Pregenerated sensors for PRKN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000023826Ensembl transcript IDs: ENSMUST00000168593.9, ENSMUST00000179624.8, ENSMUST00000186406.2, ENSMUST00000191124.7, ENSMUST00000218435.2, ENSMUST00000233294.2, ENSMUST00000233411.2, ENSMUST00000233436.2, ENSMUST00000233634.2, ENSMUST00000233782.2
Found 247 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AACCCGCAGCCCAGGCCGTTGCCCCCTTCGCAGGTGACTTTCCTCTaGCCCTGTTCAGGTAGCAGTCCAGCTCCACAGCCAGGACGGGGG | + |
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Preference number: 1 (lower is better) Translates to: NPQPRPLPPSQVTFL*PCSGSSPAPQPGRG Trigger: CCCCCGTCCTGGCTGTGGAGCTGGACTGCTACCTGAACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGGGTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR TCA 90 bp | GGCAGAAAACAAACCCGCAGCCCAGGCCGTTGCCCCCTTCGCAGGTaGCTTTCCTCTGGCCCTGTTCAGGTAGCAGTCCAGCTCCACAGC | + |
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Preference number: 1 (lower is better) Translates to: GRKQTRSPGRCPLRR*LSSGPVQVAVQLHS Trigger: GCTGTGGAGCTGGACTGCTACCTGAACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGGGTTTGTTTTCTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR GCA 90 bp | AGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTaGAGCACGCATTCCTCGGCCCCATACTGCTGGTACCTAGTGTAC | + |
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Preference number: 1 (lower is better) Translates to: SPAPQPGRGHSTPPI*STHSSAPYCWYLVY Trigger: GTACACTAGGTACCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR CCA 90 bp | GAGCTTGCTCAGCGGCTCTTTTGTCCACCCTGTAGGCCTGAGAAGTaGCTCCTGAGGGTTCGAGCAGTGAGTCGCAATCCCCTTCATGGT | + |
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Preference number: 1 (lower is better) Translates to: ELAQRLFCPPCRPEK*LLRVRAVSRNPLHG Trigger: ACCATGAAGGGGATTGCGACTCACTGCTCGAACCCTCAGGAGCCACTTCTCAGGCCTACAGGGTGGACAAAAGAGCCGCTGAGCAAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR TCA 90 bp | TTTCAATTGGCACGTTGCAGCGAGGACAAGGCTTGGTGGTCTTCTTaGTGGTTTCCTTGGAGGCCTCCTCCCAGCGAGCTTGCTCAGCGG | + |
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Preference number: 1 (lower is better) Translates to: FQLARCSEDKAWWSS*WFPWRPPPSELAQR Trigger: CCGCTGAGCAAGCTCGCTGGGAGGAGGCCTCCAAGGAAACCATCAAGAAGACCACCAAGCCTTGTCCTCGCTGCAACGTGCCAATTGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR CCA 90 bp | TCTTGGTGTGTGTGTATTGCCCTGTCTGTAGGACCACTGGGTGGATaGGGCTCCCTGGGGCTTAACAGCAGAGGAGGGAGCAGATATGCA | + |
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Preference number: 1 (lower is better) Translates to: SWCVCIALSVGPLGG*GSLGLNSRGGSRYA Trigger: TGCATATCTGCTCCCTCCTCTGCTGTTAAGCCCCAGGGAGCCCCATCCACCCAGTGGTCCTACAGACAGGGCAATACACACACACCAAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CCA 90 bp | GAAGTGGCTCCTGAGGGTTCGAGCAGTGAGTCGCAATCCCCTTCATaGTATGCTTCCTTACAGTCCCGGCAGAAAACAAACCCGCAGCCC | + |
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Preference number: 1 (lower is better) Translates to: EVAPEGSSSESQSPS*YASLQSRQKTNPQP Trigger: GGGCTGCGGGTTTGTTTTCTGCCGGGACTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGAACCCTCAGGAGCCACTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR GCA 90 bp | AGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGCTTaGACTGGGGCTGAGGACACTTCATGTGCATACATCCTCCGTTTT | + |
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Preference number: 1 (lower is better) Translates to: RLGSTHSHSSSTTPA*TGAEDTSCAYILRF Trigger: AAAACGGAGGATGTATGCACATGAAGTGTCCTCAGCCCCAGTGCAAGCTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR GCA 90 bp | GGCCAAGTGACATCTCTCTCTACACGTCAAACCAGTGATCTCCCATaGAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCA | + |
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Preference number: 1 (lower is better) Translates to: GQVTSLSTRQTSDLP*RLGSTHSHSSSTTP Trigger: TGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAGATGTCACTTGGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR CCA 90 bp | ACAGCAGAGGAGGGAGCAGATATGCAGAGGTGTCCCCACTTGTGGTaGAAGGGGTCAGGCATACTCTCATTCAGATGGTCGAGGGATGCT | + |
|
Preference number: 1 (lower is better) Translates to: TAEEGADMQRCPHLW*KGSGILSFRWSRDA Trigger: AGCATCCCTCGACCATCTGAATGAGAGTATGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCTCTGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR GCA 90 bp | AGTGTGATGCATGTTGATCTGAAGGCTATCTTGGTGTGTGTGTATTaGCCTGTCTGTAGGACCACTGGGTGGATGGGGCTCCCTGGGGCT | + |
|
Preference number: 1 (lower is better) Translates to: SVMHVDLKAILVCVY*PVCRTTGWMGLPGA Trigger: AGCCCCAGGGAGCCCCATCCACCCAGTGGTCCTACAGACAGGGCAATACACACACACCAAGATAGCCTTCAGATCAACATGCATCACACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR GCA 90 bp | CCCTTTACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATaGGATTACGTCACACGGGTGTGGAAGGAGGCAGAGGCAAGCACA | + |
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Preference number: 1 (lower is better) Translates to: PFTQSRTANIVLASQ*DYVTRVWKEAEAST Trigger: TGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTAAAGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CCA 90 bp | TTAACAGCAGAGGAGGGAGCAGATATGCAGAGGTGTCCCCACTTGTaGTGGAAGGGGTCAGGCATACTCTCATTCAGATGGTCGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: LTAEEGADMQRCPHL*WKGSGILSFRWSRD Trigger: ATCCCTCGACCATCTGAATGAGAGTATGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCTCTGCTGTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CCA 90 bp | CTTCAGGGAGTCCCTTTACCCAAAGCAGAACAGCAAACATTGTCCTaGCTTCCCAATGCGATTACGTCACACGGGTGTGGAAGGAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: LQGVPLPKAEQQTLS*LPNAITSHGCGRRQ Trigger: CTGCCTCCTTCCACACCCGTGTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTAAAGGGACTCCCTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR TCA 90 bp | GTCCCTGCCAGAGATGCCTCCCATCGGATCTTTGTCATTCTTGCTTaGGGTGCAGTAAACTTTGAGGAACCAGCTGGTAGGGACATTGGC | + |
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Preference number: 1 (lower is better) Translates to: VPARDASHRIFVILA*GAVNFEEPAGRDIG Trigger: GCCAATGTCCCTACCAGCTGGTTCCTCAAAGTTTACTGCACCTCAAGCAAGAATGACAAAGATCCGATGGGAGGCATCTCTGGCAGGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
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| 3UTR GCA 90 bp | GGGTGCTGTGGTTTTCTGTGGGTGCCCTGGAAAGGATCTAGGGGCTaGTTCTGTAATCTGCAGCCTGTGTTTGTGTGTGCGCATTTATGT | + |
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Preference number: 1 (lower is better) Translates to: GCCGFLWVPWKGSRG*FCNLQPVFVCAHLC Trigger: ACATAAATGCGCACACACAAACACAGGCTGCAGATTACAGAAGCAGCCCCTAGATCCTTTCCAGGGCACCCACAGAAAACCACAGCACCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CCA 90 bp | GAGTGTGGAGAGCAGCATAACTCGACTCGGGAGAAGCAGGTGTCCTaGGCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATTGCTTT | + |
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Preference number: 1 (lower is better) Translates to: ECGEQHNSTREKQVS*ASSRFYREEGENCF Trigger: AAAGCAATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGCCCAGGACACCTGCTTCTCCCGAGTCGAGTTATGCTGCTCTCCACACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
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| 3UTR GCA 90 bp | CAGGGCTGGAGAGATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTaGAGAGGACCTGATTTCTGCTCCCAGCCTCACAGTTACCTAGAG | + |
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Preference number: 1 (lower is better) Translates to: QGWRDGSGIKRTFCS*RGPDFCSQPHSYLE Trigger: CTCTAGGTAACTGTGAGGCTGGGAGCAGAAATCAGGTCCTCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATCTCTCCAGCCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| 3UTR CCA 90 bp | AAGTGTGCTTCTGAGAATCCTCAGAGGTGTTACTTACCCAGGGCGTaGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCT | + |
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Preference number: 1 (lower is better) Translates to: KCASENPQRCYLPRA*QQPWKTLPTSLMAS Trigger: AGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGGTAAGTAACACCTCTGAGGATTCTCAGAAGCACACTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR TCA 90 bp | TACTGCTGGTACCTAGTGTACTGCTCTTCTCCAAGGATCCTGAAGTaGTGGAGCTCTTTAATCAGGGAGTTGGGACAGCCAGCTACACAC | + |
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Preference number: 1 (lower is better) Translates to: YCWYLVYCSSPRILK*WSSLIRELGQPATH Trigger: GTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGGAGAAGAGCAGTACACTAGGTACCAGCAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR TCA 90 bp | AGTCTTGTGACACAATACAAGTGGAAACAGTCCAAACAGATCACGTaGCGGTGGTTACACTGGAAGACCAGGACAGGGCTCCTGACATCT | + |
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Preference number: 1 (lower is better) Translates to: SLVTQYKWKQSKQIT*RWLHWKTRTGLLTS Trigger: AGATGTCAGGAGCCCTGTCCTGGTCTTCCAGTGTAACCACCGTCACGTGATCTGTTTGGACTGTTTCCACTTGTATTGTGTCACAAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| 3UTR TCA 90 bp | GCCAGCTGGCCTTTCCTCACACCACAAGATAACATCATTTCTATATaGTTTTTAGCTCTAGGCCTCAAGTTTGGTAGCCCCACCACCACC | + |
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Preference number: 1 (lower is better) Translates to: ASWPFLTPQDNIISI*FLALGLKFGSPTTT Trigger: GGTGGTGGTGGGGCTACCAAACTTGAGGCCTAGAGCTAAAAATCATATAGAAATGATGTTATCTTGTGGTGTGAGGAAAGGCCAGCTGGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR TCA 90 bp | CCTGTTGCTGGTGATCAGGTTCAAAGCTACCGACGTGTCCTTGTCTaGGGTTGGGTGTGCTCCACATTTAAAGAAAAATTCAGCTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: PVAGDQVQSYRRVLV*GWVCSTFKEKFSSG Trigger: ACCAGAGCTGAATTTTTCTTTAAATGTGGAGCACACCCAACCTCAGACAAGGACACGTCGGTAGCTTTGAACCTGATCACCAGCAACAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| 3UTR TCA 90 bp | TGTACTATGTGTACAATACTCTGTTGTTCCAGGTCACAGTTCTGCTaGAGACACTGGATCTTTGAAAGGCTCACAGAGAACTCCAGGCCT | + |
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Preference number: 1 (lower is better) Translates to: CTMCTILCCSRSQFC*RHWIFERLTENSRP Trigger: AGGCCTGGAGTTCTCTGTGAGCCTTTCAAAGATCCAGTGTCTTCAGCAGAACTGTGACCTGGAACAACAGAGTATTGTACACATAGTACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233782.2 |
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| 3UTR CCA 90 bp | AAAGTCAACCTAACATACCAGGATATTAAGAAATTTGTTCAGGGCTaGAGAGATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTGCAGA | + |
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Preference number: 1 (lower is better) Translates to: KVNLTYQDIKKFVQG*RDGSGIKRTFCSCR Trigger: TCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATCTCTCCAGCCCTGAACAAATTTCTTAATATCCTGGTATGTTAGGTTGACTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| 3UTR GCA 90 bp | TTCAGGTATTTCTTAATACACTTCACAGAAAGAGAAAGATTGCTTTaGAGAGGTTTGATTTCCACTCTTCTGACATCCACTTTTATCCCA | + |
