Pregenerated sensors for PRL7D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021348Ensembl transcript IDs: ENSMUST00000021776.4, ENSMUST00000224026.2
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CAGAGAATCTTCCTCCTGCCTCCTGCCACAGATGGGAGCAAATGTTaGAACCTACACTCAAACATTAAGCAGAATGTGAAACCCTGGGAC | + |
|
Preference number: 1 (lower is better) Translates to: QRIFLLPPATDGSKC*NLHSNIKQNVKPWD Trigger: GTCCCAGGGTTTCACATTCTGCTTAATGTTTGAGTGTAGGTTTCAACATTTGCTCCCATCTGTGGCAGGAGGCAGGAGGAAGATTCTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 90 bp | ATGGGAGCAAATGTTGAAACCTACACTCAAACATTAAGCAGAATGTaGAACCCTGGGACACAGAGCCATAAACAGGATGTTTCCATCATA | + |
|
Preference number: 1 (lower is better) Translates to: MGANVETYTQTLSRM*NPGTQSHKQDVSII Trigger: TATGATGGAAACATCCTGTTTATGGCTCTGTGTCCCAGGGTTTCACATTCTGCTTAATGTTTGAGTGTAGGTTTCAACATTTGCTCCCAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 90 bp | ATATCATGGCAATCTACTTTTATTTACAGAGGGGTGACAGTGAGGTaGGCCAGTATTCTTGTTTGCTTAAAGGCAACTGGCAAGATGAAC | + |
|
Preference number: 1 (lower is better) Translates to: ISWQSTFIYRGVTVR*ASILVCLKATGKMN Trigger: GTTCATCTTGCCAGTTGCCTTTAAGCAAACAAGAATACTGGCTCACCTCACTGTCACCCCTCTGTAAATAAAAGTAGATTGCCATGATAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 90 bp | ATGAAGAGAATAACATTTGTAGGAACTCCAGCAAGAGGTCAACAGTaGCCTTATGCTATTTCCCCTTCTATTGTTCACAGAACCCTGATT | + |
|
Preference number: 1 (lower is better) Translates to: MKRITFVGTPARGQQ*PYAISPSIVHRTLI Trigger: AATCAGGGTTCTGTGAACAATAGAAGGGGAAATAGCATAAGGTCACTGTTGACCTCTTGCTGGAGTTCCTACAAATGTTATTCTCTTCAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR GCA 90 bp | AATAACATTTGTAGGAACTCCAGCAAGAGGTCAACAGTGACCTTATaGTATTTCCCCTTCTATTGTTCACAGAACCCTGATTTTGAGATT | + |
|
Preference number: 1 (lower is better) Translates to: NNICRNSSKRSTVTL*YFPFYCSQNPDFEI Trigger: AATCTCAAAATCAGGGTTCTGTGAACAATAGAAGGGGAAATAGCATAAGGTCACTGTTGACCTCTTGCTGGAGTTCCTACAAATGTTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CCA 90 bp | CTATCTCTCTTGGCCTATACATATCTGCATATCCCTGACACTTGTTaGAAATATATCATGGCAATCTACTTTTATTTACAGAGGGGTGAC | + |
|
Preference number: 1 (lower is better) Translates to: LSLLAYTYLHIPDTC*KYIMAIYFYLQRGD Trigger: GTCACCCCTCTGTAAATAAAAGTAGATTGCCATGATATATTTCCAACAAGTGTCAGGGATATGCAGATATGTATAGGCCAAGAGAGATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 90 bp | AATCTCTCTGCAGTCTTTGACTTCATCACACAAGTTGGCAATGAATaGAATTCTCCCTTTCCTTACTTCTTTATTCCATCTTGGAATAAA | + |
|
Preference number: 1 (lower is better) Translates to: NLSAVFDFITQVGNE*NSPFPYFFIPSWNK Trigger: TTTATTCCAAGATGGAATAAAGAAGTAAGGAAAGGGAGAATTTCATTCATTGCCAACTTGTGTGATGAAGTCAAAGACTGCAGAGAGATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR GCA 90 bp | ACAAGGCCTTCATGGATCTGTATTAAGTCCTTTGTGTGTATATTATaGCTTGTAGTTTATGCTGTTTATGGGATTCTACATGTGAAAACA | + |
|
Preference number: 1 (lower is better) Translates to: TRPSWICIKSFVCIL*LVVYAVYGILHVKT Trigger: TGTTTTCACATGTAGAATCCCATAAACAGCATAAACTACAAGGCATAATATACACACAAAGGACTTAATACAGATCCATGAAGGCCTTGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTCAGCTAAGGACAGGGGCCAGGAGAGGATTTCACACCCTAGTCACAGTTATGCCTTGCCTGGAATGTaGCTTAAGCCACAGAAGAAT | + |
|
Preference number: 2 (lower is better) Translates to: ESAKDRGQERISHPSHSYALPGM*LKPQKN Trigger: ATTCTTCTGTGGCTTAAGTCACATTCCAGGCAAGGC...ATAACTGTGACTAGGGTGTGAAATCCTCTCCTGGCCCCTGTCCTTAGCTGACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR GCA 90 bp | GCTATTCCTCTGAGCCTTGTGAAAGCTTGTATCAGAGGGTTCTGCTCTAGCAGAAGAGAATCTTCCTCCTaGCTCCTGCCACAGATGGGA | + |
