Pregenerated sensors for PRL2A1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022886Ensembl transcript IDs: ENSMUST00000023602.6
Found 35 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR TCA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTGCGTCCATTCCTTACTaGGCATATGGGCAGCACGGC | + |
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Preference number: 4 (lower is better) Translates to: YMGSIFIVKEDKHHWACIASIPY*AYGQHG Trigger: GCCGTGCTGCCCATATGCTCAGTAAGGAATGGACGC...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR TCA 90 bp | GTGACATACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGTGTCTGCATGGCTTaGCTCCCTGGTTTTGGAAGG | + |
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Preference number: 4 (lower is better) Translates to: VTYMGSIFIVKEDKHHWACVCMA*LPGFGR Trigger: CCTTCCAAAACCAGGGAGTCAAGCCATGCAGACACA...TGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTATGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR GCA 90 bp | GTGACATACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCACCTTCTGAGTGTCTCTaGCCTCACAGCGGATCATGT | + |
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Preference number: 4 (lower is better) Translates to: VTYMGSIFIVKEDKHHWAPSECL*PHSGSC Trigger: ACATGATCCGCTGTGAGGGCAGAGACACTCAGAAGG...TGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTATGTCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR TCA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAAGCAGTTTCAACCTTCTaGGTGTCTCTGCCCTCACAG | + |
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Preference number: 4 (lower is better) Translates to: KNSRKFHSNISSSSGSDEAVSTF*VSLPSQ Trigger: CTGTGAGGGCAGAGACACTCAGAAGGTTGAAACTGC...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CCA 90 bp | GTGACATACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCACAGGATGTGTCTGCATaGCTTGACTCCCTGGTTTTG | + |
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Preference number: 4 (lower is better) Translates to: VTYMGSIFIVKEDKHHWAQDVSA*LDSLVL Trigger: CAAAACCAGGGAGTCAAGCCATGCAGACACATCCTG...TGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTATGTCAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR TCA 90 bp | GTGACATACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCAAATATCTTCAGTCTCTaGCTTCAAGGATGCCAGTCC | + |
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Preference number: 4 (lower is better) Translates to: VTYMGSIFIVKEDKHHWANIFSL*LQGCQS Trigger: GGACTGGCATCCTTGAAGTCAGAGACTGAAGATATT...TGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTATGTCAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR TCA 90 bp | GTGACATACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTTCACCATCTTaGGAGCAGTTTCAACCTTCT | + |
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Preference number: 4 (lower is better) Translates to: VTYMGSIFIVKEDKHHWACISPS*EQFQPS Trigger: AGAAGGTTGAAACTGCTCTCAAGATGGTGAAATGCA...TGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTATGTCAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR GCA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAATGGTTCAGAGGGACTTaGCAGGCTCTCAATAATTTG | + |
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Preference number: 4 (lower is better) Translates to: KNSRKFHSNISSSSGSDEWFRGT*QALNNL Trigger: CAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCA...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR GCA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTCCTCCAGGAGTCCATTaGTCTTTTCCTCAATCTCTT | + |
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Preference number: 4 (lower is better) Translates to: YMGSIFIVKEDKHHWACIPPGVH*SFPQSL Trigger: AAGAGATTGAGGAAAAGAGCAATGGACTCCTGGAGG...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR TCA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAAGACTATCAAATGCAGTaGAGAGTTCAAAGGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: KNSRKFHSNISSSSGSDEDYQMQ*RVQRLF Trigger: AAAAAGCCTTTGAACTCTTCACTGCATTTGATAGTC...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR GCA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTTCTGTATCTCCATTTTaGATTTGGATGAGAATGCTC | + |
