Pregenerated sensors for PRMT3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030505Ensembl transcript IDs: ENSMUST00000032715.13, ENSMUST00000147401.8
Found 93 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GCCCGAGCCAAGGCAGCCTCAGCAGACAGCGCCCGCGCTTCCATGTaGTTCAACTTCTCAACAACAGATGCGCTTTCACTGAGTCCATTG | + |
|
Preference number: 1 (lower is better) Translates to: ARAKAASADSARASM*FNFSTTDALSLSPL Trigger: CAATGGACTCAGTGAAAGCGCATCTGTTGTTGAGAAGTTGAAGCACATGGAAGCGCGGGCGCTGTCTGCTGAGGCTGCCTTGGCTCGGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR CCA 90 bp | TGGCTGAAGAACACTGAAGAGGCCCAGCTGAGAGAGAGCTGCAGGTaGGTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTG | + |
|
Preference number: 1 (lower is better) Translates to: WLKNTEEAQLRESCR*VEGTAAQPLQTGCL Trigger: CAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGGGCCTCTTCAGTGTTCTTCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR GCA 90 bp | CCCATAGGAGCTGAAGTAGACGCCATCCTCATCCTCCTGCAGGTCTaGAATGGTCGTCGTGGAGGAGCAGGTTCTGACATCTACGTTCAT | + |
|
Preference number: 1 (lower is better) Translates to: PIGAEVDAILILLQV*NGRRGGAGSDIYVH Trigger: ATGAACGTAGATGTCAGAACCTGCTCCTCCACGACGACCATTGCAGACCTGCAGGAGGATGAGGATGGCGTCTACTTCAGCTCCTATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 90 bp | GTCGTGGAGGAGCAGGTTCTGACATCTACGTTCATCACAAAGTCCTaGGCAAATTGTTTCATCTTCTGCAGATCCTCACGCGCCCGAGCC | + |
|
Preference number: 1 (lower is better) Translates to: VVEEQVLTSTFITKS*ANCFIFCRSSRARA Trigger: GGCTCGGGCGCGTGAGGATCTGCAGAAGATGAAACAATTTGCTCAGGACTTTGTGATGAACGTAGATGTCAGAACCTGCTCCTCCACGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 90 bp | CATCCTCCTGCAGGTCTGCAATGGTCGTCGTGGAGGAGCAGGTTCTaGCATCTACGTTCATCACAAAGTCCTGAGCAAATTGTTTCATCT | + |
|
Preference number: 1 (lower is better) Translates to: HPPAGLQWSSWRSRF*HLRSSQSPEQIVSS Trigger: AGATGAAACAATTTGCTCAGGACTTTGTGATGAACGTAGATGTCAGAACCTGCTCCTCCACGACGACCATTGCAGACCTGCAGGAGGATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR GCA 90 bp | AGCCTGGTAGAGGATTTCAGACTGGTCGACTGCAATCACTTTCTTTaGCCCAACTTTGGCAGCAAACATGGAGAGAATTCCAGTTCCACA | + |
|
Preference number: 1 (lower is better) Translates to: SLVEDFRLVDCNHFL*PNFGSKHGENSSST Trigger: TGTGGAACTGGAATTCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATCCTCTACCAGGCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR CCA 90 bp | GGATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTaGCAGCAAACATGGAGAGAATTCCAGTTCCACACCCAACATCCA | + |
|
Preference number: 1 (lower is better) Translates to: GFQTGRLQSLSLPQL*QQTWREFQFHTQHP Trigger: TGGATGTTGGGTGTGGAACTGGAATTCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 90 bp | TCTAGAATTAGCAGACGGATACATGACCTTGGTGCAAACCTGATCTaGAAAGGCAGCATTTTAGAGAGGCAACATCTACCCCATCCTGGA | + |
|
Preference number: 1 (lower is better) Translates to: SRISRRIHDLGANLI*KGSILERQHLPHPG Trigger: TCCAGGATGGGGTAGATGTTGCCTCTCTAAAATGCTGCCTTTTCAGATCAGGTTTGCACCAAGGTCATGTATCCGTCTGCTAATTCTAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR GCA 90 bp | AAGAGTCTTGTGATCCACAACTTCCACAACAGCTTCCGGTATAACTaGTTTCTTCATGCAGGACATGTTGAAGCCATAGACGTCATCCCA | + |
|
Preference number: 1 (lower is better) Translates to: KSLVIHNFHNSFRYN*FLHAGHVEAIDVIP Trigger: TGGGATGACGTCTATGGCTTCAACATGTCCTGCATGAAGAAAGCAGTTATACCGGAAGCTGTTGTGGAAGTTGTGGATCACAAGACTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 90 bp | CAACTTCTCAACAACAGATGCGCTTTCACTGAGTCCATTGGGGTATaGGAATGGAGTAGACACAGGCTCATAAAGATCTTCTACATCAAA | + |
|
Preference number: 1 (lower is better) Translates to: QLLNNRCAFTESIGV*EWSRHRLIKIFYIK Trigger: TTTGATGTAGAAGATCTTTATGAGCCTGTGTCTACTCCATTCTCATACCCCAATGGACTCAGTGAAAGCGCATCTGTTGTTGAGAAGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR CCA 90 bp | AAGATCTTCTACATCAAACTGAAGCAAAAGGTCATCTTCCAACACTaGCTTCAGGTACTCATCTTTTTCCCAAGGCACAGGGTTATATAT | + |
