Pregenerated sensors for PRKX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000035725Ensembl transcript IDs: ENSMUST00000036333.14, ENSMUST00000114044.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGGCTGCTTTTGCCTTACCACCCCTTCTTGCATGTTAACTACATaGACTGCAGAGGATCGAGGTTGGGTTGGTTCTCAGCATCCGCAG | + |
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Preference number: 1 (lower is better) Translates to: HGCFCLTTPSCMLTT*TAEDRGWVGSQHPQ Trigger: CTGCGGATGCTGAGAACCAACCCAACCTCGATCCTCTGCAGTCCATGTAGTTAACATGCAAGAAGGGGTGGTAAGGCAAAAGCAGCCATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR TCA 90 bp | AAAAGGGCATCGGATCCCATTACAGATAGTTGTGAGCCACCAGGTTaGTGCTGGGATTTGAACTCAGGACCTCCGGAAGAGCAGTCACTG | + |
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Preference number: 1 (lower is better) Translates to: KRASDPITDSCEPPG*CWDLNSGPPEEQSL Trigger: CAGTGACTGCTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCATCAACCTGGTGGCTCACAACTATCTGTAATGGGATCCGATGCCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR GCA 90 bp | AACTGGGAGACAGAGACAGAGCCCACACTCCTGTATCTTGTGCATTaGCAAGAGAGGGAAATTAGGGTGAATAAAACAACTGAGCTTGCC | + |
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Preference number: 1 (lower is better) Translates to: NWETETEPTLLYLVH*QEREIRVNKTTELA Trigger: GGCAAGCTCAGTTGTTTTATTCACCCTAATTTCCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCTCTGTCTCCCAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR TCA 90 bp | ATACAGCTCTGTACAAACTTTCATAGAAGTTCCCGGCCTGGAACCTaGGTTTTCACGGACGGACATGGCTGGGAGAACAAAGTTAAGATG | + |
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Preference number: 1 (lower is better) Translates to: IQLCTNFHRSSRPGT*VFTDGHGWENKVKM Trigger: CATCTTAACTTTGTTCTCCCAGCCATGTCCGTCCGTGAAAACTCAGGTTCCAGGCCGGGAACTTCTATGAAAGTTTGTACAGAGCTGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR GCA 90 bp | ATTATAAACCTTCAAGAAGCCAGGTTTAGTGGGAAGAAGTTAGATTaGTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: IINLQEARFSGKKLD*WRCPLQRHWDPRLF Trigger: GAAGAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCCACTAAACCTGGCTTCTTGAAGGTTTATAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR TCA 90 bp | CCACACTCCTGTATCTTGTGCATTGCCAAGAGAGGGAAATTAGGGTaGATAAAACAACTGAGCTTGCCTTCCTCATCTGCTCTTCCATCA | + |
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Preference number: 1 (lower is better) Translates to: PHSCILCIAKRGKLG*IKQLSLPSSSALPS Trigger: TGATGGAAGAGCAGATGAGGAAGGCAAGCTCAGTTGTTTTATTCACCCTAATTTCCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR TCA 90 bp | TTACACAATTTTTATCAGGTGTATACTTGCCTCCACAGCTACCAGTaGCCATCAGGAACAACCAACCTTCCCATCAACTGGGAGACAGAG | + |
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Preference number: 1 (lower is better) Translates to: LHNFYQVYTCLHSYQ*PSGTTNLPINWETE Trigger: CTCTGTCTCCCAGTTGATGGGAAGGTTGGTTGTTCCTGATGGTCACTGGTAGCTGTGGAGGCAAGTATACACCTGATAAAAATTGTGTAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR TCA 90 bp | TCTAAACTGGAAGATTGGAGGAAAGCCACACATTTGTGCTATATCTaGATAAGGGTCTGCAGGGCATGTGGCTTCCTGACTTCCAAGTTT | + |
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Preference number: 1 (lower is better) Translates to: SKLEDWRKATHLCYI*IRVCRACGFLTSKF Trigger: AAACTTGGAAGTCAGGAAGCCACATGCCCTGCAGACCCTTATTCAGATATAGCACAAATGTGTGGCTTTCCTCCAATCTTCCAGTTTAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR TCA 90 bp | TGTTTTGGTCCAATGTTGGGATATTTGCACAGCCAGAGGGTCCTGTaGACAGTATTAAGCCATCAAATCACATTCTACAGTGTAACATGT | + |
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Preference number: 1 (lower is better) Translates to: CFGPMLGYLHSQRVL*TVLSHQITFYSVTC Trigger: ACATGTTACACTGTAGAATGTGATTTGATGGCTTAATACTGTTCACAGGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR GCA 90 bp | CACAAGACTCATGAAGAAGGAGAAAACCTACAATTTAACAGGTTTTaGGAATTCTCATTGGGCAGGTTTCCAGTTGTTGAAATGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: HKTHEEGENLQFNRF*EFSLGRFPVVEMRL Trigger: CAGCCTCATTTCAACAACTGGAAACCTGCCCAATGAGAATTCGCAAAACCTGTTAAATTGTAGGTTTTCTCCTTCTTCATGAGTCTTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR GCA 90 bp | TATTGGCCTACAATTCCCTCGGCTACACCTAGATCTTGGGAATCTTaGTTTCAATGTTTACACAATTTTTATCAGGTGTATACTTGCCTC | + |
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Preference number: 1 (lower is better) Translates to: YWPTIPSATPRSWES*FQCLHNFYQVYTCL Trigger: GAGGCAAGTATACACCTGATAAAAATTGTGTAAACATTGAAAGCAAGATTCCCAAGATCTAGGTGTAGCCGAGGGAATTGTAGGCCAATA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR GCA 90 bp | CTCCTGTATGTGTTTGTTTGTTTGAGGTACATAACCCAGTTAGTTTaGATATTGGAAAGCACTGAGAAAGCTCACCAAAAATACAGCTCT | + |
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Preference number: 1 (lower is better) Translates to: LLYVFVCLRYITQLV*ILESTEKAHQKYSS Trigger: AGAGCTGTATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTGGGTTATGTACCTCAAACAAACAAACACATACAGGAG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR TCA 90 bp | TTGTTTGAGGTACATAACCCAGTTAGTTTGCATATTGGAAAGCACTaGGAAAGCTCACCAAAAATACAGCTCTGTACAAACTTTCATAGA | + |
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Preference number: 1 (lower is better) Translates to: LFEVHNPVSLHIGKH*ESSPKIQLCTNFHR Trigger: TCTATGAAAGTTTGTACAGAGCTGTATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTGGGTTATGTACCTCAAACAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR TCA 90 bp | AATCAACATATTTCAAATCTACAGTCAGAAGTGAGACCCTTTCTGTaGTTTTCACCTCAACATCAAGACCCACACAATGCTAAATTTTCA | + |
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Preference number: 1 (lower is better) Translates to: NQHISNLQSEVRPFL*FSPQHQDPHNAKFS Trigger: TGAAAATTTAGCATTGTGTGGGTCTTGATGTTGAGGTGAAAATCACAGAAAGGGTCTCACTTCTGACTGTAGATTTGAAATATGTTGATT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | TGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCAAACCTTCCCATCAACTaGGAGACAGAGACAGAGCCC | + |
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Preference number: 2 (lower is better) Translates to: WRVLRAPKELQLIASFPANLPIN*ETETEP Trigger: GGGCTCTGTCTCTGTCTCCCAGTTGATGGGAAGGTT...TGCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR TCA 90 bp | ATGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCATGAGTGACAGATCTTaGCATGAGCACACCCTGGCT | + |