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Preference number: 4 (lower is better) Translates to: YMGSIFIVKEDKHHWACISVSPF*IWMRML Trigger: GAGCATTCTCATCCAAATGCAAAATGGAGATACAGA...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CCA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTTCTCCATTTTGCATTTaGATGAGAATGCTCTTAACT | + |
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Preference number: 4 (lower is better) Translates to: YMGSIFIVKEDKHHWACISPFCI*MRMLLT Trigger: AGTTAAGAGCATTCTCATCCAAATGCAAAATGGAGA...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS TCA 90 bp | GCGGATCATGTTATAATATGCAAAGAGGCGAATATCTTCAGTCTCTaGCTTCAAGGATGCCAGTCCAGACCAGCCAGGGTAGTTCTCATC | + |
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Preference number: 5 (lower is better) Translates to: ADHVIICKEANIFSL*LQGCQSRPARVVLI Trigger: GATGAGAACTACCCTGGCTGGTCTGGACTGGCATCCTTGAAGTCAGAGACTGAAGATATTCGCCTCTTTGCATATTATAACATGATCCGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS GCA 90 bp | TGTTCACTAGATGGTTCAGAGGGACTTGCCAGGCTCTCAATAATTTaGTTGCTAATTTCAGTAGGGTTACAGGATGTGTCTGCATGGCTT | + |
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Preference number: 5 (lower is better) Translates to: CSLDGSEGLARLSII*LLISVGLQDVSAWL Trigger: AAGCCATGCAGACACATCCTGTAACCCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATCTAGTGAACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAACTTGACTCCCTGGTTTaGGAAGGTCGAGAGAAGATG | + |
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Preference number: 5 (lower is better) Translates to: KNSRKFHSNISSSSGSDELDSLV*EGREKM Trigger: CATCTTCTCTCGACCTTCCAAAACCAGGGAGTCAAG...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTATGTGTCTGCATGGCTaGACTCCCTGGTTTTGGAAG | + |
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Preference number: 5 (lower is better) Translates to: YMGSIFIVKEDKHHWACIMCLHG*TPWFWK Trigger: CTTCCAAAACCAGGGAGTCAAGCCATGCAGACACAT...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAACCCTCCAGGAGTCCATaGCTCTTTTCCTCAATCTCT | + |
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Preference number: 5 (lower is better) Translates to: KNSRKFHSNISSSSGSDEPSRSP*LFSSIS Trigger: AGAGATTGAGGAAAAGAGCAATGGACTCCTGGAGGG...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTCAGGCTCTCAATAATTaGCTTGCTAATTTCAGTAGG | + |
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Preference number: 5 (lower is better) Translates to: YMGSIFIVKEDKHHWACIQALNN*LANFSR Trigger: CCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTG...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | TACATGGGGTCAATTTTTATTGTGAAAGAAGATAAACACCACTGGGCATGCATTTTTTCCTCAATCTCTTaGGCTTTAGAGAGGATAGAA | + |
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Preference number: 5 (lower is better) Translates to: YMGSIFIVKEDKHHWACIFSSIS*ALERIE Trigger: TTCTATCCTCTCTAAAGCCAAAGAGATTGAGGAAAA...AATGCATGCCCAGTGGTGTTTATCTTCTTTCACAATAAAAATTGACCCCATGTA 37% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAAATCTCCATTTTGCATTaGGATGAGAATGCTCTTAAC | + |
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Preference number: 5 (lower is better) Translates to: KNSRKFHSNISSSSGSDEISILH*DENALN Trigger: GTTAAGAGCATTCTCATCCAAATGCAAAATGGAGAT...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS-3UTR CAA 90 bp | AAAAATTCAAGGAAGTTTCACAGCAATATATCATCAAGCAGTGGCTCAGACGAATTCTGTATCTCCATTTaGCATTTGGATGAGAATGCT | + |
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Preference number: 5 (lower is better) Translates to: KNSRKFHSNISSSSGSDEFCISI*HLDENA Trigger: AGCATTCTCATCCAAATGCAAAATGGAGATACAGAA...TTCGTCTGAGCCACTGCTTGATGATATATTGCTGTGAAACTTCCTTGAATTTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS TCA 72 bp | TTCTTCAAAGGAACCAAAGCAGCGTCCATTCCTTACTaGGCATATGGGCAGCACGGCCTCACTTTCCCACAG | + |
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Preference number: 6 (lower is better) Translates to: FFKGTKAASIPY*AYGQHGLTFPQ Trigger: CTGTGGGAAAGTGAGGCCGTGCTGCCCATATGCTCAGTAAGGAATGGACGCTGCTTTGGTTCCTTTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 90 bp | CAGTCCAGACCAGCCAGGGTAGTTCTCATCTTCTGTATCTCCATTTaGCATTTGGATGAGAATGCTCTTAACTCCCTCCAGGAGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: QSRPARVVLIFCISI*HLDENALNSLQESI Trigger: AATGGACTCCTGGAGGGAGTTAAGAGCATTCTCATCCAAATGCAAAATGGAGATACAGAAGATGAGAACTACCCTGGCTGGTCTGGACTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS TCA 72 bp | AATTTCAGTAGGGTTACAGGATGTGTCTGCATGGCTTaGCTCCCTGGTTTTGGAAGGTCGAGAGAAGATGTG | + |
