTTTCTTGTTaGTTAGGAAAATGCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HAQARGSEDCCWLVSSSSEILSC*LGKCWW Trigger: CCACCAGCATTTTCCTAACCAACAAGAAAGGATTTC...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | AACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCACGCAGCTTCTTAGCAGGTTCCTaGATGAACTCCCTCTTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: NNNRVGQEERRSSVHARSFLAGS*MNSLLK Trigger: TTTCAAGAGGGAGTTCATTCAGGAACCTGCTAAGAA...GCTGCGTGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | TCCTTCAGACACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGATCTTCTCCACTTTTaGGTCTGGATGAATCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SFRHKPPKQQQSRARRAQDLLHF*VWMNPW Trigger: CCATGGATTCATCCAGACTCAAAAGTGGAGAAGATC...CTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGTGTCTGAAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR TCA 90 bp | GCATCTGCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGGATATTGAGAGTATTTaGTGGGGTCCTTTTCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ASAEVASSRAAEFSCPSQDIESI*WGPFQT Trigger: TGTTTGAAAAGGACCCCATCAAATACTCTCAATATC...CTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGCAGATGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | AAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGTTGGTTAGGAAAATaGTGGTGGGGAGAATGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPPKQQQSRARRAQVKCSCWLGK*WWGEWL Trigger: CAGCCATTCTCCCCACCAGCATTTTCCTAACCAACA...TGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | ACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCTTTCTTGGAATTGCTaGATCGCCAGAAACGCACAC | + |
|
Preference number: 4 (lower is better) Translates to: TNHPNNNRVGQEERRSSVLSWNC*IARNAH Trigger: GTGTGCGTTTCTGGCGATGCAGCAATTCCAAGAAAG...AACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR GCA 90 bp | GGAACTGAACCAGCAGATGTTCTACACCTTCTGTGCTGTAGGAAGAGAACTCAGACACTTTCTTGGAATTaGTGCATCGCCAGAAACGCA | + |
|
Preference number: 4 (lower is better) Translates to: GTEPADVLHLLCCRKRTQTLSWN*CIARNA Trigger: TGCGTTTCTGGCGATGCAGCAATTCCAAGAAAGTGT...CTGAGTTCTCTTCCTACAGCACAGAAGGTGTAGAACATCTGCTGGTTCAGTTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| CDS-3UTR CCA 90 bp | GGAACTGAACCAGCAGATGTTCTACACCTTCTGTGCTGTAGGAAGAGAACTCAGAGCACCATAAGTACCTaGACATTGGTCTCCTTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTEPADVLHLLCCRKRTQSTIST*TLVSFS Trigger: AGAAAAGGAGACCAATGTCCAGGTACTTATGGTGCT...CTGAGTTCTCTTCCTACAGCACAGAAGGTGTAGAACATCTGCTGGTTCAGTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
||
| 3UTR CAA 72 bp | TGCTGCACCTTAGAAAGAACAGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CCTLERTGNPFL*VRKMLVGRMAA Trigger: AGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| 3UTR CAA 72 bp | CTCTGCTGCACCTTAGAAAGAACAGGAAATCCTTTCTaGTTGGTTAGGAAAATGCTGGTGGGGAGAATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LCCTLERTGNPF*LVRKMLVGRMA Trigger: AGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGGTGCAGCAGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
||
| CDS-3UTR TCA 90 bp | GGAACTGAACCAGCAGATGTTCTACACCTTCTGTGCTGTAGGAAGAGAACTCAGACTTTTGAGTCTGGATaGATCCATGGAGAAAGCTTT | + |
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Preference number: 4 (lower is better) Translates to: GTEPADVLHLLCCRKRTQTFESG*IHGESF Trigger: AAAGCTTTCTCCATGGATTCATCCAGACTCAAAAGT...CTGAGTTCTCTTCCTACAGCACAGAAGGTGTAGAACATCTGCTGGTTCAGTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR GCA 90 bp | GGAACTGAACCAGCAGATGTTCTACACCTTCTGTGCTGTAGGAAGAGAACTCAGAATTTCAAGAGCTACTaGAATTCTCTTGCTATAGTC | + |
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Preference number: 4 (lower is better) Translates to: GTEPADVLHLLCCRKRTQNFKSY*NSLAIV Trigger: GACTATAGCAAGAGAATTGCAGTAGCTCTTGAAATT...CTGAGTTCTCTTCCTACAGCACAGAAGGTGTAGAACATCTGCTGGTTCAGTTCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS GCA 90 bp | CTTCTCCACAGCATACAGCCTGATCCGCCGCTCGGCCTGTTTGGCTaGCCGAAGAGACGCATTCACAAGAGGACCCCGGCCTGCACCCAG | + |