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Preference number: 2 (lower is better) Translates to: MEGPEGSQRASVDSFLPSMSDRS*HEHTLA Trigger: AGCCAGGGTGTGCTCATGTCAAGATCTGTCACTCAT...GCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR TCA 90 bp | TTAGATTGCTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCTTCACACTCCACAGCTACCAGTaGCCATCAGGAACAACCAAC | + |
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Preference number: 2 (lower is better) Translates to: LDCWRCPLQRHWDPRLFTLHSYQ*PSGTTN Trigger: GTTGGTTGTTCCTGATGGTCACTGGTAGCTGTGGAG...TGTGAAGAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGATGGGGCTACAAAAGCCAAGCACACCTGGCACCTCCAGGAGCTGAAAGAGGTCATTTGTTCACCTTaGGTACTGATTAGCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: GDGATKAKHTWHLQELKEVICSP*VLISLG Trigger: CCCAAGGCTAATCAGTACCCAAGGTGAACAAATGAC...CTCTTTCAGCTCCTGGAGGTGCCAGGTGTGCTTGGCTTTTGTAGCCCCATCACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | CGGCATAGAACTGCCTATAAGTCCAGCTGTAGGGTCTCTGGTGCACTTGTTGGCAGTCAGATTGCAAGGTaGTTTAGGAGCACACAGAGG | + |
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Preference number: 2 (lower is better) Translates to: RHRTAYKSSCRVSGALVGSQIAR*FRSTQR Trigger: CCTCTGTGTGCTCCTAAAGCACCTTGCAATCTGACT...GCCAACAAGTGCACCAGAGACCCTACAGCTGGACTTATAGGCAGTTCTATGCCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | TTAGATTGCTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCTTCACATTCATAGGCCGTGTATaGAGCCATGTCTGTCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LDCWRCPLQRHWDPRLFTFIGRV*SHVCQE Trigger: CTCCTGACAGACATGGCTGCATACACGGCCTATGAA...TGTGAAGAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | ATGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCGGGAAGAAGTTAGATTaGTGGAGATGCCCTCTTCAA | + |
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Preference number: 2 (lower is better) Translates to: MEGPEGSQRASVDSFLPSGKKLD*WRCPLQ Trigger: TTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCC...GCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGAACTGCCTATAAGTCCAGCTGTAGGGTCTCTGGTGCACTTGTTGGCTGTGGCATGTGCGCATGTGTaGTCTCCCCATGTGTGTTTA | + |
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Preference number: 2 (lower is better) Translates to: IELPISPAVGSLVHLLAVACAHV*SPHVCL Trigger: TAAACACACATGGGGAGATCACACATGCGCACATGC...CACAGCCAACAAGTGCACCAGAGACCCTACAGCTGGACTTATAGGCAGTTCTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | TGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCAGTGAGTGCATCCATATaGCATGTATCTGCAGACTTA | + |
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Preference number: 2 (lower is better) Translates to: WRVLRAPKELQLIASFPAVSASI*HVSADL Trigger: TAAGTCTGCAGATACATGGCATATGGATGCACTCAC...TGCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR TCA 90 bp | GCCAGGTTTAGTGGGAAGAAGTTAGATTGCTGGAGATGCCCTCTTCAAAGACACGTTCACCTTGGGTACTaGTTAGCCTTGGGTGTCCAT | + |
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Preference number: 2 (lower is better) Translates to: ARFSGKKLDCWRCPLQRHVHLGY*LALGVH Trigger: ATGGACACCCAAGGCTAATCAGTACCCAAGGTGAAC...GTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCCACTAAACCTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | GGTGTATACTTGCCTCCACAGCTACCAGTGACCATCAGGAACAACCAACCTTCCCTTGCCTTCCTCATCTaGTCTTCCATCACTACTTAC | + |
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Preference number: 2 (lower is better) Translates to: GVYLPPQLPVTIRNNQPSLAFLI*SSITTY Trigger: GTAAGTAGTGATGGAAGAGCAGATGAGGAAGGCAAG...GGAAGGTTGGTTGTTCCTGATGGTCACTGGTAGCTGTGGAGGCAAGTATACACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | AAGAAGTTAGATTGCTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCGGGTGGGTAAGGAGATaGTTTCTTTCTCTTGACAGA | + |
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Preference number: 2 (lower is better) Translates to: KKLDCWRCPLQRHWDPRLGWVRR*FLSLDR Trigger: TCTGTCAAGAGAAAGAAAGCATCTCCTTACCCACCC...GAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | AACTGGGAGACAGAGACAGAGCCCACACTCCTGTATCTTGTGCATTGCCAAGAGCATATGCCATGTATCTaGAGACTTAGGAAAAAGGGG | + |
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Preference number: 2 (lower is better) Translates to: NWETETEPTLLYLVHCQEHMPCI*RLRKKG Trigger: CCCCTTTTTCCTAAGTCTGCAGATACATGGCATATG...CTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCTCTGTCTCCCAGTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGATTGCTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCTTCACAGCAGATGACCTTAAATaGAATGACAGTGACCTCATG | + |
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Preference number: 2 (lower is better) Translates to: LDCWRCPLQRHWDPRLFTADDLK*NDSDLM Trigger: CATGAGGTCACTGTCATTGCATTTAAGGTCATCTGC...TGTGAAGAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGATTGGTATGTTTTGGTCCAATGTTGGGATATTTGCACAGCCAGAGGGTCCTGCTGTGGTGTGGTATaGTGTGGTATCGATGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: GDWYVLVQCWDICTARGSCCGVV*CGIDVF Trigger: GAAGACATCGATACCACACCATACCACACCACAGCA...GGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACATACCAATCACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGAAAGGTTCTGGCCATTaGTGTGGTATGTTGTGCTGT | + |
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Preference number: 2 (lower is better) Translates to: HRGCMCACVISPCVFRIKKGSGH*CGMLCC Trigger: ACAGCACAACATACCACACCAATGGCCAGAACCTTT...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGTGGTGTGGTATGGTGTaGTATCGATGTCTTCACATA | + |
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Preference number: 2 (lower is better) Translates to: HRGCMCACVISPCVFRIKWCGMV*YRCLHI Trigger: TATGTGAAGACATCGATACCACACCATACCACACCA...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | TTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTTCCCTCCTGTATGCAGAGTTCTaGCTTAACTTTAGGAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: LGAQLSLDSELRTGHISLLYAEF*LNFRKG Trigger: TCCCTTCCTAAAGTTAAGCCAGAACTCTGCATACAG...GAGGGAAATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | AAGGTGTTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTCTTACCACCCCTTCTTaGATGTTAACTACATGGACT | + |