|
Preference number: 2 (lower is better) Translates to: AIPLSLVKACIRGFCSSRRESSS*LLPQMG Trigger: TCCCATCTGTGGCAGGAGGCAGGAGGAAGATTCTCT...TCTGCTAGAGCAGAACCCTCTGATACAAGCTTTCACAAGGCTCAGAGGAATAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTCCTCTGAGCCTTGTGAAAGCTTGTATCAGAGGGTTCTGCTCTAGCAGAACATTAAGCAGAATGTaGAACCCTGGGACACAGAGC | + |
|
Preference number: 2 (lower is better) Translates to: AIPLSLVKACIRGFCSSRTLSRM*NPGTQS Trigger: GCTCTGTGTCCCAGGGTTTCACATTCTGCTTAATGT...TCTGCTAGAGCAGAACCCTCTGATACAAGCTTTCACAAGGCTCAGAGGAATAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | GCTATTCCTCTGAGCCTTGTGAAAGCTTGTATCAGAGGGTTCTGCTCTAGCAGAGCAAGAGGTCAACAGTaGCCTTATGCTATTTCCCCT | + |
|
Preference number: 2 (lower is better) Translates to: AIPLSLVKACIRGFCSSRARGQQ*PYAISP Trigger: AGGGGAAATAGCATAAGGTCACTGTTGACCTCTTGC...TCTGCTAGAGCAGAACCCTCTGATACAAGCTTTCACAAGGCTCAGAGGAATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | GACACAAAACAGAGGAATACCTTCAAAGGACTGGCAGGAACCAGGCAATGTTTACTTTGCAGGAATGGATaGACACAGCCTTGCCTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: DTKQRNTFKGLAGTRQCLLCRNG*TQPCLE Trigger: TTCCAGGCAAGGCTGTGTTCATCCATTCCTGCAAAG...TAAACATTGCCTGGTTCCTGCCAGTCCTTTGAAGGTATTCCTCTGTTTTGTGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTCAGCTAAGGACAGGGGCCAGGAGAGGATTTCACACCCTAGTCACAGTTATCACATGAGTCACTACTaGAGTGGATATAGCACTTTT | + |
|
Preference number: 2 (lower is better) Translates to: ESAKDRGQERISHPSHSYHMSHY*SGYSTF Trigger: AAAAGTGCTATATCCACTCCAGTAGTGACTCATGTG...ATAACTGTGACTAGGGTGTGAAATCCTCTCCTGGCCCCTGTCCTTAGCTGACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTTTTCCCTCTCTCTGCAGTCTTTaGCTTCATCACACAAGTTGG | + |
|
Preference number: 2 (lower is better) Translates to: HVKTSRPLLFVTAVRLFPSLCSL*LHHTSW Trigger: CCAACTTGTGTGATGAAGTCAAAGACTGCAGAGAGA...GGGAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | CACATGAGTCACTACTGGAGTGGATATAGCACTTTTCCTTTTATGTTCATCAAGGACCTCTCCTCTTTGTaGCTGCTGTTAGGCTTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: HMSHYWSGYSTFPFMFIKDLSSL*LLLGFF Trigger: GAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTC...CTTGATGAACATAAAAGGAAAAGTGCTATATCCACTCCAGTAGTGACTCATGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTACATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTCAAACTTTGCAGGAATaGATGAACACAGCCTTGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ILHVKTSRPLLFVTAVRLQTLQE*MNTALP Trigger: AGGCAAGGCTGTGTTCATCCATTCCTGCAAAGTTTG...AAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATGTAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR TCA 90 bp | ATTCTACATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTCACACAAGTTGGCAATaGATGAAATTCTCCCTTTCC | + |
|
Preference number: 2 (lower is better) Translates to: ILHVKTSRPLLFVTAVRLHTSWQ*MKFSLS Trigger: GGAAAGGGAGAATTTCATTCATTGCCAACTTGTGTG...AAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATGTAGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR GCA 90 bp | CACATGAGTCACTACTGGAGTGGATATAGCACTTTTCCTTTTATGTTCATCAAGGCCAGTATTCTTGTTTaGTTAAAGGCAACTGGCAAG | + |
|