|
Preference number: 1 (lower is better) Translates to: KIFYIKLKQKVIFQH*LQVLIFFPRHRVIY Trigger: ATATATAACCCTGTGCCTTGGGAAAAAGATGAGTACCTGAAGCCAGTGTTGGAAGATGACCTTTTGCTTCAGTTTGATGTAGAAGATCTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCGCAGCACAGCCTCTGCATGTGCTACAGTCCCATaGAGCCTGCCCATCCCGGTC | + |
|
Preference number: 2 (lower is better) Translates to: PAERELQVGRGDRSTASACATVP*SLPIPV Trigger: GACCGGGATGGGCAGGCTCCATGGGACTGTAGCACA...TGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR-3UTR CCA 90 bp | CAGGGCCAGGATCAGCTGTGCTACAGTCCCATGGAGCCTGCCCATCCCGGTCACGTGCTTCAGACTTTGTaGCAGCTGGAGGCCATGACT | + |
|
Preference number: 2 (lower is better) Translates to: QGQDQLCYSPMEPAHPGHVLQTL*QLEAMT Trigger: AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCAC...GTGACCGGGATGGGCAGGCTCCATGGGACTGTAGCACAGCTGATCCTGGCCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR-3UTR TCA 90 bp | GACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTCTTGGCGGGATCCTCCGCTaGGCTCTGCTTTATCTAGGC | + |
|
Preference number: 2 (lower is better) Translates to: DRSTASANRMFVHWLSSLGGILR*ALLYLG Trigger: GCCTAGATAAAGCAGAGCTCAGCGGAGGATCCCGCC...AAGACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR-3UTR GCA 90 bp | GTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTACAGACAGCTGGATGTaGTTCAGACTTTGTGGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: VEGTAAQPLQTGCLSTGSTDSWM*FRLCGS Trigger: GCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGT...AGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR-3UTR CCA 90 bp | CCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCGCAGCACAGCCTCTGCATTAAAGACAGACAGCTaGATGTGCTTCAGACTTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PAERELQVGRGDRSTASALKTDS*MCFRLC Trigger: ACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTTAA...TGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTGGCAGCAAACGAGTCCATTGGGGTATaGGAATGGAGTAGACACAGG | + |
|
Preference number: 2 (lower is better) Translates to: ISDWSTAITFFAPTLAANESIGV*EWSRHR Trigger: CCTGTGTCTACTCCATTCTCATACCCCAATGGACTC...GTTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTGGCAGCAAACCAGATGCGCTTTCACTaGGTCCATTGGGGTATGAGA | + |
|
Preference number: 2 (lower is better) Translates to: ISDWSTAITFFAPTLAANQMRFH*VHWGMR Trigger: TCTCATACCCCAATGGACTCAGTGAAAGCGCATCTG...GTTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR TCA 90 bp | AGAGGATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTGGCAGTGGAGGAGCAGGTTCTaGCATCTACGTTCATCACAA | + |
|
Preference number: 2 (lower is better) Translates to: RGFQTGRLQSLSLPQLWQWRSRF*HLRSSQ Trigger: TTGTGATGAACGTAGATGTCAGAACCTGCTCCTCCA...CTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATCCTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR GCA 90 bp | GGATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTGGCAGCAACTTCTCAACAACAGATaGGCTTTCACTGAGTCCATT | + |
|
Preference number: 2 (lower is better) Translates to: GFQTGRLQSLSLPQLWQQLLNNR*AFTESI Trigger: AATGGACTCAGTGAAAGCGCATCTGTTGTTGAGAAG...TTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR TCA 90 bp | CATAGACGTCATCCCAGAAGGCAATTCTATCGGCGTGCTTGCTCACATCACTCAGAACAACCTTATCTTTaGAGATGTGTGGATTTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: HRRHPRRQFYRRACSHHSEQPYL*RCVDFG Trigger: ACCAAAATCCACACATCTTCAAAGATAAGGTTGTTC...TGAGTGATGTGAGCAAGCACGCCGATAGAATTGCCTTCTGGGATGACGTCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CCA 90 bp | GAAGCAAAAGGTCATCTTCCAACACTGGCTTCAGGTACTCATCTTTTTCCCAAGGCACAGGGTTATATATaGAATTCATATATTCAACCG | + |
|
Preference number: 2 (lower is better) Translates to: EAKGHLPTLASGTHLFPKAQGYI*NSYIQP Trigger: CGGTTGAATATATGAATTCCATATATAACCCTGTGC...CTTGGGAAAAAGATGAGTACCTGAAGCCAGTGTTGGAAGATGACCTTTTGCTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR CCA 72 bp | AGTTGCAGGGCCAGGATCAGCTGTGCTACAGTCCCATaGAGCCTGCCCATCCCGGTCACTGCCCTATTCCGC | + |