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Preference number: 6 (lower is better) Translates to: NFSRVTGCVCMA*LPGFGRSREDV Trigger: CACATCTTCTCTCGACCTTCCAAAACCAGGGAGTCAAGCCATGCAGACACATCCTGTAACCCTACTGAAATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 90 bp | TCACTAGATGGTTCAGAGGGACTTGCCAGGCTCTCAATAATTTGCTaGCTAATTTCAGTAGGGTTACAGGATGTGTCTGCATGGCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: SLDGSEGLARLSIIC*LISVGLQDVSAWLD Trigger: GTCAAGCCATGCAGACACATCCTGTAACCCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATCTAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 90 bp | CTCTTAACTCCCTCCAGGAGTCCATTGCTCTTTTCCTCAATCTCTTaGGCTTTAGAGAGGATAGAAGGAGAGACGTTTTTCAAGGATGGC | + |
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Preference number: 6 (lower is better) Translates to: LLTPSRSPLLFSSIS*ALERIEGETFFKDG Trigger: GCCATCCTTGAAAAACGTCTCTCCTTCTATCCTCTCTAAAGCCAAAGAGATTGAGGAAAAGAGCAATGGACTCCTGGAGGGAGTTAAGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 90 bp | AGACCAGCCAGGGTAGTTCTCATCTTCTGTATCTCCATTTTGCATTaGGATGAGAATGCTCTTAACTCCCTCCAGGAGTCCATTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: RPARVVLIFCISILH*DENALNSLQESIAL Trigger: AAGAGCAATGGACTCCTGGAGGGAGTTAAGAGCATTCTCATCCAAATGCAAAATGGAGATACAGAAGATGAGAACTACCCTGGCTGGTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS TCA 72 bp | GTTATAATATGCAAAGAGGCGAATATCTTCAGTCTCTaGCTTCAAGGATGCCAGTCCAGACCAGCCAGGGTA | + |
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Preference number: 6 (lower is better) Translates to: VIICKEANIFSL*LQGCQSRPARV Trigger: TACCCTGGCTGGTCTGGACTGGCATCCTTGAAGTCAGAGACTGAAGATATTCGCCTCTTTGCATATTATAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CCA 72 bp | GAGACGTTTTTCAAGGATGGCAGGTTGTTCACTAGATaGTTCAGAGGGACTTGCCAGGCTCTCAATAATTTG | + |
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Preference number: 6 (lower is better) Translates to: ETFFKDGRLFTR*FRGTCQALNNL Trigger: CAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATCTAGTGAACAACCTGCCATCCTTGAAAAACGTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 72 bp | GGTTCAGAGGGACTTGCCAGGCTCTCAATAATTTGCTaGCTAATTTCAGTAGGGTTACAGGATGTGTCTGCA | + |
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Preference number: 6 (lower is better) Translates to: GSEGLARLSIIC*LISVGLQDVSA Trigger: TGCAGACACATCCTGTAACCCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 72 bp | CCAGCCAGGGTAGTTCTCATCTTCTGTATCTCCATTTaGCATTTGGATGAGAATGCTCTTAACTCCCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: PARVVLIFCISI*HLDENALNSLQ Trigger: CTGGAGGGAGTTAAGAGCATTCTCATCCAAATGCAAAATGGAGATACAGAAGATGAGAACTACCCTGGCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 90 bp | TTGTTCACTAGATGGTTCAGAGGGACTTGCCAGGCTCTCAATAATTaGCTTGCTAATTTCAGTAGGGTTACAGGATGTGTCTGCATGGCT | + |
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Preference number: 6 (lower is better) Translates to: LFTRWFRGTCQALNN*LANFSRVTGCVCMA Trigger: AGCCATGCAGACACATCCTGTAACCCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATCTAGTGAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS GCA 72 bp | GATGGTTCAGAGGGACTTGCCAGGCTCTCAATAATTTaGTTGCTAATTTCAGTAGGGTTACAGGATGTGTCT | + |
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Preference number: 6 (lower is better) Translates to: DGSEGLARLSII*LLISVGLQDVS Trigger: AGACACATCCTGTAACCCTACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS GCA 72 bp | GATGGCAGGTTGTTCACTAGATGGTTCAGAGGGACTTaGCAGGCTCTCAATAATTTGCTTGCTAATTTCAGT | + |
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Preference number: 6 (lower is better) Translates to: DGRLFTRWFRGT*QALNNLLANFS Trigger: ACTGAAATTAGCAAGCAAATTATTGAGAGCCTGGCAAGTCCCTCTGAACCATCTAGTGAACAACCTGCCATC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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| CDS CAA 72 bp | AGGGTAGTTCTCATCTTCTGTATCTCCATTTTGCATTaGGATGAGAATGCTCTTAACTCCCTCCAGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: RVVLIFCISILH*DENALNSLQES Trigger: GGACTCCTGGAGGGAGTTAAGAGCATTCTCATCCAAATGCAAAATGGAGATACAGAAGATGAGAACTACCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023602.6 |
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