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Preference number: 2 (lower is better) Translates to: KVLGAQLSLDSELRTGHILTTPS*MLTTWT Trigger: AGTCCATGTAGTTAACATGCAAGAAGGGGTGGTAAG...AATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAACACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | AGGGGTGGATCCTTAAAGTTCCCTTGTGGGGATGTGGGTACATTTGTATTATCATGGTATGTTGTGCTGTaGTGTGGTATGGTGTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: RGGSLKFPCGDVGTFVLSWYVVL*CGMVWY Trigger: ATACCACACCATACCACACCACAGCACAACATACCA...TGATAATACAAATGTACCCACATCCCCACAAGGGAACTTTAAGGATCCACCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR CCA 90 bp | GGGATGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTTGCACCCAGGTGCTTCTGGCCATTGGTGTaGTATGTTGTGCTGTGGTGT | + |
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Preference number: 2 (lower is better) Translates to: GMWVHLYYHKKAIFAPRCFWPLV*YVVLWC Trigger: ACACCACAGCACAACATACCACACCAATGGCCAGAA...GCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACATCCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 90 bp | GAAGAAGGAGAAAACCTACAATTTAACAGGTTTTGCGAATTCTCATaGGGCAGGTTTCCAGTTGTTGAAATGAGGCTGGGTTCCAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: EEGENLQFNRFCEFS*GRFPVVEMRLGSKG Trigger: ACCCTTGGAACCCAGCCTCATTTCAACAACTGGAAACCTGCCCAATGAGAATTCGCAAAACCTGTTAAATTGTAGGTTTTCTCCTTCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR TCA 90 bp | GGTGATTGGTATGTTTTGGTCCAATGTTGGGATATTTGCACAGCCAGAGGGTCCTTTTTGCCTGTAGGGTaGAAGATTTTTCAGAAAGCT | + |
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Preference number: 2 (lower is better) Translates to: GDWYVLVQCWDICTARGSFLPVG*KIFQKA Trigger: AGCTTTCTGAAAAATCTTTCACCCTACAGGCAAAAA...GGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACATACCAATCACC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 90 bp | TTGTGGGGATGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTaGCACCCAGGTGCCATGCTGTATGCAGAGTTCTGGCTTAACTTT | + |
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Preference number: 2 (lower is better) Translates to: LWGCGYICIIIKRQS*HPGAMLYAEFWLNF Trigger: AAAGTTAAGCCAGAACTCTGCATACAGCATGGCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACATCCCCACAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | TTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTTCCCTCCCAAAATTTCCAGTTTaGACAATTTCTGTGCACATA | + |
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Preference number: 2 (lower is better) Translates to: LGAQLSLDSELRTGHISLPKFPV*TISVHI Trigger: TATGTGCACAGAAATTGTGCAAACTGGAAATTTTGG...GAGGGAAATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTGATTTTTAGGATTGGAGTCAGATTGCAAGGTGCTTTAGGAGCACACCAGGTTTCCAGTTGTTaGAATGAGGCTGGGTTCCAA | + |
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Preference number: 2 (lower is better) Translates to: FYLIFRIGVRLQGALGAHQVSSC*NEAGFQ Trigger: TTGGAACCCAGCCTCATTTCAACAACTGGAAACCTG...GTGTGCTCCTAAAGCACCTTGCAATCTGACTCCAATCCTAAAAATCAAATAAAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR TCA 90 bp | GGGATGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTTGCACCCAGGTGCCAAACACAAGACTCATaGAGAAGGAGAAAACCTACA | + |
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Preference number: 2 (lower is better) Translates to: GMWVHLYYHKKAIFAPRCQTQDS*RRRKPT Trigger: TGTAGGTTTTCTCCTTCTTCATGAGTCTTGTGTTTG...GCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR TCA 90 bp | TTTTATTTGATTTTTAGGATTGGAGTCAGATTGCAAGGTGCTTTAGGAGCACACCATTTGTGCTATATCTaGATAAGGGTCTGCAGGGCA | + |
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Preference number: 2 (lower is better) Translates to: FYLIFRIGVRLQGALGAHHLCYI*IRVCRA Trigger: TGCCCTGCAGACCCTTATTCAGATATAGCACAAATG...GTGTGCTCCTAAAGCACCTTGCAATCTGACTCCAATCCTAAAAATCAAATAAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | GTGCACATATACACTGACAGCCATAAAACCAAATGGGTCAAATTCAAACTTAAATGGTGTGGTATGTTGTaGTGTGGTGTGGTATGGTGT | + |
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Preference number: 2 (lower is better) Translates to: VHIYTDSHKTKWVKFKLKWCGML*CGVVWC Trigger: ACACCATACCACACCACAGCACAACATACCACACCA...TTTAAGTTTGAATTTGACCCATTTGGTTTTATGGCTGTCAGTGTATATGTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | TTTTATTTGATTTTTAGGATTGGAGTCAGATTGCAAGGTGCTTTAGGAGCACACCAATTTAACAGGTTTTaGGAATTCTCATTGGGCAGG | + |
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Preference number: 2 (lower is better) Translates to: FYLIFRIGVRLQGALGAHQFNRF*EFSLGR Trigger: CCTGCCCAATGAGAATTCGCAAAACCTGTTAAATTG...GTGTGCTCCTAAAGCACCTTGCAATCTGACTCCAATCCTAAAAATCAAATAAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR-3UTR GCA 90 bp | TCCTCATCTGCTCTTCCATCACTACTTACAAAGCTGTTTCTGATTAGTGTCATTAGTACATTATGTGAGTaGATCCATATGCCATGTATC | + |
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Preference number: 2 (lower is better) Translates to: SSSALPSLLTKLFLISVISTLCE*IHMPCI Trigger: GATACATGGCATATGGATGCACTCACATAATGTACT...AATGACACTAATCAGAAACAGCTTTGTAAGTAGTGATGGAAGAGCAGATGAGGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| 3UTR CAA 90 bp | TATGTGTTTGTTTGTTTGAGGTACATAACCCAGTTAGTTTGCATATaGGAAAGCACTGAGAAAGCTCACCAAAAATACAGCTCTGTACAA | + |
|
Preference number: 2 (lower is better) Translates to: YVFVCLRYITQLVCI*ESTEKAHQKYSSVQ Trigger: TTGTACAGAGCTGTATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTGGGTTATGTACCTCAAACAAACAAACACATA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR-3UTR TCA 90 bp | CTGACAGGACTTGATTATAATCCTGCATTCTATCTCCTGTATGTGTTTGTTTGTCATATTGGAAAGCACTaGGAAAGCTCACCAAAAATA | + |
|