Preference number: 2 (lower is better) Translates to: HMSHYWSGYSTFPFMFIKASILV*LKATGK Trigger: CTTGCCAGTTGCCTTTAAGCAAACAAGAATACTGGC...CTTGATGAACATAAAAGGAAAAGTGCTATATCCACTCCAGTAGTGACTCATGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CCA 90 bp | ATTCTACATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTGAAATAGAAAGAGAATaGATCCAGAACAGAGGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: ILHVKTSRPLLFVTAVRLEIERE*IQNRGK Trigger: CTTCCCTCTGTTCTGGATCCATTCTCTTTCTATTTC...AAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATGTAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CCA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGATCCCTGACACTTGTTaGAAATATATCATGGCAATC | + |
|
Preference number: 2 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRIPDTC*KYIMAI Trigger: GATTGCCATGATATATTTCCAACAAGTGTCAGGGAT...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTGTTTGCTTAAAGGCAACTGGCAAGATGAACTCCCCTTAAACAATCACAATATAGAACAAAGCTTATaGGAGCAACCAACCAATATC | + |
|
Preference number: 2 (lower is better) Translates to: SCLLKGNWQDELPLNNHNIEQSL*EQPTNI Trigger: GATATTGGTTGGTTGCTCCCATAAGCTTTGTTCTAT...ATTGTGATTGTTTAAGGGGAGTTCATCTTGCCAGTTGCCTTTAAGCAAACAAGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTTTTCCCGGAATGGGACAAACTTaGCAGGAATGGATGAACACA | + |
|
Preference number: 3 (lower is better) Translates to: HVKTSRPLLFVTAVRLFPGMGQT*QEWMNT Trigger: TGTGTTCATCCATTCCTGCAAAGTTTGTCCCATTCC...GGGAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 72 bp | TTCCTCCTGCCTCCTGCCACAGATGGGAGCAAATGTTaGAACCTACACTCAAACATTAAGCAGAATGTGAAA | + |
|
Preference number: 3 (lower is better) Translates to: FLLPPATDGSKC*NLHSNIKQNVK Trigger: TTTCACATTCTGCTTAATGTTTGAGTGTAGGTTTCAACATTTGCTCCCATCTGTGGCAGGAGGCAGGAGGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 72 bp | CAATCTACTTTTATTTACAGAGGGGTGACAGTGAGGTaGGCCAGTATTCTTGTTTGCTTAAAGGCAACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QSTFIYRGVTVR*ASILVCLKATG Trigger: GCCAGTTGCCTTTAAGCAAACAAGAATACTGGCTCACCTCACTGTCACCCCTCTGTAAATAAAAGTAGATTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 72 bp | AGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTaGCACAAAACAGAGGAATACCTTCAAAGGACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: RVLQKARYIEVI*HKTEEYLQRTG Trigger: GCCAGTCCTTTGAAGGTATTCCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CCA 72 bp | GGAAGAGAGGGTAGAACGGGGAAGAGCAGAGAGAGGTaGATAATATGTAATCAGGATACAATATATGAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GREGRTGKSRER*IICNQDTIYEE Trigger: TTCCTCATATATTGTATCCTGATTACATATTATCCACCTCTCTCTGCTCTTCCCCGTTCTACCCTCTCTTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTACTTTTATTTACAGAGGGGTGACAGTGAGGTGAGCCAGTATTCTTGTTTGAGCTTAGAGAATTCCTaGGAAGAGAAGGCAGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: IYFYLQRGDSEVSQYSCLSLENS*EEKADR Trigger: TCTGTCTGCCTTCTCTTCCAAGGAATTCTCTAAGCT...CAAACAAGAATACTGGCTCACCTCACTGTCACCCCTCTGTAAATAAAAGTAGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGAGCCAGTATTCTTGTTaGCTTAAAGGCAACTGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRSQYSC*LKGNWQ Trigger: TTGCCAGTTGCCTTTAAGCAAACAAGAATACTGGCT...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGTTCCCTACCATGTGCTaGTTTCACTCAATTATGATG | + |
|
Preference number: 3 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRFPTMC*FHSIMM Trigger: CATCATAATTGAGTGAAACAAGCACATGGTAGGGAA...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCTACTTTTATTTACAGAGGGGTGACAGTGAGGTGAGCCAGTATTCTTGTTTGCATGAAGGAGTTGAGTaGGTGCATATAAAGACACTT | + |