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Preference number: 1 (lower is better) Translates to: FRYFLIHFTERERLL*RGLISTLLTSTFIP Trigger: TGGGATAAAAGTGGATGTCAGAAGAGTGGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTATTAAGAAATACCTGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 90 bp | CAGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTaGCAGCACGCATTCCTCGGCCCCATACTGCTGGTACCTAGTGTA | + |
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Preference number: 2 (lower is better) Translates to: QSSSTARTGAQHTSH*QHAFLGPILLVPSV Trigger: TACACTAGGTACCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR CAA 90 bp | GCTTCCTTACAGTCCCGGCAGAAAACAAACCCGCAGCCCAGGCCGTaGCCCCCTTCGCAGGTGACTTTCCTCTGGCCCTGTTCAGGTAGC | + |
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Preference number: 2 (lower is better) Translates to: ASLQSRQKTNPQPRP*PPSQVTFLWPCSGS Trigger: GCTACCTGAACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGGGTTTGTTTTCTGCCGGGACTGTAAGGAAGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGTAGCAGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTGCGCCTGTTGCTGGTaGTCAGGTTCAAAGCTACCG | + |
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Preference number: 2 (lower is better) Translates to: SGSSPAPQPGRGHSTPPICACCW*SGSKLP Trigger: CGGTAGCTTTGAACCTGATCACCAGCAACAGGCGCA...AATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACTGCTACCTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGCTTCGACGTGTCCTTGTCTaGGGTTGGGTGTGCTCCACA | + |
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Preference number: 2 (lower is better) Translates to: SHAGSVPLTATVPAPLQLRRVLV*GWVCST Trigger: TGTGGAGCACACCCAACCTCAGACAAGGACACGTCG...AAGCTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| 3UTR-3UTR CCA 90 bp | CCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACACTGTGGAGTGCCTCCTCCCCCTaGGGCCAGCGGGTGCTGTGG | + |
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Preference number: 2 (lower is better) Translates to: PTIHTHTMQAVIHAHTLWSASSP*GQRVLW Trigger: CCACAGCACCCGCTGGCCCCAGGGGGAGGAGGCACT...CCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR-3UTR CCA 90 bp | GTTCGAGCAGTGAGTCGCAATCCCCTTCATGGTATGCTTCCTTACAGTCCCGGCGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGG | + |
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Preference number: 2 (lower is better) Translates to: VRAVSRNPLHGMLPYSPGGQSGD*HSPLIR Trigger: CCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCC...GCCGGGACTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| 3UTR CAA 90 bp | GGCTTAACAGCAGAGGAGGGAGCAGATATGCAGAGGTGTCCCCACTaGTGGTGGAAGGGGTCAGGCATACTCTCATTCAGATGGTCGAGG | + |
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Preference number: 2 (lower is better) Translates to: GLTAEEGADMQRCPH*WWKGSGILSFRWSR Trigger: CCTCGACCATCTGAATGAGAGTATGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCTCTGCTGTTAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 90 bp | CAGGGAGTTGGGACAGCCAGCTACACACGGCAGGGAGTAGCCAAGTaGAGCATCGTGGACAAACTGCCGATCGTTGAGTCTTGTGACACA | + |
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Preference number: 2 (lower is better) Translates to: QGVGTASYTRQGVAK*SIVDKLPIVESCDT Trigger: TGTGTCACAAGACTCAACGATCGGCAGTTTGTCCACGATGCTCAACTTGGCTACTCCCTGCCGTGTGTAGCTGGCTGTCCCAACTCCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR CAA 90 bp | TTTTCAATTGGCACGTTGCAGCGAGGACAAGGCTTGGTGGTCTTCTaGATGGTTTCCTTGGAGGCCTCCTCCCAGCGAGCTTGCTCAGCG | + |
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Preference number: 2 (lower is better) Translates to: FSIGTLQRGQGLVVF*MVSLEASSQRACSA Trigger: CGCTGAGCAAGCTCGCTGGGAGGAGGCCTCCAAGGAAACCATCAAGAAGACCACCAAGCCTTGTCCTCGCTGCAACGTGCCAATTGAAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAGGGCGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTCCCTCATCTAAGCTCTaGCATTCGAGTGAGCCAGAG | + |
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Preference number: 2 (lower is better) Translates to: PRAWQQPWKTLPTSLMASPSSKL*HSSEPE Trigger: CTCTGGCTCACTCGAATGTCAGAGCTTAGATGAGGG...AGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR-3UTR GCA 90 bp | GATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGCATCGTGGACAAACTaGCGATCGTTGAGTCTTGTG | + |
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Preference number: 2 (lower is better) Translates to: DLPCRLGSTHSHSSSTTPASWTN*RSLSLV Trigger: CACAAGACTCAACGATCGGCAGTTTGTCCACGATGC...TGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR-3UTR GCA 90 bp | ACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCATCCCCTTCATGGTATaGTTCCTTACAGTCCCGGCA | + |
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Preference number: 2 (lower is better) Translates to: TSDLPCRLGSTHSHSSSTIPFMV*FLTVPA Trigger: TGCCGGGACTGTAAGGAAGCATACCATGAAGGGGAT...GGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR-3UTR CCA 90 bp | GTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCATGTAGGCCTGAGAAGTaGCTCCTGAGGGTTCGAGCA | + |
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Preference number: 2 (lower is better) Translates to: VKPVISHAGSVPLTATVPCRPEK*LLRVRA Trigger: TGCTCGAACCCTCAGGAGCCACTTCTCAGGCCTACA...TGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGCAGGTGTCCTGGGCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATAGCCTCACATGTCCCTaGCAGAGATGCCTCCCATCG | + |
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Preference number: 2 (lower is better) Translates to: EKQVSWASSRFYREEGENSLTCP*QRCLPS Trigger: CGATGGGAGGCATCTCTGGCAGGGACATGTGAGGCT...ATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGCCCAGGACACCTGCTTCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
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| 3UTR-3UTR CCA 90 bp | TACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATGCGATTACGTCACGGCCAGCGGGTGCTGTaGTTTTCTGTGGGTGCCCTG | + |
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Preference number: 2 (lower is better) Translates to: YPKQNSKHCPGFPMRLRHGQRVL*FSVGAL Trigger: CAGGGCACCCACAGAAAACCACAGCACCCGCTGGCC...GTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR-3UTR CCA 90 bp | TACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATGCGATTACGTCACTGGGAGCTGGCTGGGTaGAGTCTAGGGCCACTGGGA | + |
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Preference number: 2 (lower is better) Translates to: YPKQNSKHCPGFPMRLRHWELAG*SLGPLG Trigger: TCCCAGTGGCCCTAGACTCCACCCAGCCAGCTCCCA...GTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR-3UTR GCA 90 bp | GAGAAGCAGGTGTCCTGGGCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATGGGCTTCAGAAGTTGTaGCTCCCTCACACAGCTCCT | + |
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Preference number: 2 (lower is better) Translates to: EKQVSWASSRFYREEGENGLQKL*LPHTAP Trigger: AGGAGCTGTGTGAGGGAGGCACAACTTCTGAAGCCC...ATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGCCCAGGACACCTGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
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| 3UTR-3UTR GCA 90 bp | GTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCATCGTGGACAAACTaGCGATCGTTGAGTCTTGTG | + |
|
Preference number: 2 (lower is better) Translates to: VKPVISHAGSVPLTATVPASWTN*RSLSLV Trigger: CACAAGACTCAACGATCGGCAGTTTGTCCACGATGC...TGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR CAA 90 bp | GAGAGGAAGGAGAAAATTGCTTTCTTTGTGGAAGTGCAAGCCCACTaGACAAATGAGCTCCCGGAGGGCTTCAGAAGTTGTGCCTCCCTC | + |
|
Preference number: 2 (lower is better) Translates to: ERKEKIAFFVEVQAH*TNELPEGFRSCASL Trigger: GAGGGAGGCACAACTTCTGAAGCCCTCCGGGAGCTCATTTGTCAAGTGGGCTTGCACTTCCACAAAGAAAGCAATTTTCTCCTTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR-3UTR GCA 90 bp | CCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACACTGTGGAGGAGGGAGCAGATATaGAGAGGTGTCCCCACTTGT | + |
|
Preference number: 2 (lower is better) Translates to: PTIHTHTMQAVIHAHTLWRREQI*RGVPTC Trigger: ACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCT...CCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR GCA 90 bp | GAGAAGCAGGTGTCCTGGGCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATGAGTACATTCATTTTTaGCTGTGTTTCACCCCCACA | + |
|
Preference number: 2 (lower is better) Translates to: EKQVSWASSRFYREEGENEYIHF*LCFTPT Trigger: TGTGGGGGTGAAACACAGGCAAAAATGAATGTACTC...ATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGCCCAGGACACCTGCTTCTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTGAGGGTTCGAGCAGTGAGTCGCAATCCCCTTCATGGTATGCTTCCTTACAGGTGACACAATACAAGTaGAAACAGTCCAAACAGATC | + |
|
Preference number: 2 (lower is better) Translates to: PEGSSSESQSPSWYASLQVTQYK*KQSKQI Trigger: GATCTGTTTGGACTGTTTCCACTTGTATTGTGTCAC...CTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGAACCCTCAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR-3UTR TCA 90 bp | TACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATGCGATTACGTCACTCTCAAGTGTGCTTCTaGGAATCCTCAGAGGTGTTA | + |
|
Preference number: 2 (lower is better) Translates to: YPKQNSKHCPGFPMRLRHSQVCF*ESSEVL Trigger: TAACACCTCTGAGGATTCTCAGAAGCACACTTGAGA...GTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR GCA 90 bp | ATAGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATGATTACTACATGAGAGTGGTTTTCTGTGGGTaGCCTGGAAAGGATCTAGGG | + |
|
Preference number: 2 (lower is better) Translates to: IVLTTAGGPLGIDDYYMRVVFCG*PGKDLG Trigger: CCCTAGATCCTTTCCAGGGCACCCACAGAAAACCAC...TCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACTACTTACCCAGGGCGTaGCAACAACCCTGGAAAACA | + |
|
Preference number: 2 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHYLPRA*QQPWKT Trigger: TGTTTTCCAGGGTTGTTGCCACGCCCTGGGTAAGTA...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTCAGAAGTTGTGCCTCCCTCACACAGCTCCTTCCTTCAAGATTCTTCAAGCCTTTGTCATTCTTGCTTaGGGTGCAGTAAACTTTGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQKLCLPHTAPSFKILQAFVILA*GAVNFE Trigger: CTCAAAGTTTACTGCACCTCAAGCAAGAATGACAAA...GGCTTGAAGAATCTTGAAGGAAGGAGCTGTGTGAGGGAGGCACAACTTCTGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR-3UTR TCA 90 bp | GCTCCTTCTATAAACATTGTGTTTCTTGACCCTGTTGTTAGCATTGGCGCAGCACCCTTTGGGAATAGATaGTTACTACATGAGAGCAGC | + |
|
Preference number: 2 (lower is better) Translates to: APSINIVFLDPVVSIGAAPFGNR*LLHESS Trigger: GCTGCTCTCATGTAGTAATCATCTATTCCCAAAGGG...TGCTGCGCCAATGCTAACAACAGGGTCAAGAAACACAATGTTTATAGAAGGAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR TCA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACGAGTGTGATGCATGTTaGTCTGAAGGCTATCTTGGT | + |
|
Preference number: 2 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHECDAC*SEGYLG Trigger: ACCAAGATAGCCTTCAGATCAACATGCATCACACTC...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR GCA 90 bp | TACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATGCGATTACGTCACGTGTGCGCATTTATGTaGTTATATGCATCGAGAAGA | + |
|
