Pregenerated sensors for PRL8A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000019756Ensembl transcript IDs: ENSMUST00000006664.8, ENSMUST00000095926.2
Found 53 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CATCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAACTAGGGTaGGGATCTTATACCCACACCCACAGTGACACACCCATTCCAACC | + |
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Preference number: 1 (lower is better) Translates to: HPKAASGRLTSRQLG*GSYTHTHSDTPIPT Trigger: GGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTATAAGATCCTCACCCTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR GCA 90 bp | CCAACCAGGTCACACCTATTCCAACAAGGCCACACCTTCAGATGGTaGCACTCCCTGGTCCAAGGATATACAAACCATCACACCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: PTRSHLFQQGHTFRW*HSLVQGYTNHHTHA Trigger: AGCATGGGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGTGGAGGAACTCATGTCACTTTCTCACTCATTAAAATCTTATGTATCCTTAATGGCTGCAGTCAAATaGCTGAGCTCTTTCACTCCA | + |
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Preference number: 2 (lower is better) Translates to: TVEELMSLSHSLKSYVSLMAAVK*LSSFTP Trigger: TGGAGTGAAAGAGCTCAGCCATTTGACTGCAGCCAT...TAAGGATACATAAGATTTTAATGAGTGAGAAAGTGACATGAGTTCCTCCACTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR-3UTR TCA 90 bp | AGTTGTTCTCTAAATGTCCATGAAGAACAGTTGTGTTTCATTCTGATTCCCAGAGATATGCAGGATATGTaGCCCCTGTATAAAAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: SCSLNVHEEQLCFILIPRDMQDM*PLYKSH Trigger: ATGGCTTTTATACAGGGGTCACATATCCTGCATATC...TCTGGGAATCAGAATGAAACACAACTGTTCTTCATGGACATTTAGAGAACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGAGGAACTCATGTCACTTTCTCACTCATTAAAATCTTATGTATCCTTATGTATAAAAGCCATTTaGTACCCAAAAGATCGACCC | + |
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Preference number: 2 (lower is better) Translates to: TVEELMSLSHSLKSYVSLCIKAI*YPKDRP Trigger: GGGTCGATCTTTTGGGTATCAAATGGCTTTTATACA...TAAGGATACATAAGATTTTAATGAGTGAGAAAGTGACATGAGTTCCTCCACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR CCA 72 bp | TCAGAGGTTCAGTCCATTATCATCAAGGTGGGAGCATaGCAGTATCCAGGTAGGAATGGTGCAGGAGGAGCT | + |
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Preference number: 3 (lower is better) Translates to: SEVQSIIIKVGA*QYPGRNGAGGA Trigger: AGCTCCTCCTGCACCATTCCTACCTGGATACTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR GCA 72 bp | TCACACCTATTCCAACAAGGCCACACCTTCAGATGGTaGCACTCCCTGGTCCAAGGATATACAAACCATCAC | + |
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Preference number: 3 (lower is better) Translates to: SHLFQQGHTFRW*HSLVQGYTNHH Trigger: GTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR CCA 72 bp | AGGTCACACCTATTCCAACAAGGCCACACCTTCAGATaGTGCCACTCCCTGGTCCAAGGATATACAAACCAT | + |
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Preference number: 3 (lower is better) Translates to: RSHLFQQGHTFR*CHSLVQGYTNH Trigger: ATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR CCA 72 bp | TTACGCATTCAGAGGTTCAGTCCATTATCATCAAGGTaGGAGCATGGCAGTATCCAGGTAGGAATGGTGCAG | + |
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Preference number: 3 (lower is better) Translates to: LRIQRFSPLSSR*EHGSIQVGMVQ Trigger: CTGCACCATTCCTACCTGGATACTGCCATGCTCCCACCTTGATGATAATGGACTGAACCTCTGAATGCGTAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR CCA 72 bp | TTTAATATGAAGAGCCACACAATGGCTGCAGTCAAATaGCTGAGCTCTTTCACTCCACCCAGGAAAGTTGTT | + |
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Preference number: 3 (lower is better) Translates to: FNMKSHTMAAVK*LSSFTPPRKVV Trigger: AACAACTTTCCTGGGTGGAGTGAAAGAGCTCAGCCATTTGACTGCAGCCATTGTGTGGCTCTTCATATTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| 3UTR CCA 72 bp | ACACAATTTATGAAATTTCCAAACAATCAACTGCCATaGACAACCTCCAAATCACACAGGGTAGGTGTTCCC | + |
