RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRLR (Mus musculus)

Ensembl gene IDs: ENSMUSG00000005268

Ensembl transcript IDs: ENSMUST00000124470.8, ENSMUST00000127467.3, ENSMUST00000128450.8, ENSMUST00000128921.8, ENSMUST00000130720.8, ENSMUST00000134410.8, ENSMUST00000137867.8, ENSMUST00000148257.8

Found 408 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TTAAGTAGAGAGATGAGTGAAGGCACACTCAAGCCCAGAGAAGCGTaGAGCGAGTGGGAGGGAGACAATCTTCCGCTAGTAACTGCCAGC +
Preference number: 1 (lower is better)
Translates to: LSREMSEGTLKPREA*SEWEGDNLPLVTAS
Trigger: GCTGGCAGTTACTAGCGGAAGATTGTCTCCCTCCCACTCGCTTCACGCTTCTCTGGGCTTGAGTGTGCCTTCACTCATCTCTCTACTTAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp CAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTaGTTGACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTGG +
Preference number: 1 (lower is better)
Translates to: QAHCVSRAVGSIYVM*LTKCFRMIHQRGQW
Trigger: CCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 90 bp GTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTTGACCAAGTaGTTCAGGATGATACATCAACGAGGGCAGTGGACACAAAGCCTT +
Preference number: 1 (lower is better)
Translates to: VSRAVGSIYVMWLTK*FRMIHQRGQWTQSL
Trigger: AAGGCTTTGTGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp CACATGGAGACAGAGCTATCACCATGTGAAATTGGGGGAACAAGGTaGCAGAAGGCTGAGGCTGAGCTAAAAGAAAGCAAACATGAGCTG +
Preference number: 1 (lower is better)
Translates to: HMETELSPCEIGGTR*QKAEAELKESKHEL
Trigger: CAGCTCATGTTTGCTTTCTTTTAGCTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAATTTCACATGGTGATAGCTCTGTCTCCATGTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp GAACAAATAGAGAGAAAGAGTGCTTCCATGGGTGAAACACTTCAGTaGCTTCTGAGACCCTCTGGAGAGCAGGGTCTGGCTAAGAATAGG +
Preference number: 1 (lower is better)
Translates to: EQIERKSASMGETLQ*LLRPSGEQGLAKNR
Trigger: CCTATTCTTAGCCAGACCCTGCTCTCCAGAGGGTCTCAGAAGCCACTGAAGTGTTTCACCCATGGAAGCACTCTTTCTCTCTATTTGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp TCTGTCTTGGAAACCCTCCATAGAAATCACTGCCCTTGTTCATGGTaGTTTGGGAGACTCTTCCATAGGTGGGCAGATGCCCTAAACTCA +
Preference number: 1 (lower is better)
Translates to: SVLETLHRNHCPCSW*FGRLFHRWADALNS
Trigger: TGAGTTTAGGGCATCTGCCCACCTATGGAAGAGTCTCCCAAACCACCATGAACAAGGGCAGTGATTTCTATGGAGGGTTTCCAAGACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp TCTGGAAGCGTTTCCTTTGTTTCTTTTCCTTCGTCGGAGAATCTCTaGGGGCATGTGCATGTTGGGTGGAATGCTGAACTCACAAGAGGT +
Preference number: 1 (lower is better)
Translates to: SGSVSFVSFPSSENL*GHVHVGWNAELTRG
Trigger: ACCTCTTGTGAGTTCAGCATTCCACCCAACATGCACATGCCCTCAGAGATTCTCCGACGAAGGAAAAGAAACAAAGGAAACGCTTCCAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp ACATCAACGAGGGCAGTGGACACAAAGCCTTTCTCAGCACAGCGTTaGCAATGTTGTTATTGGATTGTGGAAGCATTAGGTTTTGACTCC +
Preference number: 1 (lower is better)
Translates to: TSTRAVDTKPFSAQR*QCCYWIVEALGFDS
Trigger: GGAGTCAAAACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTCGTTGATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp ATGTGGTTGACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTaGACACAAAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTATT +
Preference number: 1 (lower is better)
Translates to: MWLTKCFRMIHQRGQ*TQSLSQHSVGNVVI
Trigger: AATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 90 bp AAAGAGAGAACTGATTTGCAAAGCAGAGGGAGAGTGAGTCATAGATaGTATGGTCCAATGGAGACCCAAGGCTTTGCTTTGAACTTTCCC +
Preference number: 1 (lower is better)
Translates to: KERTDLQSRGRVSHR*YGPMETQGFALNFP
Trigger: GGGAAAGTTCAAAGCAAAGCCTTGGGTCTCCATTGGACCATAGCATCTATGACTCACTCTCCCTCTGCTTTGCAAATCAGTTCTCTCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 90 bp TTTCCTTTGTTTCTTTTCCTTCGTCGGAGAATCTCTGAGGGCATGTaGATGTTGGGTGGAATGCTGAACTCACAAGAGGTGATTTCAGAG +
Preference number: 1 (lower is better)
Translates to: FPLFLFLRRRISEGM*MLGGMLNSQEVISE
Trigger: CTCTGAAATCACCTCTTGTGAGTTCAGCATTCCACCCAACATGCACATGCCCTCAGAGATTCTCCGACGAAGGAAAAGAAACAAAGGAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp GTGGACACAAAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTaGATTGTGGAAGCATTAGGTTTTGACTCCCACAAAGTCTGGCTT +
Preference number: 1 (lower is better)
Translates to: VDTKPFSAQRWQCCY*IVEALGFDSHKVWL
Trigger: AAGCCAGACTTTGTGGGAGTCAAAACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp ACAAGTCACAGGATAGATATTCAAGGTCATTACTACTTTTCCATCTaGGTGAAGAGCTTCAAAGTGCACACATTGGCCTCTTCGGGGCCA +
Preference number: 1 (lower is better)
Translates to: TSHRIDIQGHYYFSI*VKSFKVHTLASSGP
Trigger: TGGCCCCGAAGAGGCCAATGTGTGCACTTTGAAGCTCTTCACCCAGATGGAAAAGTAGTAATGACCTTGAATATCTATCCTGTGACTTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp AGGGTATTTTATCATGAGAGACTGTGTCAGAGTCACTTACCAAGCTaGAGAGGCAGGCTACCATCTGTGAGAGCTGTCTTGTCTATCTTT +
Preference number: 1 (lower is better)
Translates to: RVFYHERLCQSHLPS*RGRLPSVRAVLSIF
Trigger: AAAGATAGACAAGACAGCTCTCACAGATGGTAGCCTGCCTCTTCAGCTTGGTAAGTGACTCTGACACAGTCTCTCATGATAAAATACCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 90 bp GCAGATGCTTGCTTTCCTAAAACTTTTATCTGGACATCTGTGACGTaGGCACAGCCTGTGCCAAGATCTTGCAAATGCATGAATTCCAAG +
Preference number: 1 (lower is better)
Translates to: ADACFPKTFIWTSVT*AQPVPRSCKCMNSK
Trigger: CTTGGAATTCATGCATTTGCAAGATCTTGGCACAGGCTGTGCTCACGTCACAGATGTCCAGATAAAAGTTTTAGGAAAGCAAGCATCTGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp TTCAGCTATAGTGACCAAGGTTATAGTTGCTTTGGCCACCCAACTTaGGGTGACTCACTGACAGGAAAAACACCTGCACTCTGTGATTAT +
Preference number: 1 (lower is better)
Translates to: FSYSDQGYSCFGHPT*GDSLTGKTPALCDY
Trigger: ATAATCACAGAGTGCAGGTGTTTTTCCTGTCAGTGAGTCACCTCAAGTTGGGTGGCCAAAGCAACTATAACCTTGGTCACTATAGCTGAA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp TACTCAATTGAGGTTTTCATCTACTTTGCATTCCTCAGTGGGCAATaGGTTGCCTGGCACTTCAGTCTAACAGGGACTGCATATACTGAT +
Preference number: 1 (lower is better)
Translates to: YSIEVFIYFAFLSGQ*VAWHFSLTGTAYTD
Trigger: ATCAGTATATGCAGTCCCTGTTAGACTGAAGTGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAGTAGATGAAAACCTCAATTGAGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCTGCCATCAGTaGAAAGAGAGGCCCATTGATTGTGCAAACTTTATATGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: SLAAYVSEDGLVCHQ*KERPIDCANFICLS
Trigger: ACTGAGGCATATAAAGTTTGCACAATCAATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 90 bp GAGCTTTTGTCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCTaGCATCAGTGGAAAGAGAGGCCCATTGATTGTGCAAACTTTATA +
Preference number: 1 (lower is better)
Translates to: ELLSLAAYVSEDGLV*HQWKERPIDCANFI
Trigger: TATAAAGTTTGCACAATCAATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAAAAGCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 90 bp GAACAACAATATGAACTAAATACCCCCGGAGCTTTTGTCTCTAGCTaGATATGTATCAGAAGATGGCCTAGTCTGCCATCAGTGGAAAGA +
Preference number: 1 (lower is better)
Translates to: EQQYELNTPGAFVSS*ICIRRWPSLPSVER
Trigger: TCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAAAAGCTCCGGGGGTATTTAGTTCATATTGTTGTTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp GGCAATGGGTCATTAAGGTACAGGGACGGATGTAAACAATTTGGCTaGTGTCCTGGAATGTATTCTTTCCAAAATGTGCAATATTGGGAC +
Preference number: 1 (lower is better)
Translates to: GNGSLRYRDGCKQFG*CPGMYSFQNVQYWD
Trigger: GTCCCAATATTGCACATTTTGGAAAGAATACATTCCAGGACACCAGCCAAATTGTTTACATCCGTCCCTGTACCTTAATGACCCATTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp TCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTaGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACA +
Preference number: 1 (lower is better)
Translates to: SEVAVVEWVISVKKV*THKDILQFLLWKKT
Trigger: TGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR TCA 90 bp ACCCACACTGCAGTTACAGTTGTGAACAGACAGAGCCTTGTAAACTaGAAAATAAACTCCTCTTTGTGTGTTTGTGTGTGTGTGTGTGTG +
Preference number: 1 (lower is better)
Translates to: THTAVTVVNRQSLVN*KINSSLCVCVCVCV
Trigger: CACACACACACACACACAAACACACAAAGAGGAGTTTATTTTTCAGTTTACAAGGCTCTGTCTGTTCACAACTGTAACTGCAGTGTGGGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 90 bp GCCTGGCACTTCAGTCTAACAGGGACTGCATATACTGATAAACTTTaGATACTCACTGTAACGTTGCAGCAGAAATCACTCTACTCACTT +
Preference number: 1 (lower is better)
Translates to: AWHFSLTGTAYTDKL*ILTVTLQQKSLYSL
Trigger: AAGTGAGTAGAGTGATTTCTGCTGCAACGTTACAGTGAGTATTCAAAGTTTATCAGTATATGCAGTCCCTGTTAGACTGAAGTGCCAGGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp TTACCAGTCAGTTACTTATTGAGATGGCTGCTATCAGGAAGGAACTaGTGTCTCAGCAGCCACCAGAGAGAATGTTTACAGAAAATTTCT +
Preference number: 1 (lower is better)
Translates to: LPVSYLLRWLLSGRN*CLSSHQRECLQKIS
Trigger: AGAAATTTTCTGTAAACATTCTCTCTGGTGGCTGCTGAGACATCAGTTCCTTCCTGATAGCAGCCATCTCAATAAGTAACTGACTGGTAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 90 bp CAGTTGTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATTGCATaGGCTTGGACAACTTTCCCAAATACTTCTGTTGTTCACAAGATG +
Preference number: 1 (lower is better)
Translates to: QLFLRHSVWRIQGIA*AWTTFPNTSVVHKM
Trigger: CATCTTGTGAACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAACAACTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp ATGCTACAGCGGAGTCTTTACTTCAATATGGCTTTACAGAAGGCATaGTCACTCAGTGGGCTGATTACTTTGGTTTATACAAGAGACTCT +
Preference number: 1 (lower is better)
Translates to: MLQRSLYFNMALQKA*SLSGLITLVYTRDS
Trigger: AGAGTCTCTTGTATAAACCAAAGTAATCAGCCCACTGAGTGATCATGCCTTCTGTAAAGCCATATTGAAGTAAAGACTCCGCTGTAGCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 90 bp GATGCAGTTGTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATTaGATGAGCTTGGACAACTTTCCCAAATACTTCTGTTGTTCACAA +
Preference number: 1 (lower is better)
Translates to: DAVVSQTFCMEDSGY*MSLDNFPKYFCCSQ
Trigger: TTGTGAACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAACAACTGCATC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp TGCAGGCTTAGAATGCTCTCTCTTCTCCAAATGTTTTCTCAGCATTaGTTTGAACAAGACATTATTGATCCCTTCCTGAGCCTTCTTCAA +
Preference number: 1 (lower is better)
Translates to: CRLRMLSLLQMFSQH*FEQDIIDPFLSLLQ
Trigger: TTGAAGAAGGCTCAGGAAGGGATCAATAATGTCTTGTTCAAACCAATGCTGAGAAAACATTTGGAGAAGAGAGAGCATTCTAAGCCTGCA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp GCAAAGAGCAAATGTACAAATCACAGGAAACAAGTTGATTTGTTCTaGAAATCAGCTGTTGGAAAGAGGCAAATGCTGAACACAAGCGTG +
Preference number: 1 (lower is better)
Translates to: AKSKCTNHRKQVDLF*KSAVGKRQMLNTSV
Trigger: CACGCTTGTGTTCAGCATTTGCCTCTTTCCAACAGCTGATTTCCAGAACAAATCAACTTGTTTCCTGTGATTTGTACATTTGCTCTTTGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp GATTGCTCAGATAAAAGGAAACAAAACAAAGTCAGATCTCTGTCTTaGAAACCCTCCATAGAAATCACTGCCCTTGTTCATGGTGGTTTG +
Preference number: 1 (lower is better)
Translates to: DCSDKRKQNKVRSLS*KPSIEITALVHGGL
Trigger: CAAACCACCATGAACAAGGGCAGTGATTTCTATGGAGGGTTTCCAAGACAGAGATCTGACTTTGTTTTGTTTCCTTTTATCTGAGCAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp ATAAACTGCTTGTTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTaGGTAATTTCAGTGAAGAAGGTTTGGACTCACAAGGACATCTTA +
Preference number: 1 (lower is better)
Translates to: INCLLKCNSEVAVVE*VISVKKVWTHKDIL
Trigger: TAAGATGTCCTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATTACACTTTAACAAGCAGTTTAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR TCA 90 bp AAAACGCAATTGTCTCTGACTGATCTTTCAATAATACCCAAGAAATaGCTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACAAGGT +
Preference number: 1 (lower is better)
Translates to: KTQLSLTDLSIIPKK*LFTRECLQEAMVQG
Trigger: ACCTTGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATTATTGAAAGATCAGTCAGAGACAATTGCGTTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 90 bp CACCATATGATCCTAGAGTCTGACTTACATGGTGTCCATATAATATaGAATACATGTTCAGTATGTAGAGACAAATGGGTGCTGAGACTT +
Preference number: 1 (lower is better)
Translates to: HHMILESDLHGVHII*NTCSVCRDKWVLRL
Trigger: AAGTCTCAGCACCCATTTGTCTCTACATACTGAACATGTATTTCATATTATATGGACACCATGTAAGTCAGACTCTAGGATCATATGGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp ATACTAATCAACATGCTAAGATTATCTGTGAGTCCCTTTACTCATTaGCCAGACTGTATAGATGGTTGCCTTTCTACTCTATGTGTCTCA +
Preference number: 1 (lower is better)
Translates to: ILINMLRLSVSPFTH*PDCIDGCLSTLCVS
Trigger: TGAGACACATAGAGTAGAAAGGCAACCATCTATACAGTCTGGTCAATGAGTAAAGGGACTCACAGATAATCTTAGCATGTTGATTAGTAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 90 bp AGGCTTCTTGTGTCCTTTCTATTTTATGTCATCTCACCTATAATTTaGAGGCTTAGAATGCTCTCTCTTCTCCAAATGTTTTCTCAGCAT +
Preference number: 1 (lower is better)
Translates to: RLLVSFLFYVISPII*RLRMLSLLQMFSQH
Trigger: ATGCTGAGAAAACATTTGGAGAAGAGAGAGCATTCTAAGCCTGCAAATTATAGGTGAGATGACATAAAATAGAAAGGACACAAGAAGCCT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 90 bp TTTAGGTTTGTGTCTGTGTGGAGAGTTAACAATTGGTTCATCTTATaGAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGAC +
Preference number: 1 (lower is better)
Translates to: FRFVSVWRVNNWFIL*RVKSLFVGNFFPAD
Trigger: GTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGATGAACCAATTGTTAACTCTCCACACAGACACAAACCTAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 90 bp ATATATGGTAGCAAAGAGCAAATGTACAAATCACAGGAAACAAGTTaGTTTGTTCTGGAAATCAGCTGTTGGAAAGAGGCAAATGCTGAA +
Preference number: 1 (lower is better)
Translates to: IYGSKEQMYKSQETS*FVLEISCWKEANAE
Trigger: TTCAGCATTTGCCTCTTTCCAACAGCTGATTTCCAGAACAAATCAACTTGTTTCCTGTGATTTGTACATTTGCTCTTTGCTACCATATAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp GCGGAAGTGAGTGATTGTGACTTCTTTTTATTTAAAGGGACAGGGTaGGGTGTTATTCTGATGATTATAAAATGTGGTTTCTTAAGTAGA +
Preference number: 1 (lower is better)
Translates to: AEVSDCDFFLFKGTG*GVILMIIKCGFLSR
Trigger: TCTACTTAAGAAACCACATTTTATAATCATCAGAATAACACCCCACCCTGTCCCTTTAAATAAAAAGAAGTCACAATCACTCACTTCCGC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 90 bp GAGTCTTTACTTCAATATGGCTTTACAGAAGGCATGATCACTCAGTaGGCTGATTACTTTGGTTTATACAAGAGACTCTTACATTGTTTA +
Preference number: 1 (lower is better)
Translates to: ESLLQYGFTEGMITQ*ADYFGLYKRLLHCL
Trigger: TAAACAATGTAAGAGTCTCTTGTATAAACCAAAGTAATCAGCCCACTGAGTGATCATGCCTTCTGTAAAGCCATATTGAAGTAAAGACTC
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 90 bp TACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATaGTACAAGGTAAAGACGAATTGCTATAAATTCAATATAAATTGT +
Preference number: 1 (lower is better)
Translates to: YPRNDFLPENASRKQ*YKVKTNCYKFNINC
Trigger: ACAATTTATATTGAATTTATAGCAATTCGTCTTTACCTTGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTA
36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp CACTTGTGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGAAGCCCAGAGAAGCGTaGAGCGAGTGGGAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: HLWLWYTERGGRREVTSQKPREA*SEWEGD
Trigger: GTCTCCCTCCCACTCGCTTCACGCTTCTCTGGGCTT...CTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR GCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTAAGCAAGTCTCAAGGTaGAGAGAACACTCGGGGATC +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLKQVSR*REHSGI
Trigger: GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTT...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp GCCCAGAGAAGCGTGAAGCGAGTGGGAGGGAGACAATCTTCCGCTAGTAACTGCGAAAGAGTGCTTCCATaGGTGAAACACTTCAGTGGC +
Preference number: 2 (lower is better)
Translates to: AQRSVKRVGGRQSSASNCERVLP*VKHFSG
Trigger: GCCACTGAAGTGTTTCACCCATGGAAGCACTCTTTC...GCAGTTACTAGCGGAAGATTGTCTCCCTCCCACTCGCTTCACGCTTCTCTGGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTCATGTGCATGTTGGGTaGAATGCTGAACTCACAAGA +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLHVHVG*NAELTR