Preference number: 2 (lower is better) Translates to: YPKQNSKHCPGFPMRLRHVCAFM*LYASRR Trigger: TCTTCTCGATGCATATAAGCACATAAATGCGCACAC...GTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CCA 90 bp | GTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGAATCGAAAAGGGACCATACTaGAGAGCCACAGAGCTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: VIHAHTLWMPVFWVILRIEKGPY*RATELQ Trigger: CTGAAGCTCTGTGGCTCTCCAGTATGGTCCCTTTTC...GATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CAA 90 bp | CATTTCTTTCTAAAGTTGCAGATAATGAAACGAACGGAAGTAGGTTaGGCTTCTGAGTCCTCCCTGCGATTTAAGCAGTCTGCCATCCAA | + |
|
Preference number: 2 (lower is better) Translates to: HFFLKLQIMKRTEVG*ASESSLRFKQSAIQ Trigger: TTGGATGGCAGACTGCTTAAATCGCAGGGAGGACTCAGAAGCCAAACCTACTTCCGTTCGTTTCATTATCTGCAACTTTAGAAAGAAATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CCA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACATTGGCGCAGCATCATaGGATTGTCTCTTAAAAACG | + |
|
Preference number: 2 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHIGAAS*DCLLKT Trigger: CGTTTTTAAGAGACAATCCCATGATGCTGCGCCAAT...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CCA 90 bp | TATTCACTCATGGGCTTTGCCCATAGAAAGGCTTTTCACTTCACTTTGCTATCAAAATTTGTTCAGGGCTaGAGAGATGGCTCAGGGATT | + |
|
Preference number: 2 (lower is better) Translates to: YSLMGFAHRKAFHFTLLSKFVQG*RDGSGI Trigger: AATCCCTGAGCCATCTCTCCAGCCCTGAACAAATTT...TGATAGCAAAGTGAAGTGAAAAGCCTTTCTATGGGCAAAGCCCATGAGTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| 3UTR-3UTR GCA 90 bp | AACCGAGTGAACAAAGTCAACCTAACATACCAGGATATTAAGAAATTTGTTCAGAGAGGACCTGATTTCTaGTCCCAGCCTCACAGTTAC | + |
|
Preference number: 2 (lower is better) Translates to: NRVNKVNLTYQDIKKFVQRGPDF*SQPHSY Trigger: GTAACTGTGAGGCTGGGAGCAGAAATCAGGTCCTCT...CTGAACAAATTTCTTAATATCCTGGTATGTTAGGTTGACTTTGTTCACTCGGTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| 3UTR-3UTR GCA 90 bp | ATAGAAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAAGGTATGCTTAGAACTTTCTGTTCTTaGAGAGGACCTGATTTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: IERLFTSLCYHRHTQGMLRTFCS*RGPDFC Trigger: GCAGAAATCAGGTCCTCTGCAAGAACAGAAAGTTCT...AAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTCTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| 3UTR-3UTR CCA 90 bp | TTCTTAATACACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTTGATTTCCCAGCAAACATTGTCCTaGCTTCCCAATGCGATTACG | + |
|
Preference number: 2 (lower is better) Translates to: FLIHFTERERLLCRGLISQQTLS*LPNAIT Trigger: CGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTG...GGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTATTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CAA 90 bp | TTCTTAATACACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTaGATTTCCACTCTTCTGACATCCACTTTTATCCCACTATTCACA | + |
|
Preference number: 2 (lower is better) Translates to: FLIHFTERERLLCRG*ISTLLTSTFIPLFT Trigger: TGTGAATAGTGGGATAAAAGTGGATGTCAGAAGAGTGGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTATTAAGAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CCA 72 bp | TCGAGTGAGCCAGAGGCTGAAAGTGCCTCCTCCCCCTaGGGCCAGCGGGTGCTGTGGTTTTCTGTGGGTGCC | + |
|
Preference number: 3 (lower is better) Translates to: SSEPEAESASSP*GQRVLWFSVGA Trigger: GGCACCCACAGAAAACCACAGCACCCGCTGGCCCCAGGGGGAGGAGGCACTTTCAGCCTCTGGCTCACTCGA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR TCA 72 bp | CAAACCCGCAGCCCAGGCCGTTGCCCCCTTCGCAGGTaGCTTTCCTCTGGCCCTGTTCAGGTAGCAGTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: QTRSPGRCPLRR*LSSGPVQVAVQ Trigger: CTGGACTGCTACCTGAACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGGGTTTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR GCA 72 bp | CCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTaGAGCACGCATTCCTCGGCCCCATACTGCTGGTAC | + |
|
Preference number: 3 (lower is better) Translates to: PQPGRGHSTPPI*STHSSAPYCWY Trigger: GTACCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR CCA 72 bp | CCCAGGCCGTTGCCCCCTTCGCAGGTGACTTTCCTCTaGCCCTGTTCAGGTAGCAGTCCAGCTCCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: PRPLPPSQVTFL*PCSGSSPAPQP Trigger: TGGCTGTGGAGCTGGACTGCTACCTGAACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR CCA 72 bp | GTGTGTATTGCCCTGTCTGTAGGACCACTGGGTGGATaGGGCTCCCTGGGGCTTAACAGCAGAGGAGGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: VCIALSVGPLGG*GSLGLNSRGGS Trigger: GCTCCCTCCTCTGCTGTTAAGCCCCAGGGAGCCCCATCCACCCAGTGGTCCTACAGACAGGGCAATACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR TCA 72 bp | GACGGTGGTTACACTGGAAGACCAGGACAGGGCTCCTaGCATCTGTGCACGCTATGCAAGGGATGCTGCGCC | + |
|
Preference number: 3 (lower is better) Translates to: DGGYTGRPGQGS*HLCTLCKGCCA Trigger: GGCGCAGCATCCCTTGCATAGCGTGCACAGATGTCAGGAGCCCTGTCCTGGTCTTCCAGTGTAACCACCGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| 3UTR-3UTR CAA 90 bp | CCACCCTGTAGGCCTGAGAAGTGGCTCCTGAGGGTTCGAGCAGTGAGTCGCAATTCTTTAATCAGGGAGTaGGGACAGCCAGCTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: PPCRPEKWLLRVRAVSRNSLIRE*GQPATH Trigger: GTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGA...ATTGCGACTCACTGCTCGAACCCTCAGGAGCCACTTCTCAGGCCTACAGGGTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR TCA 72 bp | TGCACGCTATGCAAGGGATGCTGCGCCTGTTGCTGGTaGTCAGGTTCAAAGCTACCGACGTGTCCTTGTCTG | + |
|
Preference number: 3 (lower is better) Translates to: CTLCKGCCACCW*SGSKLPTCPCL Trigger: CAGACAAGGACACGTCGGTAGCTTTGAACCTGATCACCAGCAACAGGCGCAGCATCCCTTGCATAGCGTGCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| 3UTR TCA 72 bp | GGGCCAAGTGACATCTCTCTCTACACGTCAAACCAGTaGTCTCCCATGCAGGCTCGGTTCCACTCACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: GPSDISLYTSNQ*SPMQARFHSQP Trigger: TGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAGATGTCACTTGGCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR CCA 72 bp | GAGGGAGCAGATATGCAGAGGTGTCCCCACTTGTGGTaGAAGGGGTCAGGCATACTCTCATTCAGATGGTCG | + |
|
Preference number: 3 (lower is better) Translates to: EGADMQRCPHLW*KGSGILSFRWS Trigger: CGACCATCTGAATGAGAGTATGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | TGCGATTACGTCACACGGGTGTGGAAGGAGGCAGAGGCAAGCACAATGATGGAAGGTGGTCTTTTCATTTaGGGAGCTGGCTGGGTGGAG | + |
|
Preference number: 3 (lower is better) Translates to: CDYVTRVWKEAEASTMMEGGLFI*GAGWVE Trigger: CTCCACCCAGCCAGCTCCCAAAATGAAAAGACCACC...TTCCATCATTGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | CATCTCTCTCTACACGTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCGGGATGCTGCGCCTGTaGCTGGTGATCAGGTTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: HLSLHVKPVISHAGSVPLGMLRL*LVIRFK Trigger: TTTGAACCTGATCACCAGCAACAGGCGCAGCATCCC...GAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAAACAAACCCGCAGCCCAGGCCGTTGCCCCCTTCGCAGGTGACTTTCCTCTGACAAACTGCCGATCGTaGAGTCTTGTGACACAATAC | + |
|
Preference number: 3 (lower is better) Translates to: ENKPAAQAVAPFAGDFPLTNCRS*SLVTQY Trigger: GTATTGTGTCACAAGACTCAACGATCGGCAGTTTGT...CAGAGGAAAGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGGGTTTGTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR GCA 72 bp | GGTTTTCTGTGGGTGCCCTGGAAAGGATCTAGGGGCTaGTTCTGTAATCTGCAGCCTGTGTTTGTGTGTGCG | + |
|
Preference number: 3 (lower is better) Translates to: GFLWVPWKGSRG*FCNLQPVFVCA Trigger: CGCACACACAAACACAGGCTGCAGATTACAGAAGCAGCCCCTAGATCCTTTCCAGGGCACCCACAGAAAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR GCA 72 bp | ACATCTCTCTCTACACGTCAAACCAGTGATCTCCCATaGAGGCTCGGTTCCACTCACAGCCACAGTTCCAGC | + |
|
Preference number: 3 (lower is better) Translates to: TSLSTRQTSDLP*RLGSTHSHSSS Trigger: GCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAGATGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAAGCAGGTGTCCTGGGCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATGAAGTGCAAGCCCACTaGACAAATGAGCTCCCGGAG | + |
|
Preference number: 3 (lower is better) Translates to: EKQVSWASSRFYREEGENEVQAH*TNELPE Trigger: CTCCGGGAGCTCATTTGTCAAGTGGGCTTGCACTTC...ATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGCCCAGGACACCTGCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR GCA 72 bp | CATGTTGATCTGAAGGCTATCTTGGTGTGTGTGTATTaGCCTGTCTGTAGGACCACTGGGTGGATGGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HVDLKAILVCVY*PVCRTTGWMGL Trigger: GAGCCCCATCCACCCAGTGGTCCTACAGACAGGGCAATACACACACACCAAGATAGCCTTCAGATCAACATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR GCA 72 bp | CAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATaGGATTACGTCACACGGGTGTGGAAGGAGGCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QSRTANIVLASQ*DYVTRVWKEAE Trigger: CTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CCA 72 bp | CAGAGGTGTTACTTACCCAGGGCGTGGCAACAACCCTaGAAAACACTTCCCACCTCACTCATGGCTTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: QRCYLPRAWQQP*KTLPTSLMAST Trigger: TGTAGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGGTAAGTAACACCTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CCA 72 bp | TCTGAGAATCCTCAGAGGTGTTACTTACCCAGGGCGTaGCAACAACCCTGGAAAACACTTCCCACCTCACTC | + |
|
Preference number: 3 (lower is better) Translates to: SENPQRCYLPRA*QQPWKTLPTSL Trigger: GAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGGTAAGTAACACCTCTGAGGATTCTCAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CCA 72 bp | GTCCTGGCTTCCCAATGCGATTACGTCACACGGGTGTaGAAGGAGGCAGAGGCAAGCACAATGATGGAAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VLASQCDYVTRV*KEAEASTMMEK Trigger: TTTTTCCATCATTGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCATTGGGAAGCCAGGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | CTCTCTCTACACGTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACATCTTTAATCAGGGAGTaGGGACAGCCAGCTACACAC | + |
|
Preference number: 3 (lower is better) Translates to: LSLHVKPVISHAGSVPLTSLIRE*GQPATH Trigger: GTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGA...TGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR-3UTR CAA 90 bp | CACCCTCATCTAAGCTCTGACATTCGAGTGAGCCAGAGGCTGAAAGTGCCTCCTATCTGCAGCCTGTGTTaGTGTGTGCGCATTTATGTG | + |
|
Preference number: 3 (lower is better) Translates to: HPHLSSDIRVSQRLKVPPICSLC*CVRIYV Trigger: CACATAAATGCGCACACACAAACACAGGCTGCAGAT...AGGAGGCACTTTCAGCCTCTGGCTCACTCGAATGTCAGAGCTTAGATGAGGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CCA 72 bp | GTCCCTTTACCCAAAGCAGAACAGCAAACATTGTCCTaGCTTCCCAATGCGATTACGTCACACGGGTGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: VPLPKAEQQTLS*LPNAITSHGCG Trigger: TCCACACCCGTGTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTAAAGGGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | CTTCAGAAGTTGTGCCTCCCTCACACAGCTCCTTCCTTCAAGATTCTTCAAGCCCCTCCCATCGGATCTTaGTCATTCTTGCTTGAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: LQKLCLPHTAPSFKILQAPPIGS*SFLLEV Trigger: CACCTCAAGCAAGAATGACAAAGATCCGATGGGAGG...GGCTTGAAGAATCTTGAAGGAAGGAGCTGTGTGAGGGAGGCACAACTTCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR-3UTR CAA 90 bp | CGCAGCATCATGGGATTGTCTCTTAAAAACGCCCCCTTTATAGGCACTTTCTCTCGAACGGAAGTAGGTTaGGCTTCTGAGTCCTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: RSIMGLSLKNAPFIGTFSRTEVG*ASESSL Trigger: CAGGGAGGACTCAGAAGCCAAACCTACTTCCGTTCG...AGAGAAAGTGCCTATAAAGGGGGCGTTTTTAAGAGACAATCCCATGATGCTGCG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR TCA 72 bp | ACACAATACAAGTGGAAACAGTCCAAACAGATCACGTaGCGGTGGTTACACTGGAAGACCAGGACAGGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: TQYKWKQSKQIT*RWLHWKTRTGL Trigger: GAGCCCTGTCCTGGTCTTCCAGTGTAACCACCGTCACGTGATCTGTTTGGACTGTTTCCACTTGTATTGTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| 3UTR CCA 72 bp | ACATATGCATCTGTTAGGAAGGAAAAGGGACCATACTaGAGAGCCACAGAGCTTCAGGGAGTCCCTTTACCC | + |