|
Preference number: 3 (lower is better) Translates to: SCRARISCATVP*SLPIPVTALFR Trigger: GCGGAATAGGGCAGTGACCGGGATGGGCAGGCTCCATGGGACTGTAGCACAGCTGATCCTGGCCCTGCAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR GCA 72 bp | GGGCCAGGATCAGCTGTGCTACAGTCCCATGGAGCCTaGCCATCCCGGTCACTGCCCTATTCCGCTTTAAAG | + |
|
Preference number: 3 (lower is better) Translates to: GPGSAVLQSHGA*PSRSLPYSALK Trigger: CTTTAAAGCGGAATAGGGCAGTGACCGGGATGGGCAGGCTCCATGGGACTGTAGCACAGCTGATCCTGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR CCA 72 bp | AACACTGAAGAGGCCCAGCTGAGAGAGAGCTGCAGGTaGGTAGAGGGGACCGCAGCACAGCCTCTGCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: NTEEAQLRESCR*VEGTAAQPLQT Trigger: TGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGGGCCTCTTCAGTGTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR TCA 72 bp | AAGTCTCCTCAGCTAACCTGGCCAGGCAGGCTTCTGTaGCTAGGATCTCTAGGAGCAGAAGCAGGAGGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: KSPQLTWPGRLL*LGSLGAEAGGG Trigger: CCCTCCTCCTGCTTCTGCTCCTAGAGATCCTAGTCACAGAAGCCTGCCTGGCCAGGTTAGCTGAGGAGACTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR GCA 72 bp | GCTGAAGTAGACGCCATCCTCATCCTCCTGCAGGTCTaGAATGGTCGTCGTGGAGGAGCAGGTTCTGACATC | + |
|
Preference number: 3 (lower is better) Translates to: AEVDAILILLQV*NGRRGGAGSDI Trigger: GATGTCAGAACCTGCTCCTCCACGACGACCATTGCAGACCTGCAGGAGGATGAGGATGGCGTCTACTTCAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 72 bp | CGGCGTGCTTGCTCACATCACTCACAGCTACAAGGCTaGTGGTGCAAATGTCAGGGTAGACCGATCCCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RRACSHHSQLQG*WCKCQGRPIPL Trigger: AAGGGGGATCGGTCTACCCTGACATTTGCACCATCAGCCTTGTAGCTGTGAGTGATGTGAGCAAGCACGCCG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR GCA 72 bp | AAGGCAGCCTCAGCAGACAGCGCCCGCGCTTCCATGTaGTTCAACTTCTCAACAACAGATGCGCTTTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: KAASADSARASM*FNFSTTDALSL Trigger: CAGTGAAAGCGCATCTGTTGTTGAGAAGTTGAAGCACATGGAAGCGCGGGCGCTGTCTGCTGAGGCTGCCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CAA 90 bp | ACACATAGGCTACATCCTGAAGTTAGACTTCCCCACAATGCTAGGCCATGGCTGGATGTGCTTCAGACTTaGTGGCAGCTGGAGGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: THRLHPEVRLPHNARPWLDVLQT*WQLEAM Trigger: CATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATC...CAGCCATGGCCTAGCATTGTGGGGAAGTCTAACTTCAGGATGTAGCCTATGTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR TCA 72 bp | GCAGGTCTGCAATGGTCGTCGTGGAGGAGCAGGTTCTaGCATCTACGTTCATCACAAAGTCCTGAGCAAATT | + |
|
Preference number: 3 (lower is better) Translates to: AGLQWSSWRSRF*HLRSSQSPEQI Trigger: AATTTGCTCAGGACTTTGTGATGAACGTAGATGTCAGAACCTGCTCCTCCACGACGACCATTGCAGACCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 72 bp | GCATTTCTTCATGTATCCCATAATGCCCATAGGAGCTaGAGTAGACGCCATCCTCATCCTCCTGCAGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AFLHVSHNAHRS*SRRHPHPPAGL Trigger: CAGACCTGCAGGAGGATGAGGATGGCGTCTACTTCAGCTCCTATGGGCATTATGGGATACATGAAGAAATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR CCA 72 bp | ACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTaGCAGCAAACATGGAGAGAATTCCAGTTCCACACC | + |
|