Trigger: TCTTGTGAGTTCAGCATTCCACCCAACATGCACATG...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp GCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTaGACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTGGACA +
Preference number: 2 (lower is better)
Translates to: AHCVSRAVGSIYVMW*TKCFRMIHQRGQWT
Trigger: TGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp GGGAGCATCTATGTGATGTGGTTGACCAAGTGCTTCAGGATGATACATCAACGACACTTCAGTGGCTTCTaGGACCCTCTGGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: GSIYVMWLTKCFRMIHQRHFSGF*DPLESR
Trigger: CCTGCTCTCCAGAGGGTCTCAGAAGCCACTGAAGTG...TCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCTTATCTGGACATCTGTaGCGTGAGCACAGCCTGTGC +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGILSGHL*REHSLC
Trigger: GCACAGGCTGTGCTCACGTCACAGATGTCCAGATAA...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTCCCATTTGCAAAATGTaGACAGAAAAACCAAGCCTG +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLPICKM*TEKPSL
Trigger: CAGGCTTGGTTTTTCTGTGCACATTTTGCAAATGGG...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp CAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTTGACCGACTCCCACAAAGTCTaGCTTATGCTCTTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: QAHCVSRAVGSIYVMWLTDSHKV*LMLFSS
Trigger: TGAGCTGAAGAGCATAAGCCAGACTTTGTGGGAGTC...GGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGCCTGCCCTTGGAGTTaGCTTGCAGATTCTACCATC +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIACPWS*LADSTI
Trigger: GATGGTAGAATCTGCAAGCCAACTCCAAGGGCAGGC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGAGAATAGCAGGCCCTaGAAAGAGGGGCTGAAAAGG +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIENSRP*KEGLKR
Trigger: CCTTTTCAGCCCCTCTTTCCAGGGCCTGCTATTCTC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp GTGAGTCATAGATGCTATGGTCCAATGGAGACCCAAGGCTTTGCTTaGAACTTTCCCAGGAAGCCTGCCCTTGGAGTTGGCTTGCAGATT +
Preference number: 2 (lower is better)
Translates to: VSHRCYGPMETQGFA*NFPRKPALGVGLQI
Trigger: AATCTGCAAGCCAACTCCAAGGGCAGGCTTCCTGGGAAAGTTCAAAGCAAAGCCTTGGGTCTCCATTGGACCATAGCATCTATGACTCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp GACCATGCCTTCCAGGTTTCTGCCATTCAAAAACAGATTTCAATGTGTGTGTGTAAGCCCAGAGAAGCGTaGAGCGAGTGGGAGGGAGAC +
Preference number: 2 (lower is better)
Translates to: DHAFQVSAIQKQISMCVCKPREA*SEWEGD
Trigger: GTCTCCCTCCCACTCGCTTCACGCTTCTCTGGGCTT...ACACACACACATTGAAATCTGTTTTTGAATGGCAGAAACCTGGAAGGCATGGTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR TCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTTCACAGGAAACAAGTTaGTTTGTTCTGGAAATCAGC +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLSQETS*FVLEIS
Trigger: GCTGATTTCCAGAACAAATCAACTTGTTTCCTGTGA...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTTCTATATCCAGTTGGTaGAAGAGAGAACTGATTTGC +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLSISSW*KRELIC
Trigger: GCAAATCAGTTCTCTCTTTCACCAACTGGATATAGA...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp TGTGAAATTGGGGGAACAAGGTGGCAGAAGGCTGAGGCTGAGCTAAAAGAAAGCCTTGTTCTCAGCATTTaGCCACGATGGTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: CEIGGTRWQKAEAELKESLVLSI*PRWWWN
Trigger: GTTCCACCACCATCGTGGCCAAATGCTGAGAACAAG...GCTTTCTTTTAGCTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp GCCACGATGGTGGTGGAACCCATTTTGAGAGGCTCATATTTGAGTCTGCTGCTTCTTGTTCTCAGCATTTaGCCACGATGGTGGTGGAAC +
Preference number: 2 (lower is better)
Translates to: ATMVVEPILRGSYLSLLLLVLSI*PRWWWN
Trigger: GTTCCACCACCATCGTGGCCAAATGCTGAGAACAAG...AAGCAGCAGACTCAAATATGAGCCTCTCAAAATGGGTTCCACCACCATCGTGGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTACCAGACTGTATAGATaGTTGCCTTTCTACTCTATG +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLTRLYR*LPFYSM
Trigger: CATAGAGTAGAAAGGCAACCATCTATACAGTCTGGT...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp ACCAAGCTGAAGAGGCAGGCTACCATCTGTGAGAGCTGTCTTGTCTATCTTTCCGGAAGCATTAGGTTTTaGCTCCCACAAAGTCTGGCT +
Preference number: 2 (lower is better)
Translates to: TKLKRQATICESCLVYLSGSIRF*LPQSLA
Trigger: AGCCAGACTTTGTGGGAGTCAAAACCTAATGCTTCC...GGAAAGATAGACAAGACAGCTCTCACAGATGGTAGCCTGCCTCTTCAGCTTGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTATTTGGCTGGTGTCCTaGAATGTATTCTTTCCAAAA +
Preference number: 2 (lower is better)
Translates to: SEVVAALETGDLMLQRSLIWLVS*NVFFPK
Trigger: TTTTGGAAAGAATACATTCCAGGACACCAGCCAAAT...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp CAAAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTGGATTGTGGAAGCATGTGAAGCACTGGGTATaGGGAGTTTTCCAGAGTGGG +
Preference number: 2 (lower is better)
Translates to: QSLSQHSVGNVVIGLWKHVKHWV*GVFQSG
Trigger: CCCACTCTGGAAAACTCCTCATACCCAGTGCTTCAC...ATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR GCA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTCTTTCCCAGGAAGCCTaGCCTTGGAGTTGGCTTGCA +
Preference number: 2 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCLSQEA*PWSWLA
Trigger: TGCAAGCCAACTCCAAGGGCAGGCTTCCTGGGAAAG...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp TTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATTGGAGCAGACTAGACAAAAGATTGGGGGAACAAGGTaGCAGAAGGCTGAGGCTGAG +
Preference number: 2 (lower is better)
Translates to: LFVVLRVNSRALEQTRQKIGGTR*QKAEAE
Trigger: CTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAAT...CTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR CCA 90 bp CCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTGGATTGTGGAAGCATTAGGTGTACACAGAGCGGGGTaGCAGAAGAGAAGTTACCAG +
Preference number: 2 (lower is better)
Translates to: PFSAQRWQCCYWIVEALGVHRAG*QKRSYQ
Trigger: CTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTAC...ACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp GACCATGCCTTCCAGGTTTCTGCCATTCAAAAACAGATTTCAATGTGTGTGTGTCTATCAGGAAGGAACTaGTGTCTCAGCAGCCACCAG +
Preference number: 2 (lower is better)
Translates to: DHAFQVSAIQKQISMCVCLSGRN*CLSSHQ
Trigger: CTGGTGGCTGCTGAGACATCAGTTCCTTCCTGATAG...ACACACACACATTGAAATCTGTTTTTGAATGGCAGAAACCTGGAAGGCATGGTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR TCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCTCGTCGGAGAATCTCTaGGGGCATGTGCATGTTGGG +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPSSENL*GHVHVG
Trigger: CCCAACATGCACATGCCCTCAGAGATTCTCCGACGA...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGGTTTTCATCTACTTTaGATTCCTCAGTGGGCAATG +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIGFHLL*IPQWAM
Trigger: CATTGCCCACTGAGGAATGCAAAGTAGATGAAAACC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCCCTGTGCCAAGATCTTaGAAATGCATGAATTCCAAG +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIPVPRS*KCMNSK
Trigger: CTTGGAATTCATGCATTTGCAAGATCTTGGCACAGG...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp ATGATACATCAACGAGGGCAGTGGACACAAAGCCTTTCTCAGCACAGCGTTGGCTTTAAAGGGACAGGGTaGGGTGTTATTCTGATGATT +
Preference number: 2 (lower is better)
Translates to: MIHQRGQWTQSLSQHSVGFKGTG*GVILMI
Trigger: AATCATCAGAATAACACCCCACCCTGTCCCTTTAAA...GCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTCGTTGATGTATCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp TTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATTGGAGCAGACTAGACAAAAGGAGTGCTTCCATGGGTaGAACACTTCAGTGGCTTCT +
Preference number: 2 (lower is better)
Translates to: LFVVLRVNSRALEQTRQKECFHG*NTSVAS
Trigger: AGAAGCCACTGAAGTGTTTCACCCATGGAAGCACTC...CTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGACCCAAGGCTTTGCTTTaGACTTTCCCAGGAAGCCTG +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRPKALL*TFPGSL
Trigger: CAGGCTTCCTGGGAAAGTTCAAAGCAAAGCCTTGGG...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCCTGGTAAGATTTGAGTaGATGAATACCCCATTTGGT +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGILVRFE*MNTPFG
Trigger: ACCAAATGGGGTATTCATTCACTCAAATCTTACCAG...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCCCTTGGAGTTGGCTTaGAGATTCTACCATCCCCTG +
Preference number: 2 (lower is better)
Translates to: LYVSQCFITRDRRNWREQPLELA*RFYHPL
Trigger: CAGGGGATGGTAGAATCTGCAAGCCAACTCCAAGGG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCAGGTTGTGTGTATTTTaGATGTCATGGTCTTGTGTG +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIRLCVF*MSWSCV
Trigger: CACACAAGACCATGACATGCAAAATACACACAACCT...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGCTGATGGTAAGTTGTaGTCATATGAAGTTCCTTCT +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIADGKL*SYEVPS
Trigger: AGAAGGAACTTCATATGAGCACAACTTACCATCAGC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp GTGGTTGACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTGGACACAAAGAGTTACTTATTGAGATaGCTGCTATCAGGAAGGAAC +
Preference number: 2 (lower is better)
Translates to: VVDQVLQDDTSTRAVDTKSYLLR*LLSGRN
Trigger: GTTCCTTCCTGATAGCAGCCATCTCAATAAGTAACT...CTTTGTGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGACTTTGCATTCCTCAGTaGGCAATGGGTTGCCTGGCA +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRLCIPQ*AMGCLA
Trigger: TGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAG...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp TTTTATCTGGACATCTGTGACGTGAGCACAGCCTGTGCCAAGATCTaGCAAATGCATGAATTCCAAGGAGATGCTGACGTTCGTTATACT +
Preference number: 2 (lower is better)
Translates to: FYLDICDVSTACAKI*QMHEFQGDADVRYT
Trigger: AGTATAACGAACGTCAGCATCTCCTTGGAATTCATGCATTTGCAAGATCTTGGCACAGGCTGTGCTCACGTCACAGATGTCCAGATAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp TATAAGCTTTGGCTGCTTGCATTTGTAGTTCTGGAAGCGTTTCCTTaGTTTCTTTTCCTTCGTCGGAGAATCTCTGAGGGCATGTGCATG +
Preference number: 2 (lower is better)
Translates to: YKLWLLAFVVLEAFP*FLFLRRRISEGMCM
Trigger: CATGCACATGCCCTCAGAGATTCTCCGACGAAGGAAAAGAAACAAAGGAAACGCTTCCAGAACTACAAATGCAAGCAGCCAAAGCTTATA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp TTGTTAGTTATATCATCCTACAGCCTCACAGTAAAGACATCTTACTGTTTTGGACACTTCAGTGGCTTCTaGGACCCTCTGGAGAGCAGG +
Preference number: 2 (lower is better)
Translates to: LLVISSYSLTVKTSYCFGHFSGF*DPLESR
Trigger: CCTGCTCTCCAGAGGGTCTCAGAAGCCACTGAAGTG...TCCAAAACAGTAAGATGTCTTTACTGTGAGGCTGTAGGATGATATAACTAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCAATTCTCTGTGTCTTTaGAGATGCAGTTGTTTCTCA +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGINSLCL*RCSCFS
Trigger: TGAGAAACAACTGCATCTTCAAAGACACAGAGAATT...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAATCTCTGAGGGCATGTaGATGTTGGGTGGAATGCTG +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRISEGM*MLGGML
Trigger: CAGCATTCCACCCAACATGCACATGCCCTCAGAGAT...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp AACGAGGGCAGTGGACACAAAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTACTAGATTATTGGCACTaGGAAAATTCTGTCTTGTTC +
Preference number: 2 (lower is better)
Translates to: NEGSGHKAFLSTALAMLLLDYWH*ENSVLF
Trigger: GAACAAGACAGAATTTTCCCAGTGCCAATAATCTAG...TAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTCGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACAGACTCCCACAAAGTCTaGCTTATGCTCTTCAGCTCA +
Preference number: 2 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTDSHKV*LMLFSS
Trigger: TGAGCTGAAGAGCATAAGCCAGACTTTGTGGGAGTC...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCAAGGATAGAATGTCTTaGCAAAGAAGGTTTAGCTTG +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIKDRMS*QRRFSL
Trigger: CAAGCTAAACCTTCTTTGCCAAGACATTCTATCCTT...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp AAGGTAAAGACGAATTGCTATAAATTCAATATAAATTGTGATCTCTaGCTGGGATCCCAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGC +
Preference number: 2 (lower is better)
Translates to: KVKTNCYKFNINCDL*LGSQAHCVSRAVGS
Trigger: GCTCCCTACAGCCCTGGAAACACAATGGGCCTGGGATCCCAGCAAGAGATCACAATTTATATTGAATTTATAGCAATTCGTCTTTACCTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 90 bp CATGCCTTCTGTCTGATGACAAATCTATTGCAGAGGCTGTACCTGTaGGCACCATCCCTCAAGAATAGTAAGCGATGTGCTTTTATTTCA +
Preference number: 2 (lower is better)
Translates to: HAFCLMTNLLQRLYL*APSLKNSKRCAFIS
Trigger: TGAAATAAAAGCACATCGCTTACTATTCTTGAGGGATGGTGCCAACAGGTACAGCCTCTGCAATAGATTTGTCATCAGACAGAAGGCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp AGTGAAGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTaGGAAAAAGACATGGCAGAAACCTTTCTGAGGACTGGTCCCTCT +
Preference number: 2 (lower is better)
Translates to: SEEGLDSQGHLTISP*EKDMAETFLRTGPS
Trigger: AGAGGGACCAGTCCTCAGAAAGGTTTCTGCCATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTCACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR CAA 90 bp TTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTaGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGAC +
Preference number: 2 (lower is better)
Translates to: FRGGCGRVGNFSEEG*DSQGHLTISPLEKD
Trigger: GTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR-3UTR TCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCAAAGCAGAGGGAGAGTaGGTCATAGATGCTATGGTC +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPKAEGE*VIDAMV
Trigger: GACCATAGCATCTATGACTCACTCTCCCTCTGCTTT...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAGGTGAAAGAGAGAACTaGTTTGCAAAGCAGAGGGAG +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRGEREN*FAKQRE
Trigger: CTCCCTCTGCTTTGCAAATCAGTTCTCTCTTTCACC...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCAAAGAGTGAAACAGGATaGGCACAGGAATGTGGGTGG +
Preference number: 2 (lower is better)
Translates to: NENGGASFPSGQTLTWSSKSETG*AQECGW
Trigger: CCACCCACATTCCTGTGCTCATCCTGTTTCACTCTT...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCCTGGAAAGAGGGGCTaGAAAGGCTCTAAGAATGTA +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPPGKRG*KGSKNV
Trigger: TACATTCTTAGAGCCTTTTCAGCCCCTCTTTCCAGG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp TGTAATGTGTGCAGATGCCCATGGAGGTCAGAAGAGGGTGTTGGATTCCTTGAAAAAGCAAACATGAGCTaGTCCAAAACCACAATTAAC +
Preference number: 2 (lower is better)
Translates to: CNVCRCPWRSEEGVGFLEKANMS*SKTTIN
Trigger: GTTAATTGTGGTTTTGGAGCAGCTCATGTTTGCTTT...TTCAAGGAATCCAACACCCTCTTCTGACCTCCATGGGCATCTGCACACATTACA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR GCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTCGTGAGCACAGCCTGTaGCAAGATCTTGCAAATGCA +
Preference number: 2 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFREHSL*QDLANA
Trigger: TGCATTTGCAAGATCTTGGCACAGGCTGTGCTCACG...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCCTGCATTTTTATAATTaGCTGAAAACCTCACTGAGA +
Preference number: 2 (lower is better)
Translates to: TEHKAQKQVSRCREHSGILHFYN*LKTSLR
Trigger: TCTCAGTGAGGTTTTCAGGCAATTATAAAAATGCAG...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCTTAGTAGCAGTAACATaGCCAGAGCTGGACACTGAG +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPLVAVT*PELDTE
Trigger: CTCAGTGTCCAGCTCTGGGCATGTTACTGCTACTAA...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp TTGTTAGTTATATCATCCTACAGCCTCACAGTAAAGACATCTTACTGTTTTGGAGCCCTACATGGGTGCTaGGAACTGAACTCTGGTCCT +
Preference number: 2 (lower is better)
Translates to: LLVISSYSLTVKTSYCFGALHGC*ELNSGP
