Pregenerated sensors for PRKG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052920Ensembl transcript IDs: ENSMUST00000065067.14, ENSMUST00000073581.6, ENSMUST00000182459.2, ENSMUST00000239061.2
Found 284 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGAGGGCTAGCAACATACTTCCAACGGTTTGCTTTCAAAGTCTCCTaGAAACTCGCCTCATACATGATTTACATATACGAGAACTCAGAG | + |
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Preference number: 1 (lower is better) Translates to: GGLATYFQRFAFKVS*KLASYMIYIYENSE Trigger: CTCTGAGTTCTCGTATATGTAAATCATGTATGAGGCGAGTTTTCAGGAGACTTTGAAAGCAAACCGTTGGAAGTATGTTGCTAGCCCTCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR TCA 90 bp | TCCAACGGTTTGCTTTCAAAGTCTCCTGAAAACTCGCCTCATACATaGTTTACATATACGAGAACTCAGAGAGAGCATCCTGTTTTGTTG | + |
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Preference number: 1 (lower is better) Translates to: SNGLLSKSPENSPHT*FTYTRTQREHPVLL Trigger: CAACAAAACAGGATGCTCTCTCTGAGTTCTCGTATATGTAAATCATGTATGAGGCGAGTTTTCAGGAGACTTTGAAAGCAAACCGTTGGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR GCA 90 bp | ACTATGTACCCATCATGGGAGGCTCGTACAAGAACCATACAGTTGTaGTTTTTAAATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAA | + |
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Preference number: 1 (lower is better) Translates to: TMYPSWEARTRTIQL*FLNQGQCLEPIRKK Trigger: TTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATTTAAAAAGCACAACTGTATGGTTCTTGTACGAGCCTCCCATGATGGGTACATAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | CCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCTCTTTCCCTCAGGTTTaGTGGCAGCTGTGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: PNATVVTGAASIKGIMVTSFPQV*WQLCLR Trigger: TCTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGA...GGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCTTACTCTGATAAACTTCTCTAGGGAACAGCCCTCTACTCCTGGTTTTCATCTAGCACTGGTTTaGCATGAACTCTGCGACCCA | + |
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Preference number: 2 (lower is better) Translates to: PLLTLINFSREQPSTPGFHLALV*HELCDP Trigger: TGGGTCGCAGAGTTCATGTCAAACCAGTGCTAGATG...AAAACCAGGAGTAGAGGGCTGTTCCCTAGAGAAGTTTATCAGAGTAAGAAGGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR GCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGTCTTTCCCTCAGGTTTaGTGGCAGCTGTGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: MNSATHRYVVLVVQYISQSFPQV*WQLCLR Trigger: TCTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGA...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTTCAAAGGCATCATGGTaGCCCCGAGCACTAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: FTGERLCFRTTMSTAILGSKASW*PRALIF Trigger: GAAGATTAGTGCTCGGGGTCACCATGATGCCTTTGA...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTTCAAAGGCATCATGGTaGCCCCGAGCACTAATCTTC | + |
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Preference number: 2 (lower is better) Translates to: LVVLARCRPFYLKCFLHSSKASW*PRALIF Trigger: GAAGATTAGTGCTCGGGGTCACCATGATGCCTTTGA...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGTGCCACTGTAGTTACTaGAGCAGCATCGATCAAAGG | + |
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Preference number: 2 (lower is better) Translates to: MNSATHRYVVLVVQYISQCHCSY*SSIDQR Trigger: CCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCA...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTTCAAAGGCATCATGGTaGCCCCGAGCACTAATCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RKHHFTGERLCFRTTMSTSKASW*PRALIF Trigger: GAAGATTAGTGCTCGGGGTCACCATGATGCCTTTGA...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGCATCTAGCACTGGTTTaGCATGAACTCTGCGACCCA | + |
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Preference number: 2 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLHLALV*HELCDP Trigger: TGGGTCGCAGAGTTCATGTCAAACCAGTGCTAGATG...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTTCTTTCCCTCAGGTTTaGTGGCAGCTGTGTCTCAGA | + |
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Preference number: 2 (lower is better) Translates to: RKHHFTGERLCFRTTMSTSFPQV*WQLCLR Trigger: TCTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGA...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTTTCCCTCAGGTTTaGTGGCAGCTGTGTCTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLSFPQV*WQLCLR Trigger: TCTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGA...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CCA 90 bp | GAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGTGCCACTGTAGTTACTaGAGCAGCATCGATCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: ENIILLVKGFASGPPCQLCHCSY*SSIDQR Trigger: CCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCA...CAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR CCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTGCCACTGTAGTTACTaGAGCAGCATCGATCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HHFTGERLCFRTTMSTAICHCSY*SSIDQR Trigger: CCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCA...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | CCCCTTCTTACTCTGATAAACTTCTCTAGGGAACAGCCCTCTACTCCTGGTTTTTATGAAATGGTGTTGTaGATTCCTTTTCCCACTTCC | + |
|
Preference number: 2 (lower is better) Translates to: PLLTLINFSREQPSTPGFYEMVL*IPFPTS Trigger: GGAAGTGGGAAAAGGAATTCACAACACCATTTCATA...AAAACCAGGAGTAGAGGGCTGTTCCCTAGAGAAGTTTATCAGAGTAAGAAGGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR GCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCACTGGTGAAAGGCTTTaGTTCAGGACCACCATGTCA | + |
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Preference number: 2 (lower is better) Translates to: ECSPGSVPQSSIVPNILFTGERL*FRTTMS Trigger: TGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGT...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGACTGGTGAAAGGCTTTaGTTCAGGACCACCATGTCA | + |
|
Preference number: 2 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLTGERL*FRTTMS Trigger: TGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGT...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTTGCCACTGTAGTTACTaGAGCAGCATCGATCAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: RKHHFTGERLCFRTTMSTCHCSY*SSIDQR Trigger: CCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCA...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCACATCATTTTACTGGTaGAAGGCTTTGCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVTSFYW*KALLQD Trigger: GTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGT...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | ATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAGCTCGATATATATCCCAGCTTaGAGTCACAGGCTCTCTACC | + |
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Preference number: 2 (lower is better) Translates to: MFRTDQKEKVPFSLVISSIYIPA*SHRLST Trigger: GGTAGAGAGCCTGTGACTGCAAGCTGGGATATATAT...CGAGCTGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTTTGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCCTAAGACGTCCACTCAGACACTaGTGTCACAGAAGAAAGAAA | + |
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Preference number: 2 (lower is better) Translates to: VFVLSDWTYVFCFGSGLRRPLRH*CHRRKK Trigger: TTTCTTTCTTCTGTGACATCAGTGTCTGAGTGGACG...TCTTAGGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
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| 3UTR CAA 90 bp | AAGTCAACAAAGCTCCTTAGTACAGTCAAGTCTGAACACTTGTCTTaGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCC | + |
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Preference number: 2 (lower is better) Translates to: KSTKLLSTVKSEHLS*CFQTGHMYFVLVQA Trigger: GGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAGACAAGTGTTCAGACTTGACTGTACTAAGGAGCTTTGTTGACTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR TCA 90 bp | CTTTGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCCTAAGACAACATCATTTTACTGGTaGAAGGCTTTGCTTCAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LCAFRLDICILFWFRPKTTSFYW*KALLQD Trigger: GTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGT...TGTCTTAGGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
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| 3UTR-3UTR GCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCGACCACCATGTCAACTaGTATTTTAGGTTCAAACAT | + |
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Preference number: 2 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVDHHVN*YFRFKH Trigger: ATGTTTGAACCTAAAATAGCAGTTGACATGGTGGTC...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR CAA 90 bp | TACCACAGTCATCTATCGTACCAAATATATTATTCTCTATTCTCCTaGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTC | + |
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Preference number: 2 (lower is better) Translates to: YHSHLSYQIYYSLFS*VVLARCRPFYLKCF Trigger: GAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGATAGATGACTGTGGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR CAA 90 bp | CACACATATATCCAAATCAGGATGTTATCTTGGACAATTGTTCATTaGTCTGTACAAATAAATGTCACCTGCCAAGGGAAACCTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: HTYIQIRMLSWTIVH*SVQINVTCQGKPLE Trigger: TTCCAGAGGTTTCCCTTGGCAGGTGACATTTATTTGTACAGACAAATGAACAATTGTCCAAGATAACATCCTGATTTGGATATATGTGTG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR GCA 90 bp | CTGTCATTTGGAAATGAAGTGAGGACGATTCCACAGTTTAGAAATTATTCTACAGAACACTTGTCTTTGTaGTTTCAGACTGGACATATG | + |
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Preference number: 2 (lower is better) Translates to: LSFGNEVRTIPQFRNYSTEHLSL*FQTGHM Trigger: CATATGTCCAGTCTGAAAGCACAAAGACAAGTGTTC...TGTAGAATAATTTCTAAACTGTGGAATCGTCCTCACTTCATTTCCAAATGACAG 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR GCA 72 bp | AAAGAAATGTCCCTTTACGTAGAAAGCCCAAACCTCTaGGTCATAGCCAAGGTCCCAGAGCTCTGTCTGTCG | + |
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Preference number: 3 (lower is better) Translates to: KEMSLYVESPNL*VIAKVPELCLS Trigger: CGACAGACAGAGCTCTGGGACCTTGGCTATGACGCAGAGGTTTGGGCTTTCTACGTAAAGGGACATTTCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR CAA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGCTCTTTCCCTCAGGTTaGCTGGCAGCTGTGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: MNSATHRYVVLVVQYISQLFPSG*LAAVSQ Trigger: CTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGAG...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CAA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTCTCTTTCCCTCAGGTTaGCTGGCAGCTGTGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPLFPSG*LAAVSQ Trigger: CTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGAG...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR TCA 72 bp | GCTCGGAAAGAAACTCAGAAACATCTAGCACTGGTTTaGCATGAACTCTGCGACCCACAGATATGTGGTCCT | + |
