Pregenerated sensors for PRKRIP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039737Ensembl transcript IDs: ENSMUST00000123921.8, ENSMUST00000149151.2, ENSMUST00000151786.8
Found 146 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGACACTCCAGACCCCCAAACTAGAAACTGCCTGCCGCCCCACTaGCACGATGGCTCTGAGGACCAAGGCAGTCCTGGGTCACCTTTC | + |
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Preference number: 1 (lower is better) Translates to: GDTPDPQTRNCLPPH*HDGSEDQGSPGSPF Trigger: GAAAGGTGACCCAGGACTGCCTTGGTCCTCAGAGCCATCGTGTCAGTGGGGCGGCAGGCAGTTTCTAGTTTGGGGGTCTGGAGTGTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR GCA 90 bp | AGAGCAGGGCAGGATACAGAATGCAATCTGCAAATGTCTAAGGTCTaGTCCCTCTGCTCCCCAGGCAGGCAGGGCTGCAGGAGGTGCCTG | + |
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Preference number: 1 (lower is better) Translates to: RAGQDTECNLQMSKV*SLCSPGRQGCRRCL Trigger: CAGGCACCTCCTGCAGCCCTGCCTGCCTGGGGAGCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTGCCCTGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | CATTTGCCGCTTTTCTTATACAGCCCAGGCCCACCTGCCTGGGGATaGCACTGCCCACAGTGGACTAGGCCCTCCCATATGAGTCAAGAG | + |
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Preference number: 1 (lower is better) Translates to: HLPLFLYSPGPPAWG*HCPQWTRPSHMSQE Trigger: CTCTTGACTCATATGGGAGGGCCTAGTCCACTGTGGGCAGTGTCATCCCCAGGCAGGTGGGCCTGGGCTGTATAAGAAAAGCGGCAAATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR GCA 90 bp | GGCTTTGGCCAGTATCAGTGTCCGCCTCCCACTCTGGGACACTCCTaGTTTCTTTCATCACTTGCATTTCCCTGGGACCGCTCTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GFGQYQCPPPTLGHS*FLSSLAFPWDRSPS Trigger: AGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACACTGATACTGGCCAAAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR GCA 90 bp | TCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTGTGGGTGTTaGTTGCCCTCTGGGCCACTACACACAGCAGGCTTGAACCAGTCA | + |
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Preference number: 1 (lower is better) Translates to: SSPWHDAWSSVFCGC*LPSGPLHTAGLNQS Trigger: TGACTGGTTCAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | CTTTCATCACTTGCATTTCCCTGGGACCGCTCTCCTTCTGCCTGCTaGAGGCCCCATTGGCTCATACTCGTTTTGAGAACGGTTGGGTGG | + |
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Preference number: 1 (lower is better) Translates to: LSSLAFPWDRSPSAC*RPHWLILVLRTVGW Trigger: CCACCCAACCGTTCTCAAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CCA 90 bp | AGCAGGCCATGCCAAAAACAAGGCATCAAAGAGGAGGAGGGTCTGTaGGAGAAAGGCTCAGTGGGGGAGGGTAAGAGAATGGGCGTAAAC | + |
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Preference number: 1 (lower is better) Translates to: SRPCQKQGIKEEEGL*EKGSVGEGKRMGVN Trigger: GTTTACGCCCATTCTCTTACCCTCCCCCACTGAGCCTTTCTCCCACAGACCCTCCTCCTCTTTGATGCCTTGTTTTTGGCATGGCCTGCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | AACACAGCCAGTCTAGCAGCTGGTCACACACAGCCATTTCTCTTCTaGGGCTGGTCACAGAATGAGCTGGGCTCACGACTGCTGAAACTC | + |
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Preference number: 1 (lower is better) Translates to: NTASLAAGHTQPFLF*GWSQNELGSRLLKL Trigger: GAGTTTCAGCAGTCGTGAGCCCAGCTCATTCTGTGACCAGCCTCAGAAGAGAAATGGCTGTGTGTGACCAGCTGCTAGACTGGCTGTGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | GTAAATGGCAGGGCTGTGTACCTCAAGTGCAAGCCTTTCCCAGAGTaGAGCACAACAGGACCTGCCACATTTCAAGGCCCAGTGTCTGTC | + |
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Preference number: 1 (lower is better) Translates to: VNGRAVYLKCKPFPE*STTGPATFQGPVSV Trigger: GACAGACACTGGGCCTTGAAATGTGGCAGGTCCTGTTGTGCTTCACTCTGGGAAAGGCTTGCACTTGAGGTACACAGCCCTGCCATTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | GCTCTCCTTCTGCCTGCTGAAGGCCCCATTGGCTCATACTCGTTTTaGGAACGGTTGGGTGGGCACAAATCTGCAGCTCTGAATTCTCCT | + |
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Preference number: 1 (lower is better) Translates to: ALLLPAEGPIGSYSF*ERLGGHKSAALNSP Trigger: AGGAGAATTCAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR GCA 90 bp | CCACTACACACAGCAGGCTTGAACCAGTCACTCAAGGACACTAAGTaGAAGACTGGCTGCCTCCAAATCCTGGTGACAGGAGGACTTTCC | + |
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Preference number: 1 (lower is better) Translates to: PLHTAGLNQSLKDTK*KTGCLQILVTGGLS Trigger: GGAAAGTCCTCCTGTCACCAGGATTTGGAGGCAGCCAGTCTTGCACTTAGTGTCCTTGAGTGACTGGTTCAAGCCTGCTGTGTGTAGTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CCA 90 bp | GGAGTTGGCCTTAAAGAGAGGATATGGGGCAGGCTTAGGGGCTCATaGACACAGGGTCCTTGCTGTTTCCTGTTTGCACCAGAGTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: GVGLKERIWGRLRGS*TQGPCCFLFAPEFL Trigger: TAGGAACTCTGGTGCAAACAGGAAACAGCAAGGACCCTGTGTCCATGAGCCCCTAAGCCTGCCCCATATCCTCTCTTTAAGGCCAACTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | CCATCAAGGGAAGGCAGGCAGGCACTGAAGCAGAGACCTTGGAAGTaGCACTGCAAACTGGCTCATTTGCCGCTTTTCTTATACAGCCCA | + |
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Preference number: 1 (lower is better) Translates to: PSREGRQALKQRPWK*HCKLAHLPLFLYSP Trigger: TGGGCTGTATAAGAAAAGCGGCAAATGAGCCAGTTTGCAGTGTCACTTCCAAGGTCTCTGCTTCAGTGCCTGCCTGCCTTCCCTTGATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR GCA 90 bp | CTGCTTTCTTTCATCACTTGCATTTCCCTGGGACCGCTCTCCTTCTaGCTGCTGAAGGCCCCATTGGCTCATACTCGTTTTGAGAACGGT | + |
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Preference number: 1 (lower is better) Translates to: LLSFITCISLGPLSF*LLKAPLAHTRFENG Trigger: ACCGTTCTCAAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAAAGAAAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CCA 90 bp | TTGAGAACGGTTGGGTGGGCACAAATCTGCAGCTCTGAATTCTCCTaGTCCGTAAATGGCAGGGCTGTGTACCTCAAGTGCAAGCCTTTC | + |
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Preference number: 1 (lower is better) Translates to: LRTVGWAQICSSEFS*SVNGRAVYLKCKPF Trigger: GAAAGGCTTGCACTTGAGGTACACAGCCCTGCCATTTACGGACCAGGAGAATTCAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | CATACTCGTTTTGAGAACGGTTGGGTGGGCACAAATCTGCAGCTCTaGATTCTCCTGGTCCGTAAATGGCAGGGCTGTGTACCTCAAGTG | + |