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Preference number: 3 (lower is better) Translates to: TQFMKFPNNQLP*TTSKSHRVGVP Trigger: GGGAACACCTACCCTGTGTGATTTGGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR TCA 90 bp | CTTATACCCACACCCACAGTGACACACCCATTCCAACCAGGTCACACCTATTCCGTGACATGCAGAAATTaGTGCAGTTTTCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: LIPTPTVTHPFQPGHTYSVTCRN*CSFLPQ Trigger: CTGTGGGAGAAAACTGCATCAATTTCTGCATGTCAC...GGAATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTATAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR GCA 90 bp | GGCCACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACCCAACAGTAGGAATGTaGAGAAGTGGGGTTGAATTA | + |
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Preference number: 4 (lower is better) Translates to: GHTFRWCHSLVQGYTNHHPTVGM*RSGVEL Trigger: TAATTCAACCCCACTTCTGCACATTCCTACTGTTGG...GTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTGGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR GCA 90 bp | TTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACACCCATGCTCTACAAGGGGTTTCATaGAGCCTTCCTCATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: FRWCHSLVQGYTNHHTHALQGVS*SLPHLC Trigger: ACACAGATGAGGAAGGCTGCATGAAACCCCTTGTAG...AGCATGGGTGTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR TCA 90 bp | GATCTTATACCCACACCCACAGTGACACACCCATTCCAACCAGGTCACACCTATCCTTCCTCATCTGTGTaGCATGCAGAAATTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: DLIPTPTVTHPFQPGHTYPSSSV*HAEIDA Trigger: TGCATCAATTTCTGCATGTCACACAGATGAGGAAGG...ATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTATAAGATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR TCA 90 bp | ATACCCACACCCACAGTGACACACCCATTCCAACCAGGTCACACCTATTCCAACCTGCCTAATCAGTTGTaGGTTAAAGTGTGTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: IPTPTVTHPFQPGHTYSNLPNQL*VKVCEV Trigger: CACTTCACACACTTTAACTCACAACTGATTAGGCAG...GTTGGAATAGGTGTGACCTGGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR CCA 90 bp | TTCCAACCAGGTCACACCTATTCCAACAAGGCCACACCTTCAGATGGTGCCACTAGCTCACCTCTTTTATaGATGGGAATAACTACTGAG | + |
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Preference number: 4 (lower is better) Translates to: FQPGHTYSNKATPSDGATSSPLL*MGITTE Trigger: CTCAGTAGTTATTCCCATCCATAAAAGAGGTGAGCT...AGTGGCACCATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR CCA 90 bp | GGCCACACCTTCAGATGGTGCCACTCCCTGGTCCAAGGATATACAAACCATCACATGATTTCAGCTCTCTaGATGGCATTGTTAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: GHTFRWCHSLVQGYTNHHMISAL*MALLNV Trigger: AACATTTAACAATGCCATCCAGAGAGCTGAAATCAT...GTGATGGTTTGTATATCCTTGGACCAGGGAGTGGCACCATCTGAAGGTGTGGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR CCA 90 bp | CTGAGAGTTCTATGTCTTCATCCAAAGGCTGCTAGTGGAAGACTGACTTCCAGGTCTCTTCAATCTCATTaGCTTTTGAGAGGATACTTT | + |
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Preference number: 4 (lower is better) Translates to: LRVLCLHPKAASGRLTSRSLQSH*LLRGYF Trigger: AAAGTATCCTCTCAAAAGCCAATGAGATTGAAGAGA...CCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATGAAGACATAGAACTCTCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR GCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCCTACAAGGGGTTTCATaGAGCCTTCCTCATCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSLQGVS*SLPHLC Trigger: ACACAGATGAGGAAGGCTGCATGAAACCCCTTGTAG...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR TCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCGTGACATGCAGAAATTaGTGCAGTTTTCTCCCACAG | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSVTCRN*CSFLPQ Trigger: CTGTGGGAGAAAACTGCATCAATTTCTGCATGTCAC...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR TCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCCCTTCCTCATCTGTGTaGCATGCAGAAATTGATGCA | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSPSSSV*HAEIDA Trigger: TGCATCAATTTCTGCATGTCACACAGATGAGGAAGG...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| 3UTR CAA 72 bp | CAGGAAAGTTGTTCTCTAAATGTCCATGAAGAACAGTaGTGTTTCATTCTGATTCCCAGAGTGAGAGGAAAT | + |