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Preference number: 3 (lower is better) Translates to: ARKETQKHLALV*HELCDPQICGP Trigger: AGGACCACATATCTGTGGGTCGCAGAGTTCATGTCAAACCAGTGCTAGATGTTTCTGAGTTTCTTTCCGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR GCA 72 bp | AACACTGTGATGTCCTTTCTCGGCAGTTTGCTGTTTTaGTGTGATTTCGGACACACAGGAAGCCCTATTTCC | + |
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Preference number: 3 (lower is better) Translates to: NTVMSFLGSLLF*CDFGHTGSPIS Trigger: GGAAATAGGGCTTCCTGTGTGTCCGAAATCACAGCAAAACAGCAAACTGCCGAGAAAGGACATCACAGTGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR GCA 72 bp | AGAAGGAGGAGGGCTAGCAACATACTTCCAACGGTTTaGTTTCAAAGTCTCCTGAAAACTCGCCTCATACAT | + |
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Preference number: 3 (lower is better) Translates to: RRRRASNILPTV*FQSLLKTRLIH Trigger: ATGTATGAGGCGAGTTTTCAGGAGACTTTGAAAGCAAACCGTTGGAAGTATGTTGCTAGCCCTCCTCCTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR-3UTR CAA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCCTCTTTCCCTCAGGTTaGCTGGCAGCTGTGTCTCAG | + |
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Preference number: 3 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSLFPSG*LAAVSQ Trigger: CTGAGACACAGCTGCCAGCAAACCTGAGGGAAAGAG...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTGCAGACCCTTCTACTaGAAGTGTTTCCTACACTCT | + |
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Preference number: 3 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVCRPFY*KCFLHS Trigger: AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCA...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CAA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCAATATATATCCCAGCTaGCAGTCACAGGCTCTCTAC | + |
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Preference number: 3 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVNIYPS*QSQALY Trigger: GTAGAGAGCCTGTGACTGCAAGCTGGGATATATATT...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR-3UTR CAA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTGCAGACCCTTCTACTaGAAGTGTTTCCTACACTCT | + |
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Preference number: 3 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLCRPFY*KCFLHS Trigger: AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCA...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR TCA 72 bp | TTGCTTTCAAAGTCTCCTGAAAACTCGCCTCATACATaGTTTACATATACGAGAACTCAGAGAGAGCATCCT | + |
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Preference number: 3 (lower is better) Translates to: LLSKSPENSPHT*FTYTRTQREHP Trigger: AGGATGCTCTCTCTGAGTTCTCGTATATGTAAATCATGTATGAGGCGAGTTTTCAGGAGACTTTGAAAGCAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR TCA 72 bp | GCAACATACTTCCAACGGTTTGCTTTCAAAGTCTCCTaGAAACTCGCCTCATACATGATTTACATATACGAG | + |
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Preference number: 3 (lower is better) Translates to: ATYFQRFAFKVS*KLASYMIYIYE Trigger: CTCGTATATGTAAATCATGTATGAGGCGAGTTTTCAGGAGACTTTGAAAGCAAACCGTTGGAAGTATGTTGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR GCA 72 bp | TATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATaGAGACCCTTCTACTTGAAGTGTTTCCTACACTCT | + |
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Preference number: 3 (lower is better) Translates to: YYSLFSLVVLAR*RPFYLKCFLHS Trigger: AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| 3UTR TCA 72 bp | TTAAATACATGGTCTGTGCTAATTCCTGGGTATCTGTaGCTATTTGAAAAATTAGAGAGACAGATCCCCTCT | + |
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Preference number: 3 (lower is better) Translates to: LNTWSVLIPGYL*LFEKLERQIPS Trigger: AGAGGGGATCTGTCTCTCTAATTTTTCAAATAGTCACAGATACCCAGGAATTAGCACAGACCATGTATTTAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| 3UTR TCA 72 bp | GTTTTTAATCTACATCAAAAGAGTGCAAGTGGCCAATaGCCATTAGATGACAGTTTGTTGCATTCTAACAAA | + |
|
Preference number: 3 (lower is better) Translates to: VFNLHQKSASGQ*PLDDSLLHSNK Trigger: TTTGTTAGAATGCAACAAACTGTCATCTAATGGTCATTGGCCACTTGCACTCTTTTGATGTAGATTAAAAAC 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| 3UTR GCA 72 bp | TCTAGCTCAGGTGAAATTTCAAGATTGCAATACCTCTaGTTGATTCAGCTAAAAATGTCGTTTTTGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SSSGEISRLQYL*LIQLKMSFLRN Trigger: ATTTCTCAAAAACGACATTTTTAGCTGAATCAAGCAGAGGTATTGCAATCTTGAAATTTCACCTGAGCTAGA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGTGCTTCTGCGCCTGCTaGGTGGCCGGCCGGATCACC | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLCFCAC*VAGRIT Trigger: GGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCA...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACGCCCCCTGCATGATCTaGTTCTCTGAGCGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHAPCMI*FSERMC Trigger: GCACATCCGCTCAGAGAAGCAGATCATGCAGGGGGC...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACCCTTCCCATCTTCCATaGCGTACACCAGTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHPSHLP*RTPVTP Trigger: TGGGGTCACTGGTGTACGTCATGGAAGATGGGAAGG...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGGTCTATGTCCCAGCCTaGGTTGTCATCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLVYVPA*VVIRWW Trigger: CCACCACCTGATGACAACTCAGGCTGGGACATAGAC...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGTTCTCTGAGCGGATGTaGTCCTGCTGTCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLFSERM*SCCLVS Trigger: GGACACCAGACAGCAGGAGCACATCCGCTCAGAGAA...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACATGAGAGCATCCCGCTaGCTCAGCTCCTCGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHMRASR*LSSSIF Trigger: GAAGATCGAGGAGCTGAGGCAGCGGGATGCTCTCAT...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACCAGACAGCTTCAGGTTaGCGAAGAAGGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHQTASG*RRRQLR Trigger: CCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTG...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGGTTGTCATCAGGTGGTaGCTCATCGCTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLVVIRW*LIAVLR Trigger: CCTGAGGACAGCGATGAGCCACCACCTGATGACAAC...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGTTCCAGGACCCATGGTaGAGAGCTTCACGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLFQDPW*RASRLL Trigger: AAGAAGGCGTGAAGCTCTGCACCATGGGTCCTGGAA...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | AGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGGTTCACCCTGCAAGGTaGTGGCGCTCTGCTTCTGCG | + |
|
Preference number: 4 (lower is better) Translates to: SPNATVVTGAASIKGIMVVHPAR*WRSASA Trigger: CGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAAC...CACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | AGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGATAAGTCCGCGGGCCGATGTGGGTaGAGGGCACCGGCAGCACCG | + |
|
Preference number: 4 (lower is better) Translates to: RFKHKTGKEHYRHLSDKSAGRCG*RAPAAP Trigger: CGGTGCTGCCGGTGCCCTCCACCCACATCGGCCCGC...GGACTTATCGCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGTGGGAGGTGTCAAGGTaGCTTTTCTTAAGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLWEVSR*LFLSLP Trigger: GGGAAGGCTTAAGAAAAGGCACCTTGACACCTCCCA...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGGTCCGCGGGCCGATGTaGGTGGAGGGCACCGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: IVPNILFSILLGSSSKMQVRGPM*VEGTGS Trigger: GCTGCCGGTGCCCTCCACCCACATCGGCCCGCGGAC...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGAACTTCCGGAACGCCTaGCGCAGGTCGTGGAAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: MNSATHRYVVLVVQYISQNFRNA*RRSWKD Trigger: GTCCTTCCACGACCTGCGCCAGGCGTTCCGGAAGTT...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTCACCCTGCAAGGTGCTaGCGCTCTGCTTCTGCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSHPARC*RSASAP Trigger: AGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTG...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTCCGCGGAGATCGCCTaGCGCTTGGTGCGCGGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: ECSPGSVPQSSIVPNILFSAEIA*RLVRGS Trigger: TGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGA...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCGGATGTCGAAGGCGGTaGGCTCCGCGGAGATCGCCT | + |
|
Preference number: 4 (lower is better) Translates to: ECSPGSVPQSSIVPNILFGCRRR*APRRSP Trigger: AGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCC...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGGGAAACTGTCAAAATTaGTTGTGTCTGTGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLGNCQN*LCLWVT Trigger: CGTCACCCACAGACACAAGCAATTTTGACAGTTTCC...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTATCTGCGCCTGCTGGGTaGCCGGCCGGATCACCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLSAPAG*PAGSPS Trigger: GCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGA...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTACGTGGCTGAGATCCTaGATGTCGAAGGCGGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: FTGERLCFRTTMSTAILGTWLRS*MSKAVG Trigger: GCCCACCGCCTTCGACATCCAGGATCTCAGCCACGT...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGAAGGGCAGGGTCACGTaGCTGAGATCCTGGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: MNSATHRYVVLVVQYISQKGRVT*LRSWMS Trigger: CGACATCCAGGATCTCAGCCACGTGACCCTGCCCTT...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACCAATGTGGCGTTTCTTaGGGATCTTCATTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHQCGVS*GSSLQM Trigger: CATTTGCAATGAAGATCCTCAAGAAACGCCACATTG...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCATTGGATCTGGGCCTaGGAAAGGTGGGCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ENIILLVKGFASGPPCQLHWIWA*ERWAAS Trigger: ACTGGCAGCCCACCTTTCTCAGGCCCAGATCCAATG...CAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTCATTGGATCTGGGCCTaGGAAAGGTGGGCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPHWIWA*ERWAAS Trigger: ACTGGCAGCCCACCTTTCTCAGGCCCAGATCCAATG...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCGCAGGGTCACGTGGCTaGGATCCTGGATGTCGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: ECSPGSVPQSSIVPNILFAGSRG*DPGCRR Trigger: CCTTCGACATCCAGGATCTCAGCCACGTGACCCTGC...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACTTCGGCTTCATATTTTaGTTTTGCTTCTGCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHFGFIF*FCFCVL Trigger: GAGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAA...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ACCTCTGGAAAGTTGTGCCACTTAATAATAGTGGCCAACTGGCCTGCCAACAACTGGGAGGTGTCAAGGTaGCTTTTCTTAAGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: TSGKLCHLIIVANWPANNWEVSR*LFLSLP Trigger: GGGAAGGCTTAAGAAAAGGCACCTTGACACCTCCCA...GTTGTTGGCAGGCCAGTTGGCCACTATTATTAAGTGGCACAACTTTCCAGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR GCA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCCTCTGCTTCTGCGCCTaGTGGGTGGCCGGCCGGATC | + |