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Preference number: 1 (lower is better) Translates to: HTRFENGWVGTNLQL*ILLVRKWQGCVPQV Trigger: CACTTGAGGTACACAGCCCTGCCATTTACGGACCAGGAGAATTCAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAAAACGAGTATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | AGGGTCCTTGCTGTTTCCTGTTTGCACCAGAGTTCCTATGCTGGCTaGAGCAGCAGACAGATGTTTAGTACACAGGATGGAACCACACCC | + |
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Preference number: 1 (lower is better) Translates to: RVLAVSCLHQSSYAG*SSRQMFSTQDGTTP Trigger: GGGTGTGGTTCCATCCTGTGTACTAAACATCTGTCTGCTGCTTCAGCCAGCATAGGAACTCTGGTGCAAACAGGAAACAGCAAGGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | TATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTaGAGCAGAGACCTTGGAAGTGACACTGCAAACTGGCTCATTTGC | + |
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Preference number: 1 (lower is better) Translates to: YLACSLVHQGKAGRH*SRDLGSDTANWLIC Trigger: GCAAATGAGCCAGTTTGCAGTGTCACTTCCAAGGTCTCTGCTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR TCA 90 bp | CACTCAAGGACACTAAGTGCAAGACTGGCTGCCTCCAAATCCTGGTaGCAGGAGGACTTTCCACACCTAAGAGTTCCACTCTTTCCAGTT | + |
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Preference number: 1 (lower is better) Translates to: HSRTLSARLAASKSW*QEDFPHLRVPLFPV Trigger: AACTGGAAAGAGTGGAACTCTTAGGTGTGGAAAGTCCTCCTGTCACCAGGATTTGGAGGCAGCCAGTCTTGCACTTAGTGTCCTTGAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CCA 90 bp | AGCTCCCCAGGACAGCACACCTATGACAGTCTTAGTCACAATGGTTaGTTCAACCCCAGCACCACTATCTGTAACAAGAGAAACCTTATT | + |
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Preference number: 1 (lower is better) Translates to: SSPGQHTYDSLSHNG*FNPSTTICNKRNLI Trigger: AATAAGGTTTCTCTTGTTACAGATAGTGGTGCTGGGGTTGAACCAACCATTGTGACTAAGACTGTCATAGGTGTGCTGTCCTGGGGAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CAA 90 bp | GGATGCAGTTCTGGGCCGGGCACACCGGCAGAGGCAGGGAGGGGCTaGTCCGGAGCTCTGAGGCAGCAGAGGATAATGTTTCAGGCCCAG | + |
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Preference number: 2 (lower is better) Translates to: GCSSGPGTPAEAGRG*SGALRQQRIMFQAQ Trigger: CTGGGCCTGAAACATTATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTGCCCGGCCCAGAACTGCATCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | AGGCAGGCAGACCGGGCTGTGCTGTGGCCACTGAGCTGTGGAGTTAGAGCTGCACAGGCCCAGCCTTGCTaGTTAGCAGCCCCATCCAAC | + |
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Preference number: 2 (lower is better) Translates to: RQADRAVLWPLSCGVRAAQAQPC*LAAPSN Trigger: GTTGGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTG...TGCAGCTCTAACTCCACAGCTCAGTGGCCACAGCACAGCCCGGTCTGCCTGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | CCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATAATGAAGCCTTTCCCAGAGTaGAGCACAACAGGACCTGCC | + |
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Preference number: 2 (lower is better) Translates to: PAEAGRGLSGALRQQRIMKPFPE*STTGPA Trigger: GGCAGGTCCTGTTGTGCTTCACTCTGGGAAAGGCTT...CATTATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | CACACCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATAGCCAGTCTAGCAGCTaGTCACACACAGCCATTTCT | + |
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Preference number: 2 (lower is better) Translates to: HTGRGREGLVRSSEAAEDSQSSS*SHTAIS Trigger: AGAAATGGCTGTGTGTGACCAGCTGCTAGACTGGCT...ATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | TGTCCGCCTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTGCATTTCCCGGCACCCGGGGAAGGTaGAGCACTCACTCCCCTTCA | + |
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Preference number: 2 (lower is better) Translates to: CPPPTLGHSCFLSSLAFPGTRGR*STHSPS Trigger: TGAAGGGGAGTGAGTGCTTCACCTTCCCCGGGTGCC...GGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGCCAGGCAGGCAGGGCTaGAGGAGGTGCCTGCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKPGRQG*RRCLPS Trigger: AGAAGGCAGGCACCTCCTGCAGCCCTGCCTGCCTGG...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CAA 90 bp | GTCCGGAGCTCTGAGGCAGCAGAGGATAATGTTTCAGGCCCAGCCTaGCTGCTTAGCAGCCCCATCCAACAGGAACAAAAGCCCATGAGG | + |
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Preference number: 2 (lower is better) Translates to: VRSSEAAEDNVSGPA*LLSSPIQQEQKPMR Trigger: CCTCATGGGCTTTTGTTCCTGTTGGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTGAAACATTATCCTCTGCTGCCTCAGAGCTCCGGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCGCCTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTGCATTTCCCGGACCGCTCTCCTTCTaGCTGCTGAAGGCCCCATTG | + |
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Preference number: 2 (lower is better) Translates to: CPPPTLGHSCFLSSLAFPGPLSF*LLKAPL Trigger: CAATGGGGCCTTCAGCAGGCAGAAGGAGAGCGGTCC...GGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGGCAGACCGGGCTGTGCTGTGGCCACTGAGCTGTGGAGTTAGAGCTGCACTTAGTCACAATGGTTaGTTCAACCCCAGCACCACT | + |
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Preference number: 2 (lower is better) Translates to: RQADRAVLWPLSCGVRAALSHNG*FNPSTT Trigger: AGTGGTGCTGGGGTTGAACCAACCATTGTGACTAAG...TGCAGCTCTAACTCCACAGCTCAGTGGCCACAGCACAGCCCGGTCTGCCTGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CAA 90 bp | CCTAAGAGTTCCACTCTTTCCAGTTCCTCTCCCCTGTCTAAGGCTTaGGCCAGTATCAGTGTCCGCCTCCCACTCTGGGACACTCCTGCT | + |
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Preference number: 2 (lower is better) Translates to: PKSSTLSSSSPLSKA*ASISVRLPLWDTPA Trigger: AGCAGGAGTGTCCCAGAGTGGGAGGCGGACACTGATACTGGCCAAAGCCTTAGACAGGGGAGAGGAACTGGAAAGAGTGGAACTCTTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR CAA 90 bp | TTCTGTGGGTGTTGCTTGCCCTCTGGGCCACTACACACAGCAGGCTaGAACCAGTCACTCAAGGACACTAAGTGCAAGACTGGCTGCCTC | + |