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Preference number: 4 (lower is better) Translates to: QESCSLNVHEEQ*CFILIPRVRGN Trigger: ATTTCCTCTCACTCTGGGAATCAGAATGAAACACAACTGTTCTTCATGGACATTTAGAGAACAACTTTCCTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR TCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCCTGCCTAATCAGTTGTaGGTTAAAGTGTGTGAAGTG | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSLPNQL*VKVCEV Trigger: CACTTCACACACTTTAACTCACAACTGATTAGGCAG...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR GCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCCCAACAGTAGGAATGTaGAGAAGTGGGGTTGAATTA | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSPTVGM*RSGVEL Trigger: TAATTCAACCCCACTTCTGCACATTCCTACTGTTGG...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTCCACACGAAGGCAATaGGAAAGGTTAAATATTGCC | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSSTRRQ*ERLNIA Trigger: GGCAATATTTAACCTTTCCCATTGCCTTCGTGTGGA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR TCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTTGTGGAGAAACTCTTaGTGCATTTGCTCAGAAACA | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSLWRNS*CICSET Trigger: TGTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTGTCAGTTGATTTTATaGATGGAAGATGTTCCCAGG | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSCQLIL*MEDVPR Trigger: CCTGGGAACATCTTCCATCCATAAAATCAACTGACA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCATGATTTCAGCTCTCTaGATGGCATTGTTAAATGTT | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSMISAL*MALLNV Trigger: AACATTTAACAATGCCATCCAGAGAGCTGAAATCAT...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CCA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTCTCTTCAATCTCATTaGCTTTTGAGAGGATACTTT | + |
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Preference number: 4 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSSLQSH*LLRGYF Trigger: AAAGTATCCTCTCAAAAGCCAATGAGATTGAAGAGA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CAA 90 bp | ACACACCCATTCCAACCAGGTCACACCTATTCCAACAAGGCCACACCTTCAGATCCCACAGGAGCAGGTTaGAAACCACCAACAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: THPFQPGHTYSNKATPSDPTGAG*KPPTVG Trigger: TCCTACTGTTGGTGGTTTCAAACCTGCTCCTGTGGG...ATCTGAAGGTGTGGCCTTGTTGGAATAGGTGTGACCTGGTTGGAATGGGTGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS TCA 90 bp | GTAAGTTCTGGCTCTGAGAACAAGCTGATCCTGCCTAATCAGTTGTaGGTTAAAGTGTGTGAAGTGTCTGGAAGAGAACTCATTGTGGAG | + |
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Preference number: 5 (lower is better) Translates to: VSSGSENKLILPNQL*VKVCEVSGRELIVE Trigger: CTCCACAATGAGTTCTCTTCCAGACACTTCACACACTTTAACTCACAACTGATTAGGCAGGATCAGCTTGTTCTCAGAGCCAGAACTTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS TCA 90 bp | TTAAATGTTTCTACAAGGGGTTTCATGCAGCCTTCCTCATCTGTGTaGCATGCAGAAATTGATGCAGTTTTCTCCCACAGGAGCAGGTTT | + |
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Preference number: 5 (lower is better) Translates to: LNVSTRGFMQPSSSV*HAEIDAVFSHRSRF Trigger: AAACCTGCTCCTGTGGGAGAAAACTGCATCAATTTCTGCATGTCACACAGATGAGGAAGGCTGCATGAAACCCCTTGTAGAAACATTTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS-3UTR CAA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCCCCACAGGAGCAGGTTaGAAACCACCAACAGTAGGA | + |