Preference number: 2 (lower is better) Translates to: LTGLDYNPAFYLLYVFVCHIGKH*ESSPKI Trigger: TATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATG...ACAAACAAACACATACAGGAGATAGAATGCAGGATTATAATCAAGTCCTGTCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | GCCAGGTTTAGTGGGAAGAAGTTAGATTGCTGGAGATaGCCTCTTCAAAGACACTGGGACCCCAGGCTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: ARFSGKKLDCWR*PLQRHWDPRLF Trigger: GAAGAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCCACTAAACCTGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR TCA 72 bp | TCGGATCCCATTACAGATAGTTGTGAGCCACCAGGTTaGTGCTGGGATTTGAACTCAGGACCTCCGGAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: SDPITDSCEPPG*CWDLNSGPPEE Trigger: CTCTTCCGGAGGTCCTGAGTTCAAATCCCAGCATCAACCTGGTGGCTCACAACTATCTGTAATGGGATCCGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | GTCAGATTGCAAGGTGCTTTAGGAGCACACAGAGGGTaGATGTGCGCATGTGTGATCTCCCCATGTGTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: VRLQGALGAHRG*MCACVISPCVF Trigger: AAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTGTGCTCCTAAAGCACCTTGCAATCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | CCTTACCACCCCTTCTTGCATGTTAACTACATGGACTaGAGAGGATCGAGGTTGGGTTGGTTCTCAGCATCC | + |
|
Preference number: 3 (lower is better) Translates to: PYHPFLHVNYMD*RGSRLGWFSAS Trigger: GGATGCTGAGAACCAACCCAACCTCGATCCTCTGCAGTCCATGTAGTTAACATGCAAGAAGGGGTGGTAAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR-3UTR CAA 90 bp | GCCAGGTTTAGTGGGAAGAAGTTAGATTGCTGGAGATGCCCTCTTCAAAGACACCCACACTCCTGTATCTaGTGCATTGCCAAGAGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: ARFSGKKLDCWRCPLQRHPHSCI*CIAKRG Trigger: CCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGG...GTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCCACTAAACCTGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR GCA 72 bp | CTTCAAGAAGCCAGGTTTAGTGGGAAGAAGTTAGATTaGTGGAGATGCCCTCTTCAAAGACACTGGGACCCC | + |
|
Preference number: 3 (lower is better) Translates to: LQEARFSGKKLD*WRCPLQRHWDP Trigger: GGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTTCCCACTAAACCTGGCTTCTTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR CCA 72 bp | GAAAACTGTCACCTCCCCAGAGGAATAACTCTCCCATaGTATTGGCCTACAATTCCCTCGGCTACACCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: ENCHLPRGITLP*YWPTIPSATPR Trigger: TCTAGGTGTAGCCGAGGGAATTGTAGGCCAATACCATGGGAGAGTTATTCCTCTGGGGAGGTGACAGTTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR-3UTR CAA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGCATTGGTGTGGTATGTaGTGCTGTGGTGTGGTATGG | + |
|
Preference number: 3 (lower is better) Translates to: HRGCMCACVISPCVFRIKHWCGM*CCGVVW Trigger: CCATACCACACCACAGCACAACATACCACACCAATG...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATGGGGCTACAAAAGCCAAGCACACCTGGCACCTCCAGGAGCTGAAAGAGAATCACCCTTCAATCTaGACAGTACATTATGTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: GDGATKAKHTWHLQELKENHPSI*TVHYVS Trigger: ACTCACATAATGTACTGTCAAGATTGAAGGGTGATT...CTCTTTCAGCTCCTGGAGGTGCCAGGTGTGCTTGGCTTTTGTAGCCCCATCACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR TCA 72 bp | CATTTAACAGTTGGGAAGCAGATCCTCCCCCTAAACTaGTGGGAACAAACACAACCTAATGGGGGCACCAAC | + |
|
Preference number: 3 (lower is better) Translates to: HLTVGKQILPLN*WEQTQPNGGTN Trigger: GTTGGTGCCCCCATTAGGTTGTGTTTGTTCCCATCAGTTTAGGGGGAGGATCTGCTTCCCAACTGTTAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | TTTTGCCTTACCACCCCTTCTTGCATGTTAACTACATaGACTGCAGAGGATCGAGGTTGGGTTGGTTCTCAG | + |
|
Preference number: 3 (lower is better) Translates to: FCLTTPSCMLTT*TAEDRGWVGSQ Trigger: CTGAGAACCAACCCAACCTCGATCCTCTGCAGTCCATGTAGTTAACATGCAAGAAGGGGTGGTAAGGCAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR-3UTR CAA 90 bp | ATGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCGATGCTTTCTTTCTCTaGACAGATCTCACACTATTT | + |
|
Preference number: 3 (lower is better) Translates to: MEGPEGSQRASVDSFLPSDAFFL*TDLTLF Trigger: AAATAGTGTGAGATCTGTCAAGAGAAAGAAAGCATC...GCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTGTTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTATAAAAAGGCAATCTTaGCACCCAGGTGCCATGCTG | + |
|
Preference number: 3 (lower is better) Translates to: KVLGAQLSLDSELRTGHIIKRQS*HPGAML Trigger: CAGCATGGCACCTGGGTGCAAAGATTGCCTTTTTAT...AATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAACACCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | GGCCATTGGTGTGGTATGTTGTGCTGTGGTGTGGTATaGTGTGGTATCGATGTCTTCACATACATCTTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GHWCGMLCCGVV*CGIDVFTYIFQ Trigger: CTGAAAGATGTATGTGAAGACATCGATACCACACCATACCACACCACAGCACAACATACCACACCAATGGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | GTTCTGGCCATTGGTGTGGTATGTTGTGCTGTGGTGTaGTATGGTGTGGTATCGATGTCTTCACATACATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLAIGVVCCAVV*YGVVSMSSHTS Trigger: AGATGTATGTGAAGACATCGATACCACACCATACCACACCACAGCACAACATACCACACCAATGGCCAGAAC 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | CAACACAGTGGTGATTGGTATGTTTTGGTCCAATGTTaGGATATTTGCACAGCCAGAGGGTCCTGTGAACAG | + |
|
Preference number: 3 (lower is better) Translates to: QHSGDWYVLVQC*DICTARGSCEQ Trigger: CTGTTCACAGGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACATACCAATCACCACTGTGTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR TCA 72 bp | GCGAATTCTCATTGGGCAGGTTTCCAGTTGTTGAAATaGGGCTGGGTTCCAAGGGTGATGATTGTATTGATC | + |
|
Preference number: 3 (lower is better) Translates to: ANSHWAGFQLLK*GWVPRVMIVLI Trigger: GATCAATACAATCATCACCCTTGGAACCCAGCCTCATTTCAACAACTGGAAACCTGCCCAATGAGAATTCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTGATTGGTATGTTTTGGTCCAATGTTGGGATATTTGCACAGCCAGAGGGTCCCAGTTAGTTTGCATATaGGAAAGCACTGAGAAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: GDWYVLVQCWDICTARGSQLVCI*ESTEKA Trigger: AGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTG...GGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACATACCAATCACC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | TTGGTGTGGTATGTTGTGCTGTGGTGTGGTATGGTGTaGTATCGATGTCTTCACATACATCTTTCAGACATG | + |
|
Preference number: 3 (lower is better) Translates to: LVWYVVLWCGMV*YRCLHIHLSDM Trigger: CATGTCTGAAAGATGTATGTGAAGACATCGATACCACACCATACCACACCACAGCACAACATACCACACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | TCTTTGCACCCAGGTGCCATGCTGTATGCAGAGTTCTaGCTTAACTTTAGGAAGGGATATTTTACTGAAAAC | + |
|