|
Preference number: 4 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSLCFCA*WVAGRI Trigger: GATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAG...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | AGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCGACTGGCATTTGTaGAGTTTCCTCTTCAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SPNATVVTGAASIKGIMVTDWHL*SFLFSS Trigger: GGAGCTGAAGAGGAAACTCCACAAATGCCAGTCGGT...CACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR TCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCCCTTCCCATCTTCCATaGCGTACACCAGTGACCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVIPSHLP*RTPVTP Trigger: TGGGGTCACTGGTGTACGTCATGGAAGATGGGAAGG...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTTTCTCTGAGCGGATGTaGTCCTGCTGTCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FTGERLCFRTTMSTAILGFSERM*SCCLVS Trigger: GGACACCAGACAGCAGGAGCACATCCGCTCAGAGAA...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCGTACAAGAACCATACAGTTGTGCTTTTTAAATCAGGGCCAATGTTTAGAGCCCCCTGCATGATCTaGTTCTCTGAGCGGATGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GSYKNHTVVLFKSGPMFRAPCMI*FSERMC Trigger: GCACATCCGCTCAGAGAAGCAGATCATGCAGGGGGC...TCTAAACATTGGCCCTGATTTAAAAAGCACAACTGTATGGTTCTTGTACGAGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | CCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCATGCAGATAGGCGAATaGTTCTACCACACATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PNATVVTGAASIKGIMVTMQIGE*FYHTCS Trigger: ACTGCATGTGTGGTAGAAGCATTCGCCTATCTGCAT...GGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACTCATCAGGAAGGCTCTaGAATGTTGGAACACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHSSGRL*NVGTLF Trigger: AAAAAGTGTTCCAACATTCCAGAGCCTTCCTGATGA...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTGTTGTCATCAGGTGGTaGCTCATCGCTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSVVIRW*LIAVLR Trigger: CCTGAGGACAGCGATGAGCCACCACCTGATGACAAC...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTTCGACTGTGGGCTCTTaGGGTAGAAGGGCAGGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: RKHHFTGERLCFRTTMSTSTVGS*GRRAGS Trigger: TGACCCTGCCCTTCTACCCCAAGAGCCCACAGTCGA...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTCATTTACAAGAGTCTTaGCGGTCGCTGTCCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: HHFTGERLCFRTTMSTAIHLQES*RSLSGY Trigger: GTACCCGGACAGCGACCGTCAAGACTCTTGTAAATG...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | CCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCAATGTGGCGTTTCTTaGGGATCTTCATTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: PNATVVTGAASIKGIMVTQCGVS*GSSLQM Trigger: CATTTGCAATGAAGATCCTCAAGAAACGCCACATTG...GGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGTCTCTGGCTAGACATGATGATTAGAATCTGTGTCGTCCACTCAGACACTACAATGAAGTCAGAATaGGCCCCCTGCATGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSLWLDMMIRICVVHSDTTMKSE*APCMIC Trigger: GCAGATCATGCAGGGGGCTCATTCTGACTTCATTGT...AGTGTCTGAGTGGACGACACAGATTCTAATCATCATGTCTAGCCAGAGACTCAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | AGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGATAAGTCCCATTGGATCTGGGCCTaGGAAAGGTGGGCTGCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RFKHKTGKEHYRHLSDKSHWIWA*ERWAAS Trigger: ACTGGCAGCCCACCTTTCTCAGGCCCAGATCCAATG...GGACTTATCGCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCGTCTATGTCCCAGCCTaGGTTGTCATCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ECSPGSVPQSSIVPNILFVYVPA*VVIRWW Trigger: CCACCACCTGATGACAACTCAGGCTGGGACATAGAC...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGGTCTATGTCCCAGCCTaGGTTGTCATCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLVYVPA*VVIRWW Trigger: CCACCACCTGATGACAACTCAGGCTGGGACATAGAC...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTCTCACATCCTCCCCCTaGAACGCTTTCTCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPLTSSP*NAFSPN Trigger: GTTTGGAGAGAAAGCGTTGCAGGGGGAGGATGTGAG...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATAAGGTGCTGGCGCTCTaGTTCTGCGCCTGCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYKVLAL*FCACWV Trigger: CACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTT...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCCAGACAGCTTCAGGTTaGCGAAGAAGGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: ECSPGSVPQSSIVPNILFQTASG*RRRQLR Trigger: CCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTG...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | GGCTCGTACAAGAACCATACAGTTGTGCTTTTTAAATCAGGGCCAATGTTTAGACAGACAGCTTCAGGTTaGCGAAGAAGGCAGCTTCGG | + |
|
Preference number: 4 (lower is better) Translates to: GSYKNHTVVLFKSGPMFRQTASG*RRRQLR Trigger: CCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTG...TCTAAACATTGGCCCTGATTTAAAAAGCACAACTGTATGGTTCTTGTACGAGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCTGTGCTCCTGCTGTCTaGTGTCCACAATGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVICAPAV*CPQCGV Trigger: AACGCCACATTGTGGACACCAGACAGCAGGAGCACA...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTGTGCTCCTGCTGTCTaGTGTCCACAATGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: HHFTGERLCFRTTMSTAICAPAV*CPQCGV Trigger: AACGCCACATTGTGGACACCAGACAGCAGGAGCACA...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTCATTTACAAGAGTCTTaGCGGTCGCTGTCCGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RKHHFTGERLCFRTTMSTHLQES*RSLSGY Trigger: GTACCCGGACAGCGACCGTCAAGACTCTTGTAAATG...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACAATGAAGTCAGAATaGGCCCCCTGCATGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPTMKSE*APCMIC Trigger: GCAGATCATGCAGGGGGCTCATTCTGACTTCATTGT...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTAGCTCCAGCTCATCGATaGGAGCATCCCGCTGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLAPAHR*EHPAAS Trigger: TGAGGCAGCGGGATGCTCTCATCGATGAGCTGGAGC...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGATCAGTTCGTCCTTCTaGTCCAACTCCAGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLISSSF*SNSSSS Trigger: GCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGAT...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | GTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACTAATTCTCACATCCTCCTCTaGTATTCTTTCAACTTCATC | + |
|
Preference number: 4 (lower is better) Translates to: VVTGAASIKGIMVTPSTNSHILL*YSFNFI Trigger: GATGAAGTTGAAAGAATATCAGAGGAGGATGTGAGA...ATTAGTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGTCCATGTACTCGGTATaGTTGATGAGTCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPNATVVTGAASIKGIMSMYSV*LMSPVL Trigger: GAGGACAGGACTCATCAAGCATACCGAGTACATGGA...CATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGATAAGTCCTTCTCTGAGCGGATGTaGTCCTGCTGTCTGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RFKHKTGKEHYRHLSDKSFSERM*SCCLVS Trigger: GGACACCAGACAGCAGGAGCACATCCGCTCAGAGAA...GGACTTATCGCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGTCTTCACTTTTCAACTaGACCAGCTCTACTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: MNSATHRYVVLVVQYISQSSLFN*TSSTRP Trigger: CGGACGAGTAGAGCTGGTCCAGTTGAAAAGTGAAGA...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCGTTGTCATCAGGTGGTaGCTCATCGCTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: EVFPTLFQNIIRAKQGYRVVIRW*LIAVLR Trigger: CCTGAGGACAGCGATGAGCCACCACCTGATGACAAC...GCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| 3UTR CAA 72 bp | GATATGTGGTCCTCGTTGTACAATATATATCCCAGCTaGCAGTCACAGGCTCTCTACCCCTCTCTTGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: DMWSSLYNIYPS*QSQALYPSLDE Trigger: TTCATCAAGAGAGGGGTAGAGAGCCTGTGACTGCAAGCTGGGATATATATTGTACAACGAGGACCACATATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCTGGAAAGTTGTGCCACTTAATAATAGTGGCCAACTGGCCTGCCAACAACCTCCAATCAAATGCTTaGAAGAGTCTCTGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: TSGKLCHLIIVANWPANNLQSNA*KSLCQS Trigger: TGATTGACAGAGACTCTTTCAAGCATTTGATTGGAG...GTTGTTGGCAGGCCAGTTGGCCACTATTATTAAGTGGCACAACTTTCCAGAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR TCA 90 bp | GGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAACAATGAAGTCAGAATaGGCCCCCTGCATGATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GQCLEPIRKKRYHSVLSSTMKSE*APCMIC Trigger: GCAGATCATGCAGGGGGCTCATTCTGACTTCATTGT...TGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGGTAAAACCTGGTTGTTaGGTCTTCAAACGAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: MNSATHRYVVLVVQYISQVKPGC*VFKRTP Trigger: AGGGGTTCGTTTGAAGACTCAACAACCAGGTTTTAC...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | ATAAGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTAAAACCTGGTTGTTaGGTCTTCAAACGAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: ISPNATVVTGAASIKGIMVKPGC*VFKRTP Trigger: AGGGGTTCGTTTGAAGACTCAACAACCAGGTTTTAC...CATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCAACTTCCAGGACCCATGGTaGAGAGCTTCACGCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VFPTLFQNIIRAKQGYRNFQDPW*RASRLL Trigger: AAGAAGGCGTGAAGCTCTGCACCATGGGTCCTGGAA...GTTGCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | AGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTCTATTCTCACATCCTCCCCCTaGAACGCTTTCTCTCCAAAC | + |
|