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Preference number: 2 (lower is better) Translates to: FCGCCLPSGPLHTAG*NQSLKDTKCKTGCL Trigger: GAGGCAGCCAGTCTTGCACTTAGTGTCCTTGAGTGACTGGTTCAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGCTGACACGATGGCTCTaGGGACCAAGGCAGTCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKLTRWL*GPRQSW Trigger: CCAGGACTGCCTTGGTCCTCAGAGCCATCGTGTCAG...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTCAGGGACCATGGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGAGTCAGGCTGGTCACAGAATaGGCTGGGCTCACGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: MAQGPWNLCYGRKRRGGVRLVTE*AGLTTA Trigger: AGCAGTCGTGAGCCCAGCTCATTCTGTGACCAGCCT...GACTCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | TCACTGCTGTTCAAGCAGAAGGGAACGGCACCCGGGGAAGGTGAAGCACTCACTCAGCCATTTCTCTTCTaGGGCTGGTCACAGAATGAG | + |
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Preference number: 2 (lower is better) Translates to: SLLFKQKGTAPGEGEALTQPFLF*GWSQNE Trigger: CTCATTCTGTGACCAGCCTCAGAAGAGAAATGGCTG...AGTGAGTGCTTCACCTTCCCCGGGTGCCGTTCCCTTCTGCTTGAACAGCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | CAGTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTCAAATGTCTAAGGTCTaGTCCCTCTGCTCCCCAGGC | + |
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Preference number: 2 (lower is better) Translates to: QSWVTFLLPGMMPGPQYSQMSKV*SLCSPG Trigger: GCCTGGGGAGCAGAGGGAGCAGACCTTAGACATTTG...AGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGTTTCAGGCCCAGCCTTaGTGCTTAGCAGCCCCATCC | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKFQAQP*CLAAPS Trigger: GGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTGAAA...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTCAGGGACCATGGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGAGTCTCTCCTTCTGCCTGCTaGAGGCCCCATTGGCTCATA | + |
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Preference number: 2 (lower is better) Translates to: MAQGPWNLCYGRKRRGGVSPSAC*RPHWLI Trigger: TATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGA...GACTCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR TCA 90 bp | ATGGCTCAGGGACCATGGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGAGTCGCCTCCAAATCCTGGTaGCAGGAGGACTTTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: MAQGPWNLCYGRKRRGGVASKSW*QEDFPH Trigger: GTGTGGAAAGTCCTCCTGTCACCAGGATTTGGAGGC...GACTCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | ATGGCTCAGGGACCATGGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGAGTCTCACTTGCATTTCCCTaGGACCGCTCTCCTTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: MAQGPWNLCYGRKRRGGVSLAFP*DRSPSA Trigger: GGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGA...GACTCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGGTCCGCCTCCCACTCTaGGACACTCCTGCTTTCTTT | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKVRLPL*DTPAFF Trigger: AAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGAC...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGAACGCACTTGGAAGCTaGAGACACTCCAGACCCCCA | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKNALGS*RHSRPP Trigger: TGGGGGTCTGGAGTGTCTCCAGCTTCCAAGTGCGTT...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCCGCCTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTGCATTTCCCAAGCACAACAGGACCTaGCACATTTCAAGGCCCAGT | + |
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Preference number: 2 (lower is better) Translates to: CPPPTLGHSCFLSSLAFPKHNRT*HISRPS Trigger: ACTGGGCCTTGAAATGTGGCAGGTCCTGTTGTGCTT...GGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | TGTCCGCCTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTGCATTTCCCTTGAGAACGGTTGGGTaGGCACAAATCTGCAGCTCT | + |
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Preference number: 2 (lower is better) Translates to: CPPPTLGHSCFLSSLAFPLRTVG*AQICSS Trigger: AGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAA...GGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR CCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGCTTAAAGAGAGGATATaGGGCAGGCTTAGGGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKLKERI*GRLRGS Trigger: TGAGCCCCTAAGCCTGCCCCATATCCTCTCTTTAAG...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCAGAAGGGAACGGCACCCGGGGAAGGTGAAGCACTCACTCCCCTTCAGCAAATACAGAATGCAATCTaGAAATGTCTAAGGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: KQKGTAPGEGEALTPLQQIQNAI*KCLRSA Trigger: AGCAGACCTTAGACATTTGCAGATTGCATTCTGTAT...TTGCTGAAGGGGAGTGAGTGCTTCACCTTCCCCGGGTGCCGTTCCCTTCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
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| 3UTR-3UTR GCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGACCCTGCATTTGTGGTaGATTCCTTCAATCTCAGCA | + |
|
Preference number: 2 (lower is better) Translates to: GLFGLQLSPSREGRQALKTLHLW*IPSISA Trigger: TGCTGAGATTGAAGGAATGCACCACAAATGCAGGGT...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR-3UTR GCA 90 bp | ATACTCGTTTTGAGAACGGTTGGGTGGGCACAAATCTGCAGCTCTGAATTCTCCGGGCAGGATACAGAATaGAATCTGCAAATGTCTAAG | + |
|
Preference number: 2 (lower is better) Translates to: ILVLRTVGWAQICSSEFSGQDTE*NLQMSK Trigger: CTTAGACATTTGCAGATTGCATTCTGTATCCTGCCC...GGAGAATTCAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAAAACGAGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | GGCCTGGGCAGTGCCAGGCACCCTCTCCTGCTGAAGTaGTGCTACCAGCAAGCTCCCCAGGACAGCACACCT | + |
|
Preference number: 3 (lower is better) Translates to: GLGSARHPLLLK*CYQQAPQDSTP Trigger: AGGTGTGCTGTCCTGGGGAGCTTGCTGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | TGGAGAGGCAGGCAGACCGGGCTGTGCTGTGGCCACTaGGCTGTGGAGTTAGAGCTGCAAGGCATGGGGGCA | + |
|
Preference number: 3 (lower is better) Translates to: WRGRQTGLCCGH*AVELELQGMGA Trigger: TGCCCCCATGCCTTGCAGCTCTAACTCCACAGCTCAGTGGCCACAGCACAGCCCGGTCTGCCTGCCTCTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | AGGAAGGCCTGGGCAGTGCCAGGCACCCTCTCCTGCTaGAGTGATGCTACCAGCAAGCTCCCCAGGACAGCA | + |
|
