Pregenerated sensors for PRLHR (Mus musculus)
Ensembl gene IDs: ENSMUSG00000045052Ensembl transcript IDs: ENSMUST00000051277.4
Found 62 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTaGTCCAAAGCCCACCTAACATTTCACAGAAACACAAAAACCAGA | + |
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Preference number: 1 (lower is better) Translates to: GRPDKSASLSLPRLF*SKAHLTFHRNTKTR Trigger: TCTGGTTTTTGTGTTTCTGTGAAATGTTAGGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| 3UTR CCA 90 bp | CCTAACATTTCACAGAAACACAAAAACCAGACAAATCAAAAGGGCTaGGTGGGAATTCGCATGTGTTGGCTTAACTTTGGTGCTGGGAAT | + |
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Preference number: 1 (lower is better) Translates to: PNISQKHKNQTNQKG*VGIRMCWLNFGAGN Trigger: ATTCCCAGCACCAAAGTTAAGCCAACACATGCGAATTCCCACCCAGCCCTTTTGATTTGTCTGGTTTTTGTGTTTCTGTGAAATGTTAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| 3UTR GCA 72 bp | GATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTaGTCCAAAGCCCACCTAACATTTCACAGAAACACA | + |
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Preference number: 3 (lower is better) Translates to: DKSASLSLPRLF*SKAHLTFHRNT Trigger: TGTGTTTCTGTGAAATGTTAGGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | AGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCCACAGGCGGCACACATaGGCACGTCGGACAAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: RGRPDKSASLSLPRLFCSHRRHT*ARRTRP Trigger: TGGCCTTGTCCGACGTGCTCATGTGTGCCGCCTGTG...GGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | TTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCGACTCTGGGTCACGCTaGCAGGCACCACGCGGTTCC | + |
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Preference number: 4 (lower is better) Translates to: FRGRPDKSASLSLPRLFCDSGSR*QAPRGS Trigger: GGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTC...GCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCGGTCCCAGTCAGCTTaGCTCTGGGTCACGCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: RPDKSASLSLPRLFCSKARSQSA*LWVTLP Trigger: TGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCG...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | GTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCAGCAGACAGAAAGTaGGGCGGCGACGCGCTCGGT | + |
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Preference number: 4 (lower is better) Translates to: VDLINLLLSLSPGSSAPKPADRK*GGDALG Trigger: ACCGAGCGCGTCGCCGCCGCACTTTCTGTCTGCTGG...CTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | CTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCACCCAGAGGCTCACGTCGTaGGGCTTGAGCTCCACATGG | + |
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Preference number: 4 (lower is better) Translates to: LINLLLSLSPGSSAPKPTQRLTS*GLSSTW Trigger: CCATGTGGAGCTCAAGCCCCACGACGTGAGCCTCTG...GGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | CTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCACCGTCATGTTCTGGCCATaGGGCACAATCTTGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LINLLLSLSPGSSAPKPTVMFWP*GTILRG Trigger: GCCCCGCAAGATTGTGCCTCATGGCCAGAACATGAC...GGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | GTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGAGCTGGTGCACCAGCTaGAGGCTCTGGAACGGCGTG | + |