Preference number: 3 (lower is better) Translates to: TGRLQSLSLPQL*QQTWREFQFHT Trigger: GGTGTGGAACTGGAATTCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 72 bp | AGCAGACGGATACATGACCTTGGTGCAAACCTGATCTaGAAAGGCAGCATTTTAGAGAGGCAACATCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: SRRIHDLGANLI*KGSILERQHLP Trigger: GGGTAGATGTTGCCTCTCTAAAATGCTGCCTTTTCAGATCAGGTTTGCACCAAGGTCATGTATCCGTCTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR GCA 72 bp | ATCCATAGCCTGGTAGAGGATTTCAGACTGGTCGACTaGAATCACTTTCTTTGCCCCAACTTTGGCAGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: IHSLVEDFRLVD*NHFLCPNFGSK Trigger: TTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATCCTCTACCAGGCTATGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CAA 90 bp | GATTTCAGACTGGTCGACTGCAATCACTTTCTTTGCCCCAACTTTGGCAGCAAACTTTCACTGAGTCCATaGGGGTATGAGAATGGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: DFRLVDCNHFLCPNFGSKLSLSP*GYENGV Trigger: TACTCCATTCTCATACCCCAATGGACTCAGTGAAAG...TTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAGTCGACCAGTCTGAAATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR GCA 72 bp | GTGATCCACAACTTCCACAACAGCTTCCGGTATAACTaGTTTCTTCATGCAGGACATGTTGAAGCCATAGAC | + |
|
Preference number: 3 (lower is better) Translates to: VIHNFHNSFRYN*FLHAGHVEAID Trigger: GTCTATGGCTTCAACATGTCCTGCATGAAGAAAGCAGTTATACCGGAAGCTGTTGTGGAAGTTGTGGATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR TCA 72 bp | AACAACAGATGCGCTTTCACTGAGTCCATTGGGGTATaGGAATGGAGTAGACACAGGCTCATAAAGATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: NNRCAFTESIGV*EWSRHRLIKIF Trigger: GAAGATCTTTATGAGCCTGTGTCTACTCCATTCTCATACCCCAATGGACTCAGTGAAAGCGCATCTGTTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR GCA 72 bp | GATGGTGCAAATGTCAGGGTAGACCGATCCCCCTTTTaGCAAGTATTTACTCTTAGCATAAAGGACAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: DGANVRVDRSPF*QVFTLSIKDRI Trigger: GATTCTGTCCTTTATGCTAAGAGTAAATACTTGGCAAAAGGGGGATCGGTCTACCCTGACATTTGCACCATC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CAA 90 bp | ATCCACTCTGATATAATAACATCCACCTTTTCCACAGGAAGACTCACTTCTTCATTCTTTGCCCCAACTTaGGCAGCAAACATGGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: IHSDIITSTFSTGRLTSSFFAPT*AANMER Trigger: TCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGAA...TGAAGAAGTGAGTCTTCCTGTGGAAAAGGTGGATGTTATTATATCAGAGTGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| 3UTR-3UTR CAA 90 bp | TCCAGAACAACCTTATCTTTGAAGATGTGTGGATTTTGGTATATGAAATCTCTGCTTTCTGTGCGTACTTaGTCCTTTAGCATTTCTTCA | + |
|
Preference number: 3 (lower is better) Translates to: SRTTLSLKMCGFWYMKSLLSVRT*SFSISS Trigger: TGAAGAAATGCTAAAGGACAAAGTACGCACAGAAAG...CAGAGATTTCATATACCAAAATCCACACATCTTCAAAGATAAGGTTGTTCTGGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147401.8 |
||
| CDS-3UTR CCA 90 bp | CCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCGCAGCACAGCCTCTGCATGTGTTTTGGTGCTCTaGGGGCCAGTAGAGAACACG | + |
|
Preference number: 4 (lower is better) Translates to: PAERELQVGRGDRSTASACVLVL*GPVENT Trigger: CGTGTTCTCTACTGGCCCCCAGAGCACCAAAACACA...TGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCAGGATCAGCTGTGCTACAGTCCCATGGAGCCTGCCCATCCCGGTCACGCAATTCTATCGGCGTaGTTGCTCACATCACTCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGQDQLCYSPMEPAHPGHAILSA*LLTSLT Trigger: TGTGAGTGATGTGAGCAAGCACGCCGATAGAATTGC...GTGACCGGGATGGGCAGGCTCCATGGGACTGTAGCACAGCTGATCCTGGCCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAGCTGCAGGTGGGTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGACAGATGCGCTTTCACTaGGTCCATTGGGGTATGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RESCRWVEGTAAQPLQTGQMRFH*VHWGMR Trigger: TCTCATACCCCAATGGACTCAGTGAAAGCGCATCTG...TCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | AAGAACACTGAAGAGGCCCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCTGGAGGAGCAGGTTCTaGCATCTACGTTCATCACAA | + |
|