|
Preference number: 3 (lower is better) Translates to: TYASVRKEKGPY*RATELQGVPLP Trigger: GGGTAAAGGGACTCCCTGAAGCTCTGTGGCTCTCCAGTATGGTCCCTTTTCCTTCCTAACAGATGCATATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | CCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACACTGTGGACTCCTGACTGCTGCTaGACAGGTGGTCTTTTCATT | + |
|
Preference number: 3 (lower is better) Translates to: PTIHTHTMQAVIHAHTLWTPDCC*TGGLFI Trigger: AATGAAAAGACCACCTGTCAAGCAGCAGTCAGGAGT...CCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | TCCAAGGATCCTGAAGTGATGGAGCTCTTTAATCAGGGAGTTGGGACAGCCAGCACAAACTGCCGATCGTaGAGTCTTGTGACACAATAC | + |
|
Preference number: 3 (lower is better) Translates to: SKDPEVMELFNQGVGTASTNCRS*SLVTQY Trigger: GTATTGTGTCACAAGACTCAACGATCGGCAGTTTGT...GCTGGCTGTCCCAACTCCCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR TCA 72 bp | AGAGATGCCTCCCATCGGATCTTTGTCATTCTTGCTTaGGGTGCAGTAAACTTTGAGGAACCAGCTGGTAGG | + |
|
Preference number: 3 (lower is better) Translates to: RDASHRIFVILA*GAVNFEEPAGR Trigger: CCTACCAGCTGGTTCCTCAAAGTTTACTGCACCTCAAGCAAGAATGACAAAGATCCGATGGGAGGCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR TCA 72 bp | TACCTAGTGTACTGCTCTTCTCCAAGGATCCTGAAGTaGTGGAGCTCTTTAATCAGGGAGTTGGGACAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: YLVYCSSPRILK*WSSLIRELGQP Trigger: TGGCTGTCCCAACTCCCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGGAGAAGAGCAGTACACTAGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR GCA 72 bp | AGAGATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTaGAGAGGACCTGATTTCTGCTCCCAGCCTCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: RDGSGIKRTFCS*RGPDFCSQPHS Trigger: ACTGTGAGGCTGGGAGCAGAAATCAGGTCCTCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATCTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| 3UTR CCA 72 bp | AATTGTAATTCCTGGACTTGGGAGACAGGACGGGAGTaGGGGGTCAAAAGTTCAAGGTCATCATCCTACATG | + |
|
Preference number: 3 (lower is better) Translates to: NCNSWTWETGRE*GVKSSRSSSYM Trigger: CATGTAGGATGATGACCTTGAACTTTTGACCCCCCACTCCCGTCCTGTCTCCCAAGTCCAGGAATTACAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR TCA 72 bp | AGAAAATTGCTTTCTTTGTGGAAGTGCAAGCCCACTTaGCAAATGAGCTCCCGGAGGGCTTCAGAAGTTGTG | + |
|
Preference number: 3 (lower is better) Translates to: RKLLSLWKCKPT*QMSSRRASEVV Trigger: CACAACTTCTGAAGCCCTCCGGGAGCTCATTTGTCAAGTGGGCTTGCACTTCCACAAAGAAAGCAATTTTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR TCA 72 bp | AGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATaGTTACTACATGAGAGCAGCGTTCCTCAGATCTCA | + |
|
Preference number: 3 (lower is better) Translates to: SFDYCRGPFGNR*LLHESSVPQIS Trigger: TGAGATCTGAGGAACGCTGCTCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGGATCTGAAGGCTATCTaGGTGTGTGTGTATTGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCDSCSHTVDACLLGYFKDLKAI*VCVYCP Trigger: AGGGCAATACACACACACCAAGATAGCCTTCAGATC...CTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCACAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR GCA 72 bp | GCTAGCTCCCGTTTCTACAGAGAGGAAGGAGAAAATTaGTTTCTTTGTGGAAGTGCAAGCCCACTTGACAAA | + |
|
Preference number: 3 (lower is better) Translates to: ASSRFYREEGEN*FLCGSASPLDK Trigger: TTTGTCAAGTGGGCTTGCACTTCCACAAAGAAAGCAATTTTCTCCTTCCTCTCTGTAGAAACGGGAGCTAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR GCA 72 bp | CACTATTCACACTCACACAATGCAGGCTGTGATTCATaGTCACACACTGTGGATGCCTGTCTTTTGGGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: HYSHSHNAGCDS*SHTVDACLLGY Trigger: ATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | GTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGAATCACTGCAGGGGGCCCTTaGGGAATAGATGATTACTAC | + |
|
Preference number: 3 (lower is better) Translates to: VIHAHTLWMPVFWVILRITAGGP*GIDDYY Trigger: GTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGT...GATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR-3UTR CAA 90 bp | GGCTGTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGGATAAACAAATAGTTTaGACTACTGCAGGGGGCCCT | + |
|
Preference number: 3 (lower is better) Translates to: GCDSCSHTVDACLLGYFKDKQIV*TTAGGP Trigger: AGGGCCCCCTGCAGTAGTCAAAACTATTTGTTTATC...CTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCACAGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR TCA 72 bp | TTTTTAGTGTGTTCAGAATATAAGCTTCCATACAGATaGGTGGGTCAGAGCCTCACATGTCCCTGCCAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FLVCSEYKLPYR*VGQSLTCPCQR Trigger: TCTCTGGCAGGGACATGTGAGGCTCTGACCCACTCATCTGTATGGAAGCTTATATTCTGAACACACTAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR TCA 72 bp | TTTATCCCACTATTCACACTCACACAATGCAGGCTGTaGTTCATGCTCACACACTGTGGATGCCTGTCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: FIPLFTLTQCRL*FMLTHCGCLSF Trigger: AAAAGACAGGCATCCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR TCA 72 bp | CAGAGAACTCCAGGCCTGGATGTTTCTCTTCACTTCTaGATTCAATCAGACAGTTACAGACAAACAGCATCT | + |
|
Preference number: 3 (lower is better) Translates to: QRTPGLDVSLHF*IQSDSYRQTAS Trigger: AGATGCTGTTTGTCTGTAACTGTCTGATTGAATTCAGAAGTGAAGAGAAACATCCAGGCCTGGAGTTCTCTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233782.2 |
||
| 3UTR CCA 72 bp | CGCATTTATGTGCTTATATGCATCGAGAAGAAGAAATaGCTAAGGAAGGTAGGAATCTTCGGAGTTTCCCTT | + |
|
Preference number: 3 (lower is better) Translates to: RIYVLICIEKKK*LRKVGIFGVSL Trigger: AAGGGAAACTCCGAAGATTCCTACCTTCCTTAGCCATTTCTTCTTCTCGATGCATATAAGCACATAAATGCG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CCA 90 bp | GGGCACAGCACACCTCCCATTTGCAGCACGCATTCCTCGGCCCCATACTGCTGGACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: GHSTPPICSTHSSAPYCWTQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...CCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGCAGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SGSSPAPQPGRGHSTPPITQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...AATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACTGCTACCTGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| 3UTR CAA 72 bp | TCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTaGCAGCACGCATTCCTCGGCCCCATACTGCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: STARTGAQHTSH*QHAFLGPILLV Trigger: TACCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | TCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGCACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPMQARFHSQPQFQHHSSTQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...GCTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | GTTCAGGTAGCAGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATCCTGGACTCCCATATaGAGCCCTCTGAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: VQVAVQLHSQDGGTAHLPSWTPI*SPLRCS Trigger: AGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGA...TGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACTGCTACCTGAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR CCA 90 bp | GCTCTGGTTCCAGGGCAGTCTGGAGACTGGCACTCACCACTCATCCGGTTTGGACGGAGCTTTCCAGGCTaGACCTTGTGGCAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ALVPGQSGDWHSPLIRFGRSFPG*TLWQGP Trigger: AGGCCCCTGCCACAAGGTCCAGCCTGGAAAGCTCCG...TCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCAGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| CDS-3UTR GCA 90 bp | AGCTCTGACATTCGAGTGAGCCAGAGGCTGAAAGTGCCTCCTCCCCCTGGGGCCGGCCAAGGTGAGGGTTaGTTGTTTGCAGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SSDIRVSQRLKVPPPPGAGQGEG*LFAGAT Trigger: TGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCC...GGCCCCAGGGGGAGGAGGCACTTTCAGCCTCTGGCTCACTCGAATGTCAGAGCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CCA 90 bp | CTCTTTTGTCCACCCTGTAGGCCTGAGAAGTGGCTCCTGAGGGTTCGAGCAGTGCGGAGCTTTCCAGGCTaGACCTTGTGGCAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LFCPPCRPEKWLLRVRAVRSFPG*TLWQGP Trigger: AGGCCCCTGCCACAAGGTCCAGCCTGGAAAGCTCCG...CACTGCTCGAACCCTCAGGAGCCACTTCTCAGGCCTACAGGGTGGACAAAAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | GATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAATCGTCCCAGCAAGATaGGCCCTGGGCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPCRLGSTHSHSSSTTPIVPAR*ALGQGE Trigger: CTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGAT...TGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | GATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGACAGGGCTCAGCTCTaGTTCCAGGGCAGTCTGGAG | + |
|
Preference number: 4 (lower is better) Translates to: DLPCRLGSTHSHSSSTTPDRAQL*FQGSLE Trigger: CTCCAGACTGCCCTGGAACCAGAGCTGAGCCCTGTC...TGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR TCA 90 bp | GAGTGGGTCAGAGCCTCACATGTCCCTGCCAGAGATGCCTCCCATCGGATCTTTTGCCCCCTTCGCAGGTaGCTTTCCTCTGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: EWVRASHVPARDASHRIFCPLRR*LSSGPV Trigger: AACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCA...AAAGATCCGATGGGAGGCATCTCTGGCAGGGACATGTGAGGCTCTGACCCACTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| CDS-3UTR CCA 90 bp | TCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTGCAGCACGCAAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSSTARTGAQHTSHLQHARIDLH*EAIAGV Trigger: AACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCT...TGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | CAGCACGCATTCCTCGGCCCCATACTGCTGGTACCTAGTGTACTGCTCTTCTCCACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QHAFLGPILLVPSVLLFSTQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...GGAGAAGAGCAGTACACTAGGTACCAGCAGTATGGGGCCGAGGAATGCGTGCTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTGCAGCACGCATTCAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SSTARTGAQHTSHLQHAFKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...GAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGTAGCAGTCCAGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SGSSPAPQPGRGHSTPPIKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...AATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCTGGACTGCTACCTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | TGGAGGCCTCCTCCCAGCGAGCTTGCTCAGCGGCTCTTTTGTCCACCCTGTAGGAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WRPPPSELAQRLFCPPCRKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...CCTACAGGGTGGACAAAAGAGCCGCTGAGCAAGCTCGCTGGGAGGAGGCCTCCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | AGGCCTGAGAAGTGGCTCCTGAGGGTTCGAGCAGTGAGTCGCAATCCCCTTCATATCGTCCCAGCAAGATaGGCCCTGGGCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: RPEKWLLRVRAVSRNPLHIVPAR*ALGQGE Trigger: CTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGAT...ATGAAGGGGATTGCGACTCACTGCTCGAACCCTCAGGAGCCACTTCTCAGGCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCACCATATGGAGCCCTCTaGGGTGCTCTGGGGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: VKPVISHAGSVPLTATVPPYGAL*GALGFV Trigger: GACGAACCCCAGAGCACCTCAGAGGGCTCCATATGG...TGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR GCA 90 bp | CAGCACACCTCCCATTTGCAGCACGCATTCCTCGGCCCCATACTGCTGGTACCTGGCCAAGGTGAGGGTTaGTTGTTTGCAGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QHTSHLQHAFLGPILLVPGQGEG*LFAGAT Trigger: TGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCC...AGGTACCAGCAGTATGGGGCCGAGGAATGCGTGCTGCAAATGGGAGGTGTGCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | AGCTCCACAGCCAGGACGGGGGCACAGCACACCTCCCATTTGCAGCACGCATTCAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTARTGAQHTSHLQHAFRIDLH*EAIAGV Trigger: AACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCT...GAATGCGTGCTGCAAATGGGAGGTGTGCTGTGCCCCCGTCCTGGCTGTGGAGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CCA 90 bp | AGGAGGGAGCAGATATGCAGAGGTGTCCCCACTTGTGGTGGAAGGGGTCAGGCATCCTGGACTCCCATATaGAGCCCTCTGAGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RREQICRGVPTCGGRGQASWTPI*SPLRCS Trigger: AGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGA...TGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR TCA 90 bp | ACTCCAGCTTGCACTGGGGCTGAGGACACTTCATGTGCATACATCCTCCGTTTTGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TPACTGAEDTSCAYILRFGPGPR*GLLVCR Trigger: CCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCC...AAAACGGAGGATGTATGCACATGAAGTGTCCTCAGCCCCAGTGCAAGCTGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR TCA 90 bp | TCCAAGGATCCTGAAGTGATGGAGCTCTTTAATCAGGGAGTTGGGACAGCCAGCGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SKDPEVMELFNQGVGTASGPGPR*GLLVCR Trigger: CCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCC...GCTGGCTGTCCCAACTCCCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR GCA 90 bp | CCTCCTCCCAGCGAGCTTGCTCAGCGGCTCTTTTGTCCACCCTGTAGGCCTGAGACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: PPPSELAQRLFCPPCRPETTSLS*KMLVSE Trigger: TTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGT...CTCAGGCCTACAGGGTGGACAAAAGAGCCGCTGAGCAAGCTCGCTGGGAGGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGCGGCTCTTTTGTCCACCCTGTAGGCCTGAGAAGTGGCTCCTGAGGGTTGTAGGTGGGTTTAACTaGTGGACCTCTGGCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQRLFCPPCRPEKWLLRVVGGFN*WTSGCF Trigger: GAAGCAGCCAGAGGTCCAGCAGTTAAACCCACCTAC...AACCCTCAGGAGCCACTTCTCAGGCCTACAGGGTGGACAAAAGAGCCGCTGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR CCA 90 bp | TGCGATTACGTCACACGGGTGTGGAAGGAGGCAGAGGCAAGCACAATGATGGAAGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: CDYVTRVWKEAEASTMMEGQSGD*HSPLIR Trigger: CCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCC...TTCCATCATTGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 72 bp | ACTCCTGACTGCTGCTTGACAGGTGGTCTTTTCATTTaGGGAGCTGGCTGGGTGGAGTCTAGGGCCACTGGG | + |
|
Preference number: 4 (lower is better) Translates to: TPDCCLTGGLFI*GAGWVESRATG Trigger: CCCAGTGGCCCTAGACTCCACCCAGCCAGCTCCCAAAATGAAAAGACCACCTGTCAAGCAGCAGTCAGGAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 72 bp | GGGACAGCCAGCTACACACGGCAGGGAGTAGCCAAGTaGAGCATCGTGGACAAACTGCCGATCGTTGAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTASYTRQGVAK*SIVDKLPIVES Trigger: AGACTCAACGATCGGCAGTTTGTCCACGATGCTCAACTTGGCTACTCCCTGCCGTGTGTAGCTGGCTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR GCA 90 bp | GTTCGAGCAGTGAGTCGCAATCCCCTTCATGGTATGCTTCCTTACAGTCCCGGCGGCCAAGGTGAGGGTTaGTTGTTTGCAGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: VRAVSRNPLHGMLPYSPGGQGEG*LFAGAT Trigger: TGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCC...GCCGGGACTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
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| CDS-3UTR CCA 90 bp | GAGCTTGCTCAGCGGCTCTTTTGTCCACCCTGTAGGCCTGAGAAGTGGCTCCTGAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ELAQRLFCPPCRPEKWLLRIDLH*EAIAGV Trigger: AACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCT...CAGGAGCCACTTCTCAGGCCTACAGGGTGGACAAAAGAGCCGCTGAGCAAGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR CCA 90 bp | CCCAGGGCGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PRAWQQPWKTLPTSLMASKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...AGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CCA 90 bp | CGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTACAGAATCGGAGCTTTCCAGGCTaGACCTTGTGGCAGGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RGNNPGKHFPPHSWLLQNRSFPG*TLWQGP Trigger: AGGCCCCTGCCACAAGGTCCAGCCTGGAAAGCTCCG...ATTCTGTAGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 72 bp | ACATCTGTGCACGCTATGCAAGGGATGCTGCGCCTGTaGCTGGTGATCAGGTTCAAAGCTACCGACGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TSVHAMQGMLRL*LVIRFKATDVS Trigger: GGACACGTCGGTAGCTTTGAACCTGATCACCAGCAACAGGCGCAGCATCCCTTGCATAGCGTGCACAGATGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
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| CDS-3UTR TCA 90 bp | ATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGGATGCATTTGTTTCATaGCTTCTCCTCCGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISHAGSVPLTATVPAPLQDAFVS*LLLRGL Trigger: GAGACCACGGAGGAGAAGTCATGAAACAAATGCATC...CTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
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| CDS-3UTR TCA 90 bp | CCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACACTGTGGCCATATGGAGCCCTCTaGGGTGCTCTGGGGTTCGTC | + |
|
Preference number: 4 (lower is better) Translates to: PTIHTHTMQAVIHAHTLWPYGAL*GALGFV Trigger: GACGAACCCCAGAGCACCTCAGAGGGCTCCATATGG...CCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR TCA 90 bp | CGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTACAGAATTGCCCCCTTCGCAGGTaGCTTTCCTCTGGCCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RGNNPGKHFPPHSWLLQNCPLRR*LSSGPV Trigger: AACAGGGCCAGAGGAAAGTCACCTGCGAAGGGGGCA...ATTCTGTAGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR GCA 90 bp | ATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ISHAGSVPLTATVPAPLQTTSLS*KMLVSE Trigger: TTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGT...CTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR GCA 90 bp | ACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: TSDLPCRLGSTHSHSSSTTTSLS*KMLVSE Trigger: TTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGT...GGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR GCA 90 bp | CACCCTCATCTAAGCTCTGACATTCGAGTGAGCCAGAGGCTGAAAGTGCCTCCTACCAGTGATCTCCCATaGAGGCTCGGTTCCACTCAC | + |
|
Preference number: 4 (lower is better) Translates to: HPHLSSDIRVSQRLKVPPTSDLP*RLGSTH Trigger: GTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGT...AGGAGGCACTTTCAGCCTCTGGCTCACTCGAATGTCAGAGCTTAGATGAGGGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CCA 90 bp | ATGGAGCTCTTTAATCAGGGAGTTGGGACAGCCAGCTACACACGGCAGGGAGTAAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: MELFNQGVGTASYTRQGVKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...TACTCCCTGCCGTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGAGCTCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR CCA 90 bp | AGAGAACTTTCTGTTCTTGCAGAGGACCTGATTTCTGCTCCCAGCCTCACAGTTGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: RELSVLAEDLISAPSLTVGQSGD*HSPLIR Trigger: CCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCC...AACTGTGAGGCTGGGAGCAGAAATCAGGTCCTCTGCAAGAACAGAAAGTTCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR CCA 90 bp | TTTTTCAATTGGCACGTTGCAGCGAGGACAAGGCTTGGTGGTCTTCTTGATGGTGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGG | + |
|
Preference number: 4 (lower is better) Translates to: FFNWHVAARTRLGGLLDGGQSGD*HSPLIR Trigger: CCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCC...ACCATCAAGAAGACCACCAAGCCTTGTCCTCGCTGCAACGTGCCAATTGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
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| 3UTR CAA 72 bp | CAGGGAGTCCCTTTACCCAAAGCAGAACAGCAAACATaGTCCTGGCTTCCCAATGCGATTACGTCACACGGG | + |
|
Preference number: 4 (lower is better) Translates to: QGVPLPKAEQQT*SWLPNAITSHG Trigger: CCCGTGTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTAAAGGGACTCCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR TCA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHGPGPR*GLLVCR Trigger: CCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCC...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR TCA 90 bp | AGCCACAGAGCTTCAGGGAGTCCCTTTACCCAAAGCAGAACAGCAAACATTGTCTGCGCCTGTTGCTGGTaGTCAGGTTCAAAGCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: SHRASGSPFTQSRTANIVCACCW*SGSKLP Trigger: CGGTAGCTTTGAACCTGATCACCAGCAACAGGCGCA...GACAATGTTTGCTGTTCTGCTTTGGGTAAAGGGACTCCCTGAAGCTCTGTGGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR GCA 90 bp | ATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGTTCGTCCCCTCCAGATaGATTTGTTTCATGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISHAGSVPLTATVPAPLQFVPSR*ICFMTS Trigger: AGAAGTCATGAAACAAATGCATCTGGAGGGGACGAA...CTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
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| CDS-3UTR GCA 90 bp | TGCGATTACGTCACACGGGTGTGGAAGGAGGCAGAGGCAAGCACAATGATGGAAATCCCCTTCATGGTATaGTTCCTTACAGTCCCGGCA | + |
|
Preference number: 4 (lower is better) Translates to: CDYVTRVWKEAEASTMMEIPFMV*FLTVPA Trigger: TGCCGGGACTGTAAGGAAGCATACCATGAAGGGGAT...TTCCATCATTGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CCA 90 bp | CTCTCTCTACACGTCAAACCAGTGATCTCCCATGCAGGCTCGGTTCCACTCACAAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LSLHVKPVISHAGSVPLTRIDLH*EAIAGV Trigger: AACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCT...TGTGAGTGGAACCGAGCCTGCATGGGAGATCACTGGTTTGACGTGTAGAGAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
