Pregenerated sensors for PRL2B1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000069258Ensembl transcript IDs: ENSMUST00000091678.3, ENSMUST00000102954.10
Found 31 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGAGGAGTCCTGGATGGTaGCATCCTTCTCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKLKGSFAVMSYKGASQKRSPGW*HPSQHR Trigger: CCTGTGCTGAGAAGGATGCCACCATCCAGGACTCCT...CTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAGGAGTCCTGGATGGTaGCATCCTTCTCAGCACAGG | + |
|
Preference number: 4 (lower is better) Translates to: REKLKGSFAVMSYKGASQRSPGW*HPSQHR Trigger: CCTGTGCTGAGAAGGATGCCACCATCCAGGACTCCT...CTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGAACATCTTCATTGCTTaGCTGCAAAGATGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLKGSFAVMSYKGASQKQNIFIA*LQRCQS Trigger: GGACTGGCATCTTTGCAGTCAAGCAATGAAGATGTT...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | AGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAACATCTTCATTGCTTaGCTGCAAAGATGCCAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: REKLKGSFAVMSYKGASQNIFIA*LQRCQS Trigger: GGACTGGCATCTTTGCAGTCAAGCAATGAAGATGTT...CTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGTCTTCATTGCTTGACTaGAAAGATGCCAGTCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKLKGSFAVMSYKGASQKSSLLD*KDASPD Trigger: GTCTGGACTGGCATCTTTGCAGTCAAGCAATGAAGA...CTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | TTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGATTCATCAAATTTTGCCTaGATTTCTCTGGCTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LKGSFAVMSYKGASQKQDSSNFA*ISLALE Trigger: CTCCAAAGCCAGAGAAATTCAGGCAAAATTTGATGA...ATCCTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR GCA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGAGCGAACATCTTCATTaGTTGACTGCAAAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLKGSFAVMSYKGASQKQSEHLH*LTAKMP Trigger: TGGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCT...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR GCA 90 bp | AAGACGAGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCAAGCGAACATCTTCATTaGTTGACTGCAAAGATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KTREKLKGSFAVMSYKGASEHLH*LTAKMP Trigger: TGGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCT...TGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCTCGTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CCA 90 bp | AGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGGCAGGCAGCGGATCATaGTATAAAAAGAAAAACAGC | + |
|
Preference number: 4 (lower is better) Translates to: REKLKGSFAVMSYKGASQAGSGS*YKKKNS Trigger: GCTGTTTTTCTTTTTATACCATGATCCGCTGCCTGC...CTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | AAGACGAGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCATCAAATTTTGCCTaGATTTCTCTGGCTTTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KTREKLKGSFAVMSYKGASSNFA*ISLALE Trigger: CTCCAAAGCCAGAGAAATTCAGGCAAAATTTGATGA...TGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCTCGTCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGTTTCCCTGGGCATACTaGTTATTAAATTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLKGSFAVMSYKGASQKQFPWAY*LLNSVK Trigger: CTTCACTGAATTTAATAATCAGTATGCCCAGGGAAA...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGCAAAAGACATGCTTTaGACTATTTTAACACCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KLKGSFAVMSYKGASQKQAKDML*TILTPV Trigger: GACAGGTGTTAAAATAGTTCAAAGCATGTCTTTTGC...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000091678.3 |
||
| CDS-3UTR GCA 90 bp | TTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGATGAGTTCATCAAATTTTaGCTGAATTTCTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: LKGSFAVMSYKGASQKQDEFIKF*LNFSGF Trigger: AAAGCCAGAGAAATTCAGGCAAAATTTGATGAACTC...ATCCTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR GCA 90 bp | GAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGGAGTTCATCAAATTTTaGCTGAATTTCTCTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: EKLKGSFAVMSYKGASQKEFIKF*LNFSGF Trigger: AAAGCCAGAGAAATTCAGGCAAAATTTGATGAACTC...CTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR TCA 90 bp | TTAAAGACGAGAGAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGTTTCCCTGGGCATACTaGTTATTAAATTCAGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LKTREKLKGSFAVMSYKGFPWAY*LLNSVK Trigger: CTTCACTGAATTTAATAATCAGTATGCCCAGGGAAA...CCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTCTCTCGTCTTTAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS TCA 90 bp | GCGGATCATGGTATAAAAAGAAAAACAGCGAACATCTTCATTGCTTaGCTGCAAAGATGCCAGTCCAGACCAGGCAGAGTAGGTCGCAAT | + |
|