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Preference number: 4 (lower is better) Translates to: VDLINLLLSLSPGSSAPKSWCTS*RLWNGV Trigger: CACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCT...CTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | CTTTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGGGGGAGCAAATAGGTaGCCAGAAGCAGCCCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LSGVDLINLLLSLSPGSSGGANR*PEAAPR Trigger: CCTGGGGGCTGCTTCTGGGCACCTATTTGCTCCCCC...AGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAAAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCGCAGCCATGCATAGATaGAGGGGTTGTAGCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: RPDKSASLSLPRLFCSKAAAMHR*RGCSRR Trigger: CCGCCTGCTACAACCCCTTCATCTATGCATGGCTGC...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCATGAGGCACAATCTTaGGGGGCCAGGACAGCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RPDKSASLSLPRLFCSKAHEAQS*GARTAA Trigger: TGCTGCTGTCCTGGCCCCGCAAGATTGTGCCTCATG...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | GTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGACCAGCTGCAGGCTCTaGAACGGCGTGACTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VDLINLLLSLSPGSSAPKTSCRL*NGVTAA Trigger: TGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGT...CTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | CTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCACCCCGATACATAGACGGTaGCCGGCTGCAGGAAGAAAA | + |
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Preference number: 4 (lower is better) Translates to: LINLLLSLSPGSSAPKPTPIHRR*PAAGRK Trigger: TTTTCTTCCTGCAGCCGGTCACCGTCTATGTATCGG...GGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | CTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCCACCTGGAGTCGAGCTAGCTaGCAACAGCCCAGAAGACAA | + |
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Preference number: 4 (lower is better) Translates to: LINLLLSLSPGSSAPKPTWSRAS*QQPRRQ Trigger: TTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCA...GGTGGGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | CTTTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTATCAACCCCTTCAGCTaGTGCACCAGCTGCAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LSGVDLINLLLSLSPGSSINPFS*CTSCRL Trigger: GAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGAT...AGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCAGGAAGAAAACCAGATaGCACAGGCCTCCACCGAAC | + |
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Preference number: 4 (lower is better) Translates to: RPDKSASLSLPRLFCSKARKKTR*HRPPPN Trigger: GTTCGGTGGAGGCCTGTGTCATCTGGTTTTCTTCCT...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCGCTGTCGTGCAGCCATaGATAGATGAAGGGGTTGTA | + |
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Preference number: 4 (lower is better) Translates to: RPDKSASLSLPRLFCSKAAVVQP*IDEGVV Trigger: TACAACCCCTTCATCTATGCATGGCTGCACGACAGC...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR GCA 90 bp | GTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGAATAGGTTGAAAATGTaGAGCGGCAGCCAGCAGACC | + |
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Preference number: 4 (lower is better) Translates to: VDLINLLLSLSPGSSAPKNRLKM*SGSQQT Trigger: GGTCTGCTGGCTGCCGCTGCACATTTTCAACCTATT...CTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | ACACAAAAACCAGACAAATCAAAAGGGCTGGGTGGGAATTCGCATGTGTTGGCTAATCGGGGTCTCCAGTaGTCTCAGTGGACAGTGAGG | + |
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Preference number: 4 (lower is better) Translates to: TQKPDKSKGLGGNSHVLANRGLQ*SQWTVR Trigger: CCTCACTGTCCACTGAGACCACTGGAGACCCCGATT...AGCCAACACATGCGAATTCCCACCCAGCCCTTTTGATTTGTCTGGTTTTTGTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | AACACAAAAACCAGACAAATCAAAAGGGCTGGGTGGGAATTCGCATGTGTTGGCCGTAAGACAGGAGGATaGCCAGCAGGGGGAGCAAAT | + |