Preference number: 3 (lower is better) Translates to: RKAWAVPGTLSC*SDATSKLPRTA Trigger: TGCTGTCCTGGGGAGCTTGCTGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCCTTCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATGGCTTCGCTGAGGCTTaGGTAATCAACATCTCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: HTGRGREGLVRSSEAAEDGFAEA*VINISH Trigger: GTGCGAGATGTTGATTACCAAAGCCTCAGCGAAGCC...ATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR-3UTR CAA 90 bp | CACACCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATCTACACACAGCAGGCTaGAACCAGTCACTCAAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: HTGRGREGLVRSSEAAEDLHTAG*NQSLKD Trigger: GTCCTTGAGTGACTGGTTCAAGCCTGCTGTGTGTAG...ATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR-3UTR CAA 90 bp | CCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATAATGCCCAGTGTCTGTCATTaGATGGCTTCGCTGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: PAEAGRGLSGALRQQRIMPSVCH*MASLRL Trigger: AAGCCTCAGCGAAGCCATCAAATGACAGACACTGGG...CATTATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | CTGGAGACACTCCAGACCCCCAAACTAGAAACTGCCTaGCGCCCCACTGACACGATGGCTCTGAGGACCAAG | + |
|
Preference number: 3 (lower is better) Translates to: LETLQTPKLETA*RPTDTMALRTK Trigger: CTTGGTCCTCAGAGCCATCGTGTCAGTGGGGCGGCAGGCAGTTTCTAGTTTGGGGGTCTGGAGTGTCTCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | TGCAGTCTGTTTGGTTTATGTATCCGGATGCAGTTCTaGGCCGGGCACACCGGCAGAGGCAGGGAGGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: CSLFGLCIRMQF*AGHTGRGREGL Trigger: AAGCCCCTCCCTGCCTCTGCCGGTGTGCCCGGCCCAGAACTGCATCCGGATACATAAACCAAACAGACTGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGCCTGGGCAGTGCCAGGCACCCTCTCCTGCTGAAGTGATGCTACCAGCAAGCGCTTTCTTTCATCACTaGCATTTCCCTGGGACCGCT | + |
|
Preference number: 3 (lower is better) Translates to: RPGQCQAPSPAEVMLPASAFFHH*HFPGTA Trigger: AGCGGTCCCAGGGAAATGCAAGTGATGAAAGAAAGC...GCTTGCTGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | GCGGCCCTCCTCCTGAGGACAAGCATGCTCAGCTTCTaGGGTCTGGAGAGACTGGGTGTGATGGCCATATTC | + |
|
Preference number: 3 (lower is better) Translates to: AALLLRTSMLSF*GLERLGVMAIF Trigger: GAATATGGCCATCACACCCAGTCTCTCCAGACCTCAGAAGCTGAGCATGCTTGTCCTCAGGAGGAGGGCCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | TACAAGTTGGAGAGGCAGGCAGACCGGGCTGTGCTGTaGCCACTGAGCTGTGGAGTTAGAGCTGCAAGGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YKLERQADRAVL*PLSCGVRAARH Trigger: ATGCCTTGCAGCTCTAACTCCACAGCTCAGTGGCCACAGCACAGCCCGGTCTGCCTGCCTCTCCAACTTGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | CAGGATACAGAATGCAATCTGCAAATGTCTAAGGTCTaGTCCCTCTGCTCCCCAGGCAGGCAGGGCTGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: QDTECNLQMSKV*SLCSPGRQGCR Trigger: CCTGCAGCCCTGCCTGCCTGGGGAGCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | TGGGGCAGGCTTAGGGGCTCATGGACACAGGGTCCTTaGTGTTTCCTGTTTGCACCAGAGTTCCTATGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: WGRLRGSWTQGP*CFLFAPEFLCW Trigger: CCAGCATAGGAACTCTGGTGCAAACAGGAAACAGCAAGGACCCTGTGTCCATGAGCCCCTAAGCCTGCCCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | CCTCCTCCTCTGTTTCAGATGCCTCGTCAGAGCTGCTaGCATGCTGTTCCTGGCACTGACTGGGTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PPPLFQMPRQSC*HAVPGTDWVLP Trigger: AGGAAGAACCCAGTCAGTGCCAGGAACAGCATGCCAGCAGCTCTGACGAGGCATCTGAAACAGAGGAGGAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| 3UTR CCA 72 bp | GTGCCTGCCTTCTCCCAACACAGCCAGTCTAGCAGCTaGTCACACACAGCCATTTCTCTTCTGAGGCTGGTC | + |
|
Preference number: 3 (lower is better) Translates to: VPAFSQHSQSSS*SHTAISLLRLV Trigger: GACCAGCCTCAGAAGAGAAATGGCTGTGTGTGACCAGCTGCTAGACTGGCTGTGTTGGGAGAAGGCAGGCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | CCACTCTTTCCAGTTCCTCTCCCCTGTCTAAGGCTTTaGCCAGTATCAGTGTCCGCCTCCCACTCTGGGACA | + |
|
Preference number: 3 (lower is better) Translates to: PLFPVPLPCLRL*PVSVSASHSGT Trigger: TGTCCCAGAGTGGGAGGCGGACACTGATACTGGCCAAAGCCTTAGACAGGGGAGAGGAACTGGAAAGAGTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | CTGCCTGCTGAAGGCCCCATTGGCTCATACTCGTTTTaGGAACGGTTGGGTGGGCACAAATCTGCAGCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LPAEGPIGSYSF*ERLGGHKSAAL Trigger: CAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | CTTGCATTTCCCTGGGACCGCTCTCCTTCTGCCTGCTaGAGGCCCCATTGGCTCATACTCGTTTTGAGAACG | + |
|
Preference number: 3 (lower is better) Translates to: LAFPWDRSPSAC*RPHWLILVLRT Trigger: CGTTCTCAAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | TCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTaGATTTCCCTGGGACCGCTCTCCTTCTGCCTGCTG | + |
|
Preference number: 3 (lower is better) Translates to: SHSGTLLLSFIT*ISLGPLSFCLL Trigger: CAGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | ACACACCATGTACTCATGAAAGGAAGGCCTGGGCAGTaGCAGGCACCCTCTCCTGCTGAAGTGATGCTACCA | + |
|
Preference number: 3 (lower is better) Translates to: THHVLMKGRPGQ*QAPSPAEVMLP Trigger: TGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCCTTCCTTTCATGAGTACATGGTGTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | CTGGTCCTCAGTATTCTGTGGGTGTTGCTTGCCCTCTaGGCCACTACACACAGCAGGCTTGAACCAGTCACT | + |
|
Preference number: 3 (lower is better) Translates to: LVLSILWVLLAL*ATTHSRLEPVT Trigger: AGTGACTGGTTCAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGAGGACCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | GTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTaGTCCTCAGTATTCTGTGGGTGTTGCTTGCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: VLGHLSSPWHDA*SSVFCGCCLPS Trigger: AGAGGGCAAGCAACACCCACAGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | AGGACCAAGGCAGTCCTGGGTCACCTTTCTTCTCCCTaGCATGATGCCTGGTCCTCAGTATTCTGTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: RTKAVLGHLSSP*HDAWSSVFCGC Trigger: ACACCCACAGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTGCCTTGGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | AGTCTAGCAGCTGGTCACACACAGCCATTTCTCTTCTaGGGCTGGTCACAGAATGAGCTGGGCTCACGACTG | + |
|
Preference number: 3 (lower is better) Translates to: SLAAGHTQPFLF*GWSQNELGSRL Trigger: CAGTCGTGAGCCCAGCTCATTCTGTGACCAGCCTCAGAAGAGAAATGGCTGTGTGTGACCAGCTGCTAGACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | AGGGCTGTGTACCTCAAGTGCAAGCCTTTCCCAGAGTaGAGCACAACAGGACCTGCCACATTTCAAGGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RAVYLKCKPFPE*STTGPATFQGP Trigger: TGGGCCTTGAAATGTGGCAGGTCCTGTTGTGCTTCACTCTGGGAAAGGCTTGCACTTGAGGTACACAGCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | GTTGCTTGCCCTCTGGGCCACTACACACAGCAGGCTTaGACCAGTCACTCAAGGACACTAAGTGCAAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: VACPLGHYTQQA*TSHSRTLSARL Trigger: CAGTCTTGCACTTAGTGTCCTTGAGTGACTGGTTCAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | TGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTaGAGCAGAGACCTTGGAAGTGACACTGCAAACTGG | + |