Trigger: AGGACCAGAGTTCAGTTCCCAGCACCCATGTAGGGC...TCCAAAACAGTAAGATGTCTTTACTGTGAGGCTGTAGGATGATATAACTAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 90 bp CAAAATTTAAAGTCTAACCAGGCAGGCATCCTTGAGACTAGATTATaGGCACTGGGAAAATTCTGTCTTGTTCTCAGCATTTGGCCACGA +
Preference number: 2 (lower is better)
Translates to: QNLKSNQAGILETRL*ALGKFCLVLSIWPR
Trigger: TCGTGGCCAAATGCTGAGAACAAGACAGAATTTTCCCAGTGCCAATAATCTAGTCTCAAGGATGCCTGCCTGGTTAGACTTTAAATTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 90 bp CGGGGCCAGGCATACAATTCAGTGTCATTCAAGAATGAATCAACATaGTTTTCAGAATGGAAAGTCTTGAATTACAGGCTCCTGGGTTCA +
Preference number: 2 (lower is better)
Translates to: RGQAYNSVSFKNEST*FSEWKVLNYRLLGS
Trigger: TGAACCCAGGAGCCTGTAATTCAAGACTTTCCATTCTGAAAACAATGTTGATTCATTCTTGAATGACACTGAATTGTATGCCTGGCCCCG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTATAGCAGTACCAATAGGAGATACTTATTGATCCCTTCCTaGGCCTTCTTCAAGTTCTTG +
Preference number: 2 (lower is better)
Translates to: VCVCVCVCVFYSSTNRRYLLIPS*AFFKFL
Trigger: CAAGAACTTGAAGAAGGCTCAGGAAGGGATCAATAA...GTATCTCCTATTGGTACTGCTATAAAACACACACACACACACACACACACACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAATTCAGGGTATTGCATaGGCTTGGACAACTTTCCCA +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRIQGIA*AWTTFP
Trigger: TGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAAT...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGAGAGTGAGTCATAGATaGTATGGTCCAATGGAGACC +
Preference number: 2 (lower is better)
Translates to: LYVSQCFITRDRRNWREQRVSHR*YGPMET
Trigger: GGTCTCCATTGGACCATAGCATCTATGACTCACTCT...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp CCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTGGATTGTGGAAGCATTAGGTAGTTACTTATTGAGATaGCTGCTATCAGGAAGGAAC +
Preference number: 2 (lower is better)
Translates to: PFSAQRWQCCYWIVEALGSYLLR*LLSGRN
Trigger: GTTCCTTCCTGATAGCAGCCATCTCAATAAGTAACT...ACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp TGTAGGGAGCATCTATGTGATGTGGTTGACCAAGTGCTTCAGGATGATACATCATTTAAAGGGACAGGGTaGGGTGTTATTCTGATGATT +
Preference number: 2 (lower is better)
Translates to: CREHLCDVVDQVLQDDTSFKGTG*GVILMI
Trigger: AATCATCAGAATAACACCCCACCCTGTCCCTTTAAA...TGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTGATGCCCTAAACTCATaGGAGAAATGTGTTATGGGT +
Preference number: 2 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCDALNS*EKCVMG
Trigger: ACCCATAACACATTTCTCCCATGAGTTTAGGGCATC...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCATGCCCTTGTTCATGGTaGTTTGGGAGACTCTTCCAT +
Preference number: 2 (lower is better)
Translates to: NENGGASFPSGQTLTWSSCPCSW*FGRLFH
Trigger: ATGGAAGAGTCTCCCAAACCACCATGAACAAGGGCA...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp AGATGCAGTTGTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATaGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTTGTTCACA +
Preference number: 2 (lower is better)
Translates to: RCSCFSDILYGGFRV*HELGQLSQILLLFT
Trigger: TGTGAACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAACAACTGCATCT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACCTTTGGTTGTTCATTaGCTGAGGATTCACCTTGGA +
Preference number: 2 (lower is better)
Translates to: NENGGASFPSGQTLTWSSPLVVH*LRIHLG
Trigger: TCCAAGGTGAATCCTCAGTCAATGAACAACCAAAGG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp CAAAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTGGATTGTGGAAGCATAAAGCAAACATGAGCTaGTCCAAAACCACAATTAAC +
Preference number: 2 (lower is better)
Translates to: QSLSQHSVGNVVIGLWKHKANMS*SKTTIN
Trigger: GTTAATTGTGGTTTTGGAGCAGCTCATGTTTGCTTT...ATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR GCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCTCCATAGAAATCACTaGCCTTGTTCATGGTGGTTT +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPLHRNH*PCSWWF
Trigger: AAACCACCATGAACAAGGGCAGTGATTTCTATGGAG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTCCAAGATCTTGCAAATaGATGAATTCCAAGGAGATG +
Preference number: 2 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCPRSCK*MNSKEM
Trigger: CATCTCCTTGGAATTCATGCATTTGCAAGATCTTGG...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAGAGGATTCAGGGTATTaGATGAGCTTGGACAACTTT +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNREDSGY*MSLDNF
Trigger: AAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTC...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp CTCTTCTCCAAATGTTTTCTCAGCATTGGTTTGAACAAGACATTATTGATCCCTGTAAATTGCCCTACATaGGTGCTGGGAACTGAACTC +
Preference number: 2 (lower is better)
Translates to: LFSKCFLSIGLNKTLLIPVNCPT*VLGTEL
Trigger: GAGTTCAGTTCCCAGCACCCATGTAGGGCAATTTAC...AGGGATCAATAATGTCTTGTTCAAACCAATGCTGAGAAAACATTTGGAGAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCATGAGCACAGGAATGTaGGTGGCTCTGCATTTTTAT +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPMSTGM*VALHFY
Trigger: ATAAAAATGCAGAGCCACCCACATTCCTGTGCTCAT...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp GTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATTGCATGAGCTaGGACAACTTTCCCAAATACTTCTGTTGTTCACAAGATGTCTTA +
Preference number: 2 (lower is better)
Translates to: VSQTFCMEDSGYCMS*DNFPKYFCCSQDVL
Trigger: TAAGACATCTTGTGAACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACACAGAGCCTTGTAAACTaGAAAATAAACTCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTQSLVN*KINSSL
Trigger: CAAAGAGGAGTTTATTTTTCAGTTTACAAGGCTCTG...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR TCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGAAGCGTGTGGAGGAGTaGAGTAGTGTTTTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: LYVSQCFITRDRRNWREQKRVEE*SSVFLF
Trigger: AAAAAGAAAAACACTACTTCACTCCTCCACACGCTT...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp TTGTTAGTTATATCATCCTACAGCCTCACAGTAAAGACATCTTACTGTTTTGGATGTAATGTGTGCAGATaGCCATGGAGGTCAGAAGAG +
Preference number: 2 (lower is better)
Translates to: LLVISSYSLTVKTSYCFGCNVCR*PWRSEE
Trigger: CTCTTCTGACCTCCATGGGCATCTGCACACATTACA...TCCAAAACAGTAAGATGTCTTTACTGTGAGGCTGTAGGATGATATAACTAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR GCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGATTTGAAAAGGTTCACTaGGTGGAATTCATTGGCCTT +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRFEKVH*VEFIGL
Trigger: AAGGCCAATGAATTCCACGCAGTGAACCTTTTCAAA...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACACTAGATTATTGGCACTaGGAAAATTCTGTCTTGTTC +
Preference number: 2 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTLDYWH*ENSVLF
Trigger: GAACAAGACAGAATTTTCCCAGTGCCAATAATCTAG...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCGCACAGGAATGTGGGTaGCTCTGCATTTTTATAATT +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPAQECG*LCIFII
Trigger: AATTATAAAAATGCAGAGCCACCCACATTCCTGTGC...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp ATGGTAGCAAAGAGCAAATGTACAAATCACAGGAAACAAGTTGATTaGTTCTGGAAATCAGCTGTTGGAAAGAGGCAAATGCTGAACACA +
Preference number: 2 (lower is better)
Translates to: MVAKSKCTNHRKQVD*FWKSAVGKRQMLNT
Trigger: TGTGTTCAGCATTTGCCTCTTTCCAACAGCTGATTTCCAGAACAAATCAACTTGTTTCCTGTGATTTGTACATTTGCTCTTTGCTACCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTAAAACCCAAAGTCAGTaGTGGTTGCTGTTTAACGTA +
Preference number: 2 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFKTQSQ*WLLFNV
Trigger: TACGTTAAACAGCAACCATCACTGACTTTGGGTTTT...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR TCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTCAGAATCAAGAAGACTaGATTCCAAAAGGCTGTAGA +
Preference number: 2 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFQNQED*IPKGCR
Trigger: TCTACAGCCTTTTGGAATTCAGTCTTCTTGATTCTG...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACACTGGGCAGATGCTTaGTTTCCTAAAACTTTTATC +
Preference number: 2 (lower is better)
Translates to: NENGGASFPSGQTLTWSSHWADA*FPKTFI
Trigger: GATAAAAGTTTTAGGAAAGCAAGCATCTGCCCAGTG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTTCTCAACTCCTAGTGTaGCTTCTTTTATTCAAGCAG +
Preference number: 2 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFSQLLV*LLLFKQ
Trigger: CTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGA...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCAAGTTGATTTGTTCTaGAAATCAGCTGTTGGAAAG +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPQVDLF*KSAVGK
Trigger: CTTTCCAACAGCTGATTTCCAGAACAAATCAACTTG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAAAAAGGTTCACTGCGTaGAATTCATTGGCCTTATTT +
Preference number: 2 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRKRFTA*NSLALF
Trigger: AAATAAGGCCAATGAATTCCACGCAGTGAACCTTTT...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp TTTGTAAAACATATACAGATCTCTTTCTCCCTTGTCTATGCTAAATaGAAGTTGCTAAGGGCAGGCTGGGTCATTTTACAAATGATGAGC +
Preference number: 2 (lower is better)
Translates to: FVKHIQISFSLVYAK*KLLRAGWVILQMMS
Trigger: GCTCATCATTTGTAAAATGACCCAGCCTGCCCTTAGCAACTTCAATTTAGCATAGACAAGGGAGAAAGAGATCTGTATATGTTTTACAAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCATTCTTTCCAAAATGTaGAATATTGGGACCATCATC +
Preference number: 2 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPILSKM*NIGTII
Trigger: GATGATGGTCCCAATATTGCACATTTTGGAAAGAAT...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR GCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCAAAAACCTCACTGAGATaGAAGGGATTGGTTTTGATT +
Preference number: 2 (lower is better)
Translates to: NENGGASFPSGQTLTWSSKTSLR*KGLVLI
Trigger: AATCAAAACCAATCCCTTGCATCTCAGTGAGGTTTT...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 90 bp ACATTTTTGTTGTTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATaGGAGCAGACTAGACAAAAGATATATGACTTACCTACACTTTCA +
Preference number: 2 (lower is better)
Translates to: TFLLLFVVLRVNSRA*EQTRQKIYDLPTLS
Trigger: TGAAAGTGTAGGTAAGTCATATATCTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAACAACAAAAATGT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR TCA 90 bp AAAACAGATTTCAATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTATCAGAGCCTTGTAAACTaGAAAATAAACTCCTCTTTG +
Preference number: 2 (lower is better)
Translates to: KTDFNVCVCVCVCVCVFYQSLVN*KINSSL
Trigger: CAAAGAGGAGTTTATTTTTCAGTTTACAAGGCTCTG...ATAAAACACACACACACACACACACACACACACACACACATTGAAATCTGTTTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR GCA 90 bp ATGACTTACCTACACTTTCAGCTCAGGAGCATTTTTGATTTATGTACATGTATGTGCCTTCCAGGTTTCTaGCATTCAAAAACAGATTTC +
Preference number: 2 (lower is better)
Translates to: MTYLHFQLRSIFDLCTCMCLPGF*HSKTDF
Trigger: GAAATCTGTTTTTGAATGGCAGAAACCTGGAAGGCA...CATACATGTACATAAATCAAAAATGCTCCTGAGCTGAAAGTGTAGGTAAGTCAT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR CAA 90 bp ATTGCTGATGGTAAGTTGTGCTCATATGAAGTTCCTTCTATGTACTaGTTAAAACTTATCAGAGAACATTCTGCCATTTGTGTCCTAAAG +
Preference number: 2 (lower is better)
Translates to: IADGKLCSYEVPSMY*LKLIREHSAICVLK
Trigger: CTTTAGGACACAAATGGCAGAATGTTCTCTGATAAGTTTTAACAAGTACATAGAAGGAACTTCATATGAGCACAACTTACCATCAGCAAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp GGGGAACTCCAGGGCCAAGAAGTGAGAGTGGGTGGTTaGGGGAGTAGGTGGAGGACCATGTGTGGGACTTTG +
Preference number: 3 (lower is better)
Translates to: GELQGQEVRVGG*GSRWRTMCGTL
Trigger: CAAAGTCCCACACATGGTCCTCCACCTACTCCCTCAACCACCCACTCTCACTTCTTGGCCCTGGAGTTCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp GAGAGAAAGAGTGCTTCCATGGGTGAAACACTTCAGTaGCTTCTGAGACCCTCTGGAGAGCAGGGTCTGGCT +
Preference number: 3 (lower is better)
Translates to: ERKSASMGETLQ*LLRPSGEQGLA
Trigger: AGCCAGACCCTGCTCTCCAGAGGGTCTCAGAAGCCACTGAAGTGTTTCACCCATGGAAGCACTCTTTCTCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp CTTCCGCTAGTAACTGCCAGCGATCACTTGTGGCTTTaGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACC +
Preference number: 3 (lower is better)
Translates to: LPLVTASDHLWL*YTERGGRREVT
Trigger: GGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTGATCGCTGGCAGTTACTAGCGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp CTATGCTGGGGCCTAGCAAACACAGAAGTCAACTATTaGACGGATCACAGGGCCCCCAATGGAGGAGCTAGA +
Preference number: 3 (lower is better)
Translates to: LCWGLANTEVNY*TDHRAPNGGAR
Trigger: TCTAGCTCCTCCATTGGGGGCCCTGTGATCCGTCCAATAGTTGACTTCTGTGTTTGCTAGGCCCCAGCATAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTTATGCTAAATTGAAGTaGCTAAGGGCAGGCTGGGTC +
Preference number: 3 (lower is better)
Translates to: SEVVAALETGDLMLQRSLYAKLK*LRAGWV
Trigger: GACCCAGCCTGCCCTTAGCAACTTCAATTTAGCATA...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp GATGCTATGGTCCAATGGAGACCCAAGGCTTTGCTTTaGACTTTCCCAGGAAGCCTGCCCTTGGAGTTGGCT +
Preference number: 3 (lower is better)
Translates to: DAMVQWRPKALL*TFPGSLPLELA
Trigger: AGCCAACTCCAAGGGCAGGCTTCCTGGGAAAGTTCAAAGCAAAGCCTTGGGTCTCCATTGGACCATAGCATC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp GACAATCTTCCGCTAGTAACTGCCAGCGATCACTTGTaGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAA +
Preference number: 3 (lower is better)
Translates to: DNLPLVTASDHL*LWYTERGGRRE
Trigger: TTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTGATCGCTGGCAGTTACTAGCGGAAGATTGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp GGGAGCATCTATGTGATGTGGTTGACCAAGTGCTTCAGGATGATACATCAACGAGGGATCCCAGGCCCATaGTGTTTCCAGGGCTGTAGG +
Preference number: 3 (lower is better)
Translates to: GSIYVMWLTKCFRMIHQRGIPGP*CFQGCR
Trigger: CCTACAGCCCTGGAAACACAATGGGCCTGGGATCCC...TCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp CCAGCGATCACTTGTGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTAGGATCCACCTTGTATTaGCTTGGAGAGCCAGTAAGG +
Preference number: 3 (lower is better)
Translates to: PAITCGFGTQSGVAEEKLGSTLY*LGEPVR
Trigger: CCTTACTGGCTCTCCAAGCAAATACAAGGTGGATCC...TAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTGATCGCTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
3UTR CCA 72 bp GAAACCCTCCATAGAAATCACTGCCCTTGTTCATGGTaGTTTGGGAGACTCTTCCATAGGTGGGCAGATGCC +
Preference number: 3 (lower is better)
Translates to: ETLHRNHCPCSW*FGRLFHRWADA
Trigger: GGCATCTGCCCACCTATGGAAGAGTCTCCCAAACCACCATGAACAAGGGCAGTGATTTCTATGGAGGGTTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp GCTGTAGGGAGCATCTATGTGATGTGGTTGACCAAGTaGTTCAGGATGATACATCAACGAGGGCAGTGGACA +
Preference number: 3 (lower is better)
Translates to: AVGSIYVMWLTK*FRMIHQRGQWT
Trigger: TGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 72 bp AATCAAGGTCTTGCAGCCTATTTAGTAGCAGTAACATaGCCAGAGCTGGACACTGAGGGCTCAGAGACTCTC +
Preference number: 3 (lower is better)
Translates to: NQGLAAYLVAVT*PELDTEGSETL
Trigger: GAGAGTCTCTGAGCCCTCAGTGTCCAGCTCTGGGCATGTTACTGCTACTAAATAGGCTGCAAGACCTTGATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp ATGACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTaGAGAGAACACTCGGGGATCACAAGAAGCCAAGCC +
Preference number: 3 (lower is better)
Translates to: MTEHKAQKQVSR*REHSGITRSQA
Trigger: GGCTTGGCTTCTTGTGATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGTCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp ACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTaGACACAAAGCCTTTCTCAGCACAGCGTTGGCAAT +
Preference number: 3 (lower is better)
Translates to: TKCFRMIHQRGQ*TQSLSQHSVGN
Trigger: ATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp GAGGTTTTCATCTACTTTGCATTCCTCAGTGGGCAATaGGTTGCCTGGCACTTCAGTCTAACAGGGACTGCA +
Preference number: 3 (lower is better)
Translates to: EVFIYFAFLSGQ*VAWHFSLTGTA