|
Preference number: 3 (lower is better) Translates to: IYFYLQRGDSEVSQYSCLHEGVE*VHIKTL Trigger: AAGTGTCTTTATATGCACCAACTCAACTCCTTCATG...CAAACAAGAATACTGGCTCACCTCACTGTCACCCCTCTGTAAATAAAAGTAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 72 bp | ATAACATTTGTAGGAACTCCAGCAAGAGGTCAACAGTaGCCTTATGCTATTTCCCCTTCTATTGTTCACAGA | + |
|
Preference number: 3 (lower is better) Translates to: ITFVGTPARGQQ*PYAISPSIVHR Trigger: TCTGTGAACAATAGAAGGGGAAATAGCATAAGGTCACTGTTGACCTCTTGCTGGAGTTCCTACAAATGTTAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR TCA 72 bp | GATATAGCACTTTTCCTTTTATGTTCATCAAGACACTaGCTGGACTATCTCTCTTGGCCTATACATATCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DIALFLLCSSRH*LDYLSWPIHIC Trigger: GCAGATATGTATAGGCCAAGAGAGATAGTCCAGTCAGTGTCTTGATGAACATAAAAGGAAAAGTGCTATATC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CCA 72 bp | ATCTGCATATCCCTGACACTTGTTGGAAATATATCATaGCAATCTACTTTTATTTACAGAGGGGTGACAGTG | + |
|
Preference number: 3 (lower is better) Translates to: ICISLTLVGNIS*QSTFIYRGVTV Trigger: CACTGTCACCCCTCTGTAAATAAAAGTAGATTGCCATGATATATTTCCAACAAGTGTCAGGGATATGCAGAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAGGACAATGATAGAACAAAGCTTATGGGAGCAACCAACCAATATCTGGTTTACTTCATCACACAAGTaGGCAATGAATGAAATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: ERTMIEQSLWEQPTNIWFTSSHK*AMNEIL Trigger: GAGAATTTCATTCATTGCCAACTTGTGTGATGAAGT...AAACCAGATATTGGTTGGTTGCTCCCATAAGCTTTGTTCTATCATTGTCCTTTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CCA 72 bp | TTGGCCTATACATATCTGCATATCCCTGACACTTGTTaGAAATATATCATGGCAATCTACTTTTATTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: LAYTYLHIPDTC*KYIMAIYFYLQ Trigger: CTGTAAATAAAAGTAGATTGCCATGATATATTTCCAACAAGTGTCAGGGATATGCAGATATGTATAGGCCAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGCTGTTTCAGGAACGTTaGTGGGAACAGTGTGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRLFQER*WEQCGS Trigger: GCTGCCACACTGTTCCCATCAACGTTCCTGAAACAG...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CAA 72 bp | CCACAACCCTCCTTTTTCCTAGGTCATGGCAAATTCTaGCATGTGAAAATGCCACGGTTCCAGGAGACTAAG | + |
|
Preference number: 4 (lower is better) Translates to: PQPSFFLGHGKF*HVKMPRFQETK Trigger: CTTAGTCTCCTGGAACCGTGGCATTTTCACATGCAAGAATTTGCCATGACCTAGGAAAAAGGAGGGTTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR TCA 90 bp | CATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTTTTCCCCCACAGGAAGAGATTTaGCATCAACAGCATCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HVKTSRPLLFVTAVRLFPPQEEI*HQQHQE Trigger: CTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGG...GGGAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGAGTCCTTCAGATCACTaGGAACAGCCTCACTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRSPSDH*EQPHWH Trigger: ATGCCAGTGAGGCTGTTCTCAGTGATCTGAAGGACT...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CCA 90 bp | GACACAAAACAGAGGAATACCTTCAAAGGACTGGCAGGAACCAGGCAATGTTTACCTATAAGGGCATTCTaGCAAAGCACTGAGTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: DTKQRNTFKGLAGTRQCLPIRAF*QSTEFC Trigger: ACAGAACTCAGTGCTTTGCCAGAATGCCCTTATAGG...TAAACATTGCCTGGTTCCTGCCAGTCCTTTGAAGGTATTCCTCTGTTTTGTGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR TCA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGATTCTGGCAAAGCACTaGGTTCTGTCACTAGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRILAKH*VLSLDV Trigger: AACATCTAGTGACAGAACTCAGTGCTTTGCCAGAAT...