Pregenerated sensors for PRKD2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041187Ensembl transcript IDs: ENSMUST00000086104.6, ENSMUST00000168093.9
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CGCAGGAAGCTGCTTCCTCTACAAGAGTTCATTTCTGGGATGATGTaGAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCC | + |
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Preference number: 1 (lower is better) Translates to: RRKLLPLQEFISGMM*RTPKKASCPGGTLA Trigger: GGCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGGAAGCAGCTTCCTGCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CCA 90 bp | CTCCAGTCTGCGCAGGAAGCTGCTTCCTCTACAAGAGTTCATTTCTaGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGG | + |
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Preference number: 1 (lower is better) Translates to: LQSAQEAASSTRVHF*DDVQDSKESKLPRG Trigger: CCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGGAAGCAGCTTCCTGCGCAGACTGGAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR TCA 90 bp | GTCTGCGCAGGAAGCTGCTTCCTCTACAAGAGTTCATTTCTGGGATaGTGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACAC | + |
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Preference number: 1 (lower is better) Translates to: VCAGSCFLYKSSFLG*CAGLQRKQAAQGEH Trigger: GTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGGAAGCAGCTTCCTGCGCAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR GCA 90 bp | AGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTCCAAAGAAAGCAAGCTaGCCAGGGGGAACACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RLGGKRLYPQSQLSSLIAPKKAS*PGGTLA Trigger: GGCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGG...AGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR GCA 90 bp | CATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCCAAAGAAAGCAAGCTaGCCAGGGGGAACACTGGCC | + |
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Preference number: 2 (lower is better) Translates to: HPRNQTQVVRLGGKRLYPPKKAS*PGGTLA Trigger: GGCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGG...GGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATG 54% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR CCA 90 bp | TCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCACAAGAGTTCATTTCTaGGATGATGTGCAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: SWPWEESISLAPPVCAGSTRVHF*DDVQDS Trigger: GGAGTCCTGCACATCATCCCAGAAATGAACTCTTGT...GCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CAA 90 bp | CGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTCCAAGGTaGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATT | + |
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Preference number: 2 (lower is better) Translates to: RLYPQSQLSSLIAPR*RHQGLRSWPWEESI Trigger: AATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR GCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGCTGGCCCCTCCAGTCTaGGCAGGAAGCTGCTTCCTC | + |
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Preference number: 2 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVLAPPV*AGSCFL Trigger: GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAG...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CAA 90 bp | GGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTaGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: GVNSPNRFIPGIKLK*LGLVASAFTPRVNS Trigger: AGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR GCA 90 bp | TTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTAATTTCTGGGATGATGTaGAGGACTCCAAAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLGLVASAFTPRVNSPALISGMM*RTPKKA Trigger: TGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAAT...TAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCCTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTCTGGGATGATGTaGAGGACTCCAAAGAAAGCA | + |
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Preference number: 2 (lower is better) Translates to: LSLSKCWDYIITMASGCFISGMM*RTPKKA Trigger: TGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAAT...GAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAGGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
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| 3UTR-3UTR CCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGCAGGGACTAAGATCATaGCCCTGGGAAGAGTCTATT | + |
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Preference number: 2 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKQGLRS*PWEESI Trigger: AATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTG...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR CCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGACAAGAGTTCATTTCTaGGATGATGTGCAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLTRVHF*DDVQDS Trigger: GGAGTCCTGCACATCATCCCAGAAATGAACTCTTGT...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CCA 72 bp | CCAAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTaGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGC | + |
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Preference number: 3 (lower is better) Translates to: PRLRHQGLRSWP*EESISLAPPVC Trigger: GCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR GCA 72 bp | CTGCTTCCTCTACAAGAGTTCATTTCTGGGATGATGTaGAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGA | + |
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Preference number: 3 (lower is better) Translates to: LLPLQEFISGMM*RTPKKASCPGG Trigger: TCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGGAAGCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR TCA 72 bp | GGAAGCTGCTTCCTCTACAAGAGTTCATTTCTGGGATaGTGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAG | + |
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Preference number: 3 (lower is better) Translates to: GSCFLYKSSFLG*CAGLQRKQAAQ Trigger: CTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGGAAGCAGCTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CCA 72 bp | ACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTaGTCAGGGGACAAACGGAAGGAGTCAATTCTCCAA | + |
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Preference number: 3 (lower is better) Translates to: TFYCLCLCGHLW*SGDKRKESILQ Trigger: TTGGAGAATTGACTCCTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CCA 72 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATaGTGGTCAGGGGACAAACGGAAGGAGTCAATTCTC | + |
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Preference number: 3 (lower is better) Translates to: NTFYCLCLCGHL*WSGDKRKESIL Trigger: GAGAATTGACTCCTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR-3UTR CAA 90 bp | TGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTGTTATAAAAAGGGAATCAAACTCAAGTaGTTAGGCTTGGTGGCAAGC | + |
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Preference number: 3 (lower is better) Translates to: CWDYIITMASGCFICYKKGIKLK*LGLVAS Trigger: GCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCC...CTTTTTATAACAAATGAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCCGCAGCCATCGCACTTaGGGCCCTGGCGCACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: KLLGLVASAFTPRVNSPARSHRT*GPGARG Trigger: GCCTCGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...GGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCAGCCCTCCCGCAGGGTaGTGCTGGATTTCCGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: WEESISLAPPVCAGSCFLSPPAG*CWISGS Trigger: CGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCT...GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCCTGAGGCAGCAGAGGTaGCGGCGACTGGAGATCCAA | + |
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Preference number: 4 (lower is better) Translates to: SWPWEESISLAPPVCAGSLRQQR*RRLEIQ Trigger: TTGGATCTCCAGTCGCCGCCACCTCTGCTGCCTCAG...GCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCTCGCACTTGAGGCCCTaGCGCACGAGGCCGAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRSHLRP*RTRPKS Trigger: GCTCTTCGGCCTCGTGCGCCAGGGCCTCAAGTGCGA...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCCGAAGCAGTGTGGGTTaGTGCCCGGGGGTACGAGGC | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRRSSVG*CPGVRG Trigger: GCCTCGTACCCCCGGGCACCAACCCACACTGCTTCG...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCGATCTCGAAGCAGTGTaGGTTGGTGCCCGGGGGTAC | + |
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Preference number: 4 (lower is better) Translates to: SWPWEESISLAPPVCAGSDLEAV*VGARGY Trigger: GTACCCCCGGGCACCAACCCACACTGCTTCGAGATC...GCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATGTTCCCTGTCCACTTaGCCCTCCCGGGGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: LLGLVASAFTPRVNSPALCSLST*PSRGPA Trigger: GGCGGGGCCCCGGGAGGGCCAAGTGGACAGGGAACA...TAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCGCTCCAGATGAGATGTaGCTCCAGGGGCTGGCCGGG | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRAPDEM*LQGLAG Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCATCTGGAGC...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | AGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTAGCCCCTGCATCTCGTaGTCCTGCGGCAGACAGGCG | + |
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Preference number: 4 (lower is better) Translates to: RLGGKRLYPQSQLSSLIASPCIS*SCGRQA Trigger: CGCCTGTCTGCCGCAGGACCACGAGATGCAGGGGCT...AGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGCATCTCCCCGCAGTaGTCACAGAAGGCGGGAGCG | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRSISPQ*SQKAGA Trigger: CGCTCCCGCCTTCTGTGACCACTGCGGGGAGATGCT...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGTGTTCCCTGTCCACTTaGCCCTCCCGGGGCCCCGCC | + |
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Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWCSLST*PSRGPA Trigger: GGCGGGGCCCCGGGAGGGCCAAGTGGACAGGGAACA...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | AAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCAGCCCCTGCATCTCGTaGTCCTGCGGCAGACAGGCG | + |