Trigger: TGCAGTCCCTGTTAGACTGAAGTGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAGTAGATGAAAACCTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATGGCTGCTATCAGGAAGGAACTGATGTCTCAGCAGCCACCAGAGAGAATGTTTACCAGGCAGGCATCCTaGAGACTAGATTATTGGCAC +
Preference number: 3 (lower is better)
Translates to: MAAIRKELMSQQPPERMFTRQAS*RLDYWH
Trigger: GTGCCAATAATCTAGTCTCAAGGATGCCTGCCTGGT...AAACATTCTCTCTGGTGGCTGCTGAGACATCAGTTCCTTCCTGATAGCAGCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp TGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGTTACTTTATCACCATGTGAAATaGGGGGAACAAGGTGGCAGA +
Preference number: 3 (lower is better)
Translates to: WLWYTERGGRREVTSQLLYHHVK*GEQGGR
Trigger: TCTGCCACCTTGTTCCCCCAATTTCACATGGTGATA...AAGTAACTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp CAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTTGACCTTTCTCAGCACAGCGTaGGCAATGTTGTTATTGGAT +
Preference number: 3 (lower is better)
Translates to: QAHCVSRAVGSIYVMWLTFLSTA*AMLLLD
Trigger: ATCCAATAACAACATTGCCAACGCTGTGCTGAGAAA...GGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTCCAGGAAGCCTGCCCTaGGAGTTGGCTTGCAGATTC +
Preference number: 3 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCPGSLP*ELACRF
Trigger: GAATCTGCAAGCCAACTCCAAGGGCAGGCTTCCTGG...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TATCATGAGAGACTGTGTCAGAGTCACTTACCAAGCTaGAGAGGCAGGCTACCATCTGTGAGAGCTGTCTTG +
Preference number: 3 (lower is better)
Translates to: YHERLCQSHLPS*RGRLPSVRAVL
Trigger: CAAGACAGCTCTCACAGATGGTAGCCTGCCTCTTCAGCTTGGTAAGTGACTCTGACACAGTCTCTCATGATA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 72 bp AGTGACCAAGGTTATAGTTGCTTTGGCCACCCAACTTaGGGTGACTCACTGACAGGAAAAACACCTGCACTC +
Preference number: 3 (lower is better)
Translates to: SDQGYSCFGHPT*GDSLTGKTPAL
Trigger: GAGTGCAGGTGTTTTTCCTGTCAGTGAGTCACCTCAAGTTGGGTGGCCAAAGCAACTATAACCTTGGTCACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TGGCCTAGTCTGCCATCAGTGGAAAGAGAGGCCCATTaGTTGTGCAAACTTTATATGCCTCAGTACAGGGGA +
Preference number: 3 (lower is better)
Translates to: WPSLPSVEREAH*LCKLYMPQYRG
Trigger: TCCCCTGTACTGAGGCATATAAAGTTTGCACAATCAATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp GGTGGATGGTTTCACAATCCACAGTCTTGCAGGAAGTaGTGTGGTAAGTTTCCCCTGTTCTTGTGCTCTTGT +
Preference number: 3 (lower is better)
Translates to: GGWFHNPQSCRK*CGKFPLFLCSC
Trigger: ACAAGAGCACAAGAACAGGGGAAACTTACCACAGCACTTCCTGCAAGACTGTGGATTGTGAAACCATCCACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR GCA 72 bp TTTCTTTTCCTTCGTCGGAGAATCTCTGAGGGCATGTaGATGTTGGGTGGAATGCTGAACTCACAAGAGGTG +
Preference number: 3 (lower is better)
Translates to: FLFLRRRISEGM*MLGGMLNSQEV
Trigger: CACCTCTTGTGAGTTCAGCATTCCACCCAACATGCACATGCCCTCAGAGATTCTCCGACGAAGGAAAAGAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp TGGAAAGAGAGGCCCATTGATTGTGCAAACTTTATATaGCTCAGTACAGGGGAACTCCAGGGCCAAGAAGTG +
Preference number: 3 (lower is better)
Translates to: WKERPIDCANFI*LSTGELQGQEV
Trigger: CACTTCTTGGCCCTGGAGTTCCCCTGTACTGAGGCATATAAAGTTTGCACAATCAATGGGCCTCTCTTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp GAGACAGAGAGACACACAGAGACAGAGAGAGACACATaGAGACAGAGCTATCACCATGTGAAATTGGGGGAA +
Preference number: 3 (lower is better)
Translates to: ETERHTETERDT*RQSYHHVKLGE
Trigger: TTCCCCCAATTTCACATGGTGATAGCTCTGTCTCCATGTGTCTCTCTCTGTCTCTGTGTGTCTCTCTGTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp TCCCTAGCTTCTCAGCTCAGCCTCCACACTTTCCCTTaGGCTTCATTTCTTATGTCCAACTTGCTCCTAACA +
Preference number: 3 (lower is better)
Translates to: SLASQLSLHTFP*ASFLMSNLLLT
Trigger: TGTTAGGAGCAAGTTGGACATAAGAAATGAAGCCCAAGGGAAAGTGTGGAGGCTGAGCTGAGAAGCTAGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp GGAGCTTTTGTCTCTAGCTGCATATGTATCAGAAGATaGCCTAGTCTGCCATCAGTGGAAAGAGAGGCCCAT +
Preference number: 3 (lower is better)
Translates to: GAFVSSCICIRR*PSLPSVEREAH
Trigger: ATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAAAAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp GTGTGTAATGTGTGCAGATGCCCATGGAGGTCAGAAGAGGGTGTTGGATTCCTTTGGGAAAATTCTGTCTaGTTCTCAGCATTTGGCCAC +
Preference number: 3 (lower is better)
Translates to: VCNVCRCPWRSEEGVGFLWENSV*FSAFGH
Trigger: GTGGCCAAATGCTGAGAACAAGACAGAATTTTCCCA...AAGGAATCCAACACCCTCTTCTGACCTCCATGGGCATCTGCACACATTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp AGACACATGGAGACAGAGCTATCACCATGTGAAATTGGGGGAACAAGGTGGCAGTGGGAAAATTCTGTCTaGTTCTCAGCATTTGGCCAC +
Preference number: 3 (lower is better)
Translates to: RHMETELSPCEIGGTRWQWENSV*FSAFGH
Trigger: GTGGCCAAATGCTGAGAACAAGACAGAATTTTCCCA...CTGCCACCTTGTTCCCCCAATTTCACATGGTGATAGCTCTGTCTCCATGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCTTCAAAGTGCACACATaGGCCTCTTCGGGGCCAGGC +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPFKVHT*ASSGPG
Trigger: GCCTGGCCCCGAAGAGGCCAATGTGTGCACTTTGAA...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCTCTGGTCTAACTGATTaGGAGATCTGGATCTCAGGT +
Preference number: 3 (lower is better)
Translates to: TEHKAQKQVSRCREHSGISGLTD*EIWISG
Trigger: ACCTGAGATCCAGATCTCCAAATCAGTTAGACCAGA...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp AGCAGAACAAATAGAGAGAAAGAGTGCTTCCATGGGTaGAACACTTCAGTGGCTTCTGAGACCCTCTGGAGA +
Preference number: 3 (lower is better)
Translates to: SRTNREKECFHG*NTSVASETLWR
Trigger: TCTCCAGAGGGTCTCAGAAGCCACTGAAGTGTTTCACCCATGGAAGCACTCTTTCTCTCTATTTGTTCTGCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 72 bp GTTTCCTTTGTTTCTTTTCCTTCGTCGGAGAATCTCTaGGGGCATGTGCATGTTGGGTGGAATGCTGAACTC +
Preference number: 3 (lower is better)
Translates to: VSFVSFPSSENL*GHVHVGWNAEL
Trigger: GAGTTCAGCATTCCACCCAACATGCACATGCCCTCAGAGATTCTCCGACGAAGGAAAAGAAACAAAGGAAAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp CTATTTAGTAGCAGTAACATGCCCAGAGCTGGACACTaGGGGCTCAGAGACTCTCCTACCAGAATCAGTATT +
Preference number: 3 (lower is better)
Translates to: LFSSSNMPRAGH*GLRDSPTRISI
Trigger: AATACTGATTCTGGTAGGAGAGTCTCTGAGCCCTCAGTGTCCAGCTCTGGGCATGTTACTGCTACTAAATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TCTTTAGGGAGAATAGCAGGCCCTGGAAAGAGGGGCTaGAAAGGCTCTAAGAATGTAGAAATGGTAAGGAGG +
Preference number: 3 (lower is better)
Translates to: SLGRIAGPGKRG*KGSKNVEMVRR
Trigger: CCTCCTTACCATTTCTACATTCTTAGAGCCTTTTCAGCCCCTCTTTCCAGGGCCTGCTATTCTCCCTAAAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp TTTCATCTACTTTGCATTCCTCAGTGGGCAATGGGTTaGCTGGCACTTCAGTCTAACAGGGACTGCATATAC +
Preference number: 3 (lower is better)
Translates to: FHLLCIPQWAMG*LALQSNRDCIY
Trigger: GTATATGCAGTCCCTGTTAGACTGAAGTGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAGTAGATGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp ACTGATTTGCAAAGCAGAGGGAGAGTGAGTCATAGATaGTATGGTCCAATGGAGACCCAAGGCTTTGCTTTG +
Preference number: 3 (lower is better)
Translates to: TDLQSRGRVSHR*YGPMETQGFAL
Trigger: CAAAGCAAAGCCTTGGGTCTCCATTGGACCATAGCATCTATGACTCACTCTCCCTCTGCTTTGCAAATCAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp CTTCTTCAGCTTGCGCATGCCTGGGAGCTTAGTGAATaGAGTACGATTCAGACTCCAATTCTCTGTGTCTTT +
Preference number: 3 (lower is better)
Translates to: LLQLAHAWELSE*STIQTPILCVF
Trigger: AAAGACACAGAGAATTGGAGTCTGAATCGTACTGCATTCACTAAGCTCCCAGGCATGCGCAAGCTGAAGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp TCTCTAGCTGCATATGTATCAGAAGATGGCCTAGTCTaGCATCAGTGGAAAGAGAGGCCCATTGATTGTGCA +
Preference number: 3 (lower is better)
Translates to: SLAAYVSEDGLV*HQWKERPIDCA
Trigger: TGCACAATCAATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp AGGGCAGTGGACACAAAGCCTTTCTCAGCACAGCGTTaGCAATGTTGTTATTGGATTGTGGAAGCATTAGGT +
Preference number: 3 (lower is better)
Translates to: RAVDTKPFSAQR*QCCYWIVEALG
Trigger: ACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp TGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTaGTTGACCAAGTGCTTCAGGATGATACATCAACGA +
Preference number: 3 (lower is better)
Translates to: CVSRAVGSIYVM*LTKCFRMIHQR
Trigger: TCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp ATCTACTTTGCATTCCTCAGTGGGCAATGGGTTGCCTaGCACTTCAGTCTAACAGGGACTGCATATACTGAT +
Preference number: 3 (lower is better)
Translates to: IYFAFLSGQWVA*HFSLTGTAYTD
Trigger: ATCAGTATATGCAGTCCCTGTTAGACTGAAGTGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAGTAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp AGGCATTTACTGTCTAAGTTAGGGGCGTGTTGGCCATaGCCCCTGGGCCTTTCAACTACAATCTTAGATTTT +
Preference number: 3 (lower is better)
Translates to: RHLLSKLGACWP*PLGLSTTILDF
Trigger: AAAATCTAAGATTGTAGTTGAAAGGCCCAGGGGCCATGGCCAACACGCCCCTAACTTAGACAGTAAATGCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCAGAGGCTGTACCTGTaGGCACCATCCCTCAAGAAT +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQQRLYL*APSLKN
Trigger: ATTCTTGAGGGATGGTGCCAACAGGTACAGCCTCTG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCTGCTTCTTCTTCAGCTaGCGCATGCCTGGGAGCTTA +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPCFFFS*RMPGSL
Trigger: TAAGCTCCCAGGCATGCGCAAGCTGAAGAAGAAGCA...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp GTGTGTAATGTGTGCAGATGCCCATGGAGGTCAGAAGAGGGTGTTGGATTCCTTAAAATAAACTCCTCTTaGTGTGTTTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: VCNVCRCPWRSEEGVGFLKINSS*CVCVCV
Trigger: CACACACACACAAACACACAAAGAGGAGTTTATTTT...AAGGAATCCAACACCCTCTTCTGACCTCCATGGGCATCTGCACACATTACACAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCTCTTTGAAGATGCAGTaGTTTCTCAGACATTCTGTA +
Preference number: 3 (lower is better)
Translates to: TEHKAQKQVSRCREHSGISLKMQ*FLRHSV
Trigger: TACAGAATGTCTGAGAAACAACTGCATCTTCAAAGA...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp GTTTCCCCTGTTCTTGTGCTCTTGTTGAGTATTCAGTaGGGAATATGTACACAGGGAATGACACTGTGGTCA +
Preference number: 3 (lower is better)
Translates to: VSPVLVLLLSIQ*GICTQGMTLWS
Trigger: TGACCACAGTGTCATTCCCTGTGTACATATTCCTCACTGAATACTCAACAAGAGCACAAGAACAGGGGAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR TCA 72 bp CCAGCCTGTCCGTCATCTTCTTGTGCTAGGCCATTTTaGCTATTTCATGCCTTCTGTCTGATGACAAATCTA +
Preference number: 3 (lower is better)
Translates to: PACPSSSCARPF*LFHAFCLMTNL
Trigger: TAGATTTGTCATCAGACAGAAGGCATGAAATAGTCAAAATGGCCTAGCACAAGAAGATGACGGACAGGCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TGCTTTCCTAAAACTTTTATCTGGACATCTGTGACGTaGGCACAGCCTGTGCCAAGATCTTGCAAATGCATG +
Preference number: 3 (lower is better)
Translates to: CFPKTFIWTSVT*AQPVPRSCKCM
Trigger: CATGCATTTGCAAGATCTTGGCACAGGCTGTGCTCACGTCACAGATGTCCAGATAAAAGTTTTAGGAAAGCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp AACCAGCTGCCTAAGAGACCATGCCTTCCAGGTTTCTaGCATTCAAAAACAGATTTCAATGTGTGTGTGTGT +
Preference number: 3 (lower is better)
Translates to: NQLPKRPCLPGF*HSKTDFNVCVC
Trigger: ACACACACACACATTGAAATCTGTTTTTGAATGGCAGAAACCTGGAAGGCATGGTCTCTTAGGCAGCTGGTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR GCA 72 bp AGCACAGGAATGTGGGTGGCTCTGCATTTTTATAATTaGCTGAAAACCTCACTGAGATGCAAGGGATTGGTT +
Preference number: 3 (lower is better)
Translates to: STGMWVALHFYN*LKTSLRCKGLV
Trigger: AACCAATCCCTTGCATCTCAGTGAGGTTTTCAGGCAATTATAAAAATGCAGAGCCACCCACATTCCTGTGCT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp TATGAACTAAATACCCCCGGAGCTTTTGTCTCTAGCTaGATATGTATCAGAAGATGGCCTAGTCTGCCATCA +
Preference number: 3 (lower is better)
Translates to: YELNTPGAFVSS*ICIRRWPSLPS
Trigger: TGATGGCAGACTAGGCCATCTTCTGATACATATGCAGCTAGAGACAAAAGCTCCGGGGGTATTTAGTTCATA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp GCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTaGACTCACAAGGACATCTTACAATTTCTCCTTTGG +
Preference number: 3 (lower is better)
Translates to: AVVEWVISVKKV*THKDILQFLLW
Trigger: CCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR-3UTR CAA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTACGGATGTAAACAATTaGGCTGGTGTCCTGGAATGT +
Preference number: 3 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCTDVNN*AGVLEC
Trigger: ACATTCCAGGACACCAGCCAAATTGTTTACATCCGT...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCTGGAAGCGTTTCCTTaGTTTCTTTTCCTTCGTCGG +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQLEAFP*FLFLRR
Trigger: CCGACGAAGGAAAAGAAACAAAGGAAACGCTTCCAG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGAGAAGTTTGAGGCTGTaGGCTCCATGTAGGAATGAG +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQRSLRL*APCRNE
Trigger: CTCATTCCTACATGGAGCCAACAGCCTCAAACTTCT...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATGGCTGCTATCAGGAAGGAACTGATGTCTCAGCAGCCACCAGAGAGAATGTTTCTTACAATTTCTCCTTaGGAAAAAGACATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: MAAIRKELMSQQPPERMFLTISP*EKDMAE
Trigger: TTCTGCCATGTCTTTTTCCAAAGGAGAAATTGTAAG...AAACATTCTCTCTGGTGGCTGCTGAGACATCAGTTCCTTCCTGATAGCAGCCAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
3UTR TCA 72 bp ATGCTTGCTTTCCTAAAACTTTTATCTGGACATCTGTaGCGTGAGCACAGCCTGTGCCAAGATCTTGCAAAT +
Preference number: 3 (lower is better)
Translates to: MLAFLKLLSGHL*REHSLCQDLAN
Trigger: ATTTGCAAGATCTTGGCACAGGCTGTGCTCACGTCACAGATGTCCAGATAAAAGTTTTAGGAAAGCAAGCAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp ACAAGAGGTGATTTCAGAGTCTCTATATCCAGTTGGTaGAAGAGAGAACTGATTTGCAAAGCAGAGGGAGAG +
Preference number: 3 (lower is better)
Translates to: TRGDFRVSISSW*KRELICKAEGE
Trigger: CTCTCCCTCTGCTTTGCAAATCAGTTCTCTCTTTCACCAACTGGATATAGAGACTCTGAAATCACCTCTTGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp CAAATGGGTGCTGAGACTTTAAAGAGTGAAACAGGATaGGCACAGGAATGTGGGTGGCTCTGCATTTTTATA +
Preference number: 3 (lower is better)
Translates to: QMGAETLKSETG*AQECGWLCIFI
Trigger: TATAAAAATGCAGAGCCACCCACATTCCTGTGCTCATCCTGTTTCACTCTTTAAAGTCTCAGCACCCATTTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp ATAGTTGCTTTGGCCACCCAACTTGAGGTGACTCACTaGCAGGAAAAACACCTGCACTCTGTGATTATTTTT +
Preference number: 3 (lower is better)
Translates to: IVALATQLEVTH*QEKHLHSVIIF
Trigger: AAAAATAATCACAGAGTGCAGGTGTTTTTCCTGTCAGTGAGTCACCTCAAGTTGGGTGGCCAAAGCAACTAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp AGTCTAACCAGGCAGGCATCCTTGAGACTAGATTATTaGCACTGGGAAAATTCTGTCTTGTTCTCAGCATTT +
Preference number: 3 (lower is better)
Translates to: SLTRQASLRLDY*HWENSVLFSAF
Trigger: AAATGCTGAGAACAAGACAGAATTTTCCCAGTGCCAATAATCTAGTCTCAAGGATGCCTGCCTGGTTAGACT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp AAGCCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTaGATTGTGGAAGCATTAGGTTTTGACTCCCACAAA +
Preference number: 3 (lower is better)
Translates to: KPFSAQRWQCCY*IVEALGFDSHK
Trigger: TTTGTGGGAGTCAAAACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CCA 72 bp GCATATGTATCAGAAGATGGCCTAGTCTGCCATCAGTaGAAAGAGAGGCCCATTGATTGTGCAAACTTTATA +
Preference number: 3 (lower is better)
Translates to: AYVSEDGLVCHQ*KERPIDCANFI
Trigger: TATAAAGTTTGCACAATCAATGGGCCTCTCTTTCCACTGATGGCAGACTAGGCCATCTTCTGATACATATGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp TTGTTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTaGGTAATTTCAGTGAAGAAGGTTTGGACTCACAAG +
Preference number: 3 (lower is better)
Translates to: LLKCNSEVAVVE*VISVKKVWTHK
Trigger: CTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATTACACTTTAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR-3UTR CAA 90 bp CTCTTCTCCAAATGTTTTCTCAGCATTGGTTTGAACAAGACATTATTGATCCCTACCAGGCAGGCATCCTaGAGACTAGATTATTGGCAC +