|
Preference number: 3 (lower is better) Translates to: CSLVHQGKAGRH*SRDLGSDTANW Trigger: CCAGTTTGCAGTGTCACTTCCAAGGTCTCTGCTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | AGGCAGCAGAGGATAATGTTTCAGGCCCAGCCTTGCTaGTTAGCAGCCCCATCCAACAGGAACAAAAGCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RQQRIMFQAQPC*LAAPSNRNKSP Trigger: TGGGCTTTTGTTCCTGTTGGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTGAAACATTATCCTCTGCTGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | CTGAGGCAGCAGAGGATAATGTTTCAGGCCCAGCCTTaGTGCTTAGCAGCCCCATCCAACAGGAACAAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: LRQQRIMFQAQP*CLAAPSNRNKS Trigger: GCTTTTGTTCCTGTTGGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTGAAACATTATCCTCTGCTGCCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | CATAAGTGCATGATCCTCCTCTTTGTGGCTTTGAGGTaGCTGGCATTATCACCCACCCACCTCAGTGACGCC | + |
|
Preference number: 3 (lower is better) Translates to: HKCMILLFVALR*LALSPTHLSDA Trigger: GGCGTCACTGAGGTGGGTGGGTGATAATGCCAGCCACCTCAAAGCCACAAAGAGGAGGATCATGCACTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | GGGCTTGAGGCTTGCTGCCAGGATTCTCTCTACCCATaGGCCCTCAACAAACATAAGTGCATGATCCTCCTC | + |
|
Preference number: 3 (lower is better) Translates to: GLEACCQDSLYP*ALNKHKCMILL Trigger: GAGGAGGATCATGCACTTATGTTTGTTGAGGGCTCATGGGTAGAGAGAATCCTGGCAGCAAGCCTCAAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | CACTCCCCTTCAGCAAGAGCAGGGCAGGATACAGAATaGAATCTGCAAATGTCTAAGGTCTGCTCCCTCTGC | + |
|
Preference number: 3 (lower is better) Translates to: HSPSARAGQDTE*NLQMSKVCSLC Trigger: GCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTGCCCTGCTCTTGCTGAAGGGGAGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | TTCATCACTTGCATTTCCCTGGGACCGCTCTCCTTCTaGCTGCTGAAGGCCCCATTGGCTCATACTCGTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FITCISLGPLSF*LLKAPLAHTRF Trigger: AAAACGAGTATGAGCCAATGGGGCCTTCAGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | ACAGCAGGCTTGAACCAGTCACTCAAGGACACTAAGTaGAAGACTGGCTGCCTCCAAATCCTGGTGACAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TAGLNQSLKDTK*KTGCLQILVTG Trigger: TCCTGTCACCAGGATTTGGAGGCAGCCAGTCTTGCACTTAGTGTCCTTGAGTGACTGGTTCAAGCCTGCTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | AGAGACCTTGGAAGTGACACTGCAAACTGGCTCATTTaGCGCTTTTCTTATACAGCCCAGGCCCACCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: RDLGSDTANWLI*RFSYTAQAHLP Trigger: AGGCAGGTGGGCCTGGGCTGTATAAGAAAAGCGGCAAATGAGCCAGTTTGCAGTGTCACTTCCAAGGTCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | GAAGGCAGGCAGGCACTGAAGCAGAGACCTTGGAAGTaGCACTGCAAACTGGCTCATTTGCCGCTTTTCTTA | + |
|
Preference number: 3 (lower is better) Translates to: EGRQALKQRPWK*HCKLAHLPLFL Trigger: TAAGAAAAGCGGCAAATGAGCCAGTTTGCAGTGTCACTTCCAAGGTCTCTGCTTCAGTGCCTGCCTGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | AAGGCTTTGGCCAGTATCAGTGTCCGCCTCCCACTCTaGGACACTCCTGCTTTCTTTCATCACTTGCATTTC | + |
|
Preference number: 3 (lower is better) Translates to: KALASISVRLPL*DTPAFFHHLHF Trigger: GAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACACTGATACTGGCCAAAGCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR TCA 72 bp | TGCTTAGCAGCCCCATCCAACAGGAACAAAAGCCCATaGGGTCTAGGCTTCAGGTTCAAAGCAAGAACCTTG | + |
|
Preference number: 3 (lower is better) Translates to: CLAAPSNRNKSP*GLGFRFKARTL Trigger: CAAGGTTCTTGCTTTGAACCTGAAGCCTAGACCTCATGGGCTTTTGTTCCTGTTGGATGGGGCTGCTAAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | GCTCATTCAGCAAACCTAAAGAAACTCAGCAGGCCATaGCAAAAACAAGGCATCAAAGAGGAGGAGGGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: AHSANLKKLSRP*QKQGIKEEEGL Trigger: CAGACCCTCCTCCTCTTTGATGCCTTGTTTTTGGCATGGCCTGCTGAGTTTCTTTAGGTTTGCTGAATGAGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | ACAGGTTATCACAGATGTCACATGGCTCAGGGACCATaGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: TGYHRCHMAQGP*NLCYGRKRRGG Trigger: TCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCATGTGACATCTGTGATAACCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | CATTATCACCCACCCACCTCAGTGACGCCACCTAATTaGTCCATTTCCTTAACAAAGAGTCTGAAGACAGAC | + |
|
Preference number: 3 (lower is better) Translates to: HYHPPTSVTPPN*SISLTKSLKTD Trigger: GTCTGTCTTCAGACTCTTTGTTAAGGAAATGGAGCAATTAGGTGGCGTCACTGAGGTGGGTGGGTGATAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | GGACAGCACACCTATGACAGTCTTAGTCACAATGGTTaGTTCAACCCCAGCACCACTATCTGTAACAAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: GQHTYDSLSHNG*FNPSTTICNKR Trigger: TCTCTTGTTACAGATAGTGGTGCTGGGGTTGAACCAACCATTGTGACTAAGACTGTCATAGGTGTGCTGTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CCA 72 bp | AAACTGCTAAAGAGACAGGTTATCACAGATGTCACATaGCTCAGGGACCATGGAATCTGTGCTATGGAAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KLLKRQVITDVT*LRDHGICAMEE Trigger: TTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCATGTGACATCTGTGATAACCTGTCTCTTTAGCAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR GCA 72 bp | AAACAACAACAACAACAACAACAACAACAAAAACCCTaGATTTGTGGTGCATTCCTTCAATCTCAGCACTTG | + |
|
Preference number: 3 (lower is better) Translates to: KQQQQQQQQQKP*ICGAFLQSQHL Trigger: CAAGTGCTGAGATTGAAGGAATGCACCACAAATGCAGGGTTTTTGTTGTTGTTGTTGTTGTTGTTGTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | ATGCAGTTCTGGGCCGGGCACACCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCCTCCTCTGTTTCAGATaGCTCGTCAGAGCTGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: MQFWAGHTGRGREGLVRSLLCFR*LVRAAG Trigger: GCCAGCAGCTCTGACGAGGCATCTGAAACAGAGGAG...GCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTGCCCGGCCCAGAACTGCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | CACACCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATATGCCTCGTCAGAGCTaGTGGCATGCTGTTCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: HTGRGREGLVRSSEAAEDMPRQS*WHAVPG Trigger: GCCAGGAACAGCATGCCAGCAGCTCTGACGAGGCAT...ATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGGTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGGGCAGTGCCAGGCACCCTCTCCTGCTGAAGTGATGCTACCAGCAAGCGCTCTTTCTTGGGCCTaGGCGGTCTCACAGAAGCGG | + |