Preference number: 4 (lower is better) Translates to: SPGSVPQSSIVPNILFSILTSSP*NAFSPN Trigger: GTTTGGAGAGAAAGCGTTGCAGGGGGAGGATGTGAG...AATAGAGAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTGCGGCAATAACATTTaGTGTTCTCACATCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: HHFTGERLCFRTTMSTAICGNNI*CSHILP Trigger: GGGGAGGATGTGAGAACAGCAAATGTTATTGCCGCA...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSAGDSF*GNNICC Trigger: ACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGC...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVIAGDSF*GNNICC Trigger: ACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGC...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | CCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCTTTTGCTTTTGCTTCTaGGTCCTCATATGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: PNATVVTGAASIKGIMVTFCFCF*VLICFV Trigger: AACAAAGCATATGAGGACGCAGAAGCAAAAGCAAAA...GGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | ATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAGCTCGTGGGAGGTGTCAAGGTaGCTTTTCTTAAGCCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: MFRTDQKEKVPFSLVISSWEVSR*LFLSLP Trigger: GGGAAGGCTTAAGAAAAGGCACCTTGACACCTCCCA...CGAGCTGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTCAGTCCACAATCTCCTaGATCTGTGACAGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RKHHFTGERLCFRTTMSTQSTIS*ICDSSK Trigger: CTTGGAGCTGTCACAGATCCAGGAGATTGTGGACTG...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS-3UTR CCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTTCTTCACTTTTCAACTaGACCAGCTCTACTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: FTGERLCFRTTMSTAILGSSLFN*TSSTRP Trigger: CGGACGAGTAGAGCTGGTCCAGTTGAAAAGTGAAGA...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCCTGGTGTCCACAATGTaGCGTTTCTTGAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVILVSTM*RFLRIF Trigger: GAAGATCCTCAAGAAACGCCACATTGTGGACACCAG...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCCTGGTGTCCACAATGTaGCGTTTCTTGAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVLVSTM*RFLRIF Trigger: GAAGATCCTCAAGAAACGCCACATTGTGGACACCAG...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGCAAAGCAAGGCTATCGCAACAATAGAAAACATCATTTTACTGGTGAAGAGATCCTTCGACTGTaGGCTCTTGGGGTAGAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: IRAKQGYRNNRKHHFTGEEILRL*ALGVEG Trigger: CCCTTCTACCCCAAGAGCCCACAGTCGAAGGATCTC...TTCACCAGTAAAATGATGTTTTCTATTGTTGCGATAGCCTTGCTTTGCTCTGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTTGGGTCTTCACTTGGTaGGTCTTCTCGAGTAACATT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSWVFTW*VFSSNI Trigger: AATGTTACTCGAGAAGACTCACCAAGTGAAGACCCA...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATGTCTATGTCCCAGCCTaGGTTGTCATCAGGTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYVYVPA*VVIRWW Trigger: CCACCACCTGATGACAACTCAGGCTGGGACATAGAC...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTTCTCCTCTTGCACCCTaGCTGATGATATATTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FTGERLCFRTTMSTAILGSPLAP*LMIYSP Trigger: TGGAGAATATATCATCAGGCAGGGTGCAAGAGGAGA...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR GCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCGGAAACTGTCAAAATTaGTTGTGTCTGTGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVIGNCQN*LCLWVT Trigger: CGTCACCCACAGACACAAGCAATTTTGACAGTTTCC...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTGGAAACTGTCAAAATTaGTTGTGTCTGTGGGTGACG | + |
|
Preference number: 4 (lower is better) Translates to: FTGERLCFRTTMSTAILGGNCQN*LCLWVT Trigger: CGTCACCCACAGACACAAGCAATTTTGACAGTTTCC...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTTCACTTTTCAACTaGACCAGCTCTACTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLSSLFN*TSSTRP Trigger: CGGACGAGTAGAGCTGGTCCAGTTGAAAAGTGAAGA...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGCAAAGCAAGGCTATCGCAACAATAGAAAACATCATTTTACTGGTGAATGTGCTCCTGCTGTCTaGTGTCCACAATGTGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: IRAKQGYRNNRKHHFTGECAPAV*CPQCGV Trigger: AACGCCACATTGTGGACACCAGACAGCAGGAGCACA...TTCACCAGTAAAATGATGTTTTCTATTGTTGCGATAGCCTTGCTTTGCTCTGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTGTTCAGGATGATCTCTaGGGCTACATATTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPVQDDL*GYIFWS Trigger: ACTCCAGAATATGTAGCCCCAGAGATCATCCTGAAC...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCGTTCAGGATGATCTCTaGGGCTACATATTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVVQDDL*GYIFWS Trigger: ACTCCAGAATATGTAGCCCCAGAGATCATCCTGAAC...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTAGTTGTCATCAGGTGGTaGCTCATCGCTGTCCTCAGG | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLVVIRW*LIAVLR Trigger: CCTGAGGACAGCGATGAGCCACCACCTGATGACAAC...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | AGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGATAAGTCCGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: RFKHKTGKEHYRHLSDKSAGDSF*GNNICC Trigger: ACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGC...GGACTTATCGCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGTTCTGCGTCCTCATATaGTTTGTTAGAAACATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: ISPNATVVTGAASIKGIMFCVLI*FVRNIV Trigger: GACGATGTTTCTAACAAAGCATATGAGGACGCAGAA...CATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTTTCGGCTTCATATTTTaGTTTTGCTTCTGCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPFGFIF*FCFCVL Trigger: GAGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAA...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTTCGGCTTCATATTTTaGTTTTGCTTCTGCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVFGFIF*FCFCVL Trigger: GAGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAA...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTTGCTTCTACCACACATaGAGTGTAAAACCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSCFYHT*SVKPGC Trigger: ACAACCAGGTTTTACACTGCATGTGTGGTAGAAGCA...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGTCATCAGGAAGGCTCTaGAATGTTGGAACACTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: MNSATHRYVVLVVQYISQSSGRL*NVGTLF Trigger: AAAAAGTGTTCCAACATTCCAGAGCCTTCCTGATGA...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | GGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCACAACACTTGGAATTATaGGAGGTGTCAAGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GQCLEPIRKKRYHSVLSSQHLEL*EVSRCL Trigger: AAGGCACCTTGACACCTCCCATAATTCCAAGTGTTG...TGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | ATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAGCTCGCAACACTTGGAATTATaGGAGGTGTCAAGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: MFRTDQKEKVPFSLVISSQHLEL*EVSRCL Trigger: AAGGCACCTTGACACCTCCCATAATTCCAAGTGTTG...CGAGCTGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTCAACACTTGGAATTATaGGAGGTGTCAAGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: RKHHFTGERLCFRTTMSTQHLEL*EVSRCL Trigger: AAGGCACCTTGACACCTCCCATAATTCCAAGTGTTG...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | GAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTCCAATCAAATGCTTaGAAGAGTCTCTGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: ENIILLVKGFASGPPCQLLQSNA*KSLCQS Trigger: TGATTGACAGAGACTCTTTCAAGCATTTGATTGGAG...CAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCAGTCCTCCAATCAAATaGTTGAAAGAGTCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVSPPIK*LKESLS Trigger: TGACAGAGACTCTTTCAAGCATTTGATTGGAGGACT...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTAGTCCTCCAATCAAATaGTTGAAAGAGTCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSSPPIK*LKESLS Trigger: TGACAGAGACTCTTTCAAGCATTTGATTGGAGGACT...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTCTGCGTCCTCATATaGTTTGTTAGAAACATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: HHFTGERLCFRTTMSTAIFCVLI*FVRNIV Trigger: GACGATGTTTCTAACAAAGCATATGAGGACGCAGAA...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTTCTGCGTCCTCATATaGTTTGTTAGAAACATCGTC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVFCVLI*FVRNIV Trigger: GACGATGTTTCTAACAAAGCATATGAGGACGCAGAA...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | ATAAGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGTTCATATTTTGCTTTTaGTTCTGCGTCCTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ISPNATVVTGAASIKGIMFIFCF*FCVLIC Trigger: GCATATGAGGACGCAGAAGCAAAAGCAAAATATGAA...CATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | GTCTTTGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCCTAAGAATGCAGATAGGCGAATaGTTCTACCACACATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: VFVLSDWTYVFCFGSGLRMQIGE*FYHTCS Trigger: ACTGCATGTGTGGTAGAAGCATTCGCCTATCTGCAT...TCTTAGGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCTGCGGCAATAACATTTaGTGTTCTCACATCCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: EVFPTLFQNIIRAKQGYRCGNNI*CSHILL Trigger: GAGGAGGATGTGAGAACAGCAAATGTTATTGCCGCA...GCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAACATTGTCGATCGATaGCCCAGAGTTTCACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GPMFRTDQKEKVPFSLVINIVDR*PRVSHL Trigger: TAAATGTGAAACTCTGGGCCATCGATCGACAATGTT...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CCA 90 bp | CATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTATGCAGTGTAAAACCTaGTTGTTGAGTCTTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: HHFTGERLCFRTTMSTAIMQCKT*LLSLQT Trigger: CGTTTGAAGACTCAACAACCAGGTTTTACACTGCAT...AATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR TCA 90 bp | GTCTTTGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCCTAAGACAATCCCCCGCAGTATaGTATTGTAGGTTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: VFVLSDWTYVFCFGSGLRQSPAV*YCRFSL Trigger: CAATGAAAACCTACAATATCATACTGCGGGGGATTG...TCTTAGGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAGAC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | CTGTCATTTGGAAATGAAGTGAGGACGATTCCACAGTTTAGAAATTATTCTACATCCATGTACTCGGTATaGTTGATGAGTCCTGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LSFGNEVRTIPQFRNYSTSMYSV*LMSPVL Trigger: GAGGACAGGACTCATCAAGCATACCGAGTACATGGA...TGTAGAATAATTTCTAAACTGTGGAATCGTCCTCACTTCATTTCCAAATGACAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| CDS-3UTR GCA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGTGCGGCAATAACATTTaGTGTTCTCACATCCTCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IVPNILFSILLGSSSKMQCGNNI*CSHILP Trigger: GGGGAGGATGTGAGAACAGCAAATGTTATTGCCGCA...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS-3UTR GCA 90 bp | ATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTTTCATATTTTGCTTTTaGTTCTGCGTCCTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: ILLGSSSKMQTLLLEVFPFIFCF*FCVLIC Trigger: GCATATGAGGACGCAGAAGCAAAAGCAAAATATGAA...AGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCTTCATATTTTGCTTTTaGTTCTGCGTCCTCATATGC | + |
|
Preference number: 4 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVFIFCF*FCVLIC Trigger: GCATATGAGGACGCAGAAGCAAAAGCAAAATATGAA...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | GTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCAACTGCTTCTACCACACATaGAGTGTAAAACCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: VFPTLFQNIIRAKQGYRNCFYHT*SVKPGC Trigger: ACAACCAGGTTTTACACTGCATGTGTGGTAGAAGCA...GTTGCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | ATCAGAGCAAAGCAAGGCTATCGCAACAATAGAAAACATCATTTTACTGGTGAAATGCAGATAGGCGAATaGTTCTACCACACATGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: IRAKQGYRNNRKHHFTGEMQIGE*FYHTCS Trigger: ACTGCATGTGTGGTAGAAGCATTCGCCTATCTGCAT...TTCACCAGTAAAATGATGTTTTCTATTGTTGCGATAGCCTTGCTTTGCTCTGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | GGCTCGTACAAGAACCATACAGTTGTGCTTTTTAAATCAGGGCCAATGTTTAGAAACATTGTCGATCGATaGCCCAGAGTTTCACATTTA | + |