Preference number: 3 (lower is better)
Translates to: LFSKCFLSIGLNKTLLIPTRQAS*RLDYWH
Trigger: GTGCCAATAATCTAGTCTCAAGGATGCCTGCCTGGT...AGGGATCAATAATGTCTTGTTCAAACCAATGCTGAGAAAACATTTGGAGAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACATTTCTCAGCACAGCGTaGGCAATGTTGTTATTGGAT +
Preference number: 3 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTFLSTA*AMLLLD
Trigger: ATCCAATAACAACATTGCCAACGCTGTGCTGAGAAA...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCTGATGACAAATCTATaGCAGAGGCTGTACCTGTTG +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPLMTNL*QRLYLL
Trigger: CAACAGGTACAGCCTCTGCAATAGATTTGTCATCAG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCGGGTATTGCATGAGCTaGGACAACTTTCCCAAATAC +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPGYCMS*DNFPKY
Trigger: GTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCC...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGGATTCACTGACCCTCTaGGAGGTTGTGTGTATTTTG +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQDSLTL*EVVCIL
Trigger: CAAAATACACACAACCTCCAAGAGGGTCAGTGAATC...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCTCCTTTGGTTGTTCATaGACTGAGGATTCACCTTGG +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPSFGCS*TEDSPW
Trigger: CCAAGGTGAATCCTCAGTCAATGAACAACCAAAGGA...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCTTGTCTATGCTAAATaGAAGTTGCTAAGGGCAGGC +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQLVYAK*KLLRAG
Trigger: GCCTGCCCTTAGCAACTTCAATTTAGCATAGACAAG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp CATGAAATCTTTCCAGCCTTGAAGGGTATTTTATCATaGGAGACTGTGTCAGAGTCACTTACCAAGCTGAAG +
Preference number: 3 (lower is better)
Translates to: HEIFPALKGILS*ETVSESLTKLK
Trigger: CTTCAGCTTGGTAAGTGACTCTGACACAGTCTCTCATGATAAAATACCCTTCAAGGCTGGAAAGATTTCATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 72 bp CTCAGACATTCTGTATGGAGGATTCAGGGTATTGCATaGGCTTGGACAACTTTCCCAAATACTTCTGTTGTT +
Preference number: 3 (lower is better)
Translates to: LRHSVWRIQGIA*AWTTFPNTSVV
Trigger: AACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp AGAATAGGGAAAGCTAAAGCTTCAGAAAACCCACACTaGAGTTACAGTTGTGAACAGACAGAGCCTTGTAAA +
Preference number: 3 (lower is better)
Translates to: RIGKAKASENPH*SYSCEQTEPCK
Trigger: TTTACAAGGCTCTGTCTGTTCACAACTGTAACTGCAGTGTGGGTTTTCTGAAGCTTTAGCTTTCCCTATTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 72 bp GTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATTaGATGAGCTTGGACAACTTTCCCAAATACTTCTGT +
Preference number: 3 (lower is better)
Translates to: VSQTFCMEDSGY*MSLDNFPKYFC
Trigger: ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp GCATTTATTTGTCTCCTGGAGAAGGATAGAATGTCTTaGCAAAGAAGGTTTAGCTTGCATTGGCTTTGGTGT +
Preference number: 3 (lower is better)
Translates to: AFICLLEKDRMS*QRRFSLHWLWC
Trigger: ACACCAAAGCCAATGCAAGCTAAACCTTCTTTGCCAAGACATTCTATCCTTCTCCAGGAGACAAATAAATGC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACAAGGTAAAAATAAACTCCTCTTaGTGTGTTTGTGTGTGTGTG +
Preference number: 3 (lower is better)
Translates to: PRNDFLPENASRKQWYKVKINSS*CVCVCV
Trigger: CACACACACACAAACACACAAAGAGGAGTTTATTTT...TACCTTGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR-3UTR CAA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCATACAAGAACAGAAGTTaGAGGCTGTTGGCTCCATGT +
Preference number: 3 (lower is better)
Translates to: NENGGASFPSGQTLTWSSYKNRS*RLLAPC
Trigger: ACATGGAGCCAACAGCCTCAAACTTCTGTTCTTGTA...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTAGGTTTTCATCTACTTaGCATTCCTCAGTGGGCAAT +
Preference number: 3 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFRFSST*HSSVGN
Trigger: ATTGCCCACTGAGGAATGCAAAGTAGATGAAAACCT...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCAAGTCAGATCTCTGTCTaGGAAACCCTCCATAGAAAT +
Preference number: 3 (lower is better)
Translates to: NENGGASFPSGQTLTWSSSQISV*ETLHRN
Trigger: ATTTCTATGGAGGGTTTCCAAGACAGAGATCTGACT...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCAAAGAAGGTTTAGCTaGCATTGGCTTTGGTGTTTA +
Preference number: 3 (lower is better)
Translates to: LYVSQCFITRDRRNWREQQRRFS*HWLWCL
Trigger: TAAACACCAAAGCCAATGCAAGCTAAACCTTCTTTG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TTGTCTCTGACTGATCTTTCAATAATACCCAAGAAATaGCTTTTTACCCGAGAATGCCTCCAGGAAGCAATG +
Preference number: 3 (lower is better)
Translates to: LSLTDLSIIPKK*LFTRECLQEAM
Trigger: CATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATTATTGAAAGATCAGTCAGAGACAA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 72 bp ATGCAGTACGATTCAGACTCCAATTCTCTGTGTCTTTaGAGATGCAGTTGTTTCTCAGACATTCTGTATGGA +
Preference number: 3 (lower is better)
Translates to: MQYDSDSNSLCL*RCSCFSDILYG
Trigger: TCCATACAGAATGTCTGAGAAACAACTGCATCTTCAAAGACACAGAGAATTGGAGTCTGAATCGTACTGCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp TCATTAAGGTACAGGGACGGATGTAAACAATTTGGCTaGTGTCCTGGAATGTATTCTTTCCAAAATGTGCAA +
Preference number: 3 (lower is better)
Translates to: SLRYRDGCKQFG*CPGMYSFQNVQ
Trigger: TTGCACATTTTGGAAAGAATACATTCCAGGACACCAGCCAAATTGTTTACATCCGTCCCTGTACCTTAATGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp TCTTGTGCTCTTGTTGAGTATTCAGTGAGGAATATGTACACAGGGAATGACACTAGACATCTTACTGTTTaGGAGGGTATCTTCAGTTTT +
Preference number: 3 (lower is better)
Translates to: SCALVEYSVRNMYTGNDTRHLTV*EGIFSF
Trigger: AAAACTGAAGATACCCTCCAAAACAGTAAGATGTCT...AGTGTCATTCCCTGTGTACATATTCCTCACTGAATACTCAACAAGAGCACAAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCAGGAAACAAGTTGATTaGTTCTGGAAATCAGCTGTT +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPRKQVD*FWKSAV
Trigger: AACAGCTGATTTCCAGAACAAATCAACTTGTTTCCT...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCTGAGATGCAAGGGATaGGTTTTGATTATTCATCAA +
Preference number: 3 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPLRCKG*VLIIHQ
Trigger: TTGATGAATAATCAAAACCAATCCCTTGCATCTCAG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp TTCAGTCTAACAGGGACTGCATATACTGATAAACTTTaGATACTCACTGTAACGTTGCAGCAGAAATCACTC +
Preference number: 3 (lower is better)
Translates to: FSLTGTAYTDKL*ILTVTLQQKSL
Trigger: GAGTGATTTCTGCTGCAACGTTACAGTGAGTATTCAAAGTTTATCAGTATATGCAGTCCCTGTTAGACTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp ACCTCAGCACCCATATCACCATATGATCCTAGAGTCTaGCTTACATGGTGTCCATATAATATGAAATACATG +
Preference number: 3 (lower is better)
Translates to: TSAPISPYDPRV*LTWCPYNMKYM
Trigger: CATGTATTTCATATTATATGGACACCATGTAAGTCAGACTCTAGGATCATATGGTGATATGGGTGCTGAGGT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp AACATGCTAAGATTATCTGTGAGTCCCTTTACTCATTaGCCAGACTGTATAGATGGTTGCCTTTCTACTCTA +
Preference number: 3 (lower is better)
Translates to: NMLRLSVSPFTH*PDCIDGCLSTL
Trigger: TAGAGTAGAAAGGCAACCATCTATACAGTCTGGTCAATGAGTAAAGGGACTCACAGATAATCTTAGCATGTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp ATATGGCTTTACAGAAGGCATGATCACTCAGTGGGCTaGTTACTTTGGTTTATACAAGAGACTCTTACATTG +
Preference number: 3 (lower is better)
Translates to: IWLYRRHDHSVG*LLWFIQETLTL
Trigger: CAATGTAAGAGTCTCTTGTATAAACCAAAGTAATCAGCCCACTGAGTGATCATGCCTTCTGTAAAGCCATAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CCA 72 bp TGTTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATTaGAGCAGACTAGACAAAAGATATATGACTTACCTA +
Preference number: 3 (lower is better)
Translates to: CYLLCSESIPGH*SRLDKRYMTYL
Trigger: TAGGTAAGTCATATATCTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAACA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
3UTR CCA 72 bp CTTCAATATGGCTTTACAGAAGGCATGATCACTCAGTaGGCTGATTACTTTGGTTTATACAAGAGACTCTTA +
Preference number: 3 (lower is better)
Translates to: LQYGFTEGMITQ*ADYFGLYKRLL
Trigger: TAAGAGTCTCTTGTATAAACCAAAGTAATCAGCCCACTGAGTGATCATGCCTTCTGTAAAGCCATATTGAAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR-3UTR CAA 90 bp AAACTGAAAAATAAACTCCTCTTTGTGTGTTTGTGTGTGTGTGTGTGTGTATGTTCAAGTTCCCCTTCATaGTCCAGTTTTTGGAATCGT +
Preference number: 3 (lower is better)
Translates to: KLKNKLLFVCLCVCVCVCSSSPS*SSFWNR
Trigger: ACGATTCCAAAAACTGGACAATGAAGGGGAACTTGA...ACATACACACACACACACACACAAACACACAAAGAGGAGTTTATTTTTCAGTTT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
3UTR CCA 72 bp AATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATaGTACAAGGTAAAGACGAATTGCTATAAATTCAAT +
Preference number: 3 (lower is better)
Translates to: NDFLPENASRKQ*YKVKTNCYKFN
Trigger: ATTGAATTTATAGCAATTCGTCTTTACCTTGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR TCA 72 bp AGCATTGGTTTGAACAAGACATTATTGATCCCTTCCTaGGCCTTCTTCAAGTTCTTGTTTGTTAGTTATATC +
Preference number: 3 (lower is better)
Translates to: SIGLNKTLLIPS*AFFKFLFVSYI
Trigger: GATATAACTAACAAACAAGAACTTGAAGAAGGCTCAGGAAGGGATCAATAATGTCTTGTTCAAACCAATGCT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR GCA 72 bp TTCTATGTACTTGTTAAAACTTATCAGAGAACATTCTaGCATTTGTGTCCTAAAGTTCCATCAGCCATCCAA +
Preference number: 3 (lower is better)
Translates to: FYVLVKTYQRTF*HLCPKVPSAIQ
Trigger: TTGGATGGCTGATGGAACTTTAGGACACAAATGGCAGAATGTTCTCTGATAAGTTTTAACAAGTACATAGAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp ACAATTACATGTAGATTTACCATTTCTGGTAAGATTTaGGTGAATGAATACCCCATTTGGTGGAGTTCTGAT +
Preference number: 3 (lower is better)
Translates to: TITCRFTISGKI*VNEYPIWWSSD
Trigger: ATCAGAACTCCACCAAATGGGGTATTCATTCACTCAAATCTTACCAGAAATGGTAAATCTACATGTAATTGT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR TCA 72 bp CCAAAAATTAGAAAACTCACTTCATCCACATCCAAGTaGTTCTGTTCATTTGCATTTCAAACAACAGCAACA +
Preference number: 3 (lower is better)
Translates to: PKIRKLTSSTSK*FCSFAFQTTAT
Trigger: TGTTGCTGTTGTTTGAAATGCAAATGAACAGAATCACTTGGATGTGGATGAAGTGAGTTTTCTAATTTTTGG
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp CTATTAAAAGTCAGTGGCATTGCTGATGGTAAGTTGTaGTCATATGAAGTTCCTTCTATGTACTTGTTAAAA +
Preference number: 3 (lower is better)
Translates to: LLKVSGIADGKL*SYEVPSMYLLK
Trigger: TTTTAACAAGTACATAGAAGGAACTTCATATGAGCACAACTTACCATCAGCAATGCCACTGACTTTTAATAG
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR GCA 72 bp GTGTCTGTGTGGAGAGTTAACAATTGGTTCATCTTATaGAGAGTCAAATCATTGTTTGTAGGTAATTTCTTT +
Preference number: 3 (lower is better)
Translates to: VSVWRVNNWFIL*RVKSLFVGNFF
Trigger: AAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGATGAACCAATTGTTAACTCTCCACACAGACAC
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp GCTGGGATCCCAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGGGGAGTCCTCCATCTaGCCCAGGATTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: AGIPGPLCFQGCREHLCDGESSI*PRIPPA
Trigger: TGCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCC...ATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTGGGATCCCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTCTACTCCAGTATCCATaGTCTGGCTTGCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLLLQYP*SGLQRV
Trigger: GACTCGCTGCAAGCCAGACCATGGATACTGGAGTAG...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTGGATGTTGTTATCCGTaGCCCCAGATACCTTGGCAT +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLGCCYP*PQIPWH
Trigger: ATGCCAAGGTATCTGGGGTCACGGATAACAACATCC...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CACTTGTGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGCCAGTATCCATGGTCTaGCTTGCAGCGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: HLWLWYTERGGRREVTSQPVSMV*LAASLD
Trigger: GTCCAGACTCGCTGCAAGCCAGACCATGGATACTGG...CTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTGACCCGGATACTCTTTaGAATGGGATGGCATTAGCC +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLDPDTL*NGMALA
Trigger: GGCTAATGCCATCCCATTCCAAAGAGTATCCGGGTC...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTGCACTCCGTCTTTGTTaGCTTTGTGAATCTCCACGT +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLALRLC*LCESPR
Trigger: ACGTGGAGATTCACAAAGTCAACAAAGACGGAGTGC...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTTGGAACCTTCTTGGCTaGTTCCTCAAGCAAAGCTGT +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLWNLLG*FLKQSC
Trigger: ACAGCTTTGCTTGAGGAATCAGCCAAGAAGGTTCCA...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTTGACCTGGCCCCGGAACTGGTaGAAAGATGCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: QAHCVSRAVGSIYVMWLTWPRNW*KDAGHH
Trigger: ATGATGACCTGCATCTTTCCACCAGTTCCGGGGCCA...GGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp CACTTGTGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGTGGCCCCGGAACTGGTaGAAAGATGCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: HLWLWYTERGGRREVTSQWPRNW*KDAGHH
Trigger: ATGATGACCTGCATCTTTCCACCAGTTCCGGGGCCA...CTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp GCTGGGATCCCAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATTTTTGGCCCCGGAACTaGTGGAAAGATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: AGIPGPLCFQGCREHLCDFWPRN*WKDAGH
Trigger: ATGACCTGCATCTTTCCACCAGTTCCGGGGCCAAAA...ATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTGGGATCCCAGC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp AGAGACACATGGAGACAGAGCTATCACCATGTGAAATaGGGGGAACAAGGTGGCAGAAGGCTGAGGCTGAGC +
Preference number: 4 (lower is better)
Translates to: RDTWRQSYHHVK*GEQGGRRLRLS
Trigger: GCTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAATTTCACATGGTGATAGCTCTGTCTCCATGTGTCTCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp TCTTCCGCTAGTAACTGCCAGCGATCACTTGTGGCTTaGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTAC +
Preference number: 4 (lower is better)
Translates to: SSASNCQRSLVA*VHRAGWQKRSY
Trigger: GTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTGATCGCTGGCAGTTACTAGCGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp AGATGCTATGGTCCAATGGAGACCCAAGGCTTTGCTTaGAACTTTCCCAGGAAGCCTGCCCTTGGAGTTGGC +
Preference number: 4 (lower is better)
Translates to: RCYGPMETQGFA*NFPRKPALGVG
Trigger: GCCAACTCCAAGGGCAGGCTTCCTGGGAAAGTTCAAAGCAAAGCCTTGGGTCTCCATTGGACCATAGCATCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TGGAATCGTCCAGGAAGGGCCAGGCGTGGATCCACCTaGTATTTGCTTGGAGAGCCAGTAAGGACATCTTAC +
Preference number: 4 (lower is better)
Translates to: WNRPGRARRGST*YLLGEPVRTSY
Trigger: GTAAGATGTCCTTACTGGCTCTCCAAGCAAATACAAGGTGGATCCACGCCTGGCCCTTCCTGGACGATTCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
CDS-3UTR TCA 90 bp AATTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTGGACTGGGGAGTCCTCCATCTaGCCCAGGATTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: NSEVAVVEWVISVKKVWTGESSI*PRIPPA
Trigger: TGCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCC...AGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTATGTCAATGAATAATTaGTGGGGAGTCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: SEVVAALETGDLMLQRSLMSMNN*WGVLHL
Trigger: CAGATGGAGGACTCCCCACCAATTATTCATTGACAT...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CAGGCCCATTGTGTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTTGACCCACATCCACATAAAGTaGATCCGAGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: QAHCVSRAVGSIYVMWLTHIHIK*IRGTAS
Trigger: GGAAGCAGTACCTCGGATCCACTTTATGTGGATGTG...GGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAACACAATGGGCCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCTGGCCCCGGAACTGGTaGAAAGATGCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIWPRNW*KDAGHH