Preference number: 3 (lower is better) Translates to: SLHPGAMLYAEF*LNFRKGYFTEN Trigger: GTTTTCAGTAAAATATCCCTTCCTAAAGTTAAGCCAGAACTCTGCATACAGCATGGCACCTGGGTGCAAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | GACTCAAAGGCAGATTTGATAGTAACATTTAACAGTTaGGAAGCAGATCCTCCCCCTAAACTGATGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: DSKADLIVTFNS*EADPPPKLMGT Trigger: TGTTCCCATCAGTTTAGGGGGAGGATCTGCTTCCCAACTGTTAAATGTTACTATCAAATCTGCCTTTGAGTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | AGTACATTATGTGAGTGCATCCATATGCCATGTATCTaGAGACTTAGGAAAAAGGGGATGCTAAGGTTCTTC | + |
|
Preference number: 3 (lower is better) Translates to: STLCECIHMPCI*RLRKKGMLRFF Trigger: GAAGAACCTTAGCATCCCCTTTTTCCTAAGTCTGCAGATACATGGCATATGGATGCACTCACATAATGTACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR TCA 72 bp | ATTTCAAATCTACAGTCAGAAGTGAGACCCTTTCTGTaGTTTTCACCTCAACATCAAGACCCACACAATGCT | + |
|
Preference number: 3 (lower is better) Translates to: ISNLQSEVRPFL*FSPQHQDPHNA Trigger: AGCATTGTGTGGGTCTTGATGTTGAGGTGAAAATCACAGAAAGGGTCTCACTTCTGACTGTAGATTTGAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | ACATGTCACAAGCACAAAGTGCCAAAATTTCCAGTTTaGACAATTTCTGTGCACATATACACTGACAGCCAT | + |
|
Preference number: 3 (lower is better) Translates to: TCHKHKVPKFPV*TISVHIYTDSH Trigger: ATGGCTGTCAGTGTATATGTGCACAGAAATTGTGCAAACTGGAAATTTTGGCACTTTGTGCTTGTGACATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | CAATCACCCTTCAATCTTGACAGTACATTATGTGAGTaGATCCATATGCCATGTATCTGCAGACTTAGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: QSPFNLDSTLCE*IHMPCICRLRK Trigger: TTTCCTAAGTCTGCAGATACATGGCATATGGATGCACTCACATAATGTACTGTCAAGATTGAAGGGTGATTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR CCA 72 bp | ACAAAGCTGTTTCTGATTAGTGTCATTTGTTCACCTTaGGTACTGATTAGCCTTGGGTGTCCATCACATAAA | + |
|
Preference number: 3 (lower is better) Translates to: TKLFLISVICSP*VLISLGCPSHK Trigger: TTTATGTGATGGACACCCAAGGCTAATCAGTACCCAAGGTGAACAAATGACACTAATCAGAAACAGCTTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACAGCACAAACACAAGACTCATGAAGAAGGAGAAAACCTACAATTTAACAGGAGGGTGATGATTGTATaGATCTTTCAGGAACTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQHKHKTHEEGENLQFNRRVMIV*IFQELE Trigger: TTCCAGTTCCTGAAAGATCAATACAATCATCACCCT...CCTGTTAAATTGTAGGTTTTCTCCTTCTTCATGAGTCTTGTGTTTGTGCTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR TCA 72 bp | GTACATAACCCAGTTAGTTTGCATATTGGAAAGCACTaGGAAAGCTCACCAAAAATACAGCTCTGTACAAAC | + |
|
Preference number: 3 (lower is better) Translates to: VHNPVSLHIGKH*ESSPKIQLCTN Trigger: GTTTGTACAGAGCTGTATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTGGGTTATGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | CATGAAGAAGGAGAAAACCTACAATTTAACAGGTTTTaGGAATTCTCATTGGGCAGGTTTCCAGTTGTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: HEEGENLQFNRF*EFSLGRFPVVE Trigger: TTCAACAACTGGAAACCTGCCCAATGAGAATTCGCAAAACCTGTTAAATTGTAGGTTTTCTCCTTCTTCATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR GCA 72 bp | ACAAAGTGCCAAAATTTCCAGTTTGCACAATTTCTGTaGACATATACACTGACAGCCATAAAACCAAATGGG | + |
|
Preference number: 3 (lower is better) Translates to: TKCQNFQFAQFL*TYTLTAIKPNG Trigger: CCCATTTGGTTTTATGGCTGTCAGTGTATATGTGCACAGAAATTGTGCAAACTGGAAATTTTGGCACTTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR TCA 72 bp | CAGGAAATCAACATATTTCAAATCTACAGTCAGAAGTaGGACCCTTTCTGTGATTTTCACCTCAACATCAAG | + |
|
Preference number: 3 (lower is better) Translates to: QEINIFQIYSQK*DPFCDFHLNIK Trigger: CTTGATGTTGAGGTGAAAATCACAGAAAGGGTCTCACTTCTGACTGTAGATTTGAAATATGTTGATTTCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CCA 72 bp | TATTGGCCTACAATTCCCTCGGCTACACCTAGATCTTaGGAATCTTGCTTTCAATGTTTACACAATTTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: YWPTIPSATPRS*ESCFQCLHNFY Trigger: ATAAAAATTGTGTAAACATTGAAAGCAAGATTCCCAAGATCTAGGTGTAGCCGAGGGAATTGTAGGCCAATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| 3UTR CAA 72 bp | GCATGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTaGATAGCTTCCTTCCCAGCAGGGGGTGGAAGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AWRVLRAPKELQ*IASFPAGGGSD Trigger: ATCACTTCCACCCCCTGCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCATGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | AGACAGAGCCCACACTCCTGTATCTTGTGCATTGCCAAGAGAGGGAAATTAGGGCGGGCGCCGAGACCTTaGTCTTCACGGGGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPHSCILCIAKRGKLGRAPRP*SSRGHG Trigger: ACCATGACCCCGTGAAGACCAAGGTCTCGGCGCCCG...CCCTAATTTCCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR GCA 90 bp | GGTGATGGGGCTACAAAAGCCAAGCACACCTGGCACCTCCAGGAGCTGAAAGAGAGGCACAGTATTGCCTaGCTGTCTTCTCCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GDGATKAKHTWHLQELKERHSIA*LSSPSP Trigger: TGGTGAAGGAGAAGACAGGCAGGCAATACTGTGCCT...CTCTTTCAGCTCCTGGAGGTGCCAGGTGTGCTTGGCTTTTGTAGCCCCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR GCA 90 bp | TGGAGGGTCCTGAGGGCTCCCAAAGAGCTTCAGTTGATAGCTTCCTTCCCAGCATATAAGAATGCCCAGTaGCCACCAGTCCACAGCCCT | + |
|
Preference number: 4 (lower is better) Translates to: WRVLRAPKELQLIASFPAYKNAQ*PPVHSP Trigger: AGGGCTGTGGACTGGTGGGCACTGGGCATTCTTATA...TGCTGGGAAGGAAGCTATCAACTGAAGCTCTTTGGGAGCCCTCAGGACCCTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGCGGGCGCCGAGACCTTaGTCTTCACGGGGTCATGGT | + |
|
Preference number: 4 (lower is better) Translates to: HRGCMCACVISPCVFRIKRAPRP*SSRGHG Trigger: ACCATGACCCCGTGAAGACCAAGGTCTCGGCGCCCG...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| CDS-3UTR CCA 90 bp | AACTGGGAGACAGAGACAGAGCCCACACTCCTGTATCTTGTGCATTGCCAAGAGTGGGGCGAGATATTCTaGTGTCCCACAGAGAGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: NWETETEPTLLYLVHCQEWGEIF*CPTESP Trigger: TGGACTCTCTGTGGGACACCAGAATATCTCGCCCCA...CTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCTCTGTCTCCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR TCA 90 bp | TGCAGACTTAGGAAAAAGGGGATGCTAAGGTTCTTCATAGGCCGTGTATGCAGCGATTACGCAGGTAGGTaGAGAGCTCACCACCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CRLRKKGMLRFFIGRVCSDYAGR*RAHHQA Trigger: TGCCTGGTGGTGAGCTCTTCACCTACCTGCGTAATC...GCTGCATACACGGCCTATGAAGAACCTTAGCATCCCCTTTTTCCTAAGTCTGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | GGTGATTGGTATGTTTTGGTCCAATGTTGGGATATTTGCACAGCCAGAGGGTCCTCCCAGTGCCCACGGTaGCTATGGTGTCCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: GDWYVLVQCWDICTARGSSQCPR*LWCPNL Trigger: AAGATTGGGACACCATAGCCACCGTGGGCACTGGGA...GGACCCTCTGGCTGTGCAAATATCCCAACATTGGACCAAAACATACCAATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| 3UTR CAA 72 bp | CTGCCTATAAGTCCAGCTGTAGGGTCTCTGGTGCACTaGTTGGCTGTGTGTACTGCAGTCACATGTACACAC | + |