|
Preference number: 4 (lower is better) Translates to: GSYKNHTVVLFKSGPMFRNIVDR*PRVSHL Trigger: TAAATGTGAAACTCTGGGCCATCGATCGACAATGTT...TCTAAACATTGGCCCTGATTTAAAAAGCACAACTGTATGGTTCTTGTACGAGCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS-3UTR CCA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCCTGGTGTCCACAATGTaGCGTTTCTTGAGGATCTTC | + |
|
Preference number: 4 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSLVSTM*RFLRIF Trigger: GAAGATCCTCAAGAAACGCCACATTGTGGACACCAG...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | GGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCAATGCAGTGTAAAACCTaGTTGTTGAGTCTTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: GQCLEPIRKKRYHSVLSSMQCKT*LLSLQT Trigger: CGTTTGAAGACTCAACAACCAGGTTTTACACTGCAT...TGATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTATCCTCGATCTTCTCCTaGAGCGCATACTGTAAATCC | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLSSIFS*SAYCKS Trigger: GGATTTACAGTATGCGCTCCAGGAGAAGATCGAGGA...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
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| CDS-3UTR TCA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGTAAAACCTGGTTGTTaGGTCTTCAAACGAACCCCT | + |
|
Preference number: 4 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSVKPGC*VFKRTP Trigger: AGGGGTTCGTTTGAAGACTCAACAACCAGGTTTTAC...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR GCA 90 bp | GAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCAGTCCTCCAATCAAATaGTTGAAAGAGTCTCTGTCA | + |
|
Preference number: 4 (lower is better) Translates to: EVFPTLFQNIIRAKQGYRSPPIK*LKESLS Trigger: TGACAGAGACTCTTTCAAGCATTTGATTGGAGGACT...GCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GGCTCGTACAAGAACCATACAGTTGTGCTTTTTAAATCAGGGCCAATGTTTAGATTTTGCTTTTGCTTCTaGGTCCTCATATGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: GSYKNHTVVLFKSGPMFRFCFCF*VLICFV Trigger: AACAAAGCATATGAGGACGCAGAAGCAAAAGCAAAA...TCTAAACATTGGCCCTGATTTAAAAAGCACAACTGTATGGTTCTTGTACGAGCC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTAAATCCTATTTTCTTTaGAAAGCCAAAGTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVVLARCRPFYLKCFLHSKSYFL*KAKVNQ Trigger: CTGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTT...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGGTTCAGGATGATCTCTaGGGCTACATATTCTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: IVPNILFSILLGSSSKMQVQDDL*GYIFWS Trigger: ACTCCAGAATATGTAGCCCCAGAGATCATCCTGAAC...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCCAACACTTGGAATTATaGGAGGTGTCAAGGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSQHLEL*EVSRCL Trigger: AAGGCACCTTGACACCTCCCATAATTCCAAGTGTTG...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCAATGTGGCGTTTCTTaGGGATCTTCATTGCAAATG | + |
|
Preference number: 4 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYQCGVS*GSSLQM Trigger: CATTTGCAATGAAGATCCTCAAGAAACGCCACATTG...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR TCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTACAATCCCCCGCAGTATaGTATTGTAGGTTTTCATTG | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLQSPAV*YCRFSL Trigger: CAATGAAAACCTACAATATCATACTGCGGGGGATTG...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCTGCTTCTACCACACATaGAGTGTAAAACCTGGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSCFYHT*SVKPGC Trigger: ACAACCAGGTTTTACACTGCATGTGTGGTAGAAGCA...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| 3UTR CAA 72 bp | CATCTATCGTACCAAATATATTATTCTCTATTCTCCTaGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTG | + |
|
Preference number: 4 (lower is better) Translates to: HLSYQIYYSLFS*VVLARCRPFYL Trigger: CAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGATAGATG 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| 3UTR CAA 72 bp | AAGCTCCTTAGTACAGTCAAGTCTGAACACTTGTCTTaGTGCTTTCAGACTGGACATATGTATTTTGTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLLSTVKSEHLS*CFQTGHMYFVL Trigger: CAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAGACAAGTGTTCAGACTTGACTGTACTAAGGAGCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| 3UTR CAA 72 bp | TCAACAAAGCTCCTTAGTACAGTCAAGTCTGAACACTaGTCTTTGTGCTTTCAGACTGGACATATGTATTTT | + |
|
Preference number: 4 (lower is better) Translates to: STKLLSTVKSEH*SLCFQTGHMYF Trigger: AAAATACATATGTCCAGTCTGAAAGCACAAAGACAAGTGTTCAGACTTGACTGTACTAAGGAGCTTTGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR TCA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGCTCCAATCAAATGCTTaGAAGAGTCTCTGTCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: IVPNILFSILLGSSSKMQLQSNA*KSLCQS Trigger: TGATTGACAGAGACTCTTTCAAGCATTTGATTGGAG...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCAAATCCTATTTTCTTTaGAAAGCCAAAGTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: EVFPTLFQNIIRAKQGYRKSYFL*KAKVNQ Trigger: CTGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTT...GCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | CTGTCATTTGGAAATGAAGTGAGGACGATTCCACAGTTTAGAAATTATTCTACAATGCAGTGTAAAACCTaGTTGTTGAGTCTTCAAACG | + |
|
Preference number: 4 (lower is better) Translates to: LSFGNEVRTIPQFRNYSTMQCKT*LLSLQT Trigger: CGTTTGAAGACTCAACAACCAGGTTTTACACTGCAT...TGTAGAATAATTTCTAAACTGTGGAATCGTCCTCACTTCATTTCCAAATGACAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATTTTTGCTTTTGCTTCTaGGTCCTCATATGCTTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYFCFCF*VLICFV Trigger: AACAAAGCATATGAGGACGCAGAAGCAAAAGCAAAA...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 36% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CCA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTATTTCAACTTCATCACTaGAATCTTCATCATCGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NILFSILLGSSSKMQTLLFQLHH*NLHHRC Trigger: ACAGCGATGATGAAGATTCCAGTGATGAAGTTGAAA...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239061.2 |
||
| 3UTR CAA 72 bp | ATGGAAGATAGAGTTCACCTTTATCTTGTGATTGTGTaGGGCATTCTAACTAATACTGTGGATGAAATGAAC | + |
|
Preference number: 4 (lower is better) Translates to: MEDRVHLYLVIV*GILTNTVDEMN Trigger: GTTCATTTCATCCACAGTATTAGTTAGAATGCCCAACACAATCACAAGATAAAGGTGAACTCTATCTTCCAT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR GCA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATAAATCCTATTTTCTTTaGAAAGCCAAAGTCAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYKSYFL*KAKVNQ Trigger: CTGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTT...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS GCA 90 bp | GGCGCAGGTCGTGGAAGGACCTGTAGGTCTGCGGCTCCGCGGAGATaGCCTGCGCCCGGGTGGTCCGCGGGCCGATGTGGGTGGAGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: GAGRGRTCRSAAPRR*PAPGWSAGRCGWRA Trigger: TGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTCCGCGGAGCCGCAGACCTACAGGTCCTTCCACGACCTGCGCC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS GCA 90 bp | CCGCGGAGATCGCCTGGCGCTTGGTGCGCGGTTCACCCTGCAAGGTaGTGGCGCTCTGCTTCTGCGCCTGCTGGGTGGCCGGCCGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRRSPGAWCAVHPAR*WRSASAPAGWPAGS Trigger: TGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | GGCTCCGCGGAGATGCCCTGCGCCCGGGTGGTCCGCGGGCCGATGTaGGTGGAGGGCACCGGCAGCACCGACTGGCATTTGTGGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GSAEMPCARVVRGPM*VEGTGSTDWHLWSF Trigger: GAAACTCCACAAATGCCAGTCGGTGCTGCCGGTGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTCCGCGGAGCC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS CCA 90 bp | CGGAGATCGCCTGGCGCTTGGTGCGCGGTTCACCCTGCAAGGTGCTaGCGCTCTGCTTCTGCGCCTGCTGGGTGGCCGGCCGGATCACCG | + |
|
Preference number: 5 (lower is better) Translates to: RRSPGAWCAVHPARC*RSASAPAGWPAGSP Trigger: CGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 90 bp | GCCTGGCGCTTGGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTaGTTCTGCGCCTGCTGGGTGGCCGGCCGGATCACCGAGCGATAC | + |
|
Preference number: 5 (lower is better) Translates to: AWRLVRGSPCKVLAL*FCACWVAGRITERY Trigger: GTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGC 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | CCGCGGAGATGCCCTGCGCCCGGGTGGTCCGCGGGCCGATGTGGGTaGAGGGCACCGGCAGCACCGACTGGCATTTGTGGAGTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PRRCPAPGWSAGRCG*RAPAAPTGICGVSS Trigger: AGAGGAAACTCCACAAATGCCAGTCGGTGCTGCCGGTGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTCCGCGG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS GCA 90 bp | GGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTTGGTaGGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: GCRRRWAPRRSPGAW*AVHPARCWRSASAP Trigger: AGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCC 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | CCTGGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTTaGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: PGCRRRWAPRRSPGA*CAVHPARCWRSASA Trigger: CGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCCAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | CTGAGATCCTGGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCTaGCGCTTGGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LRSWMSKAVGSAEIA*RLVRGSPCKVLALC Trigger: GCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCCAGGATCTCAG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 90 bp | GTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCTaGTGGGTGGCCGGCCGGATCACCGAGCGATACTTGTCCAGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VRGSPCKVLALCFCA*WVAGRITERYLSSS Trigger: CGAACTGGACAAGTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | CGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCTGCTaGGTGGCCGGCCGGATCACCGAGCGATACTTGTCCAGTTCGTTC | + |
|