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Preference number: 4 (lower is better) Translates to: NTKTRQIKRAGWEFACVGRKTGG*PAGGAN Trigger: ATTTGCTCCCCCTGCTGGCCATCCTCCTGTCTTACG...GCCAACACATGCGAATTCCCACCCAGCCCTTTTGATTTGTCTGGTTTTTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CCA 90 bp | AACACAAAAACCAGACAAATCAAAAGGGCTGGGTGGGAATTCGCATGTGTTGGCCTCATAGCAAGCCAGTaGCAGAGTAGCTGCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: NTKTRQIKRAGWEFACVGLIASQ*QSSCTS Trigger: GCTGGTGCAGCTACTCTGCCACTGGCTTGCTATGAG...GCCAACACATGCGAATTCCCACCCAGCCCTTTTGATTTGTCTGGTTTTTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR TCA 90 bp | ACACAAAAACCAGACAAATCAAAAGGGCTGGGTGGGAATTCGCATGTGTTGGCTGTTCCTCAGCTTCACTaGCACCCGTACGTAAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TQKPDKSKGLGGNSHVLAVPQLH*HPYVRQ Trigger: CTGTCTTACGTACGGGTGTCAGTGAAGCTGAGGAAC...AGCCAACACATGCGAATTCCCACCCAGCCCTTTTGATTTGTCTGGTTTTTGTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 90 bp | CCTGCGAGCCCCAGAACTCCTCGCAGAGGCTCACGTCGTGGGGCTTaGGCTCCACATGGTAGGTGTGCACCGCGGCCGGCAGCGCCAGCA | + |
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Preference number: 5 (lower is better) Translates to: PASPRTPRRGSRRGA*APHGRCAPRPAAPA Trigger: TGCTGGCGCTGCCGGCCGCGGTGCACACCTACCATGTGGAGCTCAAGCCCCACGACGTGAGCCTCTGCGAGGAGTTCTGGGGCTCGCAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 90 bp | CTGCAGGCTCTGGAACGGCGTGACTGCTGCAGCTCGGGGAACCGTTaGAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTGGTTGGCTGG | + |
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Preference number: 5 (lower is better) Translates to: LQALERRDCCSSGNR*RQVALRGLCALVGW Trigger: CCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGCAACGGTTCCCCGAGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 90 bp | GGCGGCGACGCGCTCGGTCCCAGTCAGCTTGACTCTGGGTCACGCTaGCAGGCACCACGCGGTTCCTCAGCTTCACTGACACCCGTACGT | + |
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Preference number: 5 (lower is better) Translates to: GGDALGPSQLDSGSR*QAPRGSSASLTPVR Trigger: ACGTACGGGTGTCAGTGAAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGCGTCGCCGCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 90 bp | AGCAGACAGAAAGTGCGGCGGCGACGCGCTCGGTCCCAGTCAGCTTaGCTCTGGGTCACGCTGCCAGGCACCACGCGGTTCCTCAGCTTC | + |
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Preference number: 5 (lower is better) Translates to: SRQKVRRRRARSQSA*LWVTLPGTTRFLSF Trigger: GAAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGCGTCGCCGCCGCACTTTCTGTCTGCT 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 90 bp | CCAGCACTGCAGATAGAGCCCAGATGCCCAGCACCGCGTAGGCGCTaGGCCTCAGTGAAATGCGCCGACGTAGCGGGTGCACCAGAACCA | + |
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Preference number: 5 (lower is better) Translates to: PALQIEPRCPAPRRR*ASVKCADVAGAPEP Trigger: TGGTTCTGGTGCACCCGCTACGTCGGCGCATTTCACTGAGGCTCAGCGCCTACGCGGTGCTGGGCATCTGGGCTCTATCTGCAGTGCTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 90 bp | ACTCTGGGTCACGCTGCCAGGCACCACGCGGTTCCTCAGCTTCACTaGCACCCGTACGTAAGACAGGAGGATGGCCAGCAGGGGGAGCAA | + |
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Preference number: 5 (lower is better) Translates to: TLGHAARHHAVPQLH*HPYVRQEDGQQGEQ Trigger: TTGCTCCCCCTGCTGGCCATCCTCCTGTCTTACGTACGGGTGTCAGTGAAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 90 bp | GCCCTCCGAGGCCTCTGCGCTCTGGTTGGCTGGAGTCGAGCTAGCTaGCAACAGCCCAGAAGACAAATCGGGGTCTCCAGTGGTCTCAGT | + |
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Preference number: 5 (lower is better) Translates to: ALRGLCALVGWSRAS*QQPRRQIGVSSGLS Trigger: ACTGAGACCACTGGAGACCCCGATTTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 90 bp | CGTTGCAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTGGTTGGCTaGAGTCGAGCTAGCTGGCAACAGCCCAGAAGACAAATCGGGGTC | + |