|
Preference number: 4 (lower is better) Translates to: LPISPAVGSLVH*LAVCTAVTCTH Trigger: GTGTGTACATGTGACTGCAGTACACACAGCCAACAAGTGCACCAGAGACCCTACAGCTGGACTTATAGGCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| CDS-3UTR GCA 90 bp | GGTGTATACTTGCCTCCACAGCTACCAGTGACCATCAGGAACAACCAACCTTCCTTCTCATTCTGCACATaGTGTTCCTGTTTCAGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: GVYLPPQLPVTIRNNQPSFSFCT*CSCFRR Trigger: CCGCCTGAAACAGGAACAGCATGTGCAGAATGAGAA...GGAAGGTTGGTTGTTCCTGATGGTCACTGGTAGCTGTGGAGGCAAGTATACACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | TCCACAGCTACCAGTGACCATCAGGAACAACCAACCTTCCCATCAACTGGGAGAAGGAAGCGGTTGTCATaGCCTGTCCAAAGCAGTTTA | + |
|
Preference number: 4 (lower is better) Translates to: STATSDHQEQPTFPSTGRRKRLS*PVQSSL Trigger: TAAACTGCTTTGGACAGGCCATGACAACCGCTTCCT...TCTCCCAGTTGATGGGAAGGTTGGTTGTTCCTGATGGTCACTGGTAGCTGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGACCTCCGGAAGAGCAGTCACTGCTCTTAACCGCTGAGCCATCTCTCCAGGTCCAATTCACTCTCTaGATAAGTCTCAAAGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: SGPPEEQSLLLTAEPSLQVQFTL*ISLKVG Trigger: TCCAACTTTGAGACTTATCCAGAGAGTGAATTGGAC...CTGGAGAGATGGCTCAGCGGTTAAGAGCAGTGACTGCTCTTCCGGAGGTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| CDS-3UTR TCA 90 bp | AGACAGAGCCCACACTCCTGTATCTTGTGCATTGCCAAGAGAGGGAAATTAGGGGACCTTTGCTCTGAATaGCTTCTGGGGCGAGATATT | + |
|
Preference number: 4 (lower is better) Translates to: RQSPHSCILCIAKRGKLGDLCSE*LLGRDI Trigger: AATATCTCGCCCCAGAAGTCATTCAGAGCAAAGGTC...CCCTAATTTCCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR GCA 90 bp | TTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTTCCCTCAGGCACAGTATTGCCTaGCTGTCTTCTCCTTCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LGAQLSLDSELRTGHISLRHSIA*LSSPSP Trigger: TGGTGAAGGAGAAGACAGGCAGGCAATACTGTGCCT...GAGGGAAATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
||
| CDS-3UTR CCA 90 bp | ATTTGTTCACCTTGGGTACTGATTAGCCTTGGGTGTCCATCACATAAAGAAGATTCCCAGTGCCCACGGTaGCTATGGTGTCCCAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ICSPWVLISLGCPSHKEDSQCPR*LWCPNL Trigger: AAGATTGGGACACCATAGCCACCGTGGGCACTGGGA...ATCTTCTTTATGTGATGGACACCCAAGGCTAATCAGTACCCAAGGTGAACAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
||
| CDS-3UTR CCA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGCAGGCGGATGACATCTaGGATACTCATAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: HRGCMCACVISPCVFRIKQADDI*DTHNLQ Trigger: TTGAAGATTATGAGTATCCCAGATGTCATCCGCCTG...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CCA 90 bp | AAGAAGTTAGATTGCTGGAGATGCCCTCTTCAAAGACACTGGGACCCCAGGCTCTTAATGAGGAAGGGATaGTTTATTTCCTTCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: KKLDCWRCPLQRHWDPRLLMRKG*FISFRT Trigger: AGTCCTGAAGGAAATAAACCATCCCTTCCTCATTAA...GAGCCTGGGGTCCCAGTGTCTTTGAAGAGGGCATCTCCAGCAATCTAACTTCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| CDS-3UTR CCA 90 bp | AGGGGTGGATCCTTAAAGTTCCCTTGTGGGGATGTGGGTACATTTGTATTATCAAGGAAGCGGTTGTCATaGCCTGTCCAAAGCAGTTTA | + |
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Preference number: 4 (lower is better) Translates to: RGGSLKFPCGDVGTFVLSRKRLS*PVQSSL Trigger: TAAACTGCTTTGGACAGGCCATGACAACCGCTTCCT...TGATAATACAAATGTACCCACATCCCCACAAGGGAACTTTAAGGATCCACCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CCA 90 bp | AAGGTGTTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTGTTGTCATCGAAAAATaGGGGAAACCCAGACAGCAT | + |
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Preference number: 4 (lower is better) Translates to: KVLGAQLSLDSELRTGHIVVIEK*GKPRQH Trigger: ATGCTGTCTGGGTTTCCCCCATTTTTCGATGACAAC...AATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAACACCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR TCA 90 bp | GTGCACATATACACTGACAGCCATAAAACCAAATGGGTCAAATTCAAACTTAAAGATTACGCAGGTAGGTaGAGAGCTCACCACCAGGCA | + |
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Preference number: 4 (lower is better) Translates to: VHIYTDSHKTKWVKFKLKDYAGR*RAHHQA Trigger: TGCCTGGTGGTGAGCTCTTCACCTACCTGCGTAATC...TTTAAGTTTGAATTTGACCCATTTGGTTTTATGGCTGTCAGTGTATATGTGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CCA 90 bp | CTGACAGGACTTGATTATAATCCTGCATTCTATCTCCTGTATGTGTTTGTTTGTTGGGGCGAGATATTCTaGTGTCCCACAGAGAGTCCA | + |
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Preference number: 4 (lower is better) Translates to: LTGLDYNPAFYLLYVFVCWGEIF*CPTESP Trigger: TGGACTCTCTGTGGGACACCAGAATATCTCGCCCCA...ACAAACAAACACATACAGGAGATAGAATGCAGGATTATAATCAAGTCCTGTCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CCA 90 bp | GGGATGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTTGCACCCAGGTGCGATAAGTCTCAAAGTTaGAGATGTCACCATCACCCG | + |
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Preference number: 4 (lower is better) Translates to: GMWVHLYYHKKAIFAPRCDKSQS*RCHHHP Trigger: CGGGTGATGGTGACATCTCCAACTTTGAGACTTATC...GCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACATCCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 72 bp | TGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTaGCACCCAGGTGCCATGCTGTATGCAGAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: CGYICIIIKRQS*HPGAMLYAEFW Trigger: CCAGAACTCTGCATACAGCATGGCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR GCA 90 bp | GTGCACATATACACTGACAGCCATAAAACCAAATGGGTCAAATTCAAACTTAAATATAAGAATGCCCAGTaGCCACCAGTCCACAGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VHIYTDSHKTKWVKFKLKYKNAQ*PPVHSP Trigger: AGGGCTGTGGACTGGTGGGCACTGGGCATTCTTATA...TTTAAGTTTGAATTTGACCCATTTGGTTTTATGGCTGTCAGTGTATATGTGCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR GCA 90 bp | CTGACAGGACTTGATTATAATCCTGCATTCTATCTCCTGTATGTGTTTGTTTGTCCGCTTGATGTCTTCTaGCCCATTCTTCATGTTGCC | + |