Preference number: 5 (lower is better) Translates to: ADHGIKRKTANIFIA*LQRCQSRPGRVGRN Trigger: ATTGCGACCTACTCTGCCTGGTCTGGACTGGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCTGTTTTTCTTTTTATACCATGATCCGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGATGGCGTGATGATGCCCTaGAGGAAAGCATTTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKGSFAVMSYKGASQKQDGVMMP*RKAFES Trigger: TGACTCAAATGCTTTCCTCAAGGGCATCATCACGCC...ATCCTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CAA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGGCGTGATGATGCCCTaGAGGAAAGCATTTGAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: KLKGSFAVMSYKGASQKQGVMMP*RKAFES Trigger: TGACTCAAATGCTTTCCTCAAGGGCATCATCACGCC...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGGATGAACATCTTCATTGCTaGACTGCAAAGATGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: LKGSFAVMSYKGASQKQDEHLHC*TAKMPV Trigger: GACTGGCATCTTTGCAGTCAAGCAATGAAGATGTTC...ATCCTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CAA 90 bp | AAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGCAGCAGCGAACATCTTCATaGCTTGACTGCAAAGATGCC | + |
|
Preference number: 5 (lower is better) Translates to: KLKGSFAVMSYKGASQKQQRTSS*LDCKDA Trigger: GGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCTG...CTGCTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS-3UTR CAA 90 bp | GAGAAATTAAAAGGAAGCTTTGCCGTAATGTCTTATAAAGGGGCATCTCAGAAGGAACATCTTCATTGCTaGACTGCAAAGATGCCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: EKLKGSFAVMSYKGASQKEHLHC*TAKMPV Trigger: GACTGGCATCTTTGCAGTCAAGCAATGAAGATGTTC...CTTCTGAGATGCCCCTTTATAAGACATTACGGCAAAGCTTCCTTTTAATTTCTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS GCA 90 bp | CATGCTTTGAACTATTTTAACACCTGTCGTGAGTTCATCAAATTTTaGCTGAATTTCTCTGGCTTTGGAGATAAGAGAAGAAGTGTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: HALNYFNTCREFIKF*LNFSGFGDKRRSVS Trigger: GGAGACACTTCTTCTCTTATCTCCAAAGCCAGAGAAATTCAGGCAAAATTTGATGAACTCACGACAGGTGTTAAAATAGTTCAAAGCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS GCA 90 bp | TCTCTTTCCCTGGGCATACTGATTATTAAATTCAGTGAAGAGTTTTaGAGTTTCACTACTGACAACTTGAGACATAAAGGTTGTCAATGT | + |
|
Preference number: 5 (lower is better) Translates to: SLSLGILIIKFSEEF*SFTTDNLRHKGCQC Trigger: ACATTGACAACCTTTATGTCTCAAGTTGTCAGTAGTGAAACTGCAAAACTCTTCACTGAATTTAATAATCAGTATGCCCAGGGAAAGAGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS CAA 90 bp | AGCGGATCATGGTATAAAAAGAAAAACAGCGAACATCTTCATTGCTaGACTGCAAAGATGCCAGTCCAGACCAGGCAGAGTAGGTCGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SGSWYKKKNSEHLHC*TAKMPVQTRQSRSQ Trigger: TTGCGACCTACTCTGCCTGGTCTGGACTGGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCTGTTTTTCTTTTTATACCATGATCCGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS GCA 72 bp | TCATGGTATAAAAAGAAAAACAGCGAACATCTTCATTaGTTGACTGCAAAGATGCCAGTCCAGACCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: SWYKKKNSEHLH*LTAKMPVQTRQ Trigger: CTGCCTGGTCTGGACTGGCATCTTTGCAGTCAAGCAATGAAGATGTTCGCTGTTTTTCTTTTTATACCATGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS CAA 90 bp | TGCCTGAATTTCTCTGGCTTTGGAGATAAGAGAAGAAGTGTCTCCTaGCATTGTAGACATTTCATTCACAAGATGATTCAGAGCGTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: CLNFSGFGDKRRSVS*HCRHFIHKMIQSVR Trigger: ACGAACGCTCTGAATCATCTTGTGAATGAAATGTCTACAATGCAAGGAGACACTTCTTCTCTTATCTCCAAAGCCAGAGAAATTCAGGCA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS CAA 72 bp | TTCTCTGGCTTTGGAGATAAGAGAAGAAGTGTCTCCTaGCATTGTAGACATTTCATTCACAAGATGATTCAG | + |
|
Preference number: 6 (lower is better) Translates to: FSGFGDKRRSVS*HCRHFIHKMIQ Trigger: CTGAATCATCTTGTGAATGAAATGTCTACAATGCAAGGAGACACTTCTTCTCTTATCTCCAAAGCCAGAGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS CAA 72 bp | AGAGTAGGTCGCAATATCTCTCTCTCCAATCATGCTTaGAACTATTTTAACACCTGTCGTGAGTTCATCAAA | + |
|
Preference number: 6 (lower is better) Translates to: RVGRNISLSNHA*NYFNTCREFIK Trigger: TTTGATGAACTCACGACAGGTGTTAAAATAGTTCAAAGCATGATTGGAGAGAGAGATATTGCGACCTACTCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102954.10 |
||
| CDS TCA 72 bp | ATTTTAACACCTGTCGTGAGTTCATCAAATTTTGCCTaGATTTCTCTGGCTTTGGAGATAAGAGAAGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: ILTPVVSSSNFA*ISLALEIREEV Trigger: CACTTCTTCTCTTATCTCCAAAGCCAGAGAAATTCAGGCAAAATTTGATGAACTCACGACAGGTGTTAAAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS TCA 72 bp | TCAGTGAAGAGTTTTGCAGTTTCACTACTGACAACTTaGGACATAAAGGTTGTCAATGTAAGAAGTTTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVKSFAVSLLTT*DIKVVNVRSFS Trigger: AGAGAAACTTCTTACATTGACAACCTTTATGTCTCAAGTTGTCAGTAGTGAAACTGCAAAACTCTTCACTGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||
| CDS CAA 72 bp | TTCAGTGAAGAGTTTTGCAGTTTCACTACTGACAACTaGAGACATAAAGGTTGTCAATGTAAGAAGTTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: FSEEFCSFTTDN*RHKGCQCKKFL Trigger: GAGAAACTTCTTACATTGACAACCTTTATGTCTCAAGTTGTCAGTAGTGAAACTGCAAAACTCTTCACTGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000091678.3 ENSMUST00000102954.10 |
||