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| CDS-3UTR CCA 90 bp | GGAGAGATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTGCAGAGGACCTGATTATCGTCCCAGCAAGATaGGCCCTGGGCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GEMAQGLRELSVLAEDLIIVPAR*ALGQGE Trigger: CTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGAT...AATCAGGTCCTCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATCTCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR TCA 90 bp | GAAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAAGGTATGCTTCATGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: ERLFTSLCYHRHTQGMLHGPGPR*GLLVCR Trigger: CCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCC...ATGAAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR TCA 90 bp | GATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTGCAGAGGACCTGATTTCTGCCGACGTGTCCTTGTCTaGGGTTGGGTGTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: DGSGIKRTFCSCRGPDFCRRVLV*GWVCST Trigger: TGTGGAGCACACCCAACCTCAGACAAGGACACGTCG...GCAGAAATCAGGTCCTCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR TCA 90 bp | GCTCCTTCTATAAACATTGTGTTTCTTGACCCTGTTGTTAGCATTGGCGCAGCACGACGTGTCCTTGTCTaGGGTTGGGTGTGCTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: APSINIVFLDPVVSIGAARRVLV*GWVCST Trigger: TGTGGAGCACACCCAACCTCAGACAAGGACACGTCG...TGCTGCGCCAATGCTAACAACAGGGTCAAGAAACACAATGTTTATAGAAGGAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR GCA 90 bp | AGCCACAGAGCTTCAGGGAGTCCCTTTACCCAAAGCAGAACAGCAAACATTGTCGCATCGTGGACAAACTaGCGATCGTTGAGTCTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: SHRASGSPFTQSRTANIVASWTN*RSLSLV Trigger: CACAAGACTCAACGATCGGCAGTTTGTCCACGATGC...GACAATGTTTGCTGTTCTGCTTTGGGTAAAGGGACTCCCTGAAGCTCTGTGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR GCA 90 bp | GCTCCTTCTATAAACATTGTGTTTCTTGACCCTGTTGTTAGCATTGGCGCAGCAAGCACCACTCCAGCTTaGACTGGGGCTGAGGACACT | + |
|
Preference number: 4 (lower is better) Translates to: APSINIVFLDPVVSIGAASTTPA*TGAEDT Trigger: AGTGTCCTCAGCCCCAGTGCAAGCTGGAGTGGTGCT...TGCTGCGCCAATGCTAACAACAGGGTCAAGAAACACAATGTTTATAGAAGGAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CCA 90 bp | GGCTGCAGTAGGAATACTCCAAACCAAATTGCAGACTTTGTTATCTTTTCAGGGATCGTCCCAGCAAGATaGGCCCTGGGCCAAGGTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GCSRNTPNQIADFVIFSGIVPAR*ALGQGE Trigger: CTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGAT...CCCTGAAAAGATAACAAAGTCTGCAATTTGGTTTGGAGTATTCCTACTGCAGCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR TCA 90 bp | CTTCAGAAGTTGTGCCTCCCTCACACAGCTCCTTCCTTCAAGATTCTTCAAGCCCCAAGGATCCTGAAGTaGTGGAGCTCTTTAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LQKLCLPHTAPSFKILQAPRILK*WSSLIR Trigger: CCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGG...GGCTTGAAGAATCTTGAAGGAAGGAGCTGTGTGAGGGAGGCACAACTTCTGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
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| CDS-3UTR GCA 90 bp | GGCTTTGCCCATAGAAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAGCTTCCGTGGGTACCTaGACTGGTAGTCAGGTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GFAHRKAFHFTLLSQTHPASVGT*TGSQVQ Trigger: TTGTACCTGACTACCAGTGCAGGTACCCACGGAAGC...TGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTCTATGGGCAAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR CCA 90 bp | GTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGAATCACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIHAHTLWMPVFWVILRITQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...GATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CCA 90 bp | CAGGCCTGGATGTTTCTCTTCACTTCTGAATTCAATCAGACAGTTACAGACAAAACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QAWMFLFTSEFNQTVTDKTQLVS*NPLSLS Trigger: GCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGT...TTTGTCTGTAACTGTCTGATTGAATTCAGAAGTGAAGAGAAACATCCAGGCCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233782.2 |
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| CDS-3UTR CCA 90 bp | TACTCTGTTGTTCCAGGTCACAGTTCTGCTGAAGACACTGGATCTTTGAAAGGCAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: YSVVPGHSSAEDTGSLKGKITRS*SAGTPC Trigger: ACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTT...GCCTTTCAAAGATCCAGTGTCTTCAGCAGAACTGTGACCTGGAACAACAGAGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000233782.2 |
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| CDS-3UTR CCA 90 bp | GCTCCTTCTATAAACATTGTGTTTCTTGACCCTGTTGTTAGCATTGGCGCAGCATGTAGGCCTGAGAAGTaGCTCCTGAGGGTTCGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: APSINIVFLDPVVSIGAACRPEK*LLRVRA Trigger: TGCTCGAACCCTCAGGAGCCACTTCTCAGGCCTACA...TGCTGCGCCAATGCTAACAACAGGGTCAAGAAACACAATGTTTATAGAAGGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR TCA 90 bp | CGCAGCATCATGGGATTGTCTCTTAAAAACGCCCCCTTTATAGGCACTTTCTCTACCTCTGGCTGCTTCTaGATCCCTCTTACTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RSIMGLSLKNAPFIGTFSTSGCF*IPLTVC Trigger: ACAGACAGTAAGAGGGATTCAGAAGCAGCCAGAGGT...AGAGAAAGTGCCTATAAAGGGGGCGTTTTTAAGAGACAATCCCATGATGCTGCG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR TCA 90 bp | GGCTGTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGGCTTGGTGGTCTTCTTaGTGGTTTCCTTGGAGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GCDSCSHTVDACLLGYFKAWWSS*WFPWRP Trigger: AGGCCTCCAAGGAAACCATCAAGAAGACCACCAAGC...CTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCACAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR GCA 90 bp | GAAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAAGGTATGCTTCATGGCCAAGGTGAGGGTTaGTTGTTTGCAGGTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: ERLFTSLCYHRHTQGMLHGQGEG*LFAGAT Trigger: TGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCC...ATGAAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR TCA 90 bp | AACTGCCGATCGTTGAGTCTTGTGACACAATACAAGTGGAAACAGTCCAAACAGACCTCTGGCTGCTTCTaGATCCCTCTTACTGTCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NCRSLSLVTQYKWKQSKQTSGCF*IPLTVC Trigger: ACAGACAGTAAGAGGGATTCAGAAGCAGCCAGAGGT...CTGTTTGGACTGTTTCCACTTGTATTGTGTCACAAGACTCAACGATCGGCAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR TCA 90 bp | AAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAAGGTATGCTTCATTTGCGCCTGTTGCTGGTaGTCAGGTTCAAAGCTACCG | + |
|
Preference number: 4 (lower is better) Translates to: KGFSLHFAITDTPKVCFICACCW*SGSKLP Trigger: CGGTAGCTTTGAACCTGATCACCAGCAACAGGCGCA...AATGAAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| CDS-3UTR TCA 90 bp | ATAGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATGATTACTACATGAGAAGCTTGCACTGGGGCTaGGGACACTTCATGTGCATA | + |
|
Preference number: 4 (lower is better) Translates to: IVLTTAGGPLGIDDYYMRSLHWG*GHFMCI Trigger: TATGCACATGAAGTGTCCTCAGCCCCAGTGCAAGCT...TCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACTAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CCA 90 bp | GCTCCTTCTATAAACATTGTGTTTCTTGACCCTGTTGTTAGCATTGGCGCAGCAAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: APSINIVFLDPVVSIGAARIDLH*EAIAGV Trigger: AACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCT...TGCTGCGCCAATGCTAACAACAGGGTCAAGAAACACAATGTTTATAGAAGGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CAA 72 bp | GAGAAAATTGCTTTCTTTGTGGAAGTGCAAGCCCACTaGACAAATGAGCTCCCGGAGGGCTTCAGAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: EKIAFFVEVQAH*TNELPEGFRSC Trigger: ACAACTTCTGAAGCCCTCCGGGAGCTCATTTGTCAAGTGGGCTTGCACTTCCACAAAGAAAGCAATTTTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| 3UTR CAA 72 bp | CACTTGAGTGTGATGCATGTTGATCTGAAGGCTATCTaGGTGTGTGTGTATTGCCCTGTCTGTAGGACCACT | + |
|
Preference number: 4 (lower is better) Translates to: HLSVMHVDLKAI*VCVYCPVCRTT Trigger: AGTGGTCCTACAGACAGGGCAATACACACACACCAAGATAGCCTTCAGATCAACATGCATCACACTCAAGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| 3UTR CAA 72 bp | TTGCTGGTGATCAGGTTCAAAGCTACCGACGTGTCCTaGTCTGAGGTTGGGTGTGCTCCACATTTAAAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: LLVIRFKATDVS*SEVGCAPHLKK Trigger: TTTCTTTAAATGTGGAGCACACCCAACCTCAGACAAGGACACGTCGGTAGCTTTGAACCTGATCACCAGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233634.2 |
||
| CDS-3UTR TCA 90 bp | ATACACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTTGATTTCCACTCTTTGTCTGTGTCCAGAATaGCCGCCAGCCCCACAGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IHFTERERLLCRGLISTLCLCPE*PPAPQS Trigger: ACTCTGTGGGGCTGGCGGTCATTCTGGACACAGACA...AAGAGTGGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR TCA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACCCAAGGATCCTGAAGTaGTGGAGCTCTTTAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHPRILK*WSSLIR Trigger: CCTGATTAAAGAGCTCCATCACTTCAGGATCCTTGG...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATGATTACTACATGAGAACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: IVLTTAGGPLGIDDYYMRTTSLS*KMLVSE Trigger: TTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGT...TCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR GCA 90 bp | GAGAACTCCAGGCCTGGATGTTTCTCTTCACTTCTGAATTCAATCAGACAGTTAACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ENSRPGCFSSLLNSIRQLTTSLS*KMLVSE Trigger: TTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGT...TAACTGTCTGATTGAATTCAGAAGTGAAGAGAAACATCCAGGCCTGGAGTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233782.2 |
||
| 3UTR CAA 72 bp | CAGTCTGCCATCCAATTAGCTTTCCTAGGTTCTCACTaGGTTGATAAGCTGATTAGTACACAGAGGGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QSAIQLAFLGSH*VDKLISTQRGC Trigger: ACAACCCCTCTGTGTACTAATCAGCTTATCAACCAAGTGAGAACCTAGGAAAGCTAATTGGATGGCAGACTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CAA 72 bp | ATGGGCTTTGCCCATAGAAAGGCTTTTCACTTCACTTaGCTATCACAGACACACCCAAGGTATGCTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: MGFAHRKAFHFT*LSQTHPRYASL Trigger: CAATGAAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTCTATGGGCAAAGCCCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| CDS-3UTR CCA 90 bp | CGCAGCATCATGGGATTGTCTCTTAAAAACGCCCCCTTTATAGGCACTTTCTCTGTGACACAATACAAGTaGAAACAGTCCAAACAGATC | + |
|
Preference number: 4 (lower is better) Translates to: RSIMGLSLKNAPFIGTFSVTQYK*KQSKQI Trigger: GATCTGTTTGGACTGTTTCCACTTGTATTGTGTCAC...AGAGAAAGTGCCTATAAAGGGGGCGTTTTTAAGAGACAATCCCATGATGCTGCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR GCA 90 bp | ATAGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATGATTACTACATGAGATTCGTCCCCTCCAGATaGATTTGTTTCATGACTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IVLTTAGGPLGIDDYYMRFVPSR*ICFMTS Trigger: AGAAGTCATGAAACAAATGCATCTGGAGGGGACGAA...TCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR TCA 90 bp | TTCTTAATACACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTTGATTTCCGATGCATTTGTTTCATaGCTTCTCCTCCGTGGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLIHFTERERLLCRGLISDAFVS*LLLRGL Trigger: GAGACCACGGAGGAGAAGTCATGAAACAAATGCATC...GGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTATTAAGAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| 3UTR CAA 72 bp | CACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTaGATTTCCACTCTTCTGACATCCACTTTTATCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HFTERERLLCRG*ISTLLTSTFIP Trigger: TGGGATAAAAGTGGATGTCAGAAGAGTGGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS TCA 90 bp | GGGCCCTGGGCCAAGGTGAGGGTTGCTTGTTTGCAGGTGCCACACTaGACTCGGAGCTTTCCAGGCTGGACCTTGTGGCAGGGGCCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: GPWAKVRVACLQVPH*TRSFPGWTLWQGPL Trigger: CAAAGGCCCCTGCCACAAGGTCCAGCCTGGAAAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS CCA 90 bp | GTGTCCAGAATGACCGCCAGCCCCACAGAGTCCACCGGCAGGGTATaGCTGCTCAGGTCCACTCGTGTCAAGCTCCTGGACTCCCATATG | + |