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Preference number: 5 (lower is better) Translates to: LLHSIQPDPPLGLFG*PKRRIHKRTPACTQ Trigger: CTGGGTGCAGGCCGGGGTCCTCTTGTGAATGCGTCTCTTCGGGCAGCCAAACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGGAGAAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS TCA 90 bp | CTAGCGTCACCACAGCATTGGGGTTCTTCTCCACAGCATACAGCCTaGTCCGCCGCTCGGCCTGTTTGGCTGCCCGAAGAGACGCATTCA | + |
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Preference number: 5 (lower is better) Translates to: LASPQHWGSSPQHTA*SAARPVWLPEETHS Trigger: TGAATGCGTCTCTTCGGGCAGCCAAACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGGAGAAGAACCCCAATGCTGTGGTGACGCTAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS-3UTR CAA 90 bp | CATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCAGCGTCACCACAGCATaGGGGTTCTTCTCCACAGCA | + |
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Preference number: 5 (lower is better) Translates to: HPELLSSHAQARGSEDCCSVTTA*GFFSTA Trigger: TGCTGTGGAGAAGAACCCCAATGCTGTGGTGACGCT...GCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS GCA 90 bp | CTGTTTGGCTGCCCGAAGAGACGCATTCACAAGAGGACCCCGGCCTaGACCCAGCACCATAAGTACCTGGACATTGGTCTCCTTTTCTTC | + |
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Preference number: 5 (lower is better) Translates to: LFGCPKRRIHKRTPA*TQHHKYLDIGLLFF Trigger: GAAGAAAAGGAGACCAATGTCCAGGTACTTATGGTGCTGGGTGCAGGCCGGGGTCCTCTTGTGAATGCGTCTCTTCGGGCAGCCAAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS CCA 90 bp | TCCGGAGCCACCCATTCCCGCATGTCTGATGAGACAACTGTCACCTaGCTCCCCCATTCTTCAAACTGCCAGTTCTCTAGCGTCACCACA | + |
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Preference number: 5 (lower is better) Translates to: SGATHSRMSDETTVT*LPHSSNCQFSSVTT Trigger: TGTGGTGACGCTAGAGAACTGGCAGTTTGAAGAATGGGGGAGCCAGGTGACAGTTGTCTCATCAGACATGCGGGAATGGGTGGCTCCGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | TGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCCGTTAAATCAAACCCCTGCTaGGCCACAGCACCCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: WDKEYAPPCLAVRECLPVKSNPC*ATAPSV Trigger: CACACTGGGTGCTGTGGCCAAGCAGGGGTTTGATTT...AACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | TCCACAGCCTTCGCTTTCTCTCCTGACCCCTGGGGAGCTCTGGCGGCTGAGCATGGATCTTCTCCACTTTaGAGTCTGGATGAATCCATG | + |
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Preference number: 5 (lower is better) Translates to: STAFAFSPDPWGALAAEHGSSPL*SLDESM Trigger: CATGGATTCATCCAGACTCAAAAGTGGAGAAGATCC...ATGCTCAGCCGCCAGAGCTCCCCAGGGGTCAGGAGAGAAAGCGAAGGCTGTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | AGTGCTGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCCAGTGTGGATGTGGTaGGTCAGAACTCTGGCCAGA | + |
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Preference number: 5 (lower is better) Translates to: SAGIKSMHHHAWQSGNAYPVWMW*VRTLAR Trigger: TCTGGCCAGAGTTCTGACCAACCACATCCACACTGG...GTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCAGCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | AACAACAACAGAGTAGGGCAAGAAGAGCGCAGGTCAAGTGTTCATGCACGCAGCGGGAGAATGGCTGCTTaGATGGGCTCTCCAAGCCAG | + |
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Preference number: 5 (lower is better) Translates to: NNNRVGQEERRSSVHARSGRMAA*MGSPSQ Trigger: CTGGCTTGGAGAGCCCATCAAAGCAGCCATTCTCCC...GCTGCGTGCATGAACACTTGACCTGCGCTCTTCTTGCCCTACTCTGTTGTTGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | CTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCTCACACTTTCTTGGAATaGCTGCATCGCCAGAAACGC | + |
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Preference number: 5 (lower is better) Translates to: LRLLHPELLSSHAQARGSHTFLE*LHRQKR Trigger: GCGTTTCTGGCGATGCAGCAATTCCAAGAAAGTGTG...AGAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | GACCGGGCTAGCCTTGAACTTAAAGAGATCCATCTGCCTCTGCCTCTGCCTCTGTTCTCTGAGTGGTGGTaGGTTCCCGTGATGATAAAC | + |
