Pregenerated sensors for PRL7B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000021347Ensembl transcript IDs: ENSMUST00000080595.3
Found 5 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS TCA 90 bp | GATGGCATCATCAAAAAGGTCTTCGGTGAGCATTTCGCTAACACCTaGTCCACTGCCAATTGTGGGTACAGAGACCACGTCCTCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: DGIIKKVFGEHFANT*STANCGYRDHVLPQ Trigger: CTGTGGGAGGACGTGGTCTCTGTACCCACAATTGGCAGTGGATCAGGTGTTAGCGAAATGCTCACCGAAGACCTTTTTGATGATGCCATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080595.3 |
||
| CDS CAA 72 bp | TGGGTACAGAGACCACGTCCTCCCACAGGAGAAGATTaGACATCAACAGTATCTGCAGTGCCCAGAAGCACA | + |
|
Preference number: 6 (lower is better) Translates to: WVQRPRPPTGED*TSTVSAVPRST Trigger: TGTGCTTCTGGGCACTGCAGATACTGTTGATGTCAAATCTTCTCCTGTGGGAGGACGTGGTCTCTGTACCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080595.3 |
||
| CDS CCA 72 bp | ATCTTTGACTCTTGCAAGGATAGCAAAGGGCGCCCCTaGCATACTCTTGAGTTCTGTCTCCATGTGATGCAG | + |
|
Preference number: 6 (lower is better) Translates to: IFDSCKDSKGRP*HTLEFCLHVMQ Trigger: CTGCATCACATGGAGACAGAACTCAAGAGTATGCCAGGGGCGCCCTTTGCTATCCTTGCAAGAGTCAAAGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080595.3 |
||
| CDS TCA 72 bp | ATCAAAAAGGTCTTCGGTGAGCATTTCGCTAACACCTaGTCCACTGCCAATTGTGGGTACAGAGACCACGTC | + |
|
Preference number: 6 (lower is better) Translates to: IKKVFGEHFANT*STANCGYRDHV Trigger: GACGTGGTCTCTGTACCCACAATTGGCAGTGGATCAGGTGTTAGCGAAATGCTCACCGAAGACCTTTTTGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080595.3 |
||
| CDS CCA 72 bp | TCCTTTTCTGTCTTTGGTGATTTGAGTGGCAAAGTGTaGCAACTGTTGAGACCATTGACAACAAATTCATCA | + |
|
Preference number: 6 (lower is better) Translates to: SFSVFGDLSGKV*QLLRPLTTNSS Trigger: TGATGAATTTGTTGTCAATGGTCTCAACAGTTGCCACACTTTGCCACTCAAATCACCAAAGACAGAAAAGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080595.3 |
||