Preference number: 4 (lower is better) Translates to: KNTEEAQLRESCRWVEGTWRSRF*HLRSSQ Trigger: TTGTGATGAACGTAGATGTCAGAACCTGCTCCTCCA...GGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGGGCCTCTTCAGTGTTCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | GTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTTCACAGCTACAAGGCTaGTGGTGCAAATGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: VEGTAAQPLQTGCLSTGSSQLQG*WCKCQG Trigger: ACCCTGACATTTGCACCATCAGCCTTGTAGCTGTGA...AGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | GTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTAATTGTTTCATCTTCTaGAGATCCTCACGCGCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: VEGTAAQPLQTGCLSTGSNCFIF*RSSRAR Trigger: TCGGGCGCGTGAGGATCTGCAGAAGATGAAACAATT...AGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTCCATCCTCATCCTCCTaGAGGTCTGCAATGGTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTPSSSS*RSAMVV Trigger: GACGACCATTGCAGACCTGCAGGAGGATGAGGATGG...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR CAA 72 bp | GAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTaGTCCACTGGCTCTCTAGTCTTGAGATATCCTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EGTAAQPLQTGC*STGSLVLRYPD Trigger: ATCAGGATATCTCAAGACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | GCTACAGTCCCATGGAGCCTGCCCATCCCGGTCACTGCCCTATTCCGCTTTAAACTCCAACTTACAGTGTaGAAACGTTTCCTCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATVPWSLPIPVTALFRFKLQLTV*KRFLSR Trigger: TCTGCTGAGGAAACGTTTTCACACTGTAAGTTGGAG...TTTAAAGCGGAATAGGGCAGTGACCGGGATGGGCAGGCTCCATGGGACTGTAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGGAGAGGAAGTCTCCTCAGCTAACCTGGCCAGGCAGGCTTCTGTGACTACTGTAAGTCTGGGTTaGACTGTTCAAAGTCAGGGT | + |
|
Preference number: 4 (lower is better) Translates to: LAGEEVSSANLARQASVTTVSLG*TVQSQG Trigger: ACCCTGACTTTGAACAGTTCAACCCAGACTTACAGT...AGTCACAGAAGCCTGCCTGGCCAGGTTAGCTGAGGAGACTTCCTCTCCTGCTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CCA 90 bp | GCTACAGTCCCATGGAGCCTGCCCATCCCGGTCACTGCCCTATTCCGCTTTAAATCTTTGCCCCAACTTTaGCAGCAAACATGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ATVPWSLPIPVTALFRFKSLPQL*QQTWRE Trigger: TTCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGA...TTTAAAGCGGAATAGGGCAGTGACCGGGATGGGCAGGCTCCATGGGACTGTAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | GTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTTGCAATCACTTTCTTTaGCCCAACTTTGGCAGCAAA | + |
|
Preference number: 4 (lower is better) Translates to: VEGTAAQPLQTGCLSTGSCNHFL*PNFGSK Trigger: TTTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCA...AGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | GGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTAGCTTCCGGTATAACTaGTTTCTTCATGCAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: GDRSTASANRMFVHWLSSSFRYN*FLHAGH Trigger: ATGTCCTGCATGAAGAAAGCAGTTATACCGGAAGCT...ACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | ACACATAGGCTACATCCTGAAGTTAGACTTCCCCACAATGCTAGGCCATGGCTGTCATGCAGGACATGTTaGAGCCATAGACGTCATCCC | + |
|
Preference number: 4 (lower is better) Translates to: THRLHPEVRLPHNARPWLSCRTC*SHRRHP Trigger: GGGATGACGTCTATGGCTTCAACATGTCCTGCATGA...CAGCCATGGCCTAGCATTGTGGGGAAGTCTAACTTCAGGATGTAGCCTATGTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | GTAGAGGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTGATATCACAAGGGTCTaGAATAAGAGTCTTGTGATC | + |
|
Preference number: 4 (lower is better) Translates to: VEGTAAQPLQTGCLSTGSDITRV*NKSLVI Trigger: GATCACAAGACTCTTATTTCAGACCCTTGTGATATC...AGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCCTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | CTAGCAGGAGAGGAAGTCTCCTCAGCTAACCTGGCCAGGCAGGCTTCTGTGACTCTCTGTAACTTTCTGTaGGTACTTTGTCCTTTAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAGEEVSSANLARQASVTLCNFL*VLCPLA Trigger: TGCTAAAGGACAAAGTACGCACAGAAAGTTACAGAG...AGTCACAGAAGCCTGCCTGGCCAGGTTAGCTGAGGAGACTTCCTCTCCTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTTTCTATCGGCGTGCTTaGTCACATCACTCACAGCTA | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTFYRRA*SHHSQL Trigger: TAGCTGTGAGTGATGTGAGCAAGCACGCCGATAGAA...