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Preference number: 5 (lower is better) Translates to: RCRQVALRGLCALVG*SRASWQQPRRQIGV Trigger: GACCCCGATTTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGCAACG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 90 bp | CGGGGAACCGTTGCAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTaGTTGGCTGGAGTCGAGCTAGCTGGCAACAGCCCAGAAGACAAA | + |
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Preference number: 5 (lower is better) Translates to: RGTVADRLPSEASAL*LAGVELAGNSPEDK Trigger: TTTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGCAACGGTTCCCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 90 bp | AGCATCACGATCAACCCCTTCAGCTGGTGCACCAGCTGCAGGCTCTaGAACGGCGTGACTGCTGCAGCTCGGGGAACCGTTGCAGACAGG | + |
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Preference number: 5 (lower is better) Translates to: SITINPFSWCTSCRL*NGVTAAARGTVADR Trigger: CCTGTCTGCAACGGTTCCCCGAGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGATCGTGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 90 bp | AGGCGTAGGGGTCGATGGCACGCGGGTCCAGGTCTCGCAATAGGTTaGAAATGTGCAGCGGCAGCCAGCAGACCGCGAACACTACCACCA | + |
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Preference number: 5 (lower is better) Translates to: RRRGRWHAGPGLAIG*KCAAAASRPRTLPP Trigger: TGGTGGTAGTGTTCGCGGTCTGCTGGCTGCCGCTGCACATTTTCAACCTATTGCGAGACCTGGACCCGCGTGCCATCGACCCCTACGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 90 bp | ATGCTGTACAGCATCACGATCAACCCCTTCAGCTGGTGCACCAGCTaGAGGCTCTGGAACGGCGTGACTGCTGCAGCTCGGGGAACCGTT | + |
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Preference number: 5 (lower is better) Translates to: MLYSITINPFSWCTS*RLWNGVTAAARGTV Trigger: AACGGTTCCCCGAGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGATCGTGATGCTGTACAGCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 90 bp | ACGACCACCACGATGCTGTACAGCATCACGATCAACCCCTTCAGCTaGTGCACCAGCTGCAGGCTCTGGAACGGCGTGACTGCTGCAGCT | + |
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Preference number: 5 (lower is better) Translates to: TTTTMLYSITINPFS*CTSCRLWNGVTAAA Trigger: AGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGATCGTGATGCTGTACAGCATCGTGGTGGTCGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | AGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAGGAAGTTGGTCACGTaGTGCAGCCGGCGCACGCGC | + |
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Preference number: 5 (lower is better) Translates to: RGRPDKSASLSLPRLFCSRKLVT*CSRRTR Trigger: GCGCGTGCGCCGGCTGCACAACGTGACCAACTTCCT...GGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCGCCTCTGCGCTCTGGTaGGCTGGAGTCGAGCTAGCT | + |
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Preference number: 5 (lower is better) Translates to: RPDKSASLSLPRLFCSKAASALW*AGVELA Trigger: AGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGC...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | CTTTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTTCGGTCCCAGTCAGCTaGACTCTGGGTCACGCTGCC | + |
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Preference number: 5 (lower is better) Translates to: LSGVDLINLLLSLSPGSSSVPVS*TLGHAA Trigger: GGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGA...AGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | TTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTTGCCAATGAGGAAGTaGGTCACGTTGTGCAGCCGG | + |
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Preference number: 5 (lower is better) Translates to: FRGRPDKSASLSLPRLFCLPMRK*VTLCSR Trigger: CCGGCTGCACAACGTGACCAACTTCCTCATTGGCAA...GCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | CTTTCAGGGGTAGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTCAGGACAGCAGCATCTaGCGCAGCTCCTCTCGAAAG | + |