|
Preference number: 4 (lower is better) Translates to: RPGQCQAPSPAEVMLPASALSWA*AVSQKR Trigger: CCGCTTCTGTGAGACCGCCCAGGCCCAAGAAAGAGC...GCTTGCTGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | CCGGCAGAGGCAGGGAGGGGCTTGTCCGGAGCTCTGAGGCAGCAGAGGATAATGCCTCGTCAGAGCTGCTaGCATGCTGTTCCTGGCACT | + |
|
Preference number: 4 (lower is better) Translates to: PAEAGRGLSGALRQQRIMPRQSC*HAVPGT Trigger: AGTGCCAGGAACAGCATGCCAGCAGCTCTGACGAGG...CATTATCCTCTGCTGCCTCAGAGCTCCGGACAAGCCCCTCCCTGCCTCTGCCGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGGCAGTGCCAGGCACCCTCTCCTGCTGAAGTGATGCTACCAGCAAGCTGCTGTTCCTGGCACTaGCTGGGTTCTTCCTTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGQCQAPSPAEVMLPASCCSWH*LGSSFC Trigger: ACAGAAGGAAGAACCCAGTCAGTGCCAGGAACAGCA...GCTTGCTGGTAGCATCACTTCAGCAGGAGAGGGTGCCTGGCACTGCCCAGGCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | AGGCAGGCAGACCGGGCTGTGCTGTGGCCACTGAGCTGTGGAGTTAGAGCTGCACGGCGCTTTGCAGTCTaGTCCTCTGCAGCAATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: RQADRAVLWPLSCGVRAARRFAV*SSAAIL Trigger: TAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGCCG...TGCAGCTCTAACTCCACAGCTCAGTGGCCACAGCACAGCCCGGTCTGCCTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CAA 72 bp | TCCACTCTTTCCAGTTCCTCTCCCCTGTCTAAGGCTTaGGCCAGTATCAGTGTCCGCCTCCCACTCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: STLSSSSPLSKA*ASISVRLPLWD Trigger: GTCCCAGAGTGGGAGGCGGACACTGATACTGGCCAAAGCCTTAGACAGGGGAGAGGAACTGGAAAGAGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR TCA 90 bp | GGGCAGGATACAGAATGCAATCTGCAAATGTCTAAGGTCTGCTCCCTCTGCTCCCCGCATTCTTGGGGATaGCCAGCGTCTGCGGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQDTECNLQMSKVCSLCSPHSWG*PASAAL Trigger: AAGAGCCGCAGACGCTGGTCATCCCCAAGAATGCGG...GGAGCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGATACAGAATGCAATCTGCAAATGTCTAAGGTCTGCTCCCTCTGCTCCCGTGGAACTCTCCACTaGCAGCCCCAGCACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQDTECNLQMSKVCSLCSRGTLH*QPQHWN Trigger: GTTCCAGTGCTGGGGCTGGCAGTGGAGAGTTCCACG...GGAGCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | GGGCAGGATACAGAATGCAATCTGCAAATGTCTAAGGTCTGCTCCCTCTGCTCCGGGATGACCAGCGTCTaGGGCTCTTTCTTGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQDTECNLQMSKVCSLCSGMTSV*GSFLGL Trigger: CAGGCCCAAGAAAGAGCCGCAGACGCTGGTCATCCC...GGAGCAGAGGGAGCAGACCTTAGACATTTGCAGATTGCATTCTGTATCCTGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | ATGGCTCAGGGACCATGGAATCTGTGCTATGGAAGAAAAAGGAGAGGGGGAGTCTCTGCGGCTCTTTCTTaGGCCTGGGCGGTCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: MAQGPWNLCYGRKRRGGVSAALS*AWAVSQ Trigger: CTGTGAGACCGCCCAGGCCCAAGAAAGAGCCGCAGA...GACTCCCCCTCTCCTTTTTCTTCCATAGCACAGATTCCATGGTCCCTGAGCCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CAA 72 bp | CTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTaGCATTTCCCTGGGACCGCTCTCCTTCTGCCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: LPLWDTPAFFHH*HFPGTALLLPA Trigger: AGCAGGCAGAAGGAGAGCGGTCCCAGGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CAA 72 bp | CATGATGCCTGGTCCTCAGTATTCTGTGGGTGTTGCTaGCCCTCTGGGCCACTACACACAGCAGGCTTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HDAWSSVFCGCC*PSGPLHTAGLN Trigger: GTTCAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGAGGACCAGGCATCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTTCCAGCTTGAGCTTCTaGTCCTCGGCCGCATTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: QSWVTFLLPGMMPGPQYSSSLSF*SSAAFL Trigger: CAAGAATGCGGCCGAGGAGCAGAAGCTCAAGCTGGA...AGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | TGTCCGCCTCCCACTCTGGGACACTCCTGCTTTCTTTCATCACTTGCATTTCCCATCTCGGACAAATTCTaGAGGCGCTCGAGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: CPPPTLGHSCFLSSLAFPISDKF*RRSRSP Trigger: TGGGCTCCTCGAGCGCCTCCAGAATTTGTCCGAGAT...GGGAAATGCAAGTGATGAAAGAAAGCAGGAGTGTCCCAGAGTGGGAGGCGGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | CAGTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTAGGTGCCTATACACGTaGAACTCTCCACTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QSWVTFLLPGMMPGPQYSRCLYT*NSPLPA Trigger: GGCTGGCAGTGGAGAGTTCCACGTGTATAGGCACCT...AGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | TCCTCCTCCTCTGTTTCAGATGCCTCGTCAGAGCTGCTGGCATGCTGTTCCTGGTTTGCTTCTCAGCCATaGCATCCATGTAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SSSSVSDASSELLACCSWFASQP*HPCSPA Trigger: GGCAGGACTACATGGATGCCATGGCTGAGAAGCAAA...CCAGGAACAGCATGCCAGCAGCTCTGACGAGGCATCTGAAACAGAGGAGGAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| 3UTR CAA 72 bp | ATCAAGGGAAGGCAGGCAGGCACTGAAGCAGAGACCTaGGAAGTGACACTGCAAACTGGCTCATTTGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: IKGRQAGTEAET*EVTLQTGSFAA Trigger: AGCGGCAAATGAGCCAGTTTGCAGTGTCACTTCCAAGGTCTCTGCTTCAGTGCCTGCCTGCCTTCCCTTGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | TGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCAATTTTATTCTTTCGTGGAACTCTCCACTaGCAGCCCCAGCACTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: WRFFRRFAVCSSAAILFFRGTLH*QPQHWN Trigger: GTTCCAGTGCTGGGGCTGGCAGTGGAGAGTTCCACG...AAAGAATAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTTCTCTCCGCCGTAGGTaGCTATACACGTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: QSWVTFLLPGMMPGPQYSSLRRR*LYTWNS Trigger: AGAGTTCCACGTGTATAGGCACCTACGGCGGAGAGA...AGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | TCTTTTAACTTCTGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCAAAGTCCTGGCCTCTGTaGGAAAGCACTAGCCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SFNFWRFFRRFAVCSSAAKSWPL*ESTSPA Trigger: AGCTGGGCTAGTGCTTTCCCACAGAGGCCAGGACTT...TGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCAGAAGTTAAAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| 3UTR CAA 72 bp | TCTGAGGCAGCAGAGGATAATGTTTCAGGCCCAGCCTaGCTGCTTAGCAGCCCCATCCAACAGGAACAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SEAAEDNVSGPA*LLSSPIQQEQK Trigger: CTTTTGTTCCTGTTGGATGGGGCTGCTAAGCAGCAAGGCTGGGCCTGAAACATTATCCTCTGCTGCCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTAACTTCTGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCATCTCTCCGCCGTAGGTaGCTATACACGTGGAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SFNFWRFFRRFAVCSSAASLRRR*LYTWNS Trigger: AGAGTTCCACGTGTATAGGCACCTACGGCGGAGAGA...TGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCAGAAGTTAAAAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| CDS-3UTR CCA 90 bp | TCTGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCAATTTTATTCTATCTCGGACAAATTCTaGAGGCGCTCGAGGAGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SGAFSGALQSAPLQQFYSISDKF*RRSRSP Trigger: TGGGCTCCTCGAGCGCCTCCAGAATTTGTCCGAGAT...AGAATAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCAGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| CDS-3UTR TCA 90 bp | GAAGAAAAAGGAGAGGGGGAGTCACTTTCTTTAGTGGCAGCGCCACTGGAAAGGCAGCACTGGAACCCATaGCATCTCGGACAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: EEKGEGESLSLVAAPLERQHWNP*HLGQIL Trigger: CAGAATTTGTCCGAGATGTCATGGGTTCCAGTGCTG...CCTTTCCAGTGGCGCTGCCACTAAAGAAAGTGACTCCCCCTCTCCTTTTTCTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | AGACAGGTTATCACAGATGTCACATGGCTCAGGGACCATGGAATCTGTGCTATGCTTTTTCCGGCGCTTTaGAGTCTGCTCCTCTGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RQVITDVTWLRDHGICAMLFPAL*SLLLCS Trigger: GCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAG...CATAGCACAGATTCCATGGTCCCTGAGCCATGTGACATCTGTGATAACCTGTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | TGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCAATTTTATTCTTTAGGTGCCTATACACGTaGAACTCTCCACTGCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: WRFFRRFAVCSSAAILFFRCLYT*NSPLPA Trigger: GGCTGGCAGTGGAGAGTTCCACGTGTATAGGCACCT...AAAGAATAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| 3UTR CAA 72 bp | ACCAAGAGTCAGCTAACCTGGAACACAGATAACCCCTaGGCCAGAAACCTCTCCCCAGAAGCTTCCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TKSQLTWNTDNP*ARNLSPEASFS Trigger: TGAGAAGGAAGCTTCTGGGGAGAGGTTTCTGGCCAAGGGGTTATCTGTGTTCCAGGTTAGCTGACTCTTGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | CAGTCCTGGGTCACCTTTCTTCTCCCTGGCATGATGCCTGGTCCTCAGTATTCTCTCTGGAATTGGAACTaGTTTGTCCGGGTTCTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: QSWVTFLLPGMMPGPQYSLWNWN*FVRVLH Trigger: ATGAAGAACCCGGACAAAGCAGTTCCAATTCCAGAG...AGAATACTGAGGACCAGGCATCATGCCAGGGAGAAGAAAGGTGACCCAGGACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | GGTTTATTTGGCTTGCAGCTTAGTCCATCAAGGGAAGGCAGGCAGGCACTGAAGGTTCCTGGCACTGACTaGGTTCTTCCTTCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GLFGLQLSPSREGRQALKVPGTD*VLPSVS Trigger: AGAAACAGAAGGAAGAACCCAGTCAGTGCCAGGAAC...CTTCAGTGCCTGCCTGCCTTCCCTTGATGGACTAAGCTGCAAGCCAAATAAACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTATTCTGTGGGTGTTGCTTGCCCTCTGGGCCACTACACACAGCAGGCTTGTCTCTTCTGAAACTCTaGATCCAGTTTTTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVFCGCCLPSGPLHTAGLSLLKL*IQFLLL Trigger: GAGAAGCAAAAACTGGATGCAGAGTTTCAGAAGAGA...CAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR GCA 90 bp | TCAGTATTCTGTGGGTGTTGCTTGCCCTCTGGGCCACTACACACAGCAGGCTTGTGCAGTCTGCTCCTCTaGAGCAATTTTATTCTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVFCGCCLPSGPLHTAGLCSLLL*SNFILF Trigger: GAAAAGAATAAAATTGCTGCAGAGGAGCAGACTGCA...CAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR CCA 90 bp | ATACTCGTTTTGAGAACGGTTGGGTGGGCACAAATCTGCAGCTCTGAATTCTCCTTTGCTTCTCAGCCATaGCATCCATGTAGTCCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVLRTVGWAQICSSEFSFASQP*HPCSPA Trigger: GGCAGGACTACATGGATGCCATGGCTGAGAAGCAAA...GGAGAATTCAGAGCTGCAGATTTGTGCCCACCCAACCGTTCTCAAAACGAGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| 3UTR CAA 72 bp | AACAAACATAAGTGCATGATCCTCCTCTTTGTGGCTTaGAGGTGGCTGGCATTATCACCCACCCACCTCAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKHKCMILLFVA*RWLALSPTHLS Trigger: ACTGAGGTGGGTGGGTGATAATGCCAGCCACCTCAAAGCCACAAAGAGGAGGATCATGCACTTATGTTTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS-3UTR TCA 90 bp | AACTTCTGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCAATTTTAAATAGACAGATCCCATaGCATCTCGGACAAATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NFWRFFRRFAVCSSAAILNRQIP*HLGQIL Trigger: CAGAATTTGTCCGAGATGTCATGGGATCTGTCTATT...TAAAATTGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCAGAAGTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| CDS-3UTR GCA 90 bp | TCTTTTAACTTCTGGCGCTTTTTCCGGCGCTTTGCAGTCTGCTCCTCTGCAGCATCTCTTCTGAAACTCTaGATCCAGTTTTTGCTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SFNFWRFFRRFAVCSSAASLLKL*IQFLLL Trigger: GAGAAGCAAAAACTGGATGCAGAGTTTCAGAAGAGA...TGCTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGCGCCAGAAGTTAAAAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| CDS-3UTR GCA 90 bp | TTCTTTGCCAGTAACTTCTTCTCTTTTAACTTCTGGCGCTTTTTCCGGCGCTTTTCTGCATCCAGTTTTTaGTTCTCAGCCATGGCATCC | + |
|
Preference number: 4 (lower is better) Translates to: FFASNFFSFNFWRFFRRFSASSF*FSAMAS Trigger: GGATGCCATGGCTGAGAAGCAAAAACTGGATGCAGA...AAAGCGCCGGAAAAAGCGCCAGAAGTTAAAAGAGAAGAAGTTACTGGCAAAGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
||
| 3UTR CAA 72 bp | CATTCAATACTAAATGACCAGGCTGTCAAAGGTCTGTaGAGAAAGCGAATGAAAAGGGTAACCAGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HSILNDQAVKGL*RKRMKRVTRTL Trigger: GAGGGTCCTGGTTACCCTTTTCATTCGCTTTCTCAACAGACCTTTGACAGCCTGGTCATTTAGTATTGAATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS GCA 90 bp | TTGAGCTTCTGCTCCTCGGCCGCATTCTTGGGGATGACCAGCGTCTaGGGCTCTTTCTTGGGCCTGGGCGGTCTCACAGAAGCGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LSFCSSAAFLGMTSV*GSFLGLGGLTEAAA Trigger: TGCTGCCGCTTCTGTGAGACCGCCCAGGCCCAAGAAAGAGCCGCAGACGCTGGTCATCCCCAAGAATGCGGCCGAGGAGCAGAAGCTCAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGAAGGGAACGGCACCCGGGGAAGGTGAAGCACTCACTCCCCTTCAGCAAGTCTGCGGCTCTTTCTaGGGCCTGGGCGGTCTCACA | + |