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Preference number: 4 (lower is better) Translates to: KLLGLVASAFTPRVNSPASPCIS*SCGRQA Trigger: CGCCTGTCTGCCGCAGGACCACGAGATGCAGGGGCT...GGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCATGGAGAGCACTCTCTaGGTGGGAGCCGGGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRMESTL*VGAGDD Trigger: GTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCAT...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGCGCTCAGCCAGCCCCTaGATCTCGTGGTCCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWRSASP*ISWSCG Trigger: GCCGCAGGACCACGAGATGCAGGGGCTGGCTGAGCG...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGGGCCAGAGACGTGGATaGCAGGCGGCGCTTTCGAGC | + |
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Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWGQRRG*QAALSS Trigger: GCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCC...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTTGTCTGTGCGGTGTGTaGCCCGGGGCACTGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPCLCGV*PGALGA Trigger: TGCGCCCAGTGCCCCGGGGCACACACCGCACAGACA...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGTGTCTGTGCGGTGTGTaGCCCGGGGCACTGGGCGCA | + |
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Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRCLCGV*PGALGA Trigger: TGCGCCCAGTGCCCCGGGGCACACACCGCACAGACA...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | TCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTCCAACATGTCCCCGTaGAGTTTCTCCATCACCACG | + |
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Preference number: 4 (lower is better) Translates to: SWPWEESISLAPPVCAGSSNMSP*SFSITT Trigger: CGTGGTGATGGAGAAACTGCACGGGGACATGTTGGA...GCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTCGCTCAGCCAGCCCCTaGATCTCGTGGTCCTGCGGC | + |
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Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPRSASP*ISWSCG Trigger: GCCGCAGGACCACGAGATGCAGGGGCTGGCTGAGCG...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCCGGGTCAATCCGATCTaGATATGGAAGGAGACCCCC | + |
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Preference number: 4 (lower is better) Translates to: WEESISLAPPVCAGSCFLRVNPI*IWKETP Trigger: GGGGGTCTCCTTCCATATCCAGATCGGATTGACCCG...GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCGGAAATCCTCGAAGGTaGCCGAGGCCGACAGAACCA | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRGNPRR*PRPTEP Trigger: TGGTTCTGTCGGCCTCGGCCACCTTCGAGGATTTCC...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCTTGCACTGCAGGCCCTaGCGGAATAGACCCTTGAGC | + |
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Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGLHCRP*RNRPLS Trigger: GCTCAAGGGTCTATTCCGCCAGGGCCTGCAGTGCAA...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGAGCACTCTCTGAGTaGGAGCCGGGGATGACACCA | + |
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Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRRALSE*EPGMTP Trigger: TGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCT...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | CTCAGCCTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCAGCCCTCCCGCAGGGTaGTGCTGGATTTCCGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: LSLSKCWDYIITMASGCFSPPAG*CWISGS Trigger: CGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCT...GAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAGGCTGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
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| CDS-3UTR CCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCGCTGGCTCTCCTGCTTaGTGGGGAAGCGCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGAGSPA*WGSAVC Trigger: ACAAACTGCGCTTCCCCACCAAGCAGGAGAGCCAGC...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCACATGAGCCAACTCTaGGGCAGCCGGCAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGHMSQL*GSRQQH Trigger: GTGCTGTTGCCGGCTGCCTCAGAGTTGGCTCATGTG...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTCGCAGCCATCGCACTTaGGGCCCTGGCGCACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RKESILQTGSSQESNSSCRSHRT*GPGARG Trigger: GCCTCGTGCGCCAGGGCCTCAAGTGCGATGGCTGCG...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCATGGAGAGCACTCTCTaGGTGGGAGCCGGGGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGMESTL*VGAGDD Trigger: GTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCAT...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCAGGACTTCTCGCCGATaGTGCGAGCGAAGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGRTSRR*CERSQS Trigger: ACTTTGGCTTCGCTCGCATCATCGGCGAGAAGTCCT...