Pregenerated sensors for PRL7C1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060738Ensembl transcript IDs: ENSMUST00000072943.5
Found 32 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAAGGTTTCTGGAACACTaGGGGAAAATGTGTGGCAGC | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKERFLEH*GKMCGS Trigger: GCTGCCACACATTTTCCCTCAGTGTTCCAGAAACCT...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAGTCACACCCTCCCACTaGAGTAGGTTTGACATCAAC | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEVTPSH*SRFDIN Trigger: GTTGATGTCAAACCTACTCCAGTGGGAGGGTGTGAC...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAATGTGTGGCAGCTGTTaGGAGTCTCAATCATGTGCT | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEMCGSC*ESQSCA Trigger: AGCACATGATTGAGACTCTCAACAGCTGCCACACAT...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAACAGGAAGTCTTCAAGTaGGATCTTTCTGGCTTCCTC | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEQEVFK*DLSGFL Trigger: GAGGAAGCCAGAAAGATCTCACTTGAAGACTTCCTG...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAACCTCAATGTGGTGAATaGAAGCAGAAGTCACACCCT | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEPQCGE*KQKSHP Trigger: AGGGTGTGACTTCTGCTTCCATTCACCACATTGAGG...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAACTGAGGGAAAATGTGTaGCAGCTGTTGAGAGTCTCA | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKELRENV*QLLRVS Trigger: TGAGACTCTCAACAGCTGCCACACATTTTCCCTCAG...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATCATCCTCAATGTGGTaGATGGAAGCAGAAGTCACA | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKESSSMW*MEAEVT Trigger: TGTGACTTCTGCTTCCATTCACCACATTGAGGATGA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAAGCCATGGTGTCATTTaGGAGTTTGATGGCTTGATC | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKESHGVI*EFDGLI Trigger: GATCAAGCCATCAAACTCTCAAATGACACCATGGCT...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAACAAGTGAGATCTTTCTaGCTTCCTCCAAGGTTTCTG | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEQVRSF*LPPRFL Trigger: CAGAAACCTTGGAGGAAGCCAGAAAGATCTCACTTG...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAGAGAGTTTGATGGCTTaGTCAAACAAGTCTTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEESLMA*SNKSLR Trigger: CCTCAAAGACTTGTTTGATCAAGCCATCAAACTCTC...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATTCCTCCAAGGTTTCTaGAACACTGAGGGAAAATGT | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEFLQGF*NTEGKC Trigger: ACATTTTCCCTCAGTGTTCCAGAAACCTTGGAGGAA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATGTCATTTGAGAGTTTaGTGGCTTGATCAAACAAGT | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKECHLRV*WLDQTS Trigger: ACTTGTTTGATCAAGCCATCAAACTCTCAAATGACA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR TCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATTTTCTGAACATATTTaGGGAGAAGCCATCAGAGAA | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEFSEHI*GEAIRE Trigger: TTCTCTGATGGCTTCTCCTCAAATATGTTCAGAAAA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CCA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATCAATCATGTGCTTATaGTCCTTGAGAAAATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: HHSTSWHHLCDGIIEWKESIMCL*SLRKSN Trigger: ATTGGATTTTCTCAAGGACCATAAGCACATGATTGA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CAA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAACCCACTGGAGTAGGTTaGACATCAACAACATTGGGA | + |
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Preference number: 5 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEPTGVG*TSTTLG Trigger: TCCCAATGTTGTTGATGTCAAACCTACTCCAGTGGG...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CAA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAAAGGGTCCTGATGGCGTaGGCTCTTATTAAAATTGCA | + |
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Preference number: 5 (lower is better) Translates to: HHSTSWHHLCDGIIEWKERVLMA*ALIKIA Trigger: TGCAATTTTAATAAGAGCCAACGCCATCAGGACCCT...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS-3UTR CAA 90 bp | CACCACTCCACAAGTTGGCATCACCTGTGTGATGGCATAATTGAATGGAAAGAATGGCTCTTATTAAAATaGCATCAGGGGCACCTTTCA | + |
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Preference number: 5 (lower is better) Translates to: HHSTSWHHLCDGIIEWKEWLLLK*HQGHLS Trigger: TGAAAGGTGCCCCTGATGCAATTTTAATAAGAGCCA...TTCTTTCCATTCAATTATGCCATCACACAGGTGATGCCAACTTGTGGAGTGGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS TCA 90 bp | CCAGGAATTCAATATGCTGACTATAATTTTCAGGAAGTCTTCAAGTaGGATCTTTCTGGCTTCCTCCAAGGTTTCTGGAACACTGAGGGA | + |
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Preference number: 5 (lower is better) Translates to: PGIQYADYNFQEVFK*DLSGFLQGFWNTEG Trigger: TCCCTCAGTGTTCCAGAAACCTTGGAGGAAGCCAGAAAGATCTCACTTGAAGACTTCCTGAAAATTATAGTCAGCATATTGAATTCCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CCA 90 bp | ATTGCATCAGGGGCACCTTTCATACAGTGGAGTTCAGTCTCTAGGTaGTACAGTGGTTTATTCCAGGAATTCAATATGCTGACTATAATT | + |