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTGGCAGTCTATGTGCTTaGTATCACAAGGGTCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTGSLCA*YHKGLK Trigger: TTTCAGACCCTTGTGATATCAAGCACATAGACTGCC...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTGTGTGGCAGTCTATGTaGTTGATATCACAAGGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTVWQSM*LISQGS Trigger: AGACCCTTGTGATATCAAGCACATAGACTGCCACAC...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTCTTTGGCAGCAAACATaGAGAGAATTCCAGTTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTLWQQT*REFQFH Trigger: GTGGAACTGGAATTCTCTCCATGTTTGCTGCCAAAG...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CCA 90 bp | GGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTAACACGACCCTGTTGTaGCAATTCTTCTCAAAATAT | + |
|
Preference number: 4 (lower is better) Translates to: GDRSTASANRMFVHWLSSNTTLL*QFFSKY Trigger: ATATTTTGAGAAGAATTGCCACAACAGGGTCGTGTT...ACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR GCA 90 bp | AAAGACAGACAGCTGGATGTGCTTCAGACTTTGTGGCAGCTGGAGGCCATGACTCTTCTCAACAACAGATaGGCTTTCACTGAGTCCATT | + |
|
Preference number: 4 (lower is better) Translates to: KDRQLDVLQTLWQLEAMTLLNNR*AFTESI Trigger: AATGGACTCAGTGAAAGCGCATCTGTTGTTGAGAAG...AGTCATGGCCTCCAGCTGCCACAAAGTCTGAAGCACATCCAGCTGTCTGTCTTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CCA 90 bp | GGGGACCGCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTGCACAGGGTTATATATaGAATTCATATATTCAACCG | + |
|
Preference number: 4 (lower is better) Translates to: GDRSTASANRMFVHWLSSAQGYI*NSYIQP Trigger: CGGTTGAATATATGAATTCCATATATAACCCTGTGC...ACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGCGGTCCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | ACACATAGGCTACATCCTGAAGTTAGACTTCCCCACAATGCTAGGCCATGGCTGTCCTTCTTATTCTTGTaGACTGTGATCTTTCCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: THRLHPEVRLPHNARPWLSFLFL*TVIFPF Trigger: GAAAGGAAAGATCACAGTTCACAAGAATAAGAAGGA...CAGCCATGGCCTAGCATTGTGGGGAAGTCTAACTTCAGGATGTAGCCTATGTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | TTGTCCACTGGCTCTCTAGTCTTGAGATATCCTGATATTTCAGCAAAAAGTGTAGAGTCCATTGGGGTATaGGAATGGAGTAGACACAGG | + |
|
Preference number: 4 (lower is better) Translates to: LSTGSLVLRYPDISAKSVESIGV*EWSRHR Trigger: CCTGTGTCTACTCCATTCTCATACCCCAATGGACTC...TACACTTTTTGCTGAAATATCAGGATATCTCAAGACTAGAGAGCCAGTGGACAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | AGTAAGCCAATTCAAATGACTCTCAGTCTAGCAGGAGAGGAAGTCTCCTCAGCTGAACAACCTTATCTTTaGAGATGTGTGGATTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: SKPIQMTLSLAGEEVSSAEQPYL*RCVDFG Trigger: ACCAAAATCCACACATCTTCAAAGATAAGGTTGTTC...AGCTGAGGAGACTTCCTCTCCTGCTAGACTGAGAGTCATTTGAATTGGCTTACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | CTAAAAATTGTTCCTCTAGAAAGGAAATCTACAGTAAAACACTGCTTTGTGCTGAGAAAACTCCAAGTCTaGGATAGACGTGGTGTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LKIVPLERKSTVKHCFVLRKLQV*DRRGVA Trigger: TGCCACACCACGTCTATCTCAGACTTGGAGTTTTCT...CAGCACAAAGCAGTGTTTTACTGTAGATTTCCTTTCTAGAGGAACAATTTTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| 3UTR CAA 72 bp | CTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTCTaGAGATATCCTGATATTTCAGCAAAAAGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: LQTGCLSTGSLV*RYPDISAKSVT Trigger: AGTTACACTTTTTGCTGAAATATCAGGATATCTCAAGACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | TTGTCCACTGGCTCTCTAGTCTTGAGATATCCTGATATTTCAGCAAAAAGTGTAATAGCCCATCCACTCTaGTATAATAACATCCACCTT | + |
|