|
Preference number: 5 (lower is better) Translates to: VSRMTASPTESTGRV*LLRSTRVKLLDSHM Trigger: CATATGGGAGTCCAGGAGCTTGACACGAGTGGACCTGAGCAGCCATACCCTGCCGGTGGACTCTGTGGGGCTGGCGGTCATTCTGGACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
||
| CDS CCA 90 bp | TATGGCTGCTCAGGTCCACTCGTGTCAAGCTCCTGGACTCCCATATaGAGCCCTCTGAGGTGCTCTGGGGTTCGTCCCCTCCAGATGCAT | + |
|
Preference number: 5 (lower is better) Translates to: YGCSGPLVSSSWTPI*SPLRCSGVRPLQMH Trigger: ATGCATCTGGAGGGGACGAACCCCAGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGAGCTTGACACGAGTGGACCTGAGCAGCCATA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
||
| CDS-3UTR CAA 90 bp | CTTCAGAAGTTGTGCCTCCCTCACACAGCTCCTTCCTTCAAGATTCTTCAAGCCCCGCAGCCCAGGCCGTaGCCCCCTTCGCAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: LQKLCLPHTAPSFKILQAPQPRP*PPSQVT Trigger: AGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGG...GGCTTGAAGAATCTTGAAGGAAGGAGCTGTGTGAGGGAGGCACAACTTCTGAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000179624.8 |
||
| CDS-3UTR CAA 90 bp | ATCTCCCATGCAGGCTCGGTTCCACTCACAGCCACAGTTCCAGCACCACTCCAGCAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ISHAGSVPLTATVPAPLQQGEGC*FAGATL Trigger: CAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTG...CTGGAGTGGTGCTGGAACTGTGGCTGTGAGTGGAACCGAGCCTGCATGGGAGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS CCA 90 bp | AGACCAGGACAGGGCTCAGCTCTGGTTCCAGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGGTTTGGAATTAAGACATCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGQGSALVPGQSGD*HSPLIRFGIKTSSQ Trigger: CTGGGACGATGTCTTAATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCAGAGCTGAGCCCTGTCCTGGTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR CAA 90 bp | GAGGGTTCGAGCAGTGAGTCGCAATCCCCTTCATGGTATGCTTCCTTACAGTCCTTTCCAGGCTGGACCTaGTGGCAGGGGCCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: EGSSSESQSPSWYASLQSFPGWT*WQGPLQ Trigger: CTGCAAAGGCCCCTGCCACAAGGTCCAGCCTGGAAA...GGACTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGAACCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | AGGAGGGAGCAGATATGCAGAGGTGTCCCCACTTGTGGTGGAAGGGGTCAGGCACAGGGAGTAGCCAAGTaGAGCATCGTGGACAAACTG | + |
|
Preference number: 5 (lower is better) Translates to: RREQICRGVPTCGGRGQAQGVAK*SIVDKL Trigger: CAGTTTGTCCACGATGCTCAACTTGGCTACTCCCTG...TGCCTGACCCCTTCCACCACAAGTGGGGACACCTCTGCATATCTGCTCCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGGGCGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTTTCTTGATGGTTTCCTaGGAGGCCTCCTCCCAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: PRAWQQPWKTLPTSLMASFLMVS*EASSQR Trigger: TCGCTGGGAGGAGGCCTCCAAGGAAACCATCAAGAA...AGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS GCA 90 bp | CCACTCGTGTCAAGCTCCTGGACTCCCATATGGAGCCCTCTGAGGTaGTCTGGGGTTCGTCCCCTCCAGATGCATTTGTTTCATGACTTC | + |
|
Preference number: 5 (lower is better) Translates to: PLVSSSWTPIWSPLR*SGVRPLQMHLFHDF Trigger: GAAGTCATGAAACAAATGCATCTGGAGGGGACGAACCCCAGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGAGCTTGACACGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
||
| CDS-3UTR CAA 90 bp | GCTCAGCGGCTCTTTTGTCCACCCTGTAGGCCTGAGAAGTGGCTCCTGAGGGTTTTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: AQRLFCPPCRPEKWLLRVLATTS*SCKMLV Trigger: CACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAA...AACCCTCAGGAGCCACTTCTCAGGCCTACAGGGTGGACAAAAGAGCCGCTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | AGCTACACACGGCAGGGAGTAGCCAAGTTGAGCATCGTGGACAAACTGCCGATCCAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: SYTRQGVAKLSIVDKLPIQGEGC*FAGATL Trigger: CAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTG...GATCGGCAGTTTGTCCACGATGCTCAACTTGGCTACTCCCTGCCGTGTGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | GTTGGGACAGCCAGCTACACACGGCAGGGAGTAGCCAAGTTGAGCATCGTGGACCACCACTCATCCGGTTaGGAATTAAGACATCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: VGTASYTRQGVAKLSIVDHHSSG*ELRHRP Trigger: GGGACGATGTCTTAATTCCAAACCGGATGAGTGGTG...GTCCACGATGCTCAACTTGGCTACTCCCTGCCGTGTGTAGCTGGCTGTCCCAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS TCA 90 bp | TTGGAATTAAGACATCGTCCCAGCAAGATGGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGGTGCCACACTGAACTCGGAGCTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LELRHRPSKMGPGPR*GLLVCRCHTELGAF Trigger: GAAAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGATGTCTTAATTCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
||
| CDS CCA 90 bp | ATTCGGAAGCTCCTTCCCGGCAAAAATCACACGCAGCTGGTCAGCTaGAACCCCCTGTCGCTTAGCAACCACTTCCTTGAGCTGCAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: IRKLLPGKNHTQLVS*NPLSLSNHFLELQD Trigger: ATCTTGCAGCTCAAGGAAGTGGTTGCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTTTGCCGGGAAGGAGCTTCCGAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
||
| CDS-3UTR CAA 90 bp | TGCGATTACGTCACACGGGTGTGGAAGGAGGCAGAGGCAAGCACAATGATGGAACAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: CDYVTRVWKEAEASTMMEQGEGC*FAGATL Trigger: CAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTG...TTCCATCATTGTGCTTGCCTCTGCCTCCTTCCACACCCGTGTGACGTAATCGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS TCA 90 bp | AAAGCTGTTGTAGGTGGGTTTAACTGCTGGACCTCTGGCTGCTTCTaGATCCCTCTTACTGTCTGTGTCCAGAATGACCGCCAGCCCCAC | + |
|
Preference number: 5 (lower is better) Translates to: KAVVGGFNCWTSGCF*IPLTVCVQNDRQPH Trigger: GTGGGGCTGGCGGTCATTCTGGACACAGACAGTAAGAGGGATTCAGAAGCAGCCAGAGGTCCAGCAGTTAAACCCACCTACAACAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR CAA 90 bp | TCGAGCAGTGAGTCGCAATCCCCTTCATGGTATGCTTCCTTACAGTCCCGGCAGTTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSESQSPSWYASLQSRQLATTS*SCKMLV Trigger: CACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAA...CTGCCGGGACTGTAAGGAAGCATACCATGAAGGGGATTGCGACTCACTGCTCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | TTTTTCAATTGGCACGTTGCAGCGAGGACAAGGCTTGGTGGTCTTCTTGATGGTTTTCCAGGCTGGACCTaGTGGCAGGGGCCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: FFNWHVAARTRLGGLLDGFPGWT*WQGPLQ Trigger: CTGCAAAGGCCCCTGCCACAAGGTCCAGCCTGGAAA...ACCATCAAGAAGACCACCAAGCCTTGTCCTCGCTGCAACGTGCCAATTGAAAAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000233294.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | ATGGAGCTCTTTAATCAGGGAGTTGGGACAGCCAGCTACACACGGCAGGGAGTATTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: MELFNQGVGTASYTRQGVLATTS*SCKMLV Trigger: CACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAA...TACTCCCTGCCGTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGAGCTCCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACTTTCCAGGCTGGACCTaGTGGCAGGGGCCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHFPGWT*WQGPLQ Trigger: CTGCAAAGGCCCCTGCCACAAGGTCCAGCCTGGAAA...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | ATACACTTCACAGAAAGAGAAAGATTGCTTTGCAGAGGTTTGATTTCCACTCTTCCGCAGCCCAGGCCGTaGCCCCCTTCGCAGGTGACT | + |
|
Preference number: 5 (lower is better) Translates to: IHFTERERLLCRGLISTLPQPRP*PPSQVT Trigger: AGTCACCTGCGAAGGGGGCAACGGCCTGGGCTGCGG...AAGAGTGGAAATCAAACCTCTGCAAAGCAATCTTTCTCTTTCTGTGAAGTGTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | CCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACACTGTGGCAGCGAGGACAAGGCTaGGTGGTCTTCTTGATGGTT | + |
|
Preference number: 5 (lower is better) Translates to: PTIHTHTMQAVIHAHTLWQRGQG*VVFLMV Trigger: AACCATCAAGAAGACCACCAAGCCTTGTCCTCGCTG...CCACAGTGTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | CGTGGCAACAACCCTGGAAAACACTTCCCACCTCACTCATGGCTTCTACAGAATTTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: RGNNPGKHFPPHSWLLQNLATTS*SCKMLV Trigger: CACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAA...ATTCTGTAGAAGCCATGAGTGAGGTGGGAAGTGTTTTCCAGGGTTGTTGCCACG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | ACGCATTCCTCGGCCCCATACTGCTGGTACCTAGTGTACTGCTCTTCTCCAAGGGTGTACAATACTCTGTaGTTCCAGGTCACAGTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: THSSAPYCWYLVYCSSPRVYNTL*FQVTVL Trigger: CAAAACTGTGACCTGGAACAACAGAGTATTGTACAC...CCTTGGAGAAGAGCAGTACACTAGGTACCAGCAGTATGGGGCCGAGGAATGCGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
||
| CDS-3UTR CAA 90 bp | TACCCAAAGCAGAACAGCAAACATTGTCCTGGCTTCCCAATGCGATTACGTCACCACCACTCATCCGGTTaGGAATTAAGACATCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: YPKQNSKHCPGFPMRLRHHHSSG*ELRHRP Trigger: GGGACGATGTCTTAATTCCAAACCGGATGAGTGGTG...GTGACGTAATCGCATTGGGAAGCCAGGACAATGTTTGCTGTTCTGCTTTGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS-3UTR CAA 90 bp | CTTTTATCCCACTATTCACACTCACACAATGCAGGCTGTGATTCATGCTCACACGGGATGCTGCGCCTGTaGCTGGTGATCAGGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LLSHYSHSHNAGCDSCSHGMLRL*LVIRFK Trigger: TTTGAACCTGATCACCAGCAACAGGCGCAGCATCCC...GTGTGAGCATGAATCACAGCCTGCATTGTGTGAGTGTGAATAGTGGGATAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
||
| CDS CCA 90 bp | GGGTTCGTCCCCTCCAGATGCATTTGTTTCATGACTTCTCCTCCGTaGTCTCTGTACTATGTGTACAATACTCTGTTGTTCCAGGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: GFVPSRCICFMTSPP*SLYYVYNTLLFQVT Trigger: TGTGACCTGGAACAACAGAGTATTGTACACATAGTACAGAGACCACGGAGGAGAAGTCATGAAACAAATGCATCTGGAGGGGACGAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
||
| CDS CCA 90 bp | CATTTAAAGAAAAATTCAGCTCTGGTTCCAGGGCAGTCTGGAGACTaGCACTCACCACTCATCCGGTTTGGAATTAAGACATCGTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLKKNSALVPGQSGD*HSPLIRFGIKTSSQ Trigger: CTGGGACGATGTCTTAATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCAGAGCTGAATTTTTCTTTAAATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCTTTTCACTTCACTTTGCTATCACAGACACACCCAAGGTATGCTTCATCAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTG | + |
|
Preference number: 5 (lower is better) Translates to: ERLFTSLCYHRHTQGMLHQGEGC*FAGATL Trigger: CAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTG...ATGAAGCATACCTTGGGTGTGTCTGTGATAGCAAAGTGAAGTGAAAAGCCTTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| CDS-3UTR CAA 90 bp | GGAGAGATGGCTCAGGGATTAAGAGAACTTTCTGTTCTTGCAGAGGACCTGATTCACCACTCATCCGGTTaGGAATTAAGACATCGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: GEMAQGLRELSVLAEDLIHHSSG*ELRHRP Trigger: GGGACGATGTCTTAATTCCAAACCGGATGAGTGGTG...AATCAGGTCCTCTGCAAGAACAGAAAGTTCTCTTAATCCCTGAGCCATCTCTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAGCATCGTGGACAAACTGCCGATCGTTGAGTCTTGTGACACAATACAATTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: KLSIVDKLPIVESCDTIQLATTS*SCKMLV Trigger: CACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAA...TTGTATTGTGTCACAAGACTCAACGATCGGCAGTTTGTCCACGATGCTCAACTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000233294.2 ENSMUST00000233436.2 ENSMUST00000233634.2 |