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Preference number: 5 (lower is better) Translates to: IASGAPFIQWSSVSR*YSGLFQEFNMLTII Trigger: AATTATAGTCAGCATATTGAATTCCTGGAATAAACCACTGTACCACCTAGAGACTGAACTCCACTGTATGAAAGGTGCCCCTGATGCAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CCA 72 bp | GGTACGCCTCACCATAGTCATCCTCAATGTGGTGAATaGAAGCAGAAGTCACACCCTCCCACTGGAGTAGGT | + |
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Preference number: 6 (lower is better) Translates to: GTPHHSHPQCGE*KQKSHPPTGVG Trigger: ACCTACTCCAGTGGGAGGGTGTGACTTCTGCTTCCATTCACCACATTGAGGATGACTATGGTGAGGCGTACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 90 bp | CAGAAGTCACACCCTCCCACTGGAGTAGGTTTGACATCAACAACATaGGGAGCATTGCTAAGAATGATGGATGAGTCAAAGACAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: QKSHPPTGVGLTSTT*GALLRMMDESKTAA Trigger: TGCTGCTGTCTTTGACTCATCCATCATTCTTAGCAATGCTCCCAATGTTGTTGATGTCAAACCTACTCCAGTGGGAGGGTGTGACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 90 bp | TGTGGTGAATGGAAGCAGAAGTCACACCCTCCCACTGGAGTAGGTTaGACATCAACAACATTGGGAGCATTGCTAAGAATGATGGATGAG | + |
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Preference number: 6 (lower is better) Translates to: CGEWKQKSHPPTGVG*TSTTLGALLRMMDE Trigger: CTCATCCATCATTCTTAGCAATGCTCCCAATGTTGTTGATGTCAAACCTACTCCAGTGGGAGGGTGTGACTTCTGCTTCCATTCACCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CCA 72 bp | TCCTCCAAGGTTTCTGGAACACTGAGGGAAAATGTGTaGCAGCTGTTGAGAGTCTCAATCATGTGCTTATGG | + |
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Preference number: 6 (lower is better) Translates to: SSKVSGTLRENV*QLLRVSIMCLW Trigger: CCATAAGCACATGATTGAGACTCTCAACAGCTGCCACACATTTTCCCTCAGTGTTCCAGAAACCTTGGAGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | TGGAAGCAGAAGTCACACCCTCCCACTGGAGTAGGTTaGACATCAACAACATTGGGAGCATTGCTAAGAATG | + |
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Preference number: 6 (lower is better) Translates to: WKQKSHPPTGVG*TSTTLGALLRM Trigger: CATTCTTAGCAATGCTCCCAATGTTGTTGATGTCAAACCTACTCCAGTGGGAGGGTGTGACTTCTGCTTCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CCA 72 bp | GGGGCACCTTTCATACAGTGGAGTTCAGTCTCTAGGTaGTACAGTGGTTTATTCCAGGAATTCAATATGCTG | + |
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Preference number: 6 (lower is better) Translates to: GAPFIQWSSVSR*YSGLFQEFNML Trigger: CAGCATATTGAATTCCTGGAATAAACCACTGTACCACCTAGAGACTGAACTCCACTGTATGAAAGGTGCCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | CACCCTCCCACTGGAGTAGGTTTGACATCAACAACATaGGGAGCATTGCTAAGAATGATGGATGAGTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: HPPTGVGLTSTT*GALLRMMDESK Trigger: CTTTGACTCATCCATCATTCTTAGCAATGCTCCCAATGTTGTTGATGTCAAACCTACTCCAGTGGGAGGGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | GTTTCTGGAACACTGAGGGAAAATGTGTGGCAGCTGTaGAGAGTCTCAATCATGTGCTTATGGTCCTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: VSGTLRENVWQL*RVSIMCLWSLR Trigger: TCTCAAGGACCATAAGCACATGATTGAGACTCTCAACAGCTGCCACACATTTTCCCTCAGTGTTCCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | GTCTCTAGAAGTTCTCTGTTTAGGGTCCTGATGGCGTaGGCTCTTATTAAAATTGCATCAGGGGCACCTTTC | + |
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Preference number: 6 (lower is better) Translates to: VSRSSLFRVLMA*ALIKIASGAPF Trigger: GAAAGGTGCCCCTGATGCAATTTTAATAAGAGCCAACGCCATCAGGACCCTAAACAGAGAACTTCTAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | ACTGGAGTAGGTTTGACATCAACAACATTGGGAGCATaGCTAAGAATGATGGATGAGTCAAAGACAGCAGCA | + |
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Preference number: 6 (lower is better) Translates to: TGVGLTSTTLGA*LRMMDESKTAA Trigger: TGCTGCTGTCTTTGACTCATCCATCATTCTTAGCAATGCTCCCAATGTTGTTGATGTCAAACCTACTCCAGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CCA 72 bp | CTTATTAAAATTGCATCAGGGGCACCTTTCATACAGTaGAGTTCAGTCTCTAGGTGGTACAGTGGTTTATTC | + |
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Preference number: 6 (lower is better) Translates to: LIKIASGAPFIQ*SSVSRWYSGLF Trigger: GAATAAACCACTGTACCACCTAGAGACTGAACTCCACTGTATGAAAGGTGCCCCTGATGCAATTTTAATAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS TCA 72 bp | CAATATGCTGACTATAATTTTCAGGAAGTCTTCAAGTaGGATCTTTCTGGCTTCCTCCAAGGTTTCTGGAAC | + |
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Preference number: 6 (lower is better) Translates to: QYADYNFQEVFK*DLSGFLQGFWN Trigger: GTTCCAGAAACCTTGGAGGAAGCCAGAAAGATCTCACTTGAAGACTTCCTGAAAATTATAGTCAGCATATTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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| CDS CAA 72 bp | CAGCTGTTGAGAGTCTCAATCATGTGCTTATGGTCCTaGAGAAAATCCAATACAATTTTTCTGAACATATTT | + |
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Preference number: 6 (lower is better) Translates to: QLLRVSIMCLWS*RKSNTIFLNIF Trigger: AAATATGTTCAGAAAAATTGTATTGGATTTTCTCAAGGACCATAAGCACATGATTGAGACTCTCAACAGCTG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072943.5 |
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