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Preference number: 5 (lower is better) Translates to: DRASLELKEIHLPLPLPLFSEWW*VPVMIN Trigger: GTTTATCATCACGGGAACCAACCACCACTCAGAGAA...CAGAGGCAGAGGCAGAGGCAGATGGATCTCTTTAAGTTCAAGGCTAGCCCGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | CATGCCCAAGCCAGAGGCTCTGAAGACTGCTGCTGGCTTGTGTCCTCTAGTTCTATCATAGGATCTCGGTaGGGATGGCTGAAGGTAAAG | + |
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Preference number: 5 (lower is better) Translates to: HAQARGSEDCCWLVSSSSIIGSR*GWLKVK Trigger: CTTTACCTTCAGCCATCCCAACCGAGATCCTATGAT...AGAACTAGAGGACACAAGCCAGCAGCAGTCTTCAGAGCCTCTGGCTTGGGCATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | ACACTTCATATGTCTGAGATTCCAGATTGTCCATCAGAGGCTGGAGTGGGGACTTATTCCAGTCCCTGCTaGGCCACAGCACCCAGTGTG | + |
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Preference number: 5 (lower is better) Translates to: TLHMSEIPDCPSEAGVGTYSSPC*ATAPSV Trigger: CACACTGGGTGCTGTGGCCAAGCAGGGACTGGAATA...AGTCCCCACTCCAGCCTCTGATGGACAATCTGGAATCTCAGACATATGAAGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| CDS GCA 90 bp | ATGTCTGATGAGACAACTGTCACCTGGCTCCCCCATTCTTCAAACTaGCAGTTCTCTAGCGTCACCACAGCATTGGGGTTCTTCTCCACA | + |
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Preference number: 5 (lower is better) Translates to: MSDETTVTWLPHSSN*QFSSVTTALGFFST Trigger: TGTGGAGAAGAACCCCAATGCTGTGGTGACGCTAGAGAACTGGCAGTTTGAAGAATGGGGGAGCCAGGTGACAGTTGTCTCATCAGACAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | TCCTTCAGACACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGAACTGCACTTCCAACTaGAGGAGCCGGAAGATCAGC | + |
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Preference number: 5 (lower is better) Translates to: SFRHKPPKQQQSRARRAQNCTSN*RSRKIS Trigger: GCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTT...CTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGTGTCTGAAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | GCTGAGGTTGCTTCATCCAGAGCTGCTGAGTTCTCATGCCCAAGCCAGAGGCTCAATAGCCTGCTGATATaGAGAGTATTTGATGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AEVASSRAAEFSCPSQRLNSLLI*RVFDGV Trigger: GACCCCATCAAATACTCTCAATATCAGCAGGCTATT...GAGCCTCTGGCTTGGGCATGAGAACTCAGCAGCTCTGGATGAAGCAACCTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | TGGGATAAAGAGTATGCACCACCATGCCTGGCAGTCCGGGAATGCCTACCCGTTGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTG | + |
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Preference number: 5 (lower is better) Translates to: WDKEYAPPCLAVRECLPVGNPFL*VRKMLV Trigger: CACCAGCATTTTCCTAACCAACAAGAAAGGATTTCC...AACGGGTAGGCATTCCCGGACTGCCAGGCATGGTGGTGCATACTCTTTATCCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | TCCTTCAGACACAAACCACCCAAACAACAACAGAGTAGGGCAAGAAGAGCGCAGTCGTACCACACTTTCTaGGAATTGCTGCATCGCCAG | + |
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Preference number: 5 (lower is better) Translates to: SFRHKPPKQQQSRARRAQSYHTF*ELLHRQ Trigger: CTGGCGATGCAGCAATTCCAAGAAAGTGTGGTACGA...CTGCGCTCTTCTTGCCCTACTCTGTTGTTGTTTGGGTGGTTTGTGTCTGAAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS-3UTR CAA 90 bp | AAACTGCACTTCCAACTTGAGGAGCCGGAAGATCAGCCTCTGCTGCACCTTAGAGGATCTTCTCCACTTTaGAGTCTGGATGAATCCATG | + |
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Preference number: 5 (lower is better) Translates to: KLHFQLEEPEDQPLLHLRGSSPL*SLDESM Trigger: CATGGATTCATCCAGACTCAAAAGTGGAGAAGATCC...TCTAAGGTGCAGCAGAGGCTGATCTTCCGGCTCCTCAAGTTGGAAGTGCAGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000132227.9 |
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| CDS CCA 72 bp | CAGCTATTTCGGGGACGCAATTCAGGTCCCTCCCGCTaGACACGCGGCTGCCACCAGCACCTCCGACTGCCA | + |
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Preference number: 6 (lower is better) Translates to: QLFRGRNSGPSR*TRGCHQHLRLP Trigger: TGGCAGTCGGAGGTGCTGGTGGCAGCCGCGTGTCCAGCGGGAGGGACCTGAATTGCGTCCCCGAAATAGCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000023873.12 ENSMUST00000132227.9 ENSMUST00000147214.8 |