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CCA 90 bp | GTAGGGTGTTACAGAAGGCAAGGTACATTGAAGTTATCTGACACAAAACAGAGGCAGGCTAGCAGCATATaGAGCACCATTTTCAAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: VGCYRRQGTLKLSDTKQRQASSI*STIFKN Trigger: GTTTTTGAAAATGGTGCTCCATATGCTGCTAGCCTG...CCTCTGTTTTGTGTCAGATAACTTCAATGTACCTTGCCTTCTGTAACACCCTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CAA 72 bp | AACAAAGCTTATGGGAGCAACCAACCAATATCTGGTTaGAGTGAAGACTCACTCTGTGAGATGAATCCCATA | + |
|
Preference number: 4 (lower is better) Translates to: NKAYGSNQPISG*SEDSLCEMNPI Trigger: TATGGGATTCATCTCACAGAGTGAGTCTTCACTCAAACCAGATATTGGTTGGTTGCTCCCATAAGCTTTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CCA 90 bp | AAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTTTTCCCTACCATCTCCAGAAAGTACAGTaGCATTATCAAACAAGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KTSRPLLFVTAVRLFPYHLQKVQ*HYQTSP Trigger: AGGACTTGTTTGATAATGCCACTGTACTTTCTGGAG...ATGGTAGGGAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CCA 90 bp | CTAGGTACCAATGTGATTTTCCTAATGGGCCTACATGAAGAGAATAACATTTGTTTGATGGGAACAGTGTaGCAGCTGTTGAAAGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGTNVIFLMGLHEENNICLMGTV*QLLKAL Trigger: CAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAA...ACAAATGTTATTCTCTTCATGTAGGCCCATTAGGAAAATCACATTGGTACCTAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR TCA 90 bp | TCTTGTTTGCTTAAAGGCAACTGGCAAGATGAACTCCCCTTAAACAATCACAATAGTTTCTTTATCAGCTaGCTTCAGGGAGTCCAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SCLLKGNWQDELPLNNHNSFFIS*LQGVQI Trigger: GATTTGGACTCCCTGAAGTCAGCTGATAAAGAAACT...ATTGTGATTGTTTAAGGGGAGTTCATCTTGCCAGTTGCCTTTAAGCAAACAAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| 3UTR CAA 72 bp | TTTATGTTCATCAAGACACTGACTGGACTATCTCTCTaGGCCTATACATATCTGCATATCCCTGACACTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FMFIKTLTGLSL*AYTYLHIPDTC Trigger: ACAAGTGTCAGGGATATGCAGATATGTATAGGCCAAGAGAGATAGTCCAGTCAGTGTCTTGATGAACATAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS TCA 90 bp | GGCATTTATGGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTTaGCATCAACAGCATCAGGAGAGTCCAGGAGCACGGTTGGATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GIYGCRGHLLPQEEI*HQQHQESPGARLDQ Trigger: TTGATCCAACCGTGCTCCTGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCCATAAATGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021776.4 |
||
| CDS TCA 90 bp | CTTCGGCCTTTGATAGGATCCTATAAGGGCATTCTGGCAAAGCACTaGGTTCTGTCACTAGATGTTTCAGAGGCTCTTTCCAGGCTAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LRPLIGSYKGILAKH*VLSLDVSEALSRLA Trigger: TGCTAGCCTGGAAAGAGCCTCTGAAACATCTAGTGACAGAACTCAGTGCTTTGCCAGAATGCCCTTATAGGATCCTATCAAAGGCCGAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS-3UTR CAA 90 bp | GACACAAAACAGAGGAATACCTTCAAAGGACTGGCAGGAACCAGGCAATGTTTACCCACAGGAAGAGATTaGACATCAACAGCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: DTKQRNTFKGLAGTRQCLPTGRD*TSTASG Trigger: TCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGG...TAAACATTGCCTGGTTCCTGCCAGTCCTTTGAAGGTATTCCTCTGTTTTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CAA 90 bp | CATGTGAAAACAAGTAGACCTCTCCTCTTTGTGACTGCTGTTAGGCTTTTTCCCACAGTGTGGCAGCTGTaGAAAGCCTTGGTTATATTC | + |