||
| CDS-3UTR CAA 90 bp | TATTCACTCATGGGCTTTGCCCATAGAAAGGCTTTTCACTTCACTTTGCTATCAGGGATGCTGCGCCTGTaGCTGGTGATCAGGTTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: YSLMGFAHRKAFHFTLLSGMLRL*LVIRFK Trigger: TTTGAACCTGATCACCAGCAACAGGCGCAGCATCCC...TGATAGCAAAGTGAAGTGAAAAGCCTTTCTATGGGCAAAGCCCATGAGTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS-3UTR CAA 90 bp | GTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGAATCTCTTTAATCAGGGAGTaGGGACAGCCAGCTACACAC | + |
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Preference number: 5 (lower is better) Translates to: VIHAHTLWMPVFWVILRISLIRE*GQPATH Trigger: GTGTGTAGCTGGCTGTCCCAACTCCCTGATTAAAGA...GATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CAA 90 bp | ATAGTTTTGACTACTGCAGGGGGCCCTTTGGGAATAGATGATTACTACATGAGAGTGTACAATACTCTGTaGTTCCAGGTCACAGTTTTG | + |
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Preference number: 5 (lower is better) Translates to: IVLTTAGGPLGIDDYYMRVYNTL*FQVTVL Trigger: CAAAACTGTGACCTGGAACAACAGAGTATTGTACAC...TCTCATGTAGTAATCATCTATTCCCAAAGGGCCCCCTGCAGTAGTCAAAACTAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS-3UTR CAA 90 bp | GTGATTCATGCTCACACACTGTGGATGCCTGTCTTTTGGGTTATTTTAAGAATCACAAACTGCCGATCGTaGAGTCTTGTGACACAATAC | + |
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Preference number: 5 (lower is better) Translates to: VIHAHTLWMPVFWVILRITNCRS*SLVTQY Trigger: GTATTGTGTCACAAGACTCAACGATCGGCAGTTTGT...GATTCTTAAAATAACCCAAAAGACAGGCATCCACAGTGTGTGAGCATGAATCAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000191124.7 |
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| CDS CCA 72 bp | TCAGGTCCACTCGTGTCAAGCTCCTGGACTCCCATATaGAGCCCTCTGAGGTGCTCTGGGGTTCGTCCCCTC | + |
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Preference number: 6 (lower is better) Translates to: SGPLVSSSWTPI*SPLRCSGVRPL Trigger: GAGGGGACGAACCCCAGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGAGCTTGACACGAGTGGACCTGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CCA 72 bp | GGGTATGGCTGCTCAGGTCCACTCGTGTCAAGCTCCTaGACTCCCATATGGAGCCCTCTGAGGTGCTCTGGG | + |
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Preference number: 6 (lower is better) Translates to: GYGCSGPLVSSS*TPIWSPLRCSG Trigger: CCCAGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGAGCTTGACACGAGTGGACCTGAGCAGCCATACCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CAA 90 bp | GACATCGTCCCAGCAAGATGGGCCCTGGGCCAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTGAACTCGGAGCTTTCCAGGCTGGAC | + |
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Preference number: 6 (lower is better) Translates to: DIVPARWALGQGEGC*FAGATLNSELSRLD Trigger: GTCCAGCCTGGAAAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGATGTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233634.2 |
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| CDS GCA 72 bp | GTCCCAGCAAGATGGGCCCTGGGCCAAGGTGAGGGTTaGTTGTTTGCAGGTGCCACACTGAACTCGGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: VPARWALGQGEG*LFAGATLNSEL Trigger: AAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCCATCTTGCTGGGAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 6 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233634.2 |
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| CDS CAA 90 bp | GACATCGTCCCAGCAAGATGGGCCCTGGGCCAAGGTGAGGGTTGCTaGTTTGCAGGTGCCACACTGAACTCGGAGCTTTCCAGGCTGGAN | + |
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Preference number: 6 (lower is better) Translates to: DIVPARWALGQGEGC*FAGATLNSELSRLX Trigger: NTCCAGCCTGGAAAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS CAA 90 bp | CGCAGCTGGTCAGCTGGAACCCCCTGTCGCTTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTGTCAGAATCGACCTCCACTGGGAAG | + |
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Preference number: 6 (lower is better) Translates to: RSWSAGTPCRLATTS*SCKMLVSESTSTGK Trigger: CTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
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| CDS CAA 90 bp | TGGTTCCAGGGCAGTCTGGAGACTGGCACTCACCACTCATCCGGTTaGGAATTAAGACATCGTCCCAGCAAGATGGGCCCTGGGCCAAGG | + |
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Preference number: 6 (lower is better) Translates to: WFQGSLETGTHHSSG*ELRHRPSKMGPGPR Trigger: CCTTGGCCCAGGGCCCATCTTGCTGGGACGATGTCTTAATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS TCA 72 bp | GCCAAGGTGAGGGTTGCTTGTTTGCAGGTGCCACACTaGACTCGGAGCTTTCCAGGCTGGACCTTGTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AKVRVACLQVPH*TRSFPGWTLWQ Trigger: CTGCCACAAGGTCCAGCCTGGAAAGCTCCGAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233634.2 |
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| CDS TCA 72 bp | AGACATCGTCCCAGCAAGATGGGCCCTGGGCCAAGGTaGGGGTTGCTTGTTTGCAGGTGCCACACTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: RHRPSKMGPGPR*GLLVCRCHTEL Trigger: GAGTTCAGTGTGGCACCTGCAAACAAGCAACCCTCACCTTGGCCCAGGGCCCATCTTGCTGGGACGATGTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233634.2 |
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| CDS TCA 72 bp | TCCGTGGGTACCTGCACTGGTAGTCAGGTACAACCCTaGCATCTGTGCACGCTATGCAAGGGATGCTGCGCC | + |
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Preference number: 6 (lower is better) Translates to: SVGTCTGSQVQP*HLCTLCKGCCA Trigger: GGCGCAGCATCCCTTGCATAGCGTGCACAGATGTCAGGGTTGTACCTGACTACCAGTGCAGGTACCCACGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000186406.2 |
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| CDS CCA 72 bp | ACCAGGACAGGGCTCAGCTCTGGTTCCAGGGCAGTCTaGAGACTGGCACTCACCACTCATCCGGTTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: TRTGLSSGSRAV*RLALTTHPVWN Trigger: ATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCAGAGCTGAGCCCTGTCCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000233294.2 |
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| CDS TCA 72 bp | CTGCTTCTGAATCCCTCTTACTGTCTGTGTCCAGAATaGCCGCCAGCCCCACAGAGTCCACCGGCAGGGTAT | + |
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Preference number: 6 (lower is better) Translates to: LLLNPSYCLCPE*PPAPQSPPAGY Trigger: ATACCCTGCCGGTGGACTCTGTGGGGCTGGCGGTCATTCTGGACACAGACAGTAAGAGGGATTCAGAAGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS GCA 72 bp | GGAACCCCCTGTCGCTTAGCAACCACTTCCTTGAGCTaGAAGATGCTGGTGTCAGAATCGACCTCCACTGGG | + |
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Preference number: 6 (lower is better) Translates to: GTPCRLATTSLS*KMLVSESTSTG Trigger: CCCAGTGGAGGTCGATTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAAGCGACAGGGGGTTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
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| CDS CCA 72 bp | TTCGGAAGCTCCTTCCCGGCAAAAATCACACGCAGCTaGTCAGCTGGAACCCCCTGTCGCTTAGCAACCACT | + |
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Preference number: 6 (lower is better) Translates to: FGSSFPAKITRS*SAGTPCRLATT Trigger: AGTGGTTGCTAAGCGACAGGGGGTTCCAGCTGACCAGCTGCGTGTGATTTTTGCCGGGAAGGAGCTTCCGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
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| CDS GCA 72 bp | TCAAGCTCCTGGACTCCCATATGGAGCCCTCTGAGGTaGTCTGGGGTTCGTCCCCTCCAGATGCATTTGTTT | + |
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Preference number: 6 (lower is better) Translates to: SSSWTPIWSPLR*SGVRPLQMHLF Trigger: AAACAAATGCATCTGGAGGGGACGAACCCCAGAGCACCTCAGAGGGCTCCATATGGGAGTCCAGGAGCTTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CAA 72 bp | TCAGCTGGAACCCCCTGTCGCTTAGCAACCACTTCCTaGAGCTGCAAGATGCTGGTGTCAGAATCGACCTCC | + |
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Preference number: 6 (lower is better) Translates to: SAGTPCRLATTS*SCKMLVSESTS Trigger: GGAGGTCGATTCTGACACCAGCATCTTGCAGCTCAAGGAAGTGGTTGCTAAGCGACAGGGGGTTCCAGCTGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
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| CDS CAA 72 bp | GGCAGTCTGGAGACTGGCACTCACCACTCATCCGGTTaGGAATTAAGACATCGTCCCAGCAAGATGGGCCCT | + |
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Preference number: 6 (lower is better) Translates to: GSLETGTHHSSG*ELRHRPSKMGP Trigger: AGGGCCCATCTTGCTGGGACGATGTCTTAATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CCA 72 bp | GAGCTGCAAGATGCTGGTGTCAGAATCGACCTCCACTaGGAAGCCATAGCTGGAGTTGAACCTGACAAACAC | + |
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Preference number: 6 (lower is better) Translates to: ELQDAGVRIDLH*EAIAGVEPDKH Trigger: GTGTTTGTCAGGTTCAACTCCAGCTATGGCTTCCCAGTGGAGGTCGATTCTGACACCAGCATCTTGCAGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 ENSMUST00000233411.2 ENSMUST00000233436.2 ENSMUST00000233634.2 ENSMUST00000233782.2 |
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| CDS TCA 72 bp | CTCTGGGGTTCGTCCCCTCCAGATGCATTTGTTTCATaGCTTCTCCTCCGTGGTCTCTGTACTATGTGTACA | + |
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Preference number: 6 (lower is better) Translates to: LWGSSPPDAFVS*LLLRGLCTMCT Trigger: TGTACACATAGTACAGAGACCACGGAGGAGAAGTCATGAAACAAATGCATCTGGAGGGGACGAACCCCAGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CAA 72 bp | TATGTGTACAATACTCTGTTGTTCCAGGTCACAGTTTaGAACCGTCAGGTGATTCGGAAGCTCCTTCCCGGC | + |
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Preference number: 6 (lower is better) Translates to: YVYNTLLFQVTV*NRQVIRKLLPG Trigger: GCCGGGAAGGAGCTTCCGAATCACCTGACGGTTCAAAACTGTGACCTGGAACAACAGAGTATTGTACACATA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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| CDS CCA 72 bp | TTTAAAGAAAAATTCAGCTCTGGTTCCAGGGCAGTCTaGAGACTGGCACTCACCACTCATCCGGTTTGGAAT | + |
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Preference number: 6 (lower is better) Translates to: FKEKFSSGSRAV*RLALTTHPVWN Trigger: ATTCCAAACCGGATGAGTGGTGAGTGCCAGTCTCCAGACTGCCCTGGAACCAGAGCTGAATTTTTCTTTAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000186406.2 ENSMUST00000191124.7 ENSMUST00000218435.2 |
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| CDS CAA 90 bp | TCTCTGTACTATGTGTACAATACTCTGTTGTTCCAGGTCACAGTTTaGAACCGTCAGGTGATTCGGAAGCTCCTTCCCGGCAAAAATCAC | + |
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Preference number: 6 (lower is better) Translates to: SLYYVYNTLLFQVTV*NRQVIRKLLPGKNH Trigger: GTGATTTTTGCCGGGAAGGAGCTTCCGAATCACCTGACGGTTCAAAACTGTGACCTGGAACAACAGAGTATTGTACACATAGTACAGAGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000168593.9 ENSMUST00000191124.7 ENSMUST00000218435.2 ENSMUST00000233294.2 |
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