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| CDS CAA 90 bp | GGGTTCTTCTCCACAGCATACAGCCTGATCCGCCGCTCGGCCTGTTaGGCTGCCCGAAGAGACGCATTCACAAGAGGACCCCGGCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GFFSTAYSLIRRSAC*AARRDAFTRGPRPA Trigger: TGCAGGCCGGGGTCCTCTTGTGAATGCGTCTCTTCGGGCAGCCAAACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGGAGAAGAACCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS TCA 72 bp | CCACAGCATTGGGGTTCTTCTCCACAGCATACAGCCTaGTCCGCCGCTCGGCCTGTTTGGCTGCCCGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: PQHWGSSPQHTA*SAARPVWLPEE Trigger: CTCTTCGGGCAGCCAAACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGGAGAAGAACCCCAATGCTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS CAA 72 bp | TCCACAGCATACAGCCTGATCCGCCGCTCGGCCTGTTaGGCTGCCCGAAGAGACGCATTCACAAGAGGACCC | + |
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Preference number: 6 (lower is better) Translates to: STAYSLIRRSAC*AARRDAFTRGP Trigger: GGGTCCTCTTGTGAATGCGTCTCTTCGGGCAGCCAAACAGGCCGAGCGGCGGATCAGGCTGTATGCTGTGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS GCA 72 bp | TCTCCAGGGATGCTCACGCCATCATCTTTCAGGAAGTaGTGTGCTCCATCCAGACACTCAGGTGACAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: SPGMLTPSSFRK*CAPSRHSGDSS Trigger: CGAGCTGTCACCTGAGTGTCTGGATGGAGCACAGCACTTCCTGAAAGATGATGGCGTGAGCATCCCTGGAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS GCA 72 bp | GAGACAACTGTCACCTGGCTCCCCCATTCTTCAAACTaGCAGTTCTCTAGCGTCACCACAGCATTGGGGTTC | + |
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Preference number: 6 (lower is better) Translates to: ETTVTWLPHSSN*QFSSVTTALGF Trigger: GAACCCCAATGCTGTGGTGACGCTAGAGAACTGGCAGTTTGAAGAATGGGGGAGCCAGGTGACAGTTGTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS CAA 72 bp | TGCTGTGCTCCATCCAGACACTCAGGTGACAGCTCGTaGTCGGCAAAGGAACCCAGAAGCTCACTGACAATG | + |
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Preference number: 6 (lower is better) Translates to: CCAPSRHSGDSS*SAKEPRSSLTM Trigger: CATTGTCAGTGAGCTTCTGGGTTCCTTTGCCGACAACGAGCTGTCACCTGAGTGTCTGGATGGAGCACAGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS CCA 72 bp | ACCCATTCCCGCATGTCTGATGAGACAACTGTCACCTaGCTCCCCCATTCTTCAAACTGCCAGTTCTCTAGC | + |
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Preference number: 6 (lower is better) Translates to: THSRMSDETTVT*LPHSSNCQFSS Trigger: GCTAGAGAACTGGCAGTTTGAAGAATGGGGGAGCCAGGTGACAGTTGTCTCATCAGACATGCGGGAATGGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023873.12 |
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| CDS CAA 72 bp | TCTTCAAACTGCCAGTTCTCTAGCGTCACCACAGCATaGGGGTTCTTCTCCACAGCATACAGCCTGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: SSNCQFSSVTTA*GFFSTAYSLIR Trigger: GCGGATCAGGCTGTATGCTGTGGAGAAGAACCCCAATGCTGTGGTGACGCTAGAGAACTGGCAGTTTGAAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023873.12 ENSMUST00000139964.2 |
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| CDS CAA 90 bp | ATAAACTGCACTTCCAACTTAGAAAGAACAGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCTTTGATGGGC | + |
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Preference number: 6 (lower is better) Translates to: INCTSNLERTGNPFL*VRKMLVGRMAALMG Trigger: GCCCATCAAAGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGTTGGAAGTGCAGTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139964.2 |
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| CDS CAA 72 bp | ACTTCCAACTTAGAAAGAACAGGAAATCCTTTCTTGTaGGTTAGGAAAATGCTGGTGGGGAGAATGGCTGCT | + |
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Preference number: 6 (lower is better) Translates to: TSNLERTGNPFL*VRKMLVGRMAA Trigger: AGCAGCCATTCTCCCCACCAGCATTTTCCTAACCAACAAGAAAGGATTTCCTGTTCTTTCTAAGTTGGAAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000139964.2 |
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