|
Preference number: 5 (lower is better) Translates to: HVKTSRPLLFVTAVRLFPTVWQL*KALVIF Trigger: GAATATAACCAAGGCTTTCAACAGCTGCCACACTGT...GGGAAAAAGCCTAACAGCAGTCACAAAGAGGAGAGGTCTACTTGTTTTCACATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS-3UTR CAA 90 bp | GAGATGAATCCCATACCTGACACTGCTGATGTAATCAGAAATCTGAGACTAGATGAAGGTCTTTGTTTTTaGCCTCAATGGCTTCGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: EMNPIPDTADVIRNLRLDEGLCF*PQWLRP Trigger: AGGCCGAAGCCATTGAGGCAAAAAACAAAGACCTTC...ATCTAGTCTCAGATTTCTGATTACATCAGCAGTGTCAGGTATGGGATTCATCTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS TCA 90 bp | CAGAGTAGCAGACATCATCATAAAGAAGCAGACATTTTAGGAAATTaGCTAGAAAATCAACTGTTTCTAGGTCAATACGCAGGCAGAAGG | + |
|
Preference number: 5 (lower is better) Translates to: QSSRHHHKEADILGN*LENQLFLGQYAGRR Trigger: CCTTCTGCCTGCGTATTGACCTAGAAACAGTTGATTTTCTAGTCAATTTCCTAAAATGTCTGCTTCTTTATGATGATGTCTGCTACTCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS GCA 90 bp | GTGTGGCAGCTGTTGAAAGCCTTGGTTATATTCTCCGTACTCTTGTaGAAATCTAATATAATCTTATTGAACGTCTCTGAAGAGAATGAG | + |
|
Preference number: 5 (lower is better) Translates to: VWQLLKALVIFSVLL*KSNIILLNVSEENE Trigger: CTCATTCTCTTCAGAGACGTTCAATAAGATTATATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGTTTGCTTAAAGGCAACTGGCAAGATGAACTCCCCTTAAACAATCACAATTTCATGAAAAATTCTTaGCGCATGATTACACCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: SCLLKGNWQDELPLNNHNFMKNS*RMITPS Trigger: GCTTGGTGTAATCATGCGCAAAGAATTTTTCATGAA...ATTGTGATTGTTTAAGGGGAGTTCATCTTGCCAGTTGCCTTTAAGCAAACAAGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS TCA 72 bp | GGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTTaGCATCAACAGCATCAGGAGAGTCCAGGAGCACGG | + |
|
Preference number: 6 (lower is better) Translates to: GCRGHLLPQEEI*HQQHQESPGAR Trigger: CCGTGCTCCTGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021776.4 |
||
| CDS CAA 72 bp | TGGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTaGACATCAACAGCATCAGGAGAGTCCAGGAGCACG | + |
|
Preference number: 6 (lower is better) Translates to: WVQRTPSPTGRD*TSTASGESRST Trigger: CGTGCTCCTGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021776.4 |
||
| CDS CAA 72 bp | TGGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTaGACATCAACAGCATCAGGAGAGTCCCTGAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: WVQRTPSPTGRD*TSTASGESLRS Trigger: GCTCCTCAGGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | TGGCATTTATGGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTaGACATCAACAGCATCAGGAGAGTCCCTGAGGAGCACGGTTGGA | + |
|
Preference number: 6 (lower is better) Translates to: WHLWVQRTPSPTGRD*TSTASGESLRSTVG Trigger: TCCAACCGTGCTCCTCAGGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCCATAAATGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | TGGCATTTATGGGTGCAGAGGACACCTTCTCCCACAGGAAGAGATTaGACATCAACAGCATCAGGAGAGTCCAGGAGCACGGTTGGATCA | + |
|
Preference number: 6 (lower is better) Translates to: WHLWVQRTPSPTGRD*TSTASGESRSTVGS Trigger: TGATCCAACCGTGCTCCTGGACTCTCCTGATGCTGTTGATGTCAAATCTCTTCCTGTGGGAGAAGGTGTCCTCTGCACCCATAAATGCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000021776.4 |
||