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Preference number: 5 (lower is better) Translates to: LSGVDLINLLLSLSPGSSQDSSI*RSSSRK Trigger: CTTTCGAGAGGAGCTGCGCAAGATGCTGCTGTCCTG...AGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCTACCCCTGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS-3UTR CAA 90 bp | AGACCTGATAAATCTGCTTCTCTCTCTCTCCCCAGGCTCTTCTGCTCCAAAGCCAGGTCTCGCAATAGGTaGAAAATGTGCAGCGGCAGC | + |
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Preference number: 5 (lower is better) Translates to: RPDKSASLSLPRLFCSKARSRNR*KMCSGS Trigger: GCTGCCGCTGCACATTTTCAACCTATTGCGAGACCT...GGCTTTGGAGCAGAAGAGCCTGGGGAGAGAGAGAGAAGCAGATTTATCAGGTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 72 bp | AAAGTGCGGCGGCGACGCGCTCGGTCCCAGTCAGCTTaGCTCTGGGTCACGCTGCCAGGCACCACGCGGTTC | + |
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Preference number: 6 (lower is better) Translates to: KVRRRRARSQSA*LWVTLPGTTRF Trigger: GAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGCGTCGCCGCCGCACTTT 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CAA 72 bp | GAAAGTGCGGCGGCGACGCGCTCGGTCCCAGTCAGCTaGACTCTGGGTCACGCTGCCAGGCACCACGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: ESAAATRSVPVS*TLGHAARHHAV Trigger: AACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGCGTCGCCGCCGCACTTTC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 72 bp | CCCAGAACTCCTCGCAGAGGCTCACGTCGTGGGGCTTaGGCTCCACATGGTAGGTGTGCACCGCGGCCGGCA | + |
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Preference number: 6 (lower is better) Translates to: PRTPRRGSRRGA*APHGRCAPRPA Trigger: TGCCGGCCGCGGTGCACACCTACCATGTGGAGCTCAAGCCCCACGACGTGAGCCTCTGCGAGGAGTTCTGGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | CTGGAACGGCGTGACTGCTGCAGCTCGGGGAACCGTTaGAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: LERRDCCSSGNR*RQVALRGLCAL Trigger: CAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGCAACGGTTCCCCGAGCTGCAGCAGTCACGCCGTTCCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CAA 90 bp | CAGCAGACAGAAAGTGCGGCGGCGACGCGCTCGGTCCCAGTCAGCTaGACTCTGGGTCACGCTGCCAGGCACCACGCGGTTCCTCAGCTT | + |
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Preference number: 6 (lower is better) Translates to: QQTESAAATRSVPVS*TLGHAARHHAVPQL Trigger: AAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGCGTCGCCGCCGCACTTTCTGTCTGCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | CTGGTGCACCAGCTGCAGGCTCTGGAACGGCGTGACTaGTGCAGCTCGGGGAACCGTTGCAGACAGGTTGCC | + |
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Preference number: 6 (lower is better) Translates to: LVHQLQALERRD*CSSGNRCRQVA Trigger: GGCAACCTGTCTGCAACGGTTCCCCGAGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CAA 90 bp | GAGCAAATAGGTGCCCAGAAGCAGCCCCCAGGCGTAGATCTGGCGTaGGCGCTCCTGCGAGCCCCAGAACTCCTCGCAGAGGCTCACGTC | + |
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Preference number: 6 (lower is better) Translates to: EQIGAQKQPPGVDLA*ALLRAPELLAEAHV Trigger: GACGTGAGCCTCTGCGAGGAGTTCTGGGGCTCGCAGGAGCGCCAACGCCAGATCTACGCCTGGGGGCTGCTTCTGGGCACCTATTTGCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 72 bp | CAGATAGAGCCCAGATGCCCAGCACCGCGTAGGCGCTaGGCCTCAGTGAAATGCGCCGACGTAGCGGGTGCA | + |
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Preference number: 6 (lower is better) Translates to: QIEPRCPAPRRR*ASVKCADVAGA Trigger: TGCACCCGCTACGTCGGCGCATTTCACTGAGGCTCAGCGCCTACGCGGTGCTGGGCATCTGGGCTCTATCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | GCGCTCGGTCCCAGTCAGCTTGACTCTGGGTCACGCTaGCAGGCACCACGCGGTTCCTCAGCTTCACTGACA | + |