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Preference number: 4 (lower is better) Translates to: LTGLDYNPAFYLLYVFVCPLDVF*PILHVA Trigger: GGCAACATGAAGAATGGGGCAGAAGACATCAAGCGG...ACAAACAAACACATACAGGAGATAGAATGCAGGATTATAATCAAGTCCTGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 72 bp | GAAAACCTACAATTTAACAGGTTTTGCGAATTCTCATaGGGCAGGTTTCCAGTTGTTGAAATGAGGCTGGGT | + |
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Preference number: 4 (lower is better) Translates to: ENLQFNRFCEFS*GRFPVVEMRLG Trigger: ACCCAGCCTCATTTCAACAACTGGAAACCTGCCCAATGAGAATTCGCAAAACCTGTTAAATTGTAGGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR TCA 90 bp | CTGACAGGACTTGATTATAATCCTGCATTCTATCTCCTGTATGTGTTTGTTTGTGACCTTTGCTCTGAATaGCTTCTGGGGCGAGATATT | + |
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Preference number: 4 (lower is better) Translates to: LTGLDYNPAFYLLYVFVCDLCSE*LLGRDI Trigger: AATATCTCGCCCCAGAAGTCATTCAGAGCAAAGGTC...ACAAACAAACACATACAGGAGATAGAATGCAGGATTATAATCAAGTCCTGTCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR GCA 90 bp | GGGATGTGGGTACATTTGTATTATCATAAAAAGGCAATCTTTGCACCCAGGTGCTATTTCCTTCAGGACTaGTTTCTCATTCTGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GMWVHLYYHKKAIFAPRCYFLQD*FLILHM Trigger: CATGTGCAGAATGAGAAAGCAGTCCTGAAGGAAATA...GCACCTGGGTGCAAAGATTGCCTTTTTATGATAATACAAATGTACCCACATCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR GCA 90 bp | GTGCACATATACACTGACAGCCATAAAACCAAATGGGTCAAATTCAAACTTAAATTCTCATTCTGCACATaGTGTTCCTGTTTCAGGCGG | + |
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Preference number: 4 (lower is better) Translates to: VHIYTDSHKTKWVKFKLKFSFCT*CSCFRR Trigger: CCGCCTGAAACAGGAACAGCATGTGCAGAATGAGAA...TTTAAGTTTGAATTTGACCCATTTGGTTTTATGGCTGTCAGTGTATATGTGCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 72 bp | CTTTCAATGTTTACACAATTTTTATCAGGTGTATACTaGCCTCCACAGCTACCAGTGACCATCAGGAACAAC | + |
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Preference number: 4 (lower is better) Translates to: LSMFTQFLSGVY*PPQLPVTIRNN Trigger: GTTGTTCCTGATGGTCACTGGTAGCTGTGGAGGCAAGTATACACCTGATAAAAATTGTGTAAACATTGAAAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| CDS-3UTR CCA 90 bp | TCACAGCACAAACACAAGACTCATGAAGAAGGAGAAAACCTACAATTTAACAGGATAACTTGGGCACAATaGGTGGCTTCAGTTTTCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SQHKHKTHEEGENLQFNRITWAQ*VASVFF Trigger: AAAGAAAACTGAAGCCACCCATTGTGCCCAAGTTAT...CCTGTTAAATTGTAGGTTTTCTCCTTCTTCATGAGTCTTGTGTTTGTGCTGTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 72 bp | GTTTGTTTGAGGTACATAACCCAGTTAGTTTGCATATaGGAAAGCACTGAGAAAGCTCACCAAAAATACAGC | + |
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Preference number: 4 (lower is better) Translates to: VCLRYITQLVCI*ESTEKAHQKYS Trigger: GCTGTATTTTTGGTGAGCTTTCTCAGTGCTTTCCAATATGCAAACTAACTGGGTTATGTACCTCAAACAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| 3UTR CAA 72 bp | AATTTATTAACTATTCCATTGTTTCATGAGAAGGTGTaGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGA | + |
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Preference number: 4 (lower is better) Translates to: NLLTIPLFHEKV*GAQLSLDSELR Trigger: TCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAACACCTTCTCATGAAACAATGGAATAGTTAATAAATT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CCA 90 bp | TTTTATTTGATTTTTAGGATTGGAGTCAGATTGCAAGGTGCTTTAGGAGCACACTTAATGAGGAAGGGATaGTTTATTTCCTTCAGGACT | + |
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Preference number: 4 (lower is better) Translates to: FYLIFRIGVRLQGALGAHLMRKG*FISFRT Trigger: AGTCCTGAAGGAAATAAACCATCCCTTCCTCATTAA...GTGTGCTCCTAAAGCACCTTGCAATCTGACTCCAATCCTAAAAATCAAATAAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS GCA 90 bp | GTCCCAGTGCCCACGGTGGCTATGGTGTCCCAATCTTGTAACGAGTaGCCCGCCTTCTGTGACGATGTCCTGGGTTTGGGGTCCGCGGCG | + |
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Preference number: 5 (lower is better) Translates to: VPVPTVAMVSQSCNE*PAFCDDVLGLGSAA Trigger: CGCCGCGGACCCCAAACCCAGGACATCGTCACAGAAGGCGGGGCACTCGTTACAAGATTGGGACACCATAGCCACCGTGGGCACTGGGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS-3UTR CAA 90 bp | TCAGGACCTCCGGAAGAGCAGTCACTGCTCTTAACCGCTGAGCCATCTCTCCAGGCCCCATTCTTCATGTaGCCTAGGCGTCGGGTCCTG | + |
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Preference number: 5 (lower is better) Translates to: SGPPEEQSLLLTAEPSLQAPFFM*PRRRVL Trigger: CAGGACCCGACGCCTAGGCAACATGAAGAATGGGGC...CTGGAGAGATGGCTCAGCGGTTAAGAGCAGTGACTGCTCTTCCGGAGGTCCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CCA 90 bp | TCACCAGGTTTACACGGCCAAAGGTCCCAGTGCCCACGGTGGCTATaGTGTCCCAATCTTGTAACGAGTGCCCCGCCTTCTGTGACGATG | + |
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Preference number: 5 (lower is better) Translates to: SPGLHGQRSQCPRWL*CPNLVTSAPPSVTM Trigger: CATCGTCACAGAAGGCGGGGCACTCGTTACAAGATTGGGACACCATAGCCACCGTGGGCACTGGGACCTTTGGCCGTGTAAACCTGGTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS-3UTR CAA 90 bp | GGTGATGGGGCTACAAAAGCCAAGCACACCTGGCACCTCCAGGAGCTGAAAGAGCTTCAAGGCACAGTATaGCCTGCCTGTCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GDGATKAKHTWHLQELKELQGTV*PACLLL Trigger: AAGGAGAAGACAGGCAGGCAATACTGTGCCTTGAAG...CTCTTTCAGCTCCTGGAGGTGCCAGGTGTGCTTGGCTTTTGTAGCCCCATCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| CDS-3UTR CAA 90 bp | AGACAGAGCCCACACTCCTGTATCTTGTGCATTGCCAAGAGAGGGAAATTAGGGATGTATAGGAAGCGGTaGTCATGGCCTGTCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: RQSPHSCILCIAKRGKLGMYRKR*SWPVQS Trigger: GCTTTGGACAGGCCATGACAACCGCTTCCTATACAT...CCCTAATTTCCCTCTCTTGGCAATGCACAAGATACAGGAGTGTGGGCTCTGTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000114044.2 |