Preference number: 5 (lower is better) Translates to: RGSPCKVLALCFCAC*VAGRITERYLSSSF Trigger: GAACGAACTGGACAAGTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS TCA 90 bp | CCTTCGACTGTGGGCTCTTGGGGTAGAAGGGCAGGGTCACGTGGCTaGGATCCTGGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PSTVGSWGRRAGSRG*DPGCRRRWAPRRSP Trigger: AGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCCAGGATCTCAGCCACGTGACCCTGCCCTTCTACCCCAAGAGCCCACAGTCGAAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | GTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCTGCTGGGTaGCCGGCCGGATCACCGAGCGATACTTGTCCAGTTCGTTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VHPARCWRSASAPAG*PAGSPSDTCPVRSA Trigger: TGCAGAACGAACTGGACAAGTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS TCA 90 bp | TACTTGTCCAGTTCGTTCTGCAGCTTCTGGATCAGTTCGTCCTTCTaGTCCAACTCCAGCTCCAGCTCATCGATGAGAGCATCCCGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLSSSFCSFWISSSF*SNSSSSSSMRASRC Trigger: GCAGCGGGATGCTCTCATCGATGAGCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGATCCAGAAGCTGCAGAACGAACTGGACAAGTA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | GGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCATCGAGATCGCCTGGCGCTaGGTGCGCGGTTCACCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: GPMFRTDQKEKVPFSLVIEIAWR*VRGSPC Trigger: GCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTC...GATGACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | GTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACTAATTCAGACAGCTTCAGGTaGGCGAAGAAGGCAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: VVTGAASIKGIMVTPSTNSDSFR*AKKAAS Trigger: CGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGA...ATTAGTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS TCA 90 bp | TTGCTGTCTTTAAATGTCCTGTACAGCCTCACAATGAAGTCAGAATaGGCCCCCTGCATGATCTGCTTCTCTGAGCGGATGTGCTCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: LLSLNVLYSLTMKSE*APCMICFSERMCSC Trigger: GCAGGAGCACATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCTGACTTCATTGTGAGGCTGTACAGGACATTTAAAGACAGCAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS GCA 90 bp | ATGCTTGAAAGAGTCTCTGTCAATCACAAGGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGTTCTCACATCCTCCCCCTGCAACGC | + |
|
Preference number: 5 (lower is better) Translates to: MLERVSVNHKAGDSF*GNNICCSHILPLQR Trigger: GCGTTGCAGGGGGAGGATGTGAGAACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGCCTTGTGATTGACAGAGACTCTTTCAAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | CACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGACCCCGAGCACTGTAAAACCTGGTTGTaGAGTCTTCAAACGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HCSYWSSIDQRHHGDPEHCKTWL*SLQTNP Trigger: GGGGTTCGTTTGAAGACTCAACAACCAGGTTTTACA...GTGCTCGGGGTCACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS TCA 90 bp | GCCGTATTCCACGGGGTACATACAGTCCACAATCTCCTGGATCTGTaGCAGCTCCAAGTTCTTCATGAAGTCATTGTCAAGGATAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: AVFHGVHTVHNLLDL*QLQVLHEVIVKDSL Trigger: GAGGCTATCCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGTGGACTGTATGTACCCCGTGGAATACGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS CCA 90 bp | CTGTCCTTGCCGTATTCCACGGGGTACATACAGTCCACAATCTCCTaGATCTGTGACAGCTCCAAGTTCTTCATGAAGTCATTGTCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLPYSTGYIQSTIS*ICDSSKFFMKSLSR Trigger: CCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGTGGACTGTATGTACCCCGTGGAATACGGCAAGGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | TTGAGTCTCTGGCTAGACATGATGATTAGAATCTGTGTCGTCCACTCAGACACTTCAGACAGCTTCAGGTaGGCGAAGAAGGCAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLWLDMMIRICVVHSDTSDSFR*AKKAAS Trigger: CGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGA...AGTGTCTGAGTGGACGACACAGATTCTAATCATCATGTCTAGCCAGAGACTCAA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | ATGGTGACCCCGAGCACTAATCTTCTCTCTTTCCCTCAGGTTTGCTGGCAGCTGCAAATCCTATTTTCTTaGCAAAGCCAAAGTCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: MVTPSTNLLSFPQVCWQLQILFS*QSQSQP Trigger: TGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTTG...CAGCTGCCAGCAAACCTGAGGGAAAGAGAGAAGATTAGTGCTCGGGGTCACCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS TCA 90 bp | CTCCATTTTCATAGTGGGTCTCTTCGAGGACATCAGCCAGCTTGCTaGGGATTTCATCAGGAAGGCTCTGGAATGTTGGAACACTTTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LHFHSGSLRGHQPAC*GFHQEGSGMLEHFL Trigger: TAAAAAGTGTTCCAACATTCCAGAGCCTTCCTGATGAAATCCTCAGCAAGCTGGCTGATGTCCTCGAAGAGACCCACTATGAAAATGGAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | AGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGGTGTATTGTTTGAAAACATaGTCGATCGATGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPNATVVTGAASIKGIMVYCLKT*SIDGPE Trigger: CTCTGGGCCATCGATCGACAATGTTTTCAAACAATA...CACCATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS TCA 90 bp | AGCGGATGTGCTCCTGCTGTCTGGTGTCCACAATGTGGCGTTTCTTaGGGATCTTCATTGCAAATGTTTTGGATTCTTCACTTTTCAACT | + |
|
Preference number: 5 (lower is better) Translates to: SGCAPAVWCPQCGVS*GSSLQMFWILHFST Trigger: AGTTGAAAAGTGAAGAATCCAAAACATTTGCAATGAAGATCCTCAAGAAACGCCACATTGTGGACACCAGACAGCAGGAGCACATCCGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS GCA 90 bp | AACATTCACCTGCCCTTTACTGATGATGAAGAAGGTGTCTCCTCTTaGACCCTGCCTGATGATATATTCTCCATTTTCATAGTGGGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: NIHLPFTDDEEGVSS*TLPDDIFSIFIVGL Trigger: GAGACCCACTATGAAAATGGAGAATATATCATCAGGCAGGGTGCAAGAGGAGACACCTTCTTCATCATCAGTAAAGGGCAGGTGAATGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | GTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCAACAGCACCGACTGGCATTaGTGGAGTTTCCTCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: VFPTLFQNIIRAKQGYRNSTDWH*WSFLFS Trigger: GCTGAAGAGGAAACTCCACAAATGCCAGTCGGTGCT...GTTGCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CAA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCAGGACATCAGCCAGCTaGCTGAGGATTTCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: ECSPGSVPQSSIVPNILFRTSAS*LRISSG Trigger: TCCTGATGAAATCCTCAGCAAGCTGGCTGATGTCCT...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | ATAAGTCCTAATGCCACTGTAGTTACTGGAGCAGCATCGATCAAAGGCATCATGAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ISPNATVVTGAASIKGIMNCQNC*CLWVTQ Trigger: TTGCGTCACCCACAGACACAAGCAATTTTGACAGTT...CATGATGCCTTTGATCGATGCTGCTCCAGTAACTACAGTGGCATTAGGACTTAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGTCTCTGGCTAGACATGATGATTAGAATCTGTGTCGTCCACTCAGACACTAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: LSLWLDMMIRICVVHSDTNCQNC*CLWVTQ Trigger: TTGCGTCACCCACAGACACAAGCAATTTTGACAGTT...AGTGTCTGAGTGGACGACACAGATTCTAATCATCATGTCTAGCCAGAGACTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTCGGGAAACTGTCAAAATaGCTTGTGTCTGTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SGPMFRTDQKEKVPFSLVGKLSK*LVSVGD Trigger: GTCACCCACAGACACAAGCAATTTTGACAGTTTCCC...GACAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | TTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCTATTTTAGGTGGGAAACTGTCAAAATaGCTTGTGTCTGTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: FTGERLCFRTTMSTAILGGKLSK*LVSVGD Trigger: GTCACCCACAGACACAAGCAATTTTGACAGTTTCCC...ACCTAAAATAGCAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
||
| CDS TCA 90 bp | TTGCAATCTTCTTTGGAAATTCTATCATGTCAATCCCCCGCAGTATaGTATTGTAGGTTTTCATTGGATCTGGGCCTGAGAAAGGTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LQSSLEILSCQSPAV*YCRFSLDLGLRKVG Trigger: GCCCACCTTTCTCAGGCCCAGATCCAATGAAAACCTACAATATCATACTGCGGGGGATTGACATGATAGAATTTCCAAAGAAGATTGCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTTGATCCTCTCCTCCTaGAGCATGAGAATCTTCGCA | + |
|
Preference number: 5 (lower is better) Translates to: ECSPGSVPQSSIVPNILFLILSS*SMRIFA Trigger: TGCGAAGATTCTCATGCTCAAGGAGGAGAGGATCAA...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CAA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTATCAGACAGCTTCAGGTaGGCGAAGAAGGCAGCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: NILFSILLGSSSKMQTLLSDSFR*AKKAAS Trigger: CGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGA...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | ATCAGAGCAAAGCAAGGCTATCGCAACAATAGAAAACATCATTTTACTGGTGAAACATTTACAAGAGTCTaGACGGTCGCTGTCCGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IRAKQGYRNNRKHHFTGETFTRV*TVAVRV Trigger: TACCCGGACAGCGACCGTCAAGACTCTTGTAAATGT...TTCACCAGTAAAATGATGTTTTCTATTGTTGCGATAGCCTTGCTTTGCTCTGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCGCGTCCTCATATGCTTaGTTAGAAACATCGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: ECSPGSVPQSSIVPNILFASSYA*LETSSS Trigger: ACTGGACGATGTTTCTAACAAAGCATATGAGGACGC...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | AGAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCGTCCTCATATGCTTaGTTAGAAACATCGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: RKHHFTGERLCFRTTMSTASSYA*LETSSS Trigger: ACTGGACGATGTTTCTAACAAAGCATATGAGGACGC...AGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCCTTCGGCTTCATATTTaGCTTTTGCTTCTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: ECSPGSVPQSSIVPNILFLRLHI*LLLLRP Trigger: AGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAAG...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTGTAAAACCTGGTTGTaGAGTCTTCAAACGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLCKTWL*SLQTNP Trigger: GGGGTTCGTTTGAAGACTCAACAACCAGGTTTTACA...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | GAAAACATCATTTTACTGGTGAAAGGCTTTGCTTCAGGACCACCATGTCAACTGCAGTGTAAAACCTGGTaGTTGAGTCTTCAAACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ENIILLVKGFASGPPCQLQCKTW*LSLQTN Trigger: GTTCGTTTGAAGACTCAACAACCAGGTTTTACACTG...CAGTTGACATGGTGGTCCTGAAGCAAAGCCTTTCACCAGTAAAATGATGTTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | CCCCTTCTTACTCTGATAAACTTCTCTAGGGAACAGCCCTCTACTCCTGGTTTTCAAATCCTATTTTCTTaGCAAAGCCAAAGTCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: PLLTLINFSREQPSTPGFQILFS*QSQSQP Trigger: TGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTTG...AAAACCAGGAGTAGAGGGCTGTTCCCTAGAGAAGTTTATCAGAGTAAGAAGGGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CAA 90 bp | TTGGTAGTTCTAGCAAGATGCAGACCCTTCTACTTGAAGTGTTTCCTACACTCTTATTGTAGGTTTTCATaGGATCTGGGCCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LVVLARCRPFYLKCFLHSYCRFS*DLGLRK Trigger: CTTTCTCAGGCCCAGATCCAATGAAAACCTACAATA...AGAGTGTAGGAAACACTTCAAGTAGAAGGGTCTGCATCTTGCTAGAACTACCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLNCQNC*CLWVTQ Trigger: TTGCGTCACCCACAGACACAAGCAATTTTGACAGTT...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTCTATTGGGAAACTGTCAAAATaGCTTGTGTCTGTGGGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVPQSSIVPNILFSIGKLSK*LVSVGD Trigger: GTCACCCACAGACACAAGCAATTTTGACAGTTTCCC...AATAGAGAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCAGGACATCAGCCAGCTaGCTGAGGATTTCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSRTSAS*LRISSG Trigger: TCCTGATGAAATCCTCAGCAAGCTGGCTGATGTCCT...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | AGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCGATAAGTCCCTTCGGCTTCATATTTaGCTTTTGCTTCTGCGTCCT | + |