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Preference number: 6 (lower is better) Translates to: ALGPSQLDSGSR*QAPRGSSASLT Trigger: TGTCAGTGAAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTGACCCAGAGTCAAGCTGACTGGGACCGAGCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CAA 72 bp | GCAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTGGTaGGCTGGAGTCGAGCTAGCTGGCAACAGCCCAGAA | + |
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Preference number: 6 (lower is better) Translates to: ADRLPSEASALW*AGVELAGNSPE Trigger: TTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 72 bp | CACGCTGCCAGGCACCACGCGGTTCCTCAGCTTCACTaGCACCCGTACGTAAGACAGGAGGATGGCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: HAARHHAVPQLH*HPYVRQEDGQQ Trigger: CTGCTGGCCATCCTCCTGTCTTACGTACGGGTGTCAGTGAAGCTGAGGAACCGCGTGGTGCCTGGCAGCGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | AGCATCACGATCAACCCCTTCAGCTGGTGCACCAGCTaGAGGCTCTGGAACGGCGTGACTGCTGCAGCTCGG | + |
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Preference number: 6 (lower is better) Translates to: SITINPFSWCTS*RLWNGVTAAAR Trigger: CCGAGCTGCAGCAGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGATCGTGATGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 72 bp | CAGGTTGCCCTCCGAGGCCTCTGCGCTCTGGTTGGCTaGAGTCGAGCTAGCTGGCAACAGCCCAGAAGACAA | + |
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Preference number: 6 (lower is better) Translates to: QVALRGLCALVG*SRASWQQPRRQ Trigger: TTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CAA 90 bp | GGAACCGTTGCAGACAGGTTGCCCTCCGAGGCCTCTGCGCTCTGGTaGGCTGGAGTCGAGCTAGCTGGCAACAGCCCAGAAGACAAATCG | + |
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Preference number: 6 (lower is better) Translates to: GTVADRLPSEASALW*AGVELAGNSPEDKS Trigger: CGATTTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCCTCGGAGGGCAACCTGTCTGCAACGGTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS TCA 72 bp | GGTCGATGGCACGCGGGTCCAGGTCTCGCAATAGGTTaGAAATGTGCAGCGGCAGCCAGCAGACCGCGAACA | + |
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Preference number: 6 (lower is better) Translates to: GRWHAGPGLAIG*KCAAAASRPRT Trigger: TGTTCGCGGTCTGCTGGCTGCCGCTGCACATTTTCAACCTATTGCGAGACCTGGACCCGCGTGCCATCGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | GCACGCGGGTCCAGGTCTCGCAATAGGTTGAAAATGTaGAGCGGCAGCCAGCAGACCGCGAACACTACCACC | + |
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Preference number: 6 (lower is better) Translates to: ARGSRSRNRLKM*SGSQQTANTTT Trigger: GGTGGTAGTGTTCGCGGTCTGCTGGCTGCCGCTGCACATTTTCAACCTATTGCGAGACCTGGACCCGCGTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 72 bp | GGCCTCTGCGCTCTGGTTGGCTGGAGTCGAGCTAGCTaGCAACAGCCCAGAAGACAAATCGGGGTCTCCAGT | + |
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Preference number: 6 (lower is better) Translates to: GLCALVGWSRAS*QQPRRQIGVSS Trigger: ACTGGAGACCCCGATTTGTCTTCTGGGCTGTTGCCAGCTAGCTCGACTCCAGCCAACCAGAGCGCAGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS GCA 72 bp | GCAGGCAGTTGCCCACCAGACCCACGACCACCACGATaGTGTACAGCATCACGATCAACCCCTTCAGCTGGT | + |
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Preference number: 6 (lower is better) Translates to: AGSCPPDPRPPR*CTASRSTPSAG Trigger: ACCAGCTGAAGGGGTTGATCGTGATGCTGTACAGCATCGTGGTGGTCGTGGGTCTGGTGGGCAACTGCCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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| CDS CCA 72 bp | ACGATGCTGTACAGCATCACGATCAACCCCTTCAGCTaGTGCACCAGCTGCAGGCTCTGGAACGGCGTGACT | + |
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Preference number: 6 (lower is better) Translates to: TMLYSITINPFS*CTSCRLWNGVT Trigger: AGTCACGCCGTTCCAGAGCCTGCAGCTGGTGCACCAGCTGAAGGGGTTGATCGTGATGCTGTACAGCATCGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000051277.4 |
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