Trigger: ATGATGACCTGCATCTTTCCACCAGTTCCGGGGCCA...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCAGCAAAGCTGTGTTCTaGGCTCGTGAGTCTGGCACT +
Preference number: 4 (lower is better)
Translates to: TEHKAQKQVSRCREHSGISKAVF*ARESGT
Trigger: AGTGCCAGACTCACGAGCCCAGAACACAGCTTTGCT...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp CGTCCAGGAAGGGCCAGGCGTGGATCCACCTTGTATTaGCTTGGAGAGCCAGTAAGGACATCTTACAATTTC +
Preference number: 4 (lower is better)
Translates to: RPGRARRGSTLY*LGEPVRTSYNF
Trigger: GAAATTGTAAGATGTCCTTACTGGCTCTCCAAGCAAATACAAGGTGGATCCACGCCTGGCCCTTCCTGGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
CDS-3UTR TCA 90 bp ATAGGGAAAGCTAAAGCTTCAGAAAACCCACACTGCAGTTACAGTTGTGAACAGGGGGAGTCCTCCATCTaGCCCAGGATTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: IGKAKASENPHCSYSCEQGESSI*PRIPPA
Trigger: TGCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCC...CTGTTCACAACTGTAACTGCAGTGTGGGTTTTCTGAAGCTTTAGCTTTCCCTAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp AATTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTGGACTCCAGTATCCATGGTCTaGCTTGCAGCGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NSEVAVVEWVISVKKVWTPVSMV*LAASLD
Trigger: GTCCAGACTCGCTGCAAGCCAGACCATGGATACTGG...AGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
3UTR CAA 72 bp GTTTCCAGGGCTGTAGGGAGCATCTATGTGATGTGGTaGACCAAGTGCTTCAGGATGATACATCAACGAGGG +
Preference number: 4 (lower is better)
Translates to: VSRAVGSIYVMW*TKCFRMIHQRG
Trigger: CCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCCTACAGCCCTGGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp TTTTCCATCTGGGTGAAGAGCTTCAAAGTGCACACATaGGCCTCTTCGGGGCCAGGCATACAATTCAGTGTC +
Preference number: 4 (lower is better)
Translates to: FSIWVKSFKVHT*ASSGPGIQFSV
Trigger: GACACTGAATTGTATGCCTGGCCCCGAAGAGGCCAATGTGTGCACTTTGAAGCTCTTCACCCAGATGGAAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAGGGGAGTCCTCCATCTaGCCCAGGATTCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRGESSI*PRIPPA
Trigger: TGCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCC...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGTTCCGAGGAGGCTCTaGTTCAACAATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIVPRRL*FNNVSH
Trigger: GTGACTTACATTGTTGAACCAGAGCCTCCTCGGAAC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp TGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGTTACTTGTTCCGAGGAGGCTCTaGTTCAACAATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: WLWYTERGGRREVTSQLLVPRRL*FNNVSH
Trigger: GTGACTTACATTGTTGAACCAGAGCCTCCTCGGAAC...AAGTAACTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp ATTGGCACTGGGAAAATTCTGTCTTGTTCTCAGCATTaGGCCACGATGGTGGTGGAACCCATTTTGAGAGGC +
Preference number: 4 (lower is better)
Translates to: IGTGKILSCSQH*ATMVVEPILRG
Trigger: GCCTCTCAAAATGGGTTCCACCACCATCGTGGCCAAATGCTGAGAACAAGACAGAATTTTCCCAGTGCCAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp GAGGGCAGTGGACACAAAGCCTTTCTCAGCACAGCGTaGGCAATGTTGTTATTGGATTGTGGAAGCATTAGG +
Preference number: 4 (lower is better)
Translates to: EGSGHKAFLSTA*AMLLLDCGSIR
Trigger: CCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGGCTTTGTGTCCACTGCCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp GACATCTGTGACGTGAGCACAGCCTGTGCCAAGATCTaGCAAATGCATGAATTCCAAGGAGATGCTGACGTT +
Preference number: 4 (lower is better)
Translates to: DICDVSTACAKI*QMHEFQGDADV
Trigger: AACGTCAGCATCTCCTTGGAATTCATGCATTTGCAAGATCTTGGCACAGGCTGTGCTCACGTCACAGATGTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TTCCTTCGTCGGAGAATCTCTGAGGGCATGTGCATGTaGGGTGGAATGCTGAACTCACAAGAGGTGATTTCA +
Preference number: 4 (lower is better)
Translates to: FLRRRISEGMCM*GGMLNSQEVIS
Trigger: TGAAATCACCTCTTGTGAGTTCAGCATTCCACCCAACATGCACATGCCCTCAGAGATTCTCCGACGAAGGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp TGCTTGTTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: CLLKCNSEVAVVEWVISVRFSRW*LSIQEA
Trigger: AGCCTCCTGAATGGACAGTCACCACCTGGAAAACCT...CACTGAAATTACCCACTCGACCACAGCCACCTCTGAATTACACTTTAACAAGCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR GCA 90 bp ACTCAAGCCCAGAGAAGCGTGAAGCGAGTGGGAGGGAGACAATCTTCCGCTAGTCATATGGAAGTGTACTaGTTGCTAAAGAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: TQAQRSVKRVGGRQSSASHMEVY*LLKKQE
Trigger: TTCCTGTTTCTTTAGCAAGCAGTACACTTCCATATG...ACTAGCGGAAGATTGTCTCCCTCCCACTCGCTTCACGCTTCTCTGGGCTTGAGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR GCA 90 bp GCCACGATGGTGGTGGAACCCATTTTGAGAGGCTCATATTTGAGTCTGCTGCTTACCCTTCAAAGCCACTaGCCAGACCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: ATMVVEPILRGSYLSLLLTLQSH*PDHNQT
Trigger: TGTTTGATTATGGTCTGGGCAGTGGCTTTGAAGGGT...AAGCAGCAGACTCAAATATGAGCCTCTCAAAATGGGTTCCACCACCATCGTGGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp TGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGTTACTTAGGAATTGGGGCCACTaGTTTTGTAGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: WLWYTERGGRREVTSQLLRNWGH*FCSLDI
Trigger: AATGTCCAGACTACAAAACCAGTGGCCCCAATTCCT...AAGTAACTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp ATCATGAGAGACTGTGTCAGAGTCACTTACCAAGCTGAAGAGGCAGGCTACCATCACATCCACATAAAGTaGATCCGAGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: IMRDCVRVTYQAEEAGYHHIHIK*IRGTAS
Trigger: GGAAGCAGTACCTCGGATCCACTTTATGTGGATGTG...ATGGTAGCCTGCCTCTTCAGCTTGGTAAGTGACTCTGACACAGTCTCTCATGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp TTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTGGACTCAGTTCCGAGGAGGCTCTaGTTCAACAATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: FRGGCGRVGNFSEEGLDSVPRRL*FNNVSH
Trigger: GTGACTTACATTGTTGAACCAGAGCCTCCTCGGAAC...TGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACACCAGTATCCATGGTCTaGCTTGCAGCGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTPVSMV*LAASLD
Trigger: GTCCAGACTCGCTGCAAGCCAGACCATGGATACTGG...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp GAAGCTATAAACTGCTTGTTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTGGCTACTCCAGTATCCATaGTCTGGCTTGCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: EAINCLLKCNSEVAVVEWLLQYP*SGLQRV
Trigger: GACTCGCTGCAAGCCAGACCATGGATACTGGAGTAG...CCACTCGACCACAGCCACCTCTGAATTACACTTTAACAAGCAGTTTATAGCTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp CTAAAGCTTCAGAAAACCCACACTGCAGTTACAGTTGTGAACAGACAGAGCCTTCTACTCCAGTATCCATaGTCTGGCTTGCAGCGAGTC +
Preference number: 4 (lower is better)
Translates to: LKLQKTHTAVTVVNRQSLLLQYP*SGLQRV
Trigger: GACTCGCTGCAAGCCAGACCATGGATACTGGAGTAG...AAGGCTCTGTCTGTTCACAACTGTAACTGCAGTGTGGGTTTTCTGAAGCTTTAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp TTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTACCAGTCAGTTACTTATTGTTTTGGCCCCGGAACTaGTGGAAAGATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: FGTQSGVAEEKLPVSYLLFWPRN*WKDAGH
Trigger: ATGACCTGCATCTTTCCACCAGTTCCGGGGCCAAAA...CAATAAGTAACTGACTGGTAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR TCA 90 bp AATACCCAAGAAATGACTTTTTACCCGAGAATGCCTCCAGGAAGCAATGGTACAAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: NTQEMTFYPRMPPGSNGTRFSRW*LSIQEA
Trigger: AGCCTCCTGAATGGACAGTCACCACCTGGAAAACCT...TGTACCATTGCTTCCTGGAGGCATTCTCGGGTAAAAAGTCATTTCTTGGGTATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR GCA 90 bp GAGCTATCACCATGTGAAATTGGGGGAACAAGGTGGCAGAAGGCTGAGGCTGAGCATATGGAAGTGTACTaGTTGCTAAAGAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: ELSPCEIGGTRWQKAEAEHMEVY*LLKKQE
Trigger: TTCCTGTTTCTTTAGCAAGCAGTACACTTCCATATG...CTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAATTTCACATGGTGATAGCTC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR GCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCCAGGTAATCCAGCCTaGCCAGTTGGAGTCTGCAGT +
Preference number: 4 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPPGNPA*PVGVCS
Trigger: ACTGCAGACTCCAACTGGGCAGGCTGGATTACCTGG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
47% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ACCAAGCTGAAGAGGCAGGCTACCATCTGTGAGAGCTGTCTTGTCTATCTTTCCATGTCAATGAATAATTaGTGGGGAGTCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: TKLKRQATICESCLVYLSMSMNN*WGVLHL
Trigger: CAGATGGAGGACTCCCCACCAATTATTCATTGACAT...GGAAAGATAGACAAGACAGCTCTCACAGATGGTAGCCTGCCTCTTCAGCTTGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp TTGACCAAGTGCTTCAGGATGATACATCAACGAGGGCAGTGGACACAAAGCCTTAGGAATTGGGGCCACTaGTTTTGTAGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: LTKCFRMIHQRGQWTQSLRNWGH*FCSLDI
Trigger: AATGTCCAGACTACAAAACCAGTGGCCCCAATTCCT...AAGGCTTTGTGTCCACTGCCCTCGTTGATGTATCATCCTGAAGCACTTGGTCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCCAGTATCCATGGTCTaGCTTGCAGCGAGTCTGGAC +
Preference number: 4 (lower is better)
Translates to: LYVSQCFITRDRRNWREQPVSMV*LAASLD
Trigger: GTCCAGACTCGCTGCAAGCCAGACCATGGATACTGG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGACCTCACAGTCAGAAGTaGGGGGAAAGTCTTGGCACC +
Preference number: 4 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRPHSQK*GESLGT
Trigger: GGTGCCAAGACTTTCCCCCCACTTCTGACTGTGAGG...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCGTTATTTTGGGGATTTaGGGTGGGAGGAATATTTGC +
Preference number: 4 (lower is better)
Translates to: TEHKAQKQVSRCREHSGIVILGI*GGRNIC
Trigger: GCAAATATTCCTCCCACCCCAAATCCCCAAAATAAC...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGGATCTGCGCGTGTGTTaGCCAGGTGGTAAAGGCCAT +
Preference number: 4 (lower is better)
Translates to: LYVSQCFITRDRRNWREQDLRVC*PGGKGH
Trigger: ATGGCCTTTACCACCTGGCCAACACACGCGCAGATC...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRRFSRW*LSIQEA
Trigger: AGCCTCCTGAATGGACAGTCACCACCTGGAAAACCT...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAGATTCCACCAGCAGGTaGATGTTTCCTTGTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRDSTSR*MFPCQG
Trigger: CCCCTGACAAGGAAACATTCACCTGCTGGTGGAATC...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp AATTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTGGACTGGGGAACGACATTTGTaGATTTCAGGTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: NSEVAVVEWVISVKKVWTGERHL*ISGFPG
Trigger: ACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCC...AGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp GGGAGCATCTATGTGATGTGGTTGACCAAGTGCTTCAGGATGATACATCAACGAGGGGAACGACATTTGTaGATTTCAGGTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: GSIYVMWLTKCFRMIHQRGERHL*ISGFPG
Trigger: ACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCC...TCGTTGATGTATCATCCTGAAGCACTTGGTCAACCACATCACATAGATGCTCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp CTAAAGCTTCAGAAAACCCACACTGCAGTTACAGTTGTGAACAGACAGAGCCTTGTTCCGAGGAGGCTCTaGTTCAACAATGTAAGTCAC +
Preference number: 4 (lower is better)
Translates to: LKLQKTHTAVTVVNRQSLVPRRL*FNNVSH
Trigger: GTGACTTACATTGTTGAACCAGAGCCTCCTCGGAAC...AAGGCTCTGTCTGTTCACAACTGTAACTGCAGTGTGGGTTTTCTGAAGCTTTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTTTTTGGCCCCGGAACTaGTGGAAAGATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCFWPRN*WKDAGH
Trigger: ATGACCTGCATCTTTCCACCAGTTCCGGGGCCAAAA...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGCAGAAGGGAAGCTTTTaGCCCCTTCTTGCACAGCCA +
Preference number: 4 (lower is better)
Translates to: LYVSQCFITRDRRNWREQQKGSF*PLLAQP
Trigger: TGGCTGTGCAAGAAGGGGCCAAAAGCTTCCCTTCTG...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCATCCAGCCTGCCCAGTTaGAGTCTGCAGTTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: NENGGASFPSGQTLTWSSSSLPS*SLQLLE
Trigger: CTCAAGCAACTGCAGACTCCAACTGGGCAGGCTGGA...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TGTCTGATGACAAATCTATTGCAGAGGCTGTACCTGTaGGCACCATCCCTCAAGAATAGTAAGCGATGTGCT +
Preference number: 4 (lower is better)
Translates to: CLMTNLLQRLYL*APSLKNSKRCA
Trigger: AGCACATCGCTTACTATTCTTGAGGGATGGTGCCAACAGGTACAGCCTCTGCAATAGATTTGTCATCAGACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp GAACACTCGGGGATCACAAGAAGCCAAGCCAAAGGGTaGACATTTCAACCACTGGTGAATTGTACTGTAAAC +
Preference number: 4 (lower is better)
Translates to: EHSGITRSQAKG*TFQPLVNCTVN
Trigger: GTTTACAGTACAATTCACCAGTGGTTGAAATGTCAACCCTTTGGCTTGGCTTCTTGTGATCCCCGAGTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CCTTTCTCAGCACAGCGTTGGCAATGTTGTTATTGGATTGTGGAAGCATTAGGTGGGGAACGACATTTGTaGATTTCAGGTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: PFSAQRWQCCYWIVEALGGERHL*ISGFPG
Trigger: ACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCC...ACCTAATGCTTCCACAATCCAATAACAACATTGCCAACGCTGTGCTGAGAAAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGTGCCTCAGGATTCTCTaGCTTCTCAGTGATCTCAGG +
Preference number: 4 (lower is better)
Translates to: LYVSQCFITRDRRNWREQCLRIL*LLSDLR
Trigger: CCTGAGATCACTGAGAAGCCAGAGAATCCTGAGGCA...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TGTTGGCTCCATGTAGGAATGAGCATGGCTAAAGACTaGTGTCTCATCTCCTGTGTCTTTCTTAGCGCTATA +
Preference number: 4 (lower is better)
Translates to: CWLHVGMSMAKD*CLISCVFLSAI
Trigger: TATAGCGCTAAGAAAGACACAGGAGATGAGACACAAGTCTTTAGCCATGCTCATTCCTACATGGAGCCAACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp GGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTaGGACTCACAAGGACATCTTACAATTTCTCCTTTG +
Preference number: 4 (lower is better)
Translates to: GCGRVGNFSEEG*DSQGHLTISPL
Trigger: CAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR GCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTATCCATGGTCTGGCTTaGAGCGAGTCTGGACAAGAT +
Preference number: 4 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFIHGLA*SESGQD
Trigger: ATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGAT...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR GCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACTTTTGGCCCCTTCTTaGACAGCCACTTCTTCCTCT +
Preference number: 4 (lower is better)
Translates to: NENGGASFPSGQTLTWSSLLAPS*TATSSS
Trigger: AGAGGAAGAAGTGGCTGTGCAAGAAGGGGCCAAAAG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ATGGAGGATTCAGGGTATTGCATGAGCTTGGACAACTTTCCCAAATACTTCTGTTCAATGAATAATTGGTaGGGAGTCCTCCATCTGACC +
Preference number: 4 (lower is better)
Translates to: MEDSGYCMSLDNFPKYFCSMNNW*GVLHLT
Trigger: GGTCAGATGGAGGACTCCCCACCAATTATTCATTGA...ACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp AGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATTGGCCCCGGAACTGGTaGAAAGATGCAGGTCATCAT +
Preference number: 4 (lower is better)
Translates to: RRFGLTRTSYNFSFGKRHWPRNW*KDAGHH
Trigger: ATGATGACCTGCATCTTTCCACCAGTTCCGGGGCCA...ATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp ACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATGGCAGAAACCTTTTTGGCCCCGGAACTaGTGGAAAGATGCAGGTCAT +
Preference number: 4 (lower is better)
Translates to: THKDILQFLLWKKTWQKPFWPRN*WKDAGH
Trigger: ATGACCTGCATCTTTCCACCAGTTCCGGGGCCAAAA...AGGTTTCTGCCATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCAGGATACTCTTTGGAATaGGATGGCATTAGCCGCTCG +
Preference number: 4 (lower is better)
Translates to: NENGGASFPSGQTLTWSSGYSLE*DGISRS
Trigger: CGAGCGGCTAATGCCATCCCATTCCAAAGAGTATCC...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTGCCTTTCTCCTGGAGTaGTGGCCAAGATGTGTTTTG +
Preference number: 4 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFAFLLE*WPRCVL