|
Preference number: 5 (lower is better) Translates to: RFKHKTGKEHYRHLSDKSLRLHI*LLLLRP Trigger: AGGACGCAGAAGCAAAAGCAAAATATGAAGCCGAAG...GGACTTATCGCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | ATGAACTCTGCGACCCACAGATATGTGGTCCTCGTTGTACAATATATATCCCAGCAAATCCTATTTTCTTaGCAAAGCCAAAGTCAACCA | + |
|
Preference number: 5 (lower is better) Translates to: MNSATHRYVVLVVQYISQQILFS*QSQSQP Trigger: TGGTTGACTTTGGCTTTGCAAAGAAAATAGGATTTG...CTGGGATATATATTGTACAACGAGGACCACATATCTGTGGGTCGCAGAGTTCAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
||
| CDS-3UTR CAA 90 bp | GAATGTAGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTATTGTAGGTTTTCATaGGATCTGGGCCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: ECSPGSVPQSSIVPNILFYCRFS*DLGLRK Trigger: CTTTCTCAGGCCCAGATCCAATGAAAACCTACAATA...GAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCTACATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS TCA 90 bp | ATGTACTCGGTATGCTTGATGAGTCCTGTCCTCATCATTATTGTTTaGAAACATTGTCGATCGATGGCCCAGAGTTTCACATTTACAAGA | + |
|
Preference number: 5 (lower is better) Translates to: MYSVCLMSPVLIIIV*KHCRSMAQSFTFTR Trigger: TCTTGTAAATGTGAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATACCGAGTACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | AATCAGGGCCAATGTTTAGAACCGATCAGAAAGAAAAGGTACCATTCAGTCTTGTTCTTCATGAAGTCATaGTCAAGGATAGCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NQGQCLEPIRKKRYHSVLFFMKS*SRIASF Trigger: AAAGGAGGCTATCCTTGACAATGACTTCATGAAGAA...CAAGACTGAATGGTACCTTTTCTTTCTGATCGGTTCTAAACATTGGCCCTGATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | AGCCCAGGTTCCGTACCACAGTCATCTATCGTACCAAATATATTATTCTCTATTTATTGTTTGAAAACATaGTCGATCGATGGCCCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SPGSVPQSSIVPNILFSIYCLKT*SIDGPE Trigger: CTCTGGGCCATCGATCGACAATGTTTTCAAACAATA...AATAGAGAATAATATATTTGGTACGATAGATGACTGTGGTACGGAACCTGGGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | TGCTATTTTAGGTTCAAACATAAAACAGGTAAAGAGCACTATCGTCATCTAAGCATGTACTCGGTATGCTaGATGAGTCCTGTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: CYFRFKHKTGKEHYRHLSMYSVC*MSPVLI Trigger: GATGAGGACAGGACTCATCAAGCATACCGAGTACAT...GCTTAGATGACGATAGTGCTCTTTACCTGTTTTATGTTTGAACCTAAAATAGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGATGTACTCGGTATGCTaGATGAGTCCTGTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: IVPNILFSILLGSSSKMQMYSVC*MSPVLI Trigger: GATGAGGACAGGACTCATCAAGCATACCGAGTACAT...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS-3UTR CAA 90 bp | CACCTTTATCTTGTGATTGTGTTGGGCATTCTAACTAATACTGTGGATGAAATGTGTAAAACCTGGTTGTaGAGTCTTCAAACGAACCCC | + |
|
Preference number: 5 (lower is better) Translates to: HLYLVIVLGILTNTVDEMCKTWL*SLQTNP Trigger: GGGGTTCGTTTGAAGACTCAACAACCAGGTTTTACA...CATTTCATCCACAGTATTAGTTAGAATGCCCAACACAATCACAAGATAAAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CAA 90 bp | GAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATCGCCAGTGTAAAACCTGGTaGTTGAGTCTTCAAACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: EVFPTLFQNIIRAKQGYRQCKTW*LSLQTN Trigger: GTTCGTTTGAAGACTCAACAACCAGGTTTTACACTG...GCGATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CAA 90 bp | CTTTGTGCTTTCAGACTGGACATATGTATTTTGTTTTGGTTCAGGCCTAAGACACAGTGTAAAACCTGGTaGTTGAGTCTTCAAACGAAC | + |
|
Preference number: 5 (lower is better) Translates to: LCAFRLDICILFWFRPKTQCKTW*LSLQTN Trigger: GTTCGTTTGAAGACTCAACAACCAGGTTTTACACTG...TGTCTTAGGCCTGAACCAAAACAAAATACATATGTCCAGTCTGAAAGCACAAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000239061.2 |
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| CDS-3UTR CAA 90 bp | CACCTTTATCTTGTGATTGTGTTGGGCATTCTAACTAATACTGTGGATGAAATGAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HLYLVIVLGILTNTVDEMNCQNC*CLWVTQ Trigger: TTGCGTCACCCACAGACACAAGCAATTTTGACAGTT...CATTTCATCCACAGTATTAGTTAGAATGCCCAACACAATCACAAGATAAAGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS-3UTR CAA 90 bp | ATCGTACCAAATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGGCGTCCTCATATGCTTaGTTAGAAACATCGTCCAGT | + |
|
Preference number: 5 (lower is better) Translates to: IVPNILFSILLGSSSKMQASSYA*LETSSS Trigger: ACTGGACGATGTTTCTAACAAAGCATATGAGGACGC...CTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATTTGGTACGAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CAA 90 bp | CTTGAAGTGTTTCCTACACTCTTTCAAAATATAATCAGAGCAAAGCAAGGCTATTATTGTAGGTTTTCATaGGATCTGGGCCTGAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: LEVFPTLFQNIIRAKQGYYCRFS*DLGLRK Trigger: CTTTCTCAGGCCCAGATCCAATGAAAACCTACAATA...ATAGCCTTGCTTTGCTCTGATTATATTTTGAAAGAGTGTAGGAAACACTTCAAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS-3UTR CAA 90 bp | AATATATTATTCTCTATTCTCCTTGGTAGTTCTAGCAAGATGCAGACCCTTCTATTCTTCATGAAGTCATaGTCAAGGATAGCCTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NILFSILLGSSSKMQTLLFFMKS*SRIASF Trigger: AAAGGAGGCTATCCTTGACAATGACTTCATGAAGAA...TAGAAGGGTCTGCATCTTGCTAGAACTACCAAGGAGAATAGAGAATAATATATT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS GCA 72 bp | CGTGGAAGGACCTGTAGGTCTGCGGCTCCGCGGAGATaGCCTGCGCCCGGGTGGTCCGCGGGCCGATGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: RGRTCRSAAPRR*PAPGWSAGRCG Trigger: CCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTCCGCGGAGCCGCAGACCTACAGGTCCTTCCACG 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| CDS CCA 72 bp | TGCCCTGCGCCCGGGTGGTCCGCGGGCCGATGTGGGTaGAGGGCACCGGCAGCACCGACTGGCATTTGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: CPAPGWSAGRCG*RAPAAPTGICG Trigger: TCCACAAATGCCAGTCGGTGCTGCCGGTGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCA 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS CCA 72 bp | GAGATGCCCTGCGCCCGGGTGGTCCGCGGGCCGATGTaGGTGGAGGGCACCGGCAGCACCGACTGGCATTTG | + |
|
Preference number: 6 (lower is better) Translates to: EMPCARVVRGPM*VEGTGSTDWHL Trigger: CAAATGCCAGTCGGTGCTGCCGGTGCCCTCCACCCACATCGGCCCGCGGACCACCCGGGCGCAGGGCATCTC 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
||
| CDS CCA 72 bp | CCTGGCGCTTGGTGCGCGGTTCACCCTGCAAGGTGCTaGCGCTCTGCTTCTGCGCCTGCTGGGTGGCCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: PGAWCAVHPARC*RSASAPAGWPA Trigger: GGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 72 bp | TCGCCTGGCGCTTGGTGCGCGGTTCACCCTGCAAGGTaGTGGCGCTCTGCTTCTGCGCCTGCTGGGTGGCCG | + |
|
Preference number: 6 (lower is better) Translates to: SPGAWCAVHPAR*WRSASAPAGWP Trigger: CGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 72 bp | AGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTTGGTaGGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RRWAPRRSPGAW*AVHPARCWRSA Trigger: AGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCT 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 72 bp | CGAAGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTTaGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: RRRWAPRRSPGA*CAVHPARCWRS Trigger: AGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CAA 72 bp | TCGAAGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTaGGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SKAVGSAEIAWR*VRGSPCKVLAL Trigger: GAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 72 bp | TTGGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTaGTTCTGCGCCTGCTGGGTGGCCGGCCGGATCACC | + |
|
Preference number: 6 (lower is better) Translates to: LVRGSPCKVLAL*FCACWVAGRIT Trigger: GGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CAA 90 bp | TCCTGGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCTGGCGCTaGGTGCGCGGTTCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SWMSKAVGSAEIAWR*VRGSPCKVLALCFC Trigger: GCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCCAGGA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 72 bp | CCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCTGCTaGGTGGCCGGCCGGATCACCGAGCGATACTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: PCKVLALCFCAC*VAGRITERYLS Trigger: GGACAAGTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CCA 72 bp | TGGATGTCGAAGGCGGTGGGCTCCGCGGAGATCGCCTaGCGCTTGGTGCGCGGTTCACCCTGCAAGGTGCTG | + |
|
Preference number: 6 (lower is better) Translates to: WMSKAVGSAEIA*RLVRGSPCKVL Trigger: CAGCACCTTGCAGGGTGAACCGCGCACCAAGCGCCAGGCGATCTCCGCGGAGCCCACCGCCTTCGACATCCA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 72 bp | TCACCCTGCAAGGTGCTGGCGCTCTGCTTCTGCGCCTaGTGGGTGGCCGGCCGGATCACCGAGCGATACTTG | + |
|
Preference number: 6 (lower is better) Translates to: SPCKVLALCFCA*WVAGRITERYL Trigger: CAAGTATCGCTCGGTGATCCGGCCGGCCACCCAGCAGGCGCAGAAGCAGAGCGCCAGCACCTTGCAGGGTGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS GCA 72 bp | AACTCCAGCTCCAGCTCATCGATGAGAGCATCCCGCTaGCTCAGCTCCTCGATCTTCTCCTGGAGCGCATAC | + |
|
Preference number: 6 (lower is better) Translates to: NSSSSSSMRASR*LSSSIFSWSAY Trigger: GTATGCGCTCCAGGAGAAGATCGAGGAGCTGAGGCAGCGGGATGCTCTCATCGATGAGCTGGAGCTGGAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
||
| CDS CAA 72 bp | GACCCCACATCGCCTTCCTTGATGATGCAGCTGTCCTaGCCGTATTCCACGGGGTACATACAGTCCACAATC | + |
|
Preference number: 6 (lower is better) Translates to: DPTSPSLMMQLS*PYSTGYIQSTI Trigger: GATTGTGGACTGTATGTACCCCGTGGAATACGGCAAGGACAGCTGCATCATCAAGGAAGGCGATGTGGGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS CAA 90 bp | TACACCAGTGACCCCACATCGCCTTCCTTGATGATGCAGCTGTCCTaGCCGTATTCCACGGGGTACATACAGTCCACAATCTCCTGGATC | + |
|
Preference number: 6 (lower is better) Translates to: YTSDPTSPSLMMQLS*PYSTGYIQSTISWI Trigger: GATCCAGGAGATTGTGGACTGTATGTACCCCGTGGAATACGGCAAGGACAGCTGCATCATCAAGGAAGGCGATGTGGGGTCACTGGTGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS CAA 90 bp | TTCCCATCTTCCATGACGTACACCAGTGACCCCACATCGCCTTCCTaGATGATGCAGCTGTCCTTGCCGTATTCCACGGGGTACATACAG | + |
|
Preference number: 6 (lower is better) Translates to: FPSSMTYTSDPTSPS*MMQLSLPYSTGYIQ Trigger: CTGTATGTACCCCGTGGAATACGGCAAGGACAGCTGCATCATCAAGGAAGGCGATGTGGGGTCACTGGTGTACGTCATGGAAGATGGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
||
| CDS TCA 72 bp | GACTTCAACCTTCCCATCTTCCATGACGTACACCAGTaGCCCCACATCGCCTTCCTTGATGATGCAGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: DFNLPIFHDVHQ*PHIAFLDDAAV Trigger: GACAGCTGCATCATCAAGGAAGGCGATGTGGGGTCACTGGTGTACGTCATGGAAGATGGGAAGGTTGAAGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS GCA 72 bp | CACAAGGCAGGTGACAGCTTCTGCGGCAATAACATTTaGTGTTCTCACATCCTCCCCCTGCAACGCTTTCTC | + |