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Preference number: 5 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSPTGAG*KPPTVG Trigger: TCCTACTGTTGGTGGTTTCAAACCTGCTCCTGTGGG...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS TCA 90 bp | AAGTGTGTGAAGTGTCTGGAAGAGAACTCATTGTGGAGAAACTCTTaGTGCATTTGCTCAGAAACATTAAGGATGATTTCAGCTCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: KCVKCLEENSLWRNS*CICSETLRMISALW Trigger: CCAGAGAGCTGAAATCATCCTTAATGTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAATGAGTTCTCTTCCAGACACTTCACACACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS-3UTR CAA 90 bp | AGTTGTTCTCTAAATGTCCATGAAGAACAGTTGTGTTTCATTCTGATTCCCAGATTCAGGAGCTCCCTGTaGTTCTCTTCAATCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: SCSLNVHEEQLCFILIPRFRSSL*FSSISL Trigger: CAATGAGATTGAAGAGAACAACAGGGAGCTCCTGAA...TCTGGGAATCAGAATGAAACACAACTGTTCTTCATGGACATTTAGAGAACAACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR CAA 90 bp | AGTTGTTCTCTAAATGTCCATGAAGAACAGTTGTGTTTCATTCTGATTCCCAGATGTGACATGCAGAAATaGATGCAGTTTTCTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: SCSLNVHEEQLCFILIPRCDMQK*MQFSPT Trigger: TGTGGGAGAAAACTGCATCAATTTCTGCATGTCACA...TCTGGGAATCAGAATGAAACACAACTGTTCTTCATGGACATTTAGAGAACAACT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS-3UTR CAA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTTCAGGAGCTCCCTGTaGTTCTCTTCAATCTCATTG | + |
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Preference number: 5 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSFRSSL*FSSISL Trigger: CAATGAGATTGAAGAGAACAACAGGGAGCTCCTGAA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CAA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCTGTGACATGCAGAAATaGATGCAGTTTTCTCCCACA | + |
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Preference number: 5 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSCDMQK*MQFSPT Trigger: TGTGGGAGAAAACTGCATCAATTTCTGCATGTCACA...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CAA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCGCTCTCTGGATGGCATaGTTAAATGTTTCTACAAGG | + |
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Preference number: 5 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSALWMA*LNVSTR Trigger: CCTTGTAGAAACATTTAACAATGCCATCCAGAGAGC...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CAA 90 bp | AAATGTACACAATTTATGAAATTTCCAAACAATCAACTGCCATGGACAACCTCCATTGTGGAGAAACTCTaGATGCATTTGCTCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: KCTQFMKFPNNQLPWTTSIVEKL*MHLLRN Trigger: GTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAAT...GGAGGTTGTCCATGGCAGTTGATTGTTTGGAAATTTCATAAATTGTGTACATTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000006664.8 |
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| CDS-3UTR CAA 90 bp | ACAGTGGAGGAACTCATGTCACTTTCTCACTCATTAAAATCTTATGTATCCTTAATTGTGGAGAAACTCTaGATGCATTTGCTCAGAAAC | + |
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Preference number: 5 (lower is better) Translates to: TVEELMSLSHSLKSYVSLIVEKL*MHLLRN Trigger: GTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAAT...TAAGGATACATAAGATTTTAATGAGTGAGAAAGTGACATGAGTTCCTCCACTGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS CCA 72 bp | GGGACATCATTCATGGCACTCAGTTCAATCACTAGATaGTACAGTGGGCTGATCCAAGCACCCACAAAATTG | + |
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Preference number: 6 (lower is better) Translates to: GTSFMALSSITR*YSGLIQAPTKL Trigger: CAATTTTGTGGGTGCTTGGATCAGCCCACTGTACCATCTAGTGATTGAACTGAGTGCCATGAATGATGTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 72 bp | CAGAAATTGATGCAGTTTTCTCCCACAGGAGCAGGTTaGAAACCACCAACAGTAGGAATGTGCAGAAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: QKLMQFSPTGAG*KPPTVGMCRSG Trigger: CCCACTTCTGCACATTCCTACTGTTGGTGGTTTCAAACCTGCTCCTGTGGGAGAAAACTGCATCAATTTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS TCA 72 bp | GGCTCTGAGAACAAGCTGATCCTGCCTAATCAGTTGTaGGTTAAAGTGTGTGAAGTGTCTGGAAGAGAACTC | + |