Trigger: CAAAACACATCTTGGCCACCACTCCAGGAGAAAGGC...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTGGGTTTTCTGTCTGGTaGTTTTCTCTCTGCTTGGGG +
Preference number: 4 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFGFSVW*FSLCLG
Trigger: CCCCAAGCAGAGAGAAAACCACCAGACAGAAAACCC...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTTGGCATACTCCTTACTaGTTTCAGGAACCCCAGGGT +
Preference number: 4 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFWHTPY*FQEPQG
Trigger: ACCCTGGGGTTCCTGAAACCAGTAAGGAGTATGCCA...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp AAGTCTAACCAGGCAGGCATCCTTGAGACTAGATTATaGGCACTGGGAAAATTCTGTCTTGTTCTCAGCATT +
Preference number: 4 (lower is better)
Translates to: KSNQAGILETRL*ALGKFCLVLSI
Trigger: AATGCTGAGAACAAGACAGAATTTTCCCAGTGCCAATAATCTAGTCTCAAGGATGCCTGCCTGGTTAGACTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp TTACTCTATTGTACTCAATTGAGGTTTTCATCTACTTaGCATTCCTCAGTGGGCAATGGGTTGCCTGGCACT +
Preference number: 4 (lower is better)
Translates to: LLYCTQLRFSST*HSSVGNGLPGT
Trigger: AGTGCCAGGCAACCCATTGCCCACTGAGGAATGCAAAGTAGATGAAAACCTCAATTGAGTACAATAGAGTAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR TCA 90 bp ATGACTTACCTACACTTTCAGCTCAGGAGCATTTTTGATTTATGTACATGTATGAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCT +
Preference number: 4 (lower is better)
Translates to: MTYLHFQLRSIFDLCTCMRFSRW*LSIQEA
Trigger: AGCCTCCTGAATGGACAGTCACCACCTGGAAAACCT...CATACATGTACATAAATCAAAAATGCTCCTGAGCTGAAAGTGTAGGTAAGTCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS-3UTR GCA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAACCCTTCAAAGCCACTaGCCAGACCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRTLQSH*PDHNQT
Trigger: TGTTTGATTATGGTCTGGGCAGTGGCTTTGAAGGGT...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCGGGGAACGACATTTGTaGATTTCAGGTTTTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPGERHL*ISGFPG
Trigger: ACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCC...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCAGGAATTGGGGCCACTaGTTTTGTAGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPRNWGH*FCSLDI
Trigger: AATGTCCAGACTACAAAACCAGTGGCCCCAATTCCT...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACACATCCACATAAAGTaGATCCGAGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: NENGGASFPSGQTLTWSSHIHIK*IRGTAS
Trigger: GGAAGCAGTACCTCGGATCCACTTTATGTGGATGTG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTCCAGGGTTTTCTGTCTaGTGGTTTTCTCTCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFPGFSV*WFSLCL
Trigger: CAAGCAGAGAGAAAACCACCAGACAGAAAACCCTGG...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp AGTCTCTATATCCAGTTGGTGAAAGAGAGAACTGATTaGCAAAGCAGAGGGAGAGTGAGTCATAGATGCTAT +
Preference number: 4 (lower is better)
Translates to: SLYIQLVKERTD*QSRGRVSHRCY
Trigger: ATAGCATCTATGACTCACTCTCCCTCTGCTTTGCAAATCAGTTCTCTCTTTCACCAACTGGATATAGAGACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TGTTTCTCAGACATTCTGTATGGAGGATTCAGGGTATaGCATGAGCTTGGACAACTTTCCCAAATACTTCTG +
Preference number: 4 (lower is better)
Translates to: CFSDILYGGFRV*HELGQLSQILL
Trigger: CAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGTCTGAGAAACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TGCCTGAAAACCTCACTGAGATGCAAGGGATTGGTTTaGATTATTCATCAAGCCACAGAATCAAGAAGACTG +
Preference number: 4 (lower is better)
Translates to: CLKTSLRCKGLV*IIHQATESRRL
Trigger: CAGTCTTCTTGATTCTGTGGCTTGATGAATAATCAAAACCAATCCCTTGCATCTCAGTGAGGTTTTCAGGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp CAGATCTCTTTCTCCCTTGTCTATGCTAAATTGAAGTaGCTAAGGGCAGGCTGGGTCATTTTACAAATGATG +
Preference number: 4 (lower is better)
Translates to: QISFSLVYAKLK*LRAGWVILQMM
Trigger: CATCATTTGTAAAATGACCCAGCCTGCCCTTAGCAACTTCAATTTAGCATAGACAAGGGAGAAAGAGATCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CCA 90 bp CTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATGGCAGAAACCTTAGGAATTGGGGCCACTaGTTTTGTAGTCTGGACATT +
Preference number: 4 (lower is better)
Translates to: LTRTSYNFSFGKRHGRNLRNWGH*FCSLDI
Trigger: AATGTCCAGACTACAAAACCAGTGGCCCCAATTCCT...AAGGTTTCTGCCATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp AGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATCACATCCACATAAAGTaGATCCGAGGTACTGCTTCC +
Preference number: 4 (lower is better)
Translates to: RRFGLTRTSYNFSFGKRHHIHIK*IRGTAS
Trigger: GGAAGCAGTACCTCGGATCCACTTTATGTGGATGTG...ATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR GCA 90 bp TTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGCATATGGAAGTGTACTaGTTGCTAAAGAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: LKCNSEVAVVEWVISVKKHMEVY*LLKKQE
Trigger: TTCCTGTTTCTTTAGCAAGCAGTACACTTCCATATG...CTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAATTACACTTTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR GCA 90 bp AGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATACCCTTCAAAGCCACTaGCCAGACCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: RRFGLTRTSYNFSFGKRHTLQSH*PDHNQT
Trigger: TGTTTGATTATGGTCTGGGCAGTGGCTTTGAAGGGT...ATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp ACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATGGCAGAAACCTATGTCAATGAATAATTaGTGGGGAGTCCTCCATCTG +
Preference number: 4 (lower is better)
Translates to: THKDILQFLLWKKTWQKPMSMNN*WGVLHL
Trigger: CAGATGGAGGACTCCCCACCAATTATTCATTGACAT...AGGTTTCTGCCATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CCA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGAGATCTTTCTCAGATTaGTTCTGTTCAAGCGATGGT +
Preference number: 4 (lower is better)
Translates to: LYVSQCFITRDRRNWREQRSFSD*FCSSDG
Trigger: ACCATCGCTTGAACAGAACCAATCTGAGAAAGATCT...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp ACATTCTGTATGGAGGATTCAGGGTATTGCATGAGCTaGGACAACTTTCCCAAATACTTCTGTTGTTCACAA +
Preference number: 4 (lower is better)
Translates to: TFCMEDSGYCMS*DNFPKYFCCSQ
Trigger: TTGTGAACAACAGAAGTATTTGGGAAAGTTGTCCAAGCTCATGCAATACCCTGAATCCTCCATACAGAATGT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp CATATACAGATCTCTTTCTCCCTTGTCTATGCTAAATaGAAGTTGCTAAGGGCAGGCTGGGTCATTTTACAA +
Preference number: 4 (lower is better)
Translates to: HIQISFSLVYAK*KLLRAGWVILQ
Trigger: TTGTAAAATGACCCAGCCTGCCCTTAGCAACTTCAATTTAGCATAGACAAGGGAGAAAGAGATCTGTATATG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR GCA 90 bp TTGTTAGTTATATCATCCTACAGCCTCACAGTAAAGACATCTTACTGTTTTGGAACCCTTCAAAGCCACTaGCCAGACCATAATCAAACA +
Preference number: 4 (lower is better)
Translates to: LLVISSYSLTVKTSYCFGTLQSH*PDHNQT
Trigger: TGTTTGATTATGGTCTGGGCAGTGGCTTTGAAGGGT...TCCAAAACAGTAAGATGTCTTTACTGTGAGGCTGTAGGATGATATAACTAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
3UTR CAA 72 bp TTGTTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATaGGAGCAGACTAGACAAAAGATATATGACTTACCT +
Preference number: 4 (lower is better)
Translates to: LLFVVLRVNSRA*EQTRQKIYDLP
Trigger: AGGTAAGTCATATATCTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS-3UTR GCA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACATATGGAAGTGTACTaGTTGCTAAAGAAACAGGAA +
Preference number: 4 (lower is better)
Translates to: NENGGASFPSGQTLTWSSHMEVY*LLKKQE
Trigger: TTCCTGTTTCTTTAGCAAGCAGTACACTTCCATATG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp TATAATTGCCTGAAAACCTCACTGAGATGCAAGGGATaGGTTTTGATTATTCATCAAGCCACAGAATCAAGA +
Preference number: 4 (lower is better)
Translates to: YNCLKTSLRCKG*VLIIHQATESR
Trigger: TCTTGATTCTGTGGCTTGATGAATAATCAAAACCAATCCCTTGCATCTCAGTGAGGTTTTCAGGCAATTATA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp GTACTTGTTAAAACTTATCAGAGAACATTCTGCCATTaGTGTCCTAAAGTTCCATCAGCCATCCAAATGAAT +
Preference number: 4 (lower is better)
Translates to: VLVKTYQRTFCH*CPKVPSAIQMN
Trigger: ATTCATTTGGATGGCTGATGGAACTTTAGGACACAAATGGCAGAATGTTCTCTGATAAGTTTTAACAAGTAC
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp CATCTATTAAAAGTCAGTGGCATTGCTGATGGTAAGTaGTGCTCATATGAAGTTCCTTCTATGTACTTGTTA +
Preference number: 4 (lower is better)
Translates to: HLLKVSGIADGK*CSYEVPSMYLL
Trigger: TAACAAGTACATAGAAGGAACTTCATATGAGCACAACTTACCATCAGCAATGCCACTGACTTTTAATAGATG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
3UTR CAA 72 bp GGTAAGTTGTGCTCATATGAAGTTCCTTCTATGTACTaGTTAAAACTTATCAGAGAACATTCTGCCATTTGT +
Preference number: 4 (lower is better)
Translates to: GKLCSYEVPSMY*LKLIREHSAIC
Trigger: ACAAATGGCAGAATGTTCTCTGATAAGTTTTAACAAGTACATAGAAGGAACTTCATATGAGCACAACTTACC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS TCA 90 bp AGGATCCAGGTAATCCAGCCTGCCCAGTTGGAGTCTGCAGTTGCTTaGGGTTGCAGTAAAGCTGGCCAGATCTTTCTCAGATTGGTTCTG +
Preference number: 5 (lower is better)
Translates to: RIQVIQPAQLESAVA*GCSKAGQIFLRLVL
Trigger: CAGAACCAATCTGAGAAAGATCTGGCCAGCTTTACTGCAACCTCAAGCAACTGCAGACTCCAACTGGGCAGGCTGGATTACCTGGATCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS TCA 90 bp CAGGAGGCTGATGCTGAGGACAAGCAGCATGTAAGCAAGTGCAGATaGCATGTTTTGCTTCAGGCTGGCCCTTCTTCTTGCTACAGGCAA +
Preference number: 5 (lower is better)
Translates to: QEADAEDKQHVSKCR*HVLLQAGPSSCYRQ
Trigger: TTGCCTGTAGCAAGAAGAAGGGCCAGCCTGAAGCAAAACATGTCATCTGCACTTGCTTACATGCTGCTTGTCCTCAGCATCAGCCTCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127467.3
CDS GCA 90 bp TGTCCAAGAAAGAGTCCAGTGTATCTCCAGGACTTCCAGCTAGCTTaGACACATCGGCAATGCTGTGGTAAGGAGATCTGCGCGTGTGTT +
Preference number: 5 (lower is better)
Translates to: CPRKSPVYLQDFQLA*THRQCCGKEICACV
Trigger: AACACACGCGCAGATCTCCTTACCACAGCATTGCCGATGTGTGCAAGCTAGCTGGAAGTCCTGGAGATACACTGGACTCTTTCTTGGACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp AGCGAGGTAGTGGCAGCTCTGGAGACAGGGGACCTTATGCTACAGCGGAGTCTTACATTTTCCTCTGCTTaGTCCAAGAAAGAGTCCAGT +
Preference number: 5 (lower is better)
Translates to: SEVVAALETGDLMLQRSLTFSSA*SKKESS
Trigger: ACTGGACTCTTTCTTGGACAAAGCAGAGGAAAATGT...AAGACTCCGCTGTAGCATAAGGTCCCCTGTCTCCAGAGCTGCCACTACCTCGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS TCA 90 bp CTTGTCAGGGGAACGACATTTGTGGATTTCAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCTGATGCTGAGGACAAGCAGCATGTA +
Preference number: 5 (lower is better)
Translates to: LVRGTTFVDFRFSRW*LSIQEADAEDKQHV
Trigger: TACATGCTGCTTGTCCTCAGCATCAGCCTCCTGAATGGACAGTCACCACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGACAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS TCA 90 bp AATTGGTGGGGAGTCCTCCATCTGACCCAGGATTCCACCAGCAGGTaGATGTTTCCTTGTCAGGGGAACGACATTTGTGGATTTCAGGTT +
Preference number: 5 (lower is better)
Translates to: NWWGVLHLTQDSTSR*MFPCQGNDICGFQV
Trigger: AACCTGAAATCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCCACCAATT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 90 bp TTCCACCAGCAGGTGAATGTTTCCTTGTCAGGGGAACGACATTTGTaGATTTCAGGTTTTCCAGGTGGTGACTGTCCATTCAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: FHQQVNVSLSGERHL*ISGFPGGDCPFRRL
Trigger: CAGCCTCCTGAATGGACAGTCACCACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 90 bp CAAGCAGCATGTAAGCAAGTGCAGATGACATGTTTTGCTTCAGGCTaGCCCTTCTTCTTGCTACAGGCAATAGATCAGAGGCTCCCTGGA +
Preference number: 5 (lower is better)
Translates to: QAACKQVQMTCFASG*PFFLLQAIDQRLPG
Trigger: TCCAGGGAGCCTCTGATCTATTGCCTGTAGCAAGAAGAAGGGCCAGCCTGAAGCAAAACATGTCATCTGCACTTGCTTACATGCTGCTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127467.3
CDS-3UTR CAA 90 bp TTCAGAGGTGGCTGTGGTCGAGTGGGTAATTTCAGTGAAGAAGGTTTGGACTCATATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: FRGGCGRVGNFSEEGLDSYPWSG*QRVWTR
Trigger: TCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATA...TGAGTCCAAACCTTCTTCACTGAAATTACCCACTCGACCACAGCCACCTCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CAA 90 bp TGTAATGTGTGCAGATGCCCATGGAGGTCAGAAGAGGGTGTTGGATTCCTTGAATATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: CNVCRCPWRSEEGVGFLEYPWSG*QRVWTR
Trigger: TCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATA...TTCAAGGAATCCAACACCCTCTTCTGACCTCCATGGGCATCTGCACACATTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp TGTGAAATTGGGGGAACAAGGTGGCAGAAGGCTGAGGCTGAGCTAAAAGAAAGCCCACCTTGTATTTGCTaGGAGAGCCAGTCTCTAGCA +
Preference number: 5 (lower is better)
Translates to: CEIGGTRWQKAEAELKESPPCIC*ESQSLA
Trigger: TGCTAGAGACTGGCTCTCCAAGCAAATACAAGGTGG...GCTTTCTTTTAGCTCAGCCTCAGCCTTCTGCCACCTTGTTCCCCCAATTTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS CCA 90 bp GATCTTTCTCAGATTGGTTCTGTTCAAGCGATGGTGGAACCTTCTTaGCTGATTCCTCAAGCAAAGCTGTGTTCTGGGCTCGTGAGTCTG +
Preference number: 5 (lower is better)
Translates to: DLSQIGSVQAMVEPS*LIPQAKLCSGLVSL
Trigger: CAGACTCACGAGCCCAGAACACAGCTTTGCTTGAGGAATCAGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTGAGAAAGATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCACTAACACCAGGATGTaGTTATCCGTGACCCCAGAT +
Preference number: 5 (lower is better)
Translates to: TEHKAQKQVSRCREHSGITNTRM*LSVTPD
Trigger: ATCTGGGGTCACGGATAACAACATCCTGGTGTTAGT...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS GCA 90 bp TTTGGAATCGTCCAGGAAGGGCCAGGCGTGGATCCACCTTGTATTTaGTTGGAGAGCCAGTCTCTAGCAGATGAGTATCAAATCCTTTTA +
Preference number: 5 (lower is better)
Translates to: FGIVQEGPGVDPPCI*LESQSLADEYQILL
Trigger: TAAAAGGATTTGATACTCATCTGCTAGAGACTGGCTCTCCAAGCAAATACAAGGTGGATCCACGCCTGGCCCTTCCTGGACGATTCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS CCA 90 bp CCGAGGAGGCTCTGGTTCAACAATGTAAGTCACATCCACATAAAGTaGATCCGAGGTACTGCTTCCCATTTCGTTCGTGGCATTTACTGT +
Preference number: 5 (lower is better)
Translates to: PRRLWFNNVSHIHIK*IRGTASHFVRGIYC
Trigger: ACAGTAAATGCCACGAACGAAATGGGAAGCAGTACCTCGGATCCACTTTATGTGGATGTGACTTACATTGTTGAACCAGAGCCTCCTCGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 90 bp GGTATTTCAATAGATTTCTCCTGGCCCCATCTACTCCAGTATCCATaGTCTGGCTTGCAGCGAGTCTGGACAAGATACTTTTGTCCTGGA +
Preference number: 5 (lower is better)
Translates to: GISIDFSWPHLLQYP*SGLQRVWTRYFCPG
Trigger: TCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGGAGAAATCTATTGAAATACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 90 bp CAGTTGCTTGAGGTTGCAGTAAAGCTGGCCAGATCTTTCTCAGATTaGTTCTGTTCAAGCGATGGTGGAACCTTCTTGGCTGATTCCTCA +
Preference number: 5 (lower is better)
Translates to: QLLEVAVKLARSFSD*FCSSDGGTFLADSS
Trigger: TGAGGAATCAGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTGAGAAAGATCTGGCCAGCTTTACTGCAACCTCAAGCAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp ACAGAGCACAAAGCACAAAAGCAAGTCTCAAGGTGCAGAGAACACTCGGGGATCTCAGGGGAACGACATTaGTGGATTTCAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: TEHKAQKQVSRCREHSGISGERH*WISGFP
Trigger: TGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGA...GATCCCCGAGTGTTCTCTGCACCTTGAGACTTGCTTTTGTGCTTTGTGCTCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GTGTGTAATGTGTGCAGATGCCCATGGAGGTCAGAAGAGGGTGTTGGATTCCTTTCAGGGGAACGACATTaGTGGATTTCAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: VCNVCRCPWRSEEGVGFLSGERH*WISGFP
Trigger: TGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGA...AAGGAATCCAACACCCTCTTCTGACCTCCATGGGCATCTGCACACATTACACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp AGACACATGGAGACAGAGCTATCACCATGTGAAATTGGGGGAACAAGGTGGCAGTCAGGGGAACGACATTaGTGGATTTCAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: RHMETELSPCEIGGTRWQSGERH*WISGFP