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| CDS-3UTR CAA 90 bp | AAGGTGTTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTCCATCACCCGATAACTaGGGCACAATGGGTGGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KVLGAQLSLDSELRTGHIPSPDN*GTMGGF Trigger: GAAGCCACCCATTGTGCCCAAGTTATCGGGTGATGG...AATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAACACCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CAA 90 bp | CACAGAGGGTGCATGTGCGCATGTGTGATCTCCCCATGTGTGTTTAGAATTAAGATGTATAGGAAGCGGTaGTCATGGCCTGTCCAAAGC | + |
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Preference number: 5 (lower is better) Translates to: HRGCMCACVISPCVFRIKMYRKR*SWPVQS Trigger: GCTTTGGACAGGCCATGACAACCGCTTCCTATACAT...CTTAATTCTAAACACACATGGGGAGATCACACATGCGCACATGCACCCTCTGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CCA 90 bp | CCACCAGGCACGAACTCCATCAACATGTATAGGAAGCGGTTGTCATaGCCTGTCCAAAGCAGTTTAATGAGGAAGGGATGGTTTATTTCC | + |
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Preference number: 5 (lower is better) Translates to: PPGTNSINMYRKRLS*PVQSSLMRKGWFIS Trigger: GGAAATAAACCATCCCTTCCTCATTAAACTGCTTTGGACAGGCCATGACAACCGCTTCCTATACATGTTGATGGAGTTCGTGCCTGGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS-3UTR CAA 90 bp | AGGGGTGGATCCTTAAAGTTCCCTTGTGGGGATGTGGGTACATTTGTATTATCACTTCAAGGCACAGTATaGCCTGCCTGTCTTCTCCTT | + |
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Preference number: 5 (lower is better) Translates to: RGGSLKFPCGDVGTFVLSLQGTV*PACLLL Trigger: AAGGAGAAGACAGGCAGGCAATACTGTGCCTTGAAG...TGATAATACAAATGTACCCACATCCCCACAAGGGAACTTTAAGGATCCACCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CAA 90 bp | TTGGGTGCACAACTCTCCCTGGACTCAGAGTTAAGAACAGGACATATTTCCCTCAATGTTTCCAGGTCTTaGTCAGATACAGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGAQLSLDSELRTGHISLNVSRS*SDTEGV Trigger: GACACCTTCTGTATCTGACAAAGACCTGGAAACATT...GAGGGAAATATGTCCTGTTCTTAACTCTGAGTCCAGGGAGAGTTGTGCACCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS-3UTR CAA 90 bp | CTGACAGGACTTGATTATAATCCTGCATTCTATCTCCTGTATGTGTTTGTTTGTACCACCAGCAGCTTCTaGATGAGGTCCTTAGAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: LTGLDYNPAFYLLYVFVCTTSSF*MRSLEV Trigger: CACCTCTAAGGACCTCATCAAGAAGCTGCTGGTGGT...ACAAACAAACACATACAGGAGATAGAATGCAGGATTATAATCAAGTCCTGTCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CAA 72 bp | CGGTGCCGCTTGATGTCTTCTGCCCCATTCTTCATGTaGCCTAGGCGTCGGGTCCTGTCCACCACCAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: RCRLMSSAPFFM*PRRRVLSTTSS Trigger: GCTGCTGGTGGTGGACAGGACCCGACGCCTAGGCAACATGAAGAATGGGGCAGAAGACATCAAGCGGCACCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CAA 90 bp | CGGAACCACCGGTGCCGCTTGATGTCTTCTGCCCCATTCTTCATGTaGCCTAGGCGTCGGGTCCTGTCCACCACCAGCAGCTTCTTGATG | + |
|
Preference number: 6 (lower is better) Translates to: RNHRCRLMSSAPFFM*PRRRVLSTTSSFLM Trigger: CATCAAGAAGCTGCTGGTGGTGGACAGGACCCGACGCCTAGGCAACATGAAGAATGGGGCAGAAGACATCAAGCGGCACCGGTGGTTCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CCA 72 bp | TTACACGGCCAAAGGTCCCAGTGCCCACGGTGGCTATaGTGTCCCAATCTTGTAACGAGTGCCCCGCCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LHGQRSQCPRWL*CPNLVTSAPPS Trigger: AGAAGGCGGGGCACTCGTTACAAGATTGGGACACCATAGCCACCGTGGGCACTGGGACCTTTGGCCGTGTAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS TCA 72 bp | ATTCCCACTCCACACCTCGGAACCACCGGTGCCGCTTaGTGTCTTCTGCCCCATTCTTCATGTTGCCTAGGC | + |
|
Preference number: 6 (lower is better) Translates to: IPTPHLGTTGAA*CLLPHSSCCLG Trigger: GCCTAGGCAACATGAAGAATGGGGCAGAAGACATCAAGCGGCACCGGTGGTTCCGAGGTGTGGAGTGGGAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CAA 72 bp | GATTCCCACTCCACACCTCGGAACCACCGGTGCCGCTaGATGTCTTCTGCCCCATTCTTCATGTTGCCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: DSHSTPRNHRCR*MSSAPFFMLPR Trigger: CCTAGGCAACATGAAGAATGGGGCAGAAGACATCAAGCGGCACCGGTGGTTCCGAGGTGTGGAGTGGGAATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS TCA 72 bp | CAACTGAGGAGAATCGGCCACGATTACGCAGGTAGGTaGAGAGCTCACCACCAGGCACGAACTCCATCAACA | + |
|
Preference number: 6 (lower is better) Translates to: QLRRIGHDYAGR*RAHHQARTPST Trigger: TGTTGATGGAGTTCGTGCCTGGTGGTGAGCTCTTCACCTACCTGCGTAATCGTGGCCGATTCTCCTCAGTTG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS CAA 72 bp | CCTAGGCGTCGGGTCCTGTCCACCACCAGCAGCTTCTaGATGAGGTCCTTAGAGGTGAAATCCAATTGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRRRVLSTTSSF*MRSLEVKSNCL Trigger: CAGACAATTGGATTTCACCTCTAAGGACCTCATCAAGAAGCTGCTGGTGGTGGACAGGACCCGACGCCTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CAA 90 bp | AGCTCACCACCAGGCACGAACTCCATCAACATGTATAGGAAGCGGTaGTCATGGCCTGTCCAAAGCAGTTTAATGAGGAAGGGATGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: SSPPGTNSINMYRKR*SWPVQSSLMRKGWF Trigger: AAACCATCCCTTCCTCATTAAACTGCTTTGGACAGGCCATGACAACCGCTTCCTATACATGTTGATGGAGTTCGTGCCTGGTGGTGAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS CAA 72 bp | CCAGGCACGAACTCCATCAACATGTATAGGAAGCGGTaGTCATGGCCTGTCCAAAGCAGTTTAATGAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PGTNSINMYRKR*SWPVQSSLMRK Trigger: CTTCCTCATTAAACTGCTTTGGACAGGCCATGACAACCGCTTCCTATACATGTTGATGGAGTTCGTGCCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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| CDS CCA 72 bp | TCTTGTCCAATTCACTCTCTGGATAAGTCTCAAAGTTaGAGATGTCACCATCACCCGATAACTTGGGCACAA | + |
|
Preference number: 6 (lower is better) Translates to: SCPIHSLDKSQS*RCHHHPITWAQ Trigger: TTGTGCCCAAGTTATCGGGTGATGGTGACATCTCCAACTTTGAGACTTATCCAGAGAGTGAATTGGACAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CCA 72 bp | GTCAGATACAGAAGGTGTCTTGTCCAATTCACTCTCTaGATAAGTCTCAAAGTTGGAGATGTCACCATCACC | + |
|
Preference number: 6 (lower is better) Translates to: VRYRRCLVQFTL*ISLKVGDVTIT Trigger: GGTGATGGTGACATCTCCAACTTTGAGACTTATCCAGAGAGTGAATTGGACAAGACACCTTCTGTATCTGAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036333.14 |
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| CDS CCA 72 bp | CCCTGTATACGATTTCCTTTGAGTGTAGATATTCTATaGCACACACAATCTCTGTGGCGTAGAAGACTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PCIRFPLSVDIL*HTQSLWRRRLK Trigger: CTTCAGTCTTCTACGCCACAGAGATTGTGTGTGCCATAGAATATCTACACTCAAAGGAAATCGTATACAGGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036333.14 ENSMUST00000114044.2 |
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