|
Preference number: 5 (lower is better) Translates to: KQKGTAPGEGEALTPLQQVCGSF*GLGGLT Trigger: TGTGAGACCGCCCAGGCCCAAGAAAGAGCCGCAGAC...TTGCTGAAGGGGAGTGAGTGCTTCACCTTCCCCGGGTGCCGTTCCCTTCTGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS GCA 90 bp | ACTGCTTTGTCCGGGTTCTTCATGAGCCGCTCCAGCTTGAGCTTCTaGTCCTCGGCCGCATTCTTGGGGATGACCAGCGTCTGCGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TALSGFFMSRSSLSF*SSAAFLGMTSVCGS Trigger: AGAGCCGCAGACGCTGGTCATCCCCAAGAATGCGGCCGAGGAGCAGAAGCTCAAGCTGGAGCGGCTCATGAAGAACCCGGACAAAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS GCA 90 bp | GGTACTCTCTCCGCCGTAGGTGCCTATACACGTGGAACTCTCCACTaGCAGCCCCAGCACTGGAACCTCAGTGCTTGCTGGCATAAAGTC | + |
|
Preference number: 5 (lower is better) Translates to: GTLSAVGAYTRGTLH*QPQHWNLSACWHKV Trigger: GACTTTATGCCAGCAAGCACTGAGGTTCCAGTGCTGGGGCTGGCAGTGGAGAGTTCCACGTGTATAGGCACCTACGGCGGAGAGAGTACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123921.8 ENSMUST00000149151.2 |
||
| CDS CCA 90 bp | GTAGGTGCCTATACACGTGGAACTCTCCACTGCCAGCCCCAGCACTaGAACCTCAGTGCTTGCTGGCATAAAGTCCTGGCCTCTGTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGAYTRGTLHCQPQH*NLSACWHKVLASVG Trigger: TCCCACAGAGGCCAGGACTTTATGCCAGCAAGCACTGAGGTTCCAGTGCTGGGGCTGGCAGTGGAGAGTTCCACGTGTATAGGCACCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123921.8 ENSMUST00000149151.2 |
||
| CDS-3UTR CAA 90 bp | TCAGTATTCTGTGGGTGTTGCTTGCCCTCTGGGCCACTACACACAGCAGGCTTGGCTTTTTCCGGCGCTTaGCAGTCTGCTCCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SVFCGCCLPSGPLHTAGLAFSGA*QSAPLQ Trigger: CTGCAGAGGAGCAGACTGCAAAGCGCCGGAAAAAGC...CAAGCCTGCTGTGTGTAGTGGCCCAGAGGGCAAGCAACACCCACAGAATACTGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151786.8 |
||
| CDS CCA 90 bp | AGCACTGGAACCTCAGTGCTTGCTGGCATAAAGTCCTGGCCTCTGTaGGAAAGCACTAGCCCAGCCATGACATCTCGGACAAATTCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: STGTSVLAGIKSWPL*ESTSPAMTSRTNSG Trigger: TCCAGAATTTGTCCGAGATGTCATGGCTGGGCTAGTGCTTTCCCACAGAGGCCAGGACTTTATGCCAGCAAGCACTGAGGTTCCAGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149151.2 |
||
| CDS GCA 72 bp | TGCTCCTCGGCCGCATTCTTGGGGATGACCAGCGTCTaGGGCTCTTTCTTGGGCCTGGGCGGTCTCACAGAA | + |
|
Preference number: 6 (lower is better) Translates to: CSSAAFLGMTSV*GSFLGLGGLTE Trigger: TTCTGTGAGACCGCCCAGGCCCAAGAAAGAGCCGCAGACGCTGGTCATCCCCAAGAATGCGGCCGAGGAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS CAA 72 bp | GCATTCTTGGGGATGACCAGCGTCTGCGGCTCTTTCTaGGGCCTGGGCGGTCTCACAGAAGCGGCAGCAGGA | + |
|
Preference number: 6 (lower is better) Translates to: AFLGMTSVCGSF*GLGGLTEAAAG Trigger: TCCTGCTGCCGCTTCTGTGAGACCGCCCAGGCCCAAGAAAGAGCCGCAGACGCTGGTCATCCCCAAGAATGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS GCA 72 bp | TCCGGGTTCTTCATGAGCCGCTCCAGCTTGAGCTTCTaGTCCTCGGCCGCATTCTTGGGGATGACCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: SGFFMSRSSLSF*SSAAFLGMTSV Trigger: GACGCTGGTCATCCCCAAGAATGCGGCCGAGGAGCAGAAGCTCAAGCTGGAGCGGCTCATGAAGAACCCGGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS CAA 90 bp | GGAATTGGAACTGCTTTGTCCGGGTTCTTCATGAGCCGCTCCAGCTaGAGCTTCTGCTCCTCGGCCGCATTCTTGGGGATGACCAGCGTC | + |
|
Preference number: 6 (lower is better) Translates to: GIGTALSGFFMSRSS*SFCSSAAFLGMTSV Trigger: GACGCTGGTCATCCCCAAGAATGCGGCCGAGGAGCAGAAGCTCAAGCTGGAGCGGCTCATGAAGAACCCGGACAAAGCAGTTCCAATTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS CAA 72 bp | ACTGCTTTGTCCGGGTTCTTCATGAGCCGCTCCAGCTaGAGCTTCTGCTCCTCGGCCGCATTCTTGGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: TALSGFFMSRSS*SFCSSAAFLGM Trigger: CATCCCCAAGAATGCGGCCGAGGAGCAGAAGCTCAAGCTGGAGCGGCTCATGAAGAACCCGGACAAAGCAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000149151.2 ENSMUST00000151786.8 |
||
| CDS CCA 72 bp | TATACACGTGGAACTCTCCACTGCCAGCCCCAGCACTaGAACCTCAGTGCTTGCTGGCATAAAGTCCTGGCC | + |
|
Preference number: 6 (lower is better) Translates to: YTRGTLHCQPQH*NLSACWHKVLA Trigger: GGCCAGGACTTTATGCCAGCAAGCACTGAGGTTCCAGTGCTGGGGCTGGCAGTGGAGAGTTCCACGTGTATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000123921.8 ENSMUST00000149151.2 |
||
| CDS CCA 72 bp | ACCTCAGTGCTTGCTGGCATAAAGTCCTGGCCTCTGTaGGAAAGCACTAGCCCAGCCATGACATCTCGGACA | + |
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Preference number: 6 (lower is better) Translates to: TSVLAGIKSWPL*ESTSPAMTSRT Trigger: TGTCCGAGATGTCATGGCTGGGCTAGTGCTTTCCCACAGAGGCCAGGACTTTATGCCAGCAAGCACTGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149151.2 |
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| CDS CCA 72 bp | AGCACTGGAACCTCAGTGCTTGCTGGCATAAAGTCCTaGCCTCTGTGGGAAAGCACTAGCCCAGCCATGACA | + |
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Preference number: 6 (lower is better) Translates to: STGTSVLAGIKS*PLWESTSPAMT Trigger: TGTCATGGCTGGGCTAGTGCTTTCCCACAGAGGCCAGGACTTTATGCCAGCAAGCACTGAGGTTCCAGTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000149151.2 |
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| CDS TCA 72 bp | GCACTAGCCCAGCTGAGTACAAATAGACAGATCCCATaGCATCTCGGACAAATTCTGGAGGCGCTCGAGGAG | + |
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Preference number: 6 (lower is better) Translates to: ALAQLSTNRQIP*HLGQILEALEE Trigger: CTCCTCGAGCGCCTCCAGAATTTGTCCGAGATGTCATGGGATCTGTCTATTTGTACTCAGCTGGGCTAGTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123921.8 |
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| CDS CAA 90 bp | GACTGGGTTCTTCCTTCTGTTTCTTCTGTTCAAGTTTCATCTTCTTaGCCAGTAACTTCTTCTCTTTTAACTTCTGGCTTCTCAGCCATG | + |
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Preference number: 6 (lower is better) Translates to: DWVLPSVSSVQVSSS*PVTSSLLTSGFSAM Trigger: CATGGCTGAGAAGCCAGAAGTTAAAAGAGAAGAAGTTACTGGCAAAGAAGATGAAACTTGAACAGAAGAAACAGAAGGAAGAACCCAGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149151.2 |
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