Preference number: 4 (lower is better) Translates to: LSTGSLVLRYPDISAKSVIAHPL*YNNIHL Trigger: AAGGTGGATGTTATTATATCAGAGTGGATGGGCTAT...TACACTTTTTGCTGAAATATCAGGATATCTCAAGACTAGAGAGCCAGTGGACAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR TCA 90 bp | ATTGTTCCTCTAGAAAGGAAATCTACAGTAAAACACTGCTTTGTGCTGCTCATTGAAATAAGAGTCTTGTaGTCCACAACTTCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: IVPLERKSTVKHCFVLLIEIRVL*STTSTT Trigger: TGTTGTGGAAGTTGTGGATCACAAGACTCTTATTTC...AATGAGCAGCACAAAGCAGTGTTTTACTGTAGATTTCCTTTCTAGAGGAACAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS GCA 90 bp | GCGAACAACCTGTCACAGAACAGGCAGGGTGTGTGCTGCCGGCCGTaGGCGGGCTCAGTGTCCGCGTCCTCGTCCTCCCAGCCCGCGTCG | + |
|
Preference number: 5 (lower is better) Translates to: ANNLSQNRQGVCCRP*AGSVSASSSSQPAS Trigger: CGACGCGGGCTGGGAGGACGAGGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAGGTTGTTCGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS GCA 90 bp | TCAGCAGAGGCGAACAACCTGTCACAGAACAGGCAGGGTGTGTGCTaGCGGCCGTGCGCGGGCTCAGTGTCCGCGTCCTCGTCCTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SAEANNLSQNRQGVC*RPCAGSVSASSSSQ Trigger: CTGGGAGGACGAGGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAGGTTGTTCGCCTCTGCTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS GCA 90 bp | TCCTCAGCAGAGGCGAACAACCTGTCACAGAACAGGCAGGGTGTGTaGTGCCGGCCGTGCGCGGGCTCAGTGTCCGCGTCCTCGTCCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SSAEANNLSQNRQGV*CRPCAGSVSASSSS Trigger: GGAGGACGAGGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAGGTTGTTCGCCTCTGCTGAGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCGCAGCACAGCCTCTGCACTGCAATCACTTTCTTaGCCCCAACTTTGGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: PAERELQVGRGDRSTASALQSLS*PQLWQQ Trigger: TTGCTGCCAAAGTTGGGGCAAAGAAAGTGATTGCAG...TGCAGAGGCTGTGCTGCGGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | AAGAACACTGAAGAGGCCCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCCTTTCACTGAGTCCATaGGGGTATGAGAATGGAGTA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEEAQLRESCRWVEGTLSLSP*GYENGV Trigger: TACTCCATTCTCATACCCCAATGGACTCAGTGAAAG...GGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGGGCCTCTTCAGTGTTCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | AGCTGTGCTACAGTCCCATGGAGCCTGCCCATCCCGGTCACTGCCCTATTCCGCAGAACAACCTTATCTTaGAAGATGTGTGGATTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SCATVPWSLPIPVTALFRRTTLS*KMCGFW Trigger: CCAAAATCCACACATCTTCAAAGATAAGGTTGTTCT...GCGGAATAGGGCAGTGACCGGGATGGGCAGGCTCCATGGGACTGTAGCACAGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGAGAGGAAGTCTCCTCAGCTAACCTGGCCAGGCAGGCTTCTGTGACTGAGAACACGACCCTGTaGTGGCAATTCTTCTCAAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAGEEVSSANLARQASVTENTTL*WQFFSK Trigger: TTTTGAGAAGAATTGCCACAACAGGGTCGTGTTCTC...AGTCACAGAAGCCTGCCTGGCCAGGTTAGCTGAGGAGACTTCCTCTCCTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | GCAGCACAGCCTCTGCAAACAGGATGTTTGTCCACTGGCTCTCTAGTCTTGAGATGTTTCCAGTGTGTTTaGGTGCTCTGGGGGCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AAQPLQTGCLSTGSLVLRCFQCV*VLWGPV Trigger: TACTGGCCCCCAGAGCACCAAAACACACTGGAAACA...TCTCAAGACTAGAGAGCCAGTGGACAAACATCCTGTTTGCAGAGGCTGTGCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | AAGAACACTGAAGAGGCCCAGCTGAGAGAGAGCTGCAGGTGGGTAGAGGGGACCCTTTCTGTGCGTACTTaGTCCTTTAGCATTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KNTEEAQLRESCRWVEGTLSVRT*SFSISS Trigger: TGAAGAAATGCTAAAGGACAAAGTACGCACAGAAAG...GGTCCCCTCTACCCACCTGCAGCTCTCTCTCAGCTGGGCCTCTTCAGTGTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | CTAGCAGGAGAGGAAGTCTCCTCAGCTAACCTGGCCAGGCAGGCTTCTGTGACTAAAGTCCTGAGCAAATaGTTTCATCTTCTGCAGATC | + |
|
Preference number: 5 (lower is better) Translates to: LAGEEVSSANLARQASVTKVLSK*FHLLQI Trigger: GATCTGCAGAAGATGAAACAATTTGCTCAGGACTTT...AGTCACAGAAGCCTGCCTGGCCAGGTTAGCTGAGGAGACTTCCTCTCCTGCTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 90 bp | GATAGACGTGGTGTGGCAGTCTATGTGCTTGATATCACAAGGGTCTaGAATAAGAGTCTTGTGATCCACAACTTCCACAACAGCTTCCGG | + |
|