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Preference number: 6 (lower is better) Translates to: HKAGDSFCGNNI*CSHILPLQRFL Trigger: GAGAAAGCGTTGCAGGGGGAGGATGTGAGAACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGCCTTGTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS CAA 90 bp | AGCTCTACTCGTCCGAAACCTCCAACTCCAAGGGTGTCAATGATGTaGAAATCAGACAGCTTCAGGTTGGCGAAGAAGGCAGCTTCGGCT | + |
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Preference number: 6 (lower is better) Translates to: SSTRPKPPTPRVSMM*KSDSFRLAKKAASA Trigger: AGCCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGATTTCAACATCATTGACACCCTTGGAGTTGGAGGTTTCGGACGAGTAGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 90 bp | CAGGTGGTGGCTCATCGCTGTCCTCAGGGAAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAACACTTGGAATTATGGGAGGTGTCA | + |
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Preference number: 6 (lower is better) Translates to: QVVAHRCPQGNCQNC*CLWVTQHLELWEVS Trigger: TGACACCTCCCATAATTCCAAGTGTTGCGTCACCCACAGACACAAGCAATTTTGACAGTTTCCCTGAGGACAGCGATGAGCCACCACCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| CDS TCA 72 bp | AGTTCGTTCTGCAGCTTCTGGATCAGTTCGTCCTTCTaGTCCAACTCCAGCTCCAGCTCATCGATGAGAGCA | + |
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Preference number: 6 (lower is better) Translates to: SSFCSFWISSSF*SNSSSSSSMRA Trigger: TGCTCTCATCGATGAGCTGGAGCTGGAGTTGGATCAGAAGGACGAACTGATCCAGAAGCTGCAGAACGAACT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
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| CDS GCA 72 bp | AGAGTCTCTGTCAATCACAAGGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGTTCTCACATCCTCCCC | + |
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Preference number: 6 (lower is better) Translates to: RVSVNHKAGDSF*GNNICCSHILP Trigger: GGGGAGGATGTGAGAACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGCCTTGTGATTGACAGAGACTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS TCA 72 bp | TTAAATGTCCTGTACAGCCTCACAATGAAGTCAGAATaGGCCCCCTGCATGATCTGCTTCTCTGAGCGGATG | + |
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Preference number: 6 (lower is better) Translates to: LNVLYSLTMKSE*APCMICFSERM Trigger: CATCCGCTCAGAGAAGCAGATCATGCAGGGGGCTCATTCTGACTTCATTGTGAGGCTGTACAGGACATTTAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS GCA 72 bp | AGAGTCTCTGTCAATCACAAGGCAGGTGACAGCTTCTaGGGCAATAACATTTGCTGTTCTCACATCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: RVSVNHKAGDSF*GNNICCSHILL Trigger: GAGGAGGATGTGAGAACAGCAAATGTTATTGCCGCAGAAGCTGTCACCTGCCTTGTGATTGACAGAGACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239061.2 |
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| CDS CCA 72 bp | CCGTATTCCACGGGGTACATACAGTCCACAATCTCCTaGATCTGTGACAGCTCCAAGTTCTTCATGAAGTCA | + |
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Preference number: 6 (lower is better) Translates to: PYSTGYIQSTIS*ICDSSKFFMKS Trigger: TGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGTGGACTGTATGTACCCCGTGGAATACGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS CCA 72 bp | GAGCGGATGTGCTCCTGCTGTCTGGTGTCCACAATGTaGCGTTTCTTGAGGATCTTCATTGCAAATGTTTTG | + |
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Preference number: 6 (lower is better) Translates to: ERMCSCCLVSTM*RFLRIFIANVL Trigger: CAAAACATTTGCAATGAAGATCCTCAAGAAACGCCACATTGTGGACACCAGACAGCAGGAGCACATCCGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 72 bp | GCTCATCGCTGTCCTCAGGGAAACTGTCAAAATTGCTaGTGTCTGTGGGTGACGCAACACTTGGAATTATGG | + |
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Preference number: 6 (lower is better) Translates to: AHRCPQGNCQNC*CLWVTQHLELW Trigger: CCATAATTCCAAGTGTTGCGTCACCCACAGACACAAGCAATTTTGACAGTTTCCCTGAGGACAGCGATGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000182459.2 ENSMUST00000239061.2 |
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| CDS CAA 90 bp | ACAATCTCCTGGATCTGTGACAGCTCCAAGTTCTTCATGAAGTCATaGTCAAGGATAGCCTCCTTTATGAGATCCTTCGACTGTGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: TISWICDSSKFFMKS*SRIASFMRSFDCGL Trigger: GAGCCCACAGTCGAAGGATCTCATAAAGGAGGCTATCCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000073581.6 |
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| CDS CAA 90 bp | ACAATCTCCTGGATCTGTGACAGCTCCAAGTTCTTCATGAAGTCATaGTCAAGGATAGCCTCCTTTATGAGATCCTTCGACCTCTCGGAT | + |
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Preference number: 6 (lower is better) Translates to: TISWICDSSKFFMKS*SRIASFMRSFDLSD Trigger: ATCCGAGAGGTCGAAGGATCTCATAAAGGAGGCTATCCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCAGGAGATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065067.14 |
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| CDS CAA 90 bp | CCAACTCCAAGGGTGTCAATGATGTTGAAATCAGACAGCTTCAGGTaGGCGAAGAAGGCAGCTTCGGCTTCATATTTTGCTTTTGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: PTPRVSMMLKSDSFR*AKKAASASYFAFAS Trigger: AGAAGCAAAAGCAAAATATGAAGCCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGATTTCAACATCATTGACACCCTTGGAGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS TCA 72 bp | GCTCCTGCTGTCTGGTGTCCACAATGTGGCGTTTCTTaGGGATCTTCATTGCAAATGTTTTGGATTCTTCAC | + |
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Preference number: 6 (lower is better) Translates to: APAVWCPQCGVS*GSSLQMFWILH Trigger: GTGAAGAATCCAAAACATTTGCAATGAAGATCCTCAAGAAACGCCACATTGTGGACACCAGACAGCAGGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS TCA 72 bp | CAGTATGATATTGTAGGTTTTCATTGGATCTGGGCCTaGGAAAGGTGGGCTGCCAGTCAGAAGCTCATACAT | + |
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Preference number: 6 (lower is better) Translates to: QYDIVGFHWIWA*ERWAASQKLIH Trigger: ATGTATGAGCTTCTGACTGGCAGCCCACCTTTCTCAGGCCCAGATCCAATGAAAACCTACAATATCATACTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 72 bp | AGGGTGTCAATGATGTTGAAATCAGACAGCTTCAGGTaGGCGAAGAAGGCAGCTTCGGCTTCATATTTTGCT | + |
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Preference number: 6 (lower is better) Translates to: RVSMMLKSDSFR*AKKAASASYFA Trigger: AGCAAAATATGAAGCCGAAGCTGCCTTCTTCGCCAACCTGAAGCTGTCTGATTTCAACATCATTGACACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 90 bp | CAGAGCTCTCCACCCAGGCACGCTTCCATCAACATATACAAGTATTaGCTGTCTTTAAATGTCCTGTACAGCCTCACAATGAAGTCAGAA | + |
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Preference number: 6 (lower is better) Translates to: QSSPPRHASINIYKY*LSLNVLYSLTMKSE Trigger: TTCTGACTTCATTGTGAGGCTGTACAGGACATTTAAAGACAGCAAATACTTGTATATGTTGATGGAAGCGTGCCTGGGTGGAGAGCTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS TCA 72 bp | TGCTTCTACCACACATGCAGTGTAAAACCTGGTTGTTaGGTCTTCAAACGAACCCCTATCCCTGAGAATAGT | + |
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Preference number: 6 (lower is better) Translates to: CFYHTCSVKPGC*VFKRTPIPENS Trigger: ACTATTCTCAGGGATAGGGGTTCGTTTGAAGACTCAACAACCAGGTTTTACACTGCATGTGTGGTAGAAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 72 bp | TGGATCTGTGACAGCTCCAAGTTCTTCATGAAGTCATaGTCAAGGATAGCCTCCTTTATGAGATCCTTCGAC | + |
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Preference number: 6 (lower is better) Translates to: WICDSSKFFMKS*SRIASFMRSFD Trigger: GTCGAAGGATCTCATAAAGGAGGCTATCCTTGACAATGACTTCATGAAGAACTTGGAGCTGTCACAGATCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS CAA 72 bp | CCACCCAGGCACGCTTCCATCAACATATACAAGTATTaGCTGTCTTTAAATGTCCTGTACAGCCTCACAATG | + |
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Preference number: 6 (lower is better) Translates to: PPRHASINIYKY*LSLNVLYSLTM Trigger: CATTGTGAGGCTGTACAGGACATTTAAAGACAGCAAATACTTGTATATGTTGATGGAAGCGTGCCTGGGTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 90 bp | GTGTCCACAATGTGGCGTTTCTTGAGGATCTTCATTGCAAATGTTTaGGATTCTTCACTTTTCAACTGGACCAGCTCTACTCGTCCGAAA | + |
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Preference number: 6 (lower is better) Translates to: VSTMWRFLRIFIANV*DSSLFNWTSSTRPK Trigger: TTTCGGACGAGTAGAGCTGGTCCAGTTGAAAAGTGAAGAATCCAAAACATTTGCAATGAAGATCCTCAAGAAACGCCACATTGTGGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS GCA 72 bp | CCTGTAAATGATTCCTTTGGAATGCAGATAGGCGAATaGTTCTACCACACATGCAGTGTAAAACCTGGTTGT | + |
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Preference number: 6 (lower is better) Translates to: PVNDSFGMQIGE*FYHTCSVKPGC Trigger: ACAACCAGGTTTTACACTGCATGTGTGGTAGAAGCATTCGCCTATCTGCATTCCAAAGGAATCATTTACAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 72 bp | GGTATGCTTGATGAGTCCTGTCCTCATCATTATTGTTaGAAAACATTGTCGATCGATGGCCCAGAGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: GMLDESCPHHYC*KTLSIDGPEFH Trigger: GTGAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS TCA 72 bp | GTATGCTTGATGAGTCCTGTCCTCATCATTATTGTTTaGAAACATTGTCGATCGATGGCCCAGAGTTTCACA | + |
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Preference number: 6 (lower is better) Translates to: VCLMSPVLIIIV*KHCRSMAQSFT Trigger: TGTGAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS TCA 72 bp | TCTTTGGAAATTCTATCATGTCAATCCCCCGCAGTATaGTATTGTAGGTTTTCATTGGATCTGGGCCTGAGA | + |
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Preference number: 6 (lower is better) Translates to: SLEILSCQSPAV*YCRFSLDLGLR Trigger: TCTCAGGCCCAGATCCAATGAAAACCTACAATATCATACTGCGGGGGATTGACATGATAGAATTTCCAAAGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 ENSMUST00000239061.2 |
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| CDS CAA 90 bp | GGTATGCTTGATGAGTCCTGTCCTCATCATTATTGTTTGAAAACATaGTCGATCGATGGCCCAGAGTTTCACATTTACAAGAGTCTTGAC | + |
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Preference number: 6 (lower is better) Translates to: GMLDESCPHHYCLKT*SIDGPEFHIYKSLD Trigger: GTCAAGACTCTTGTAAATGTGAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATACC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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| CDS CAA 90 bp | CATGTACTCGGTATGCTTGATGAGTCCTGTCCTCATCATTATTGTTaGAAAACATTGTCGATCGATGGCCCAGAGTTTCACATTTACAAG | + |
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Preference number: 6 (lower is better) Translates to: HVLGMLDESCPHHYC*KTLSIDGPEFHIYK Trigger: CTTGTAAATGTGAAACTCTGGGCCATCGATCGACAATGTTTTCAAACAATAATGATGAGGACAGGACTCATCAAGCATACCGAGTACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065067.14 ENSMUST00000073581.6 |
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