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Preference number: 6 (lower is better) Translates to: GSENKLILPNQL*VKVCEVSGREL Trigger: GAGTTCTCTTCCAGACACTTCACACACTTTAACTCACAACTGATTAGGCAGGATCAGCTTGTTCTCAGAGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 90 bp | TGTGACATGCAGAAATTGATGCAGTTTTCTCCCACAGGAGCAGGTTaGAAACCACCAACAGTAGGAATGTGCAGAAGTGGGGTTGAATTA | + |
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Preference number: 6 (lower is better) Translates to: CDMQKLMQFSPTGAG*KPPTVGMCRSGVEL Trigger: TAATTCAACCCCACTTCTGCACATTCCTACTGTTGGTGGTTTCAAACCTGCTCCTGTGGGAGAAAACTGCATCAATTTCTGCATGTCACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CCA 72 bp | CATTCAGGAGCTCCCTGTTGTTCTCTTCAATCTCATTaGCTTTTGAGAGGATACTTTCAGGGACATCATTCA | + |
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Preference number: 6 (lower is better) Translates to: HSGAPCCSLQSH*LLRGYFQGHHS Trigger: TGAATGATGTCCCTGAAAGTATCCTCTCAAAAGCCAATGAGATTGAAGAGAACAACAGGGAGCTCCTGAATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 72 bp | TCATTCAGGAGCTCCCTGTTGTTCTCTTCAATCTCATaGGCTTTTGAGAGGATACTTTCAGGGACATCATTC | + |
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Preference number: 6 (lower is better) Translates to: SFRSSLLFSSIS*AFERILSGTSF Trigger: GAATGATGTCCCTGAAAGTATCCTCTCAAAAGCCAATGAGATTGAAGAGAACAACAGGGAGCTCCTGAATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 90 bp | TCACCTCTTTTATGGATGGGAATAACTACTGAGAAATTTCTTACCTaGGTGAGTATCCACCTAAGGTCATTCAGGAGCTCCCTGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: SPLLWMGITTEKFLT*VSIHLRSFRSSLLF Trigger: GAACAACAGGGAGCTCCTGAATGACCTTAGGTGGATACTCACCAAGGTAAGAAATTTCTCAGTAGTTATTCCCATCCATAAAAGAGGTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000095926.2 |
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| CDS CAA 90 bp | AAAGTGTGTGAAGTGTCTGGAAGAGAACTCATTGTGGAGAAACTCTaGATGCATTTGCTCAGAAACATTAAGGATGATTTCAGCTCTCTG | + |
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Preference number: 6 (lower is better) Translates to: KVCEVSGRELIVEKL*MHLLRNIKDDFSSL Trigger: CAGAGAGCTGAAATCATCCTTAATGTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAATGAGTTCTCTTCCAGACACTTCACACACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 72 bp | GAAACATTAAGGATGATTTCAGCTCTCTGGATGGCATaGTTAAATGTTTCTACAAGGGGTTTCATGCAGCCT | + |
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Preference number: 6 (lower is better) Translates to: ETLRMISALWMA*LNVSTRGFMQP Trigger: AGGCTGCATGAAACCCCTTGTAGAAACATTTAACAATGCCATCCAGAGAGCTGAAATCATCCTTAATGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS CAA 72 bp | GAAGTGTCTGGAAGAGAACTCATTGTGGAGAAACTCTaGATGCATTTGCTCAGAAACATTAAGGATGATTTC | + |
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Preference number: 6 (lower is better) Translates to: EVSGRELIVEKL*MHLLRNIKDDF Trigger: GAAATCATCCTTAATGTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAATGAGTTCTCTTCCAGACACTTC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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| CDS TCA 72 bp | AAGTGTCTGGAAGAGAACTCATTGTGGAGAAACTCTTaGTGCATTTGCTCAGAAACATTAAGGATGATTTCA | + |
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Preference number: 6 (lower is better) Translates to: KCLEENSLWRNS*CICSETLRMIS Trigger: TGAAATCATCCTTAATGTTTCTGAGCAAATGCATCAAGAGTTTCTCCACAATGAGTTCTCTTCCAGACACTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000006664.8 ENSMUST00000095926.2 |
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