| CDS CAA 72 bp | GATGTCTTTCGGACATCCTCAACTGTTTCAGGAACGTaGATGGGAACAGTGTGGCAGCTGTTGAAAGCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DVFRTSSTVSGT*MGTVWQLLKAL Trigger: CAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGTTCCTGAAACAGTTGAGGATGTCCGAAAGACATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS TCA 72 bp | GTACAGTGGCATTATCAAACAAGTCCTTCAGATCACTaGGAACAGCCTCACTGGCATTTATGGGTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: VQWHYQTSPSDH*EQPHWHLWVQR Trigger: CCTCTGCACCCATAAATGCCAGTGAGGCTGTTCTCAGTGATCTGAAGGACTTGTTTGATAATGCCACTGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CCA 72 bp | TCCTCAACTGTTTCAGGAACGTTGATGGGAACAGTGTaGCAGCTGTTGAAAGCCTTGGTTATATTCTCCGTA | + |
|
Preference number: 6 (lower is better) Translates to: SSTVSGTLMGTV*QLLKALVIFSV Trigger: TACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGTTCCTGAAACAGTTGAGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | TCTTCAAACGATGTCTTTCGGACATCCTCAACTGTTTCAGGAACGTaGATGGGAACAGTGTGGCAGCTGTTGAAAGCCTTGGTTATATTC | + |
|
Preference number: 6 (lower is better) Translates to: SSNDVFRTSSTVSGT*MGTVWQLLKALVIF Trigger: GAATATAACCAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGTTCCTGAAACAGTTGAGGATGTCCGAAAGACATCGTTTGAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | TCCTCAACTGTTTCAGGAACGTTGATGGGAACAGTGTGGCAGCTGTaGAAAGCCTTGGTTATATTCTCCGTACTCTTGTGCAAATCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: SSTVSGTLMGTVWQL*KALVIFSVLLCKSN Trigger: ATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGTTCCTGAAACAGTTGAGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CCA 72 bp | AGATGTTTCAGAGGCTCTTTCCAGGCTAGCAGCATATaGAGCACCATTTTCAAAAACTCTTCAAACGATGTC | + |
|
Preference number: 6 (lower is better) Translates to: RCFRGSFQASSI*STIFKNSSNDV Trigger: GACATCGTTTGAAGAGTTTTTGAAAATGGTGCTCCATATGCTGCTAGCCTGGAAAGAGCCTCTGAAACATCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 72 bp | ACGTTGATGGGAACAGTGTGGCAGCTGTTGAAAGCCTaGGTTATATTCTCCGTACTCTTGTGCAAATCTAAT | + |
|
Preference number: 6 (lower is better) Translates to: TLMGTVWQLLKA*VIFSVLLCKSN Trigger: ATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | GTTTCAGGAACGTTGATGGGAACAGTGTGGCAGCTGTTGAAAGCCTaGGTTATATTCTCCGTACTCTTGTGCAAATCTAATATAATCTTA | + |
|
Preference number: 6 (lower is better) Translates to: VSGTLMGTVWQLLKA*VIFSVLLCKSNIIL Trigger: TAAGATTATATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACACTGTTCCCATCAACGTTCCTGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 90 bp | ACAGTGTGGCAGCTGTTGAAAGCCTTGGTTATATTCTCCGTACTCTaGTGCAAATCTAATATAATCTTATTGAACGTCTCTGAAGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: TVWQLLKALVIFSVL*CKSNIILLNVSEEN Trigger: ATTCTCTTCAGAGACGTTCAATAAGATTATATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTGCCACACTGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS CAA 72 bp | CAGCTGTTGAAAGCCTTGGTTATATTCTCCGTACTCTaGTGCAAATCTAATATAATCTTATTGAACGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: QLLKALVIFSVL*CKSNIILLNVS Trigger: AGAGACGTTCAATAAGATTATATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAGCTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||
| CDS GCA 72 bp | CTGTTGAAAGCCTTGGTTATATTCTCCGTACTCTTGTaGAAATCTAATATAATCTTATTGAACGTCTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LLKALVIFSVLL*KSNIILLNVSE Trigger: TTCAGAGACGTTCAATAAGATTATATTAGATTTGCACAAGAGTACGGAGAATATAACCAAGGCTTTCAACAG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021776.4 ENSMUST00000224026.2 |
||