Trigger: TGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGA...CTGCCACCTTGTTCCCCCAATTTCACATGGTGATAGCTCTGTCTCCATGTGTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp CCAGCGATCACTTGTGGCTTTGGTACACAGAGCGGGGTGGCAGAAGAGAAGTTAAACCTTAAATTGTGTTaGATGACCTGTGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: PAITCGFGTQSGVAEEKLNLKLC*MTCEVD
Trigger: ATCCACTTCACAGGTCATCAAACACAATTTAAGGTT...TAACTTCTCTTCTGCCACCCCGCTCTGTGTACCAAAGCCACAAGTGATCGCTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp TGGGAGGGAGACAATCTTCCGCTAGTAACTGCCAGCGATCACTTGTGGCTTTGGGACATAATTTTCAAGTaGCTCTTTGTTGTGAACCTC +
Preference number: 5 (lower is better)
Translates to: WEGDNLPLVTASDHLWLWDIIFK*LFVVNL
Trigger: GAGGTTCACAACAAAGAGCAACTTGAAAATTATGTC...CCAAAGCCACAAGTGATCGCTGGCAGTTACTAGCGGAAGATTGTCTCCCTCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGATATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRYPWSG*QRVWTR
Trigger: TCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATA...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGAGGGTGGGAGGAATATTaGCCTCAGGATTCTCTGGCT +
Preference number: 5 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRGWEEY*PQDSLA
Trigger: AGCCAGAGAATCCTGAGGCAAATATTCCTCCCACCC...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTGCTTTTGGCCCCTTCTaGCACAGCCACTTCTTCCTC +
Preference number: 5 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFAFGPF*HSHFFL
Trigger: GAGGAAGAAGTGGCTGTGCAAGAAGGGGCCAAAAGC...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GCCACGATGGTGGTGGAACCCATTTTGAGAGGCTCATATTTGAGTCTGCTGCTTAACCTTAAATTGTGTTaGATGACCTGTGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: ATMVVEPILRGSYLSLLLNLKLC*MTCEVD
Trigger: ATCCACTTCACAGGTCATCAAACACAATTTAAGGTT...AAGCAGCAGACTCAAATATGAGCCTCTCAAAATGGGTTCCACCACCATCGTGGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGGTGACCCCAGATACCTaGGCATACTCCTTACTGGTT +
Preference number: 5 (lower is better)
Translates to: LYVSQCFITRDRRNWREQVTPDT*AYSLLV
Trigger: AACCAGTAAGGAGTATGCCAAGGTATCTGGGGTCAC...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp ATCTTATGCAGAGTCAAATCATTGTTTGTAGGTAATTTCTTTCCCGCAGACCCCCAGGTGAATGTTTCCTaGTCAGGGGAACGACATTTG +
Preference number: 5 (lower is better)
Translates to: ILCRVKSLFVGNFFPADPQVNVS*SGERHL
Trigger: CAAATGTCGTTCCCCTGACAAGGAAACATTCACCTG...GGGGTCTGCGGGAAAGAAATTACCTACAAACAATGATTTGACTCTGCATAAGAT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp AAACTGAAAAATAAACTCCTCTTTGTGTGTTTGTGTGTGTGTGTGTGTGTATGTTATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGA +
Preference number: 5 (lower is better)
Translates to: KLKNKLLFVCLCVCVCVCYPWSG*QRVWTR
Trigger: TCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATA...ACATACACACACACACACACACAAACACACAAAGAGGAGTTTATTTTTCAGTTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000128921.8
ENSMUST00000137867.8
CDS-3UTR CAA 90 bp GTGTCTCAACTCCTAGTGTGCCTTCTTTTATTCAAGCAGCTGTCTTTCAATAGATGGCCAAGATGTGTTTaGTTTGTCAGAAGGGAAGCT +
Preference number: 5 (lower is better)
Translates to: VSQLLVCLLLFKQLSFNRWPRCV*FVRREA
Trigger: AGCTTCCCTTCTGACAAACAAAACACATCTTGGCCA...TCTATTGAAAGACAGCTGCTTGAATAAAAGAAGGCACACTAGGAGTTGAGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTGATGGTGGAACCTTCTaGGCTGATTCCTCAAGCAAA +
Preference number: 5 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFDGGTF*ADSSSK
Trigger: TTTGCTTGAGGAATCAGCCAAGAAGGTTCCACCATC...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp TTATTTGTTGTGCTCAGAGTCAATTCCAGGGCATTGGAGCAGACTAGACAAAAGTCAAGTTCCCCTTCATaGTCCAGTTTTTGGAATCGT +
Preference number: 5 (lower is better)
Translates to: LFVVLRVNSRALEQTRQKSSSPS*SSFWNR
Trigger: ACGATTCCAAAAACTGGACAATGAAGGGGAACTTGA...CTTTTGTCTAGTCTGCTCCAATGCCCTGGAATTGACTCTGAGCACAACAAATAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS-3UTR CAA 90 bp GAAGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACTCAGGGGAACGACATTaGTGGATTTCAGGTTTTCCA +
Preference number: 5 (lower is better)
Translates to: EEGLDSQGHLTISPLEKDSGERH*WISGFP
Trigger: TGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGA...GTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCTTC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CAA 90 bp GAAGCTATAAACTGCTTGTTAAAGTGTAATTCAGAGGTGGCTGTGGTCGAGTGGAACCTTAAATTGTGTTaGATGACCTGTGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: EAINCLLKCNSEVAVVEWNLKLC*MTCEVD
Trigger: ATCCACTTCACAGGTCATCAAACACAATTTAAGGTT...CCACTCGACCACAGCCACCTCTGAATTACACTTTAACAAGCAGTTTATAGCTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS-3UTR CAA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCATGGTTTTCTCTCTGCTaGGGGAGTAATGATAGCACT +
Preference number: 5 (lower is better)
Translates to: NENGGASFPSGQTLTWSSWFSLC*GSNDST
Trigger: AGTGCTATCATTACTCCCCAAGCAGAGAGAAAACCA...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp AATGAAAATGGAGGAGCTAGTTTTCCATCAGGACAAACTTTAACCTGGAGTTCACAGATCTTTCTCAGATaGGTTCTGTTCAAGCGATGG +
Preference number: 5 (lower is better)
Translates to: NENGGASFPSGQTLTWSSQIFLR*VLFKRW
Trigger: CCATCGCTTGAACAGAACCAATCTGAGAAAGATCTG...TGAACTCCAGGTTAAAGTTTGTCCTGATGGAAAACTAGCTCCTCCATTTTCATT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp TTGTTAGTTATATCATCCTACAGCCTCACAGTAAAGACATCTTACTGTTTTGGAGGATCCACCTTGTATTaGCTTGGAGAGCCAGTCTCT +
Preference number: 5 (lower is better)
Translates to: LLVISSYSLTVKTSYCFGGSTLY*LGEPVS
Trigger: AGAGACTGGCTCTCCAAGCAAATACAAGGTGGATCC...TCCAAAACAGTAAGATGTCTTTACTGTGAGGCTGTAGGATGATATAACTAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS-3UTR CAA 90 bp CTCTATGTGTCTCAATGCTTTATAACTCGAGATAGAAGGAATTGGCGTGAACAGAACCTTAAATTGTGTTaGATGACCTGTGAAGTGGAT +
Preference number: 5 (lower is better)
Translates to: LYVSQCFITRDRRNWREQNLKLC*MTCEVD
Trigger: ATCCACTTCACAGGTCATCAAACACAATTTAAGGTT...CTGTTCACGCCAATTCCTTCTATCTCGAGTTATAAAGCATTGAGACACATAGAG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp GCTTTAATTTTACACATGCAACATGGGCTTGACTGTTTTCCACCAAACTGGTTTCAAGATGTGTTTTGTTaGTCAGAAGGGAAGCTTTTG +
Preference number: 5 (lower is better)
Translates to: ALILHMQHGLDCFPPNWFQDVFC*SEGKLL
Trigger: CAAAAGCTTCCCTTCTGACAAACAAAACACATCTTG...AAACCAGTTTGGTGGAAAACAGTCAAGCCCATGTTGCATGTGTAAAATTAAAGC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS-3UTR CAA 90 bp AGAAGGTTTGGACTCACAAGGACATCTTACAATTTCTCCTTTGGAAAAAGACATGACATAATTTTCAAGTaGCTCTTTGTTGTGAACCTC +
Preference number: 5 (lower is better)
Translates to: RRFGLTRTSYNFSFGKRHDIIFK*LFVVNL
Trigger: GAGGTTCACAACAAAGAGCAACTTGAAAATTATGTC...ATGTCTTTTTCCAAAGGAGAAATTGTAAGATGTCCTTGTGAGTCCAAACCTTCT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000128450.8
CDS GCA 72 bp CTCCAGGACTTCCAGCTAGCTTGCACACATCGGCAATaGTGTGGTAAGGAGATCTGCGCGTGTGTTGGCCAG +
Preference number: 6 (lower is better)
Translates to: LQDFQLACTHRQ*CGKEICACVGQ
Trigger: CTGGCCAACACACGCGCAGATCTCCTTACCACAGCATTGCCGATGTGTGCAAGCTAGCTGGAAGTCCTGGAG
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS TCA 72 bp GGAGTCCTCCATCTGACCCAGGATTCCACCAGCAGGTaGATGTTTCCTTGTCAGGGGAACGACATTTGTGGA +
Preference number: 6 (lower is better)
Translates to: GVLHLTQDSTSR*MFPCQGNDICG
Trigger: TCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAATCCTGGGTCAGATGGAGGACTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS GCA 72 bp CCTGGCCCCATCTACTCCAGTATCCATGGTCTGGCTTaGAGCGAGTCTGGACAAGATACTTTTGTCCTGGAT +
Preference number: 6 (lower is better)
Translates to: PGPIYSSIHGLA*SESGQDTFVLD
Trigger: ATCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS GCA 72 bp GTCCAGGAAGGGCCAGGCGTGGATCCACCTTGTATTTaGTTGGAGAGCCAGTCTCTAGCAGATGAGTATCAA +
Preference number: 6 (lower is better)
Translates to: VQEGPGVDPPCI*LESQSLADEYQ
Trigger: TTGATACTCATCTGCTAGAGACTGGCTCTCCAAGCAAATACAAGGTGGATCCACGCCTGGCCCTTCCTGGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS CAA 72 bp TCCTGGCCCCATCTACTCCAGTATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGATACTTTTGTCCTGGA +
Preference number: 6 (lower is better)
Translates to: SWPHLLQYPWSG*QRVWTRYFCPG
Trigger: TCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CAA 72 bp TTCTGGGCTCGTGAGTCTGGCACTAACACCAGGATGTaGTTATCCGTGACCCCAGATACCTTGGCATACTCC +
Preference number: 6 (lower is better)
Translates to: FWARESGTNTRM*LSVTPDTLAYS
Trigger: GGAGTATGCCAAGGTATCTGGGGTCACGGATAACAACATCCTGGTGTTAGTGCCAGACTCACGAGCCCAGAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CCA 72 bp TTTCTCCTGGCCCCATCTACTCCAGTATCCATGGTCTaGCTTGCAGCGAGTCTGGACAAGATACTTTTGTCC +
Preference number: 6 (lower is better)
Translates to: FLLAPSTPVSMV*LAASLDKILLS
Trigger: GGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGGAGAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CAA 72 bp TCTTTGGAATGGGATGGCATTAGCCGCTCGTCCTCATaGTCATCCACTTCCAAGAACTCCACCAGCAAGTCC +
Preference number: 6 (lower is better)
Translates to: SLEWDGISRSSS*SSTSKNSTSKS
Trigger: GGACTTGCTGGTGGAGTTCTTGGAAGTGGATGACAATGAGGACGAGCGGCTAATGCCATCCCATTCCAAAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CAA 72 bp AACACCAGGATGTTGTTATCCGTGACCCCAGATACCTaGGCATACTCCTTACTGGTTTCAGGAACCCCAGGG +
Preference number: 6 (lower is better)
Translates to: NTRMLLSVTPDT*AYSLLVSGTPG
Trigger: CCCTGGGGTTCCTGAAACCAGTAAGGAGTATGCCAAGGTATCTGGGGTCACGGATAACAACATCCTGGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CAA 90 bp AGTCCTCCATCTGACCCAGGATTCCACCAGCAGGTGAATGTTTCCTaGTCAGGGGAACGACATTTGTGGATTTCAGGTTTTCCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: SPPSDPGFHQQVNVS*SGERHLWISGFPGG
Trigger: ACCACCTGGAAAACCTGAAATCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAATCCTGGGTCAGATGGAGGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CAA 90 bp AAAGCTGTGTTCTGGGCTCGTGAGTCTGGCACTAACACCAGGATGTaGTTATCCGTGACCCCAGATACCTTGGCATACTCCTTACTGGTT +
Preference number: 6 (lower is better)
Translates to: KAVFWARESGTNTRM*LSVTPDTLAYSLLV
Trigger: AACCAGTAAGGAGTATGCCAAGGTATCTGGGGTCACGGATAACAACATCCTGGTGTTAGTGCCAGACTCACGAGCCCAGAACACAGCTTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS TCA 72 bp GGAACGACATTTGTGGATTTCAGGTTTTCCAGGTGGTaGCTGTCCATTCAGGAGGCTGATGCTGAGGACAAG +
Preference number: 6 (lower is better)
Translates to: GTTFVDFRFSRW*LSIQEADAEDK
Trigger: CTTGTCCTCAGCATCAGCCTCCTGAATGGACAGTCACCACCTGGAAAACCTGAAATCCACAAATGTCGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp CAGATTGGTTCTGTTCAAGCGATGGTGGAACCTTCTTaGCTGATTCCTCAAGCAAAGCTGTGTTCTGGGCTC +
Preference number: 6 (lower is better)
Translates to: QIGSVQAMVEPS*LIPQAKLCSGL
Trigger: GAGCCCAGAACACAGCTTTGCTTGAGGAATCAGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CCA 72 bp TCTCTCCTTCTTTGCTGTATGTCAATGAATAATTGGTaGGGAGTCCTCCATCTGACCCAGGATTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: SLLLCCMSMNNW*GVLHLTQDSTS
Trigger: GCTGGTGGAATCCTGGGTCAGATGGAGGACTCCCCACCAATTATTCATTGACATACAGCAAAGAAGGAGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp ATAGATTTCTCCTGGCCCCATCTACTCCAGTATCCATaGTCTGGCTTGCAGCGAGTCTGGACAAGATACTTT +
Preference number: 6 (lower is better)
Translates to: IDFSWPHLLQYP*SGLQRVWTRYF
Trigger: AAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGGAGAAATCTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp GGGTTTAGCATAGACAATGGGGCCTTTCTCCTGGAGTaGTGGCCAAGATGTGTTTTGTTTGTCAGAAGGGAA +
Preference number: 6 (lower is better)
Translates to: GFSIDNGAFLLE*WPRCVLFVRRE
Trigger: TTCCCTTCTGACAAACAAAACACATCTTGGCCACCACTCCAGGAGAAAGGCCCCATTGTCTATGCTAAACCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CCA 72 bp GAGGTTGCAGTAAAGCTGGCCAGATCTTTCTCAGATTaGTTCTGTTCAAGCGATGGTGGAACCTTCTTGGCT +
Preference number: 6 (lower is better)
Translates to: EVAVKLARSFSD*FCSSDGGTFLA
Trigger: AGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTGAGAAAGATCTGGCCAGCTTTACTGCAACCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CAA 72 bp TCAGATTGGTTCTGTTCAAGCGATGGTGGAACCTTCTaGGCTGATTCCTCAAGCAAAGCTGTGTTCTGGGCT +
Preference number: 6 (lower is better)
Translates to: SDWFCSSDGGTF*ADSSSKAVFWA
Trigger: AGCCCAGAACACAGCTTTGCTTGAGGAATCAGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CAA 90 bp AGATCTTTCTCAGATTGGTTCTGTTCAAGCGATGGTGGAACCTTCTaGGCTGATTCCTCAAGCAAAGCTGTGTTCTGGGCTCGTGAGTCT +
Preference number: 6 (lower is better)
Translates to: RSFSDWFCSSDGGTF*ADSSSKAVFWARES
Trigger: AGACTCACGAGCCCAGAACACAGCTTTGCTTGAGGAATCAGCCAAGAAGGTTCCACCATCGCTTGAACAGAACCAATCTGAGAAAGATCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CAA 90 bp GGAATCGTCCAGGAAGGGCCAGGCGTGGATCCACCTTGTATTTGCTaGGAGAGCCAGTCTCTAGCAGATGAGTATCAAATCCTTTTATTT +
Preference number: 6 (lower is better)
Translates to: GIVQEGPGVDPPCIC*ESQSLADEYQILLF
Trigger: AAATAAAAGGATTTGATACTCATCTGCTAGAGACTGGCTCTCCAAGCAAATACAAGGTGGATCCACGCCTGGCCCTTCCTGGACGATTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000128921.8
CDS CAA 90 bp ATAGATTTCTCCTGGCCCCATCTACTCCAGTATCCATGGTCTGGCTaGCAGCGAGTCTGGACAAGATACTTTTGTCCTGGATATAAGTCA +
Preference number: 6 (lower is better)
Translates to: IDFSWPHLLQYPWSG*QRVWTRYFCPGYKS
Trigger: TGACTTATATCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAGATGGGGCCAGGAGAAATCTAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp TCCGTCTTTGTTGACTTTGTGAATCTCCACGTAATCTaGGGGTTTAGCATAGACAATGGGGCCTTTCTCCTG +
Preference number: 6 (lower is better)
Translates to: SVFVDFVNLHVI*GFSIDNGAFLL
Trigger: CAGGAGAAAGGCCCCATTGTCTATGCTAAACCCCCAGATTACGTGGAGATTCACAAAGTCAACAAAGACGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8
CDS CCA 72 bp TGTAAGCAAGTGCAGATGACATGTTTTGCTTCAGGCTaGCCCTTCTTCTTGCTACAGGCAATAGATCAGAGG +
Preference number: 6 (lower is better)
Translates to: CKQVQMTCFASG*PFFLLQAIDQR
Trigger: CCTCTGATCTATTGCCTGTAGCAAGAAGAAGGGCCAGCCTGAAGCAAAACATGTCATCTGCACTTGCTTACA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000127467.3
CDS CAA 72 bp TCTGACCCAGGATTCCACCAGCAGGTGAATGTTTCCTaGTCAGGGGAACGACATTTGTGGATTTCAGGTTTT +
Preference number: 6 (lower is better)
Translates to: SDPGFHQQVNVS*SGERHLWISGF
Trigger: AAAACCTGAAATCCACAAATGTCGTTCCCCTGACAAGGAAACATTCACCTGCTGGTGGAATCCTGGGTCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp TTTTCTCTCCTTCTTTGCTGTATGTCAATGAATAATTaGTGGGGAGTCCTCCATCTGACCCAGGATTCCACC +
Preference number: 6 (lower is better)
Translates to: FSLLLCCMSMNN*WGVLHLTQDST
Trigger: GGTGGAATCCTGGGTCAGATGGAGGACTCCCCACCAATTATTCATTGACATACAGCAAAGAAGGAGAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 8 transcripts:
ENSMUST00000124470.8
ENSMUST00000127467.3
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000130720.8
ENSMUST00000134410.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CCA 72 bp CTACTCCAGTATCCATGGTCTGGCTTGCAGCGAGTCTaGACAAGATACTTTTGTCCTGGATATAAGTCAAAA +
Preference number: 6 (lower is better)
Translates to: LLQYPWSGLQRV*TRYFCPGYKSK
Trigger: TTTTGACTTATATCCAGGACAAAAGTATCTTGTCCAGACTCGCTGCAAGCCAGACCATGGATACTGGAGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000124470.8
ENSMUST00000128450.8
ENSMUST00000128921.8
ENSMUST00000137867.8
ENSMUST00000148257.8
CDS CAA 72 bp GCATCTTCAGACAACTTTAGAACATTTTCCTCTGCTTaGTCCAAGAAAGAGTCCAGTGTATCTCCAGGACTT +
Preference number: 6 (lower is better)
Translates to: ASSDNFRTFSSA*SKKESSVSPGL
Trigger: AAGTCCTGGAGATACACTGGACTCTTTCTTGGACAAAGCAGAGGAAAATGTTCTAAAGTTGTCTGAAGATGC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000124470.8