Pregenerated sensors for PRL2C2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000079092

Ensembl transcript IDs: ENSMUST00000110594.4, ENSMUST00000220558.2, ENSMUST00000221612.2

Found 3 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type	Sensor	Details
CDS TCA 90 bp	CATCCAAAATCATGGCTCCTGATTTCAGAAGAGCTGAATAGTGTGTaGGCCTGGCTTGTTCCTTGTTTTCTGGAGTTGGAAGGAAAGAAG	+
Preference number: 5 (lower is better) Translates to: HPKSWLLISEELNSV*AWLVPCFLELEGKK Trigger: CTTCTTTCCTTCCAACTCCAGAAAACAAGGAACAAGCCAGGCTCACACACTATTCAGCTCTTCTGAAATCAGGAGCCATGATTTTGGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110594.4 ENSMUST00000220558.2
CDS CCA 72 bp	GTGTGTGAGCCTGGCTTGTTCCTTGTTTTCTGGAGTTaGAAGGAAAGAAGTATTGCATCTCATGGGGCTTTT	+
Preference number: 6 (lower is better) Translates to: VCEPGLFLVFWS*KERSIASHGAF Trigger: AAAAGCCCCATGAGATGCAATACTTCTTTCCTTCCAACTCCAGAAAACAAGGAACAAGCCAGGCTCACACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000110594.4 ENSMUST00000220558.2
CDS TCA 72 bp	TCAGTGAACAGTTCTGAAACTTCTATACTGATATTATaGGACAAACTGCCGGCTAATTCAAATGTGTCTTCA	+
Preference number: 6 (lower is better) Translates to: SVNSSETSILIL*DKLPANSNVSS Trigger: TGAAGACACATTTGAATTAGCCGGCAGTTTGTCTCATAATATCAGTATAGAAGTTTCAGAACTGTTCACTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000110594.4 ENSMUST00000220558.2 ENSMUST00000221612.2

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