Preference number: 5 (lower is better) Translates to: DRRGVAVYVLDITRV*NKSLVIHNFHNSFR Trigger: CCGGAAGCTGTTGTGGAAGTTGTGGATCACAAGACTCTTATTTCAGACCCTTGTGATATCAAGCACATAGACTGCCACACCACGTCTATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 90 bp | AAAGTCAGGGTCACAATGAGGGAACGAGGATCCTTCTTATTCTTGTaGACTGTGATCTTTCCTTTCAGAGCTTCACCTGCTTTAACCGGA | + |
|
Preference number: 5 (lower is better) Translates to: KVRVTMRERGSFLFL*TVIFPFRASPALTG Trigger: TCCGGTTAAAGCAGGTGAAGCTCTGAAAGGAAAGATCACAGTTCACAAGAATAAGAAGGATCCTCGTTCCCTCATTGTGACCCTGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 90 bp | CAGTCTATGTGCTTGATATCACAAGGGTCTGAAATAAGAGTCTTGTaGTCCACAACTTCCACAACAGCTTCCGGTATAACTGCTTTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QSMCLISQGSEIRVL*STTSTTASGITAFF Trigger: GAAGAAAGCAGTTATACCGGAAGCTGTTGTGGAAGTTGTGGATCACAAGACTCTTATTTCAGACCCTTGTGATATCAAGCACATAGACTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 90 bp | ATGGACCATACTATCAATATTAAATTGATGCTCCAACTTACAGTGTaGAAACGTTTCCTCAGCAGAGGCGAACAACCTGTCACAGAACAG | + |
|
Preference number: 5 (lower is better) Translates to: MDHTINIKLMLQLTV*KRFLSRGEQPVTEQ Trigger: CTGTTCTGTGACAGGTTGTTCGCCTCTGCTGAGGAAACGTTTTCACACTGTAAGTTGGAGCATCAATTTAATATTGATAGTATGGTCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS-3UTR CAA 90 bp | ATTGTTCCTCTAGAAAGGAAATCTACAGTAAAACACTGCTTTGTGCTGCTCATTTTCTTTGCCCCAACTTaGGCAGCAAACATGGAGAGA | + |
|
Preference number: 5 (lower is better) Translates to: IVPLERKSTVKHCFVLLIFFAPT*AANMER Trigger: TCTCTCCATGTTTGCTGCCAAAGTTGGGGCAAAGAA...AATGAGCAGCACAAAGCAGTGTTTTACTGTAGATTTCCTTTCTAGAGGAACAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS GCA 72 bp | CTGTCACAGAACAGGCAGGGTGTGTGCTGCCGGCCGTaGGCGGGCTCAGTGTCCGCGTCCTCGTCCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: LSQNRQGVCCRP*AGSVSASSSSQ Trigger: CTGGGAGGACGAGGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS GCA 72 bp | GCGAACAACCTGTCACAGAACAGGCAGGGTGTGTGCTaGCGGCCGTGCGCGGGCTCAGTGTCCGCGTCCTCG | + |
|
Preference number: 6 (lower is better) Translates to: ANNLSQNRQGVC*RPCAGSVSASS Trigger: CGAGGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAGGTTGTTCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS GCA 72 bp | GAGGCGAACAACCTGTCACAGAACAGGCAGGGTGTGTaGTGCCGGCCGTGCGCGGGCTCAGTGTCCGCGTCC | + |
|
Preference number: 6 (lower is better) Translates to: EANNLSQNRQGV*CRPCAGSVSAS Trigger: GGACGCGGACACTGAGCCCGCGCACGGCCGGCAGCACACACCCTGCCTGTTCTGTGACAGGTTGTTCGCCTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000032715.13 ENSMUST00000147401.8 |
||
| CDS TCA 72 bp | AAGTCTGGGTTGAACTGTTCAAAGTCAGGGTCACAATaGGGGAACGAGGATCCTTCTTATTCTTGTGAACTG | + |
|
Preference number: 6 (lower is better) Translates to: KSGLNCSKSGSQ*GNEDPSYSCEL Trigger: CAGTTCACAAGAATAAGAAGGATCCTCGTTCCCTCATTGTGACCCTGACTTTGAACAGTTCAACCCAGACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS CCA 72 bp | TCTGAAGAAAACTCCAAGTCTGAGATAGACGTGGTGTaGCAGTCTATGTGCTTGATATCACAAGGGTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: SEENSKSEIDVV*QSMCLISQGSE Trigger: TTCAGACCCTTGTGATATCAAGCACATAGACTGCCACACCACGTCTATCTCAGACTTGGAGTTTTCTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 72 bp | TGCTTGATATCACAAGGGTCTGAAATAAGAGTCTTGTaGTCCACAACTTCCACAACAGCTTCCGGTATAACT | + |
|
Preference number: 6 (lower is better) Translates to: CLISQGSEIRVL*STTSTTASGIT Trigger: AGTTATACCGGAAGCTGTTGTGGAAGTTGTGGATCACAAGACTCTTATTTCAGACCCTTGTGATATCAAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||
| CDS TCA 72 bp | ACTATCAATATTAAATTGATGCTCCAACTTACAGTGTaGAAACGTTTCCTCAGCAGAGGCGAACAACCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TINIKLMLQLTV*KRFLSRGEQPV Trigger: GACAGGTTGTTCGCCTCTGCTGAGGAAACGTTTTCACACTGTAAGTTGGAGCATCAATTTAATATTGATAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032715.13 |
||