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCAGGACTTCTCGCCGATaGTGCGAGCGAAGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: EASGTKIMALGRVYFPGPRTSRR*CERSQS Trigger: ACTTTGGCTTCGCTCGCATCATCGGCGAGAAGTCCT...GGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTAGGCGTGCCCACCACTaGGCGCCGGAAGGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPRRAHH*APEGLL Trigger: GAGAAGTCCTTCCGGCGCTCAGTGGTGGGCACGCCT...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCGGTTGTAACCCTGGTTaGGCAGTACCTCGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLLGLVASAFTPRVNSPAGCNPG*AVPRVP Trigger: TGGCACCCGAGGTACTGCTCAACCAGGGTTACAACC...GGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCGTAACCATGGGTGGCTaGGAGACTTGTCCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGVTMGG*ETCPRC Trigger: ACAGCGTGGACAAGTCTCTCAGCCACCCATGGTTAC...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | GAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCGCTGATCGCACCAGCTaGAGGAGGTTGGCTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: EASGTKIMALGRVYFPGPADRTS*RRLADV Trigger: AACATCAGCCAACCTCCTGCAGCTGGTGCGATCAGC...GGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | TTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTACTGAGCTGGCTCTCCTaGTTGGTGGGGAAGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: LLGLVASAFTPRVNSPALLSWLS*LVGKRS Trigger: ACTGCGCTTCCCCACCAAGCAGGAGAGCCAGCTCAG...TAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTCCACGCTGTAGCGCTTaGGCATCTTCACCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: RLGGKRLYPQSQLSSLIAPRCSA*ASSPAT Trigger: TGTTGCAGGTGAAGATGCGCAAGCGCTACAGCGTGG...AGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCTACAAGAGTTCATGCATGCGGTCGGATCTaGAAATCCTCGAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: FPWPLQSAQEAASSTRVHACGRI*KSSKVA Trigger: GGCCACCTTCGAGGATTTCCAGATCCGACCGCATGC...ATGAACTCTTGTAGAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCAAGGCGCACAGAATaGCCACTGGCCAGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGPRRTE*PLARDV Trigger: CACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGG...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCACGGGCATCAGTGCCTaGCGGATGGCTGTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGTGISA*RMAVSQ Trigger: TTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGT...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCGCCGGCCCTTCTCACTaGAGAGGATCATCTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGAGPSH*RGSSPT Trigger: TGTTGGAGATGATCCTCTCCAGTGAGAAGGGCCGGC...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCAGGTGTGTGGCACCTTaGCCTTGGACATCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGRCVAP*PWTSAS Trigger: AGATGCTGATGTCCAAGGTCAAGGTGCCACACACCT...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCGGCGGAATAGACCCTTaGGCAGTTTCTTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRGGIDP*AVSCKP Trigger: AGGCTTGCAAGAAACTGCTCAAGGGTCTATTCCGCC...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCGTCGATGGCTCCAGATaGGATGTGGCTCCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: IPGIKLKLLGLVASAFTPVDGSR*DVAPGA Trigger: AGCCCCTGGAGCCACATCTCATCTGGAGCCATCGAC...GGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCACTGGCCAGAGACGTaGATGACAGGCGGCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: HPRNQTQVVRLGGKRLYPHWPET*MTGGAF Trigger: GAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTG...GGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCAAGCCTGGCAAACGGTaGGCCGTGTGTAGCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGKPGKR*AVCSYV Trigger: TACATAGCTACACACGGCCCACCGTTTGCCAGGCTT...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | GAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCTGTAACCATGGGTaGCTGAGAGACTTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: EASGTKIMALGRVYFPGPSCNHG*LRDLST Trigger: CGTGGACAAGTCTCTCAGCCACCCATGGTTACAGGA...GGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| 3UTR CAA 72 bp | CCCCAGAGTCAACTCTCCAGCCTTATCGCTCCAAGGTaGAGGCATCAGGGACTAAGATCATGGCCCTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: PQSQLSSLIAPR*RHQGLRSWPWE Trigger: TTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTGACTCTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTCACATGAGCCAACTCTaGGGCAGCCGGCAACAGCAC | + |
|
Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPHMSQL*GSRQQH Trigger: GTGCTGTTGCCGGCTGCCTCAGAGTTGGCTCATGTG...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | TGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCAGCGCAGTTTGTCAATaGCCTTTACTGCAACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: WEESISLAPPVCAGSCFLSAVCQ*PLLQRL Trigger: GAGACGTTGCAGTAAAGGTCATTGACAAACTGCGCT...GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR TCA 90 bp | AAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCAGTGGACGATGTTCTTaGAGTGCAGGTGTCTCAGCG | + |
|
Preference number: 4 (lower is better) Translates to: KLLGLVASAFTPRVNSPASGRCS*SAGVSA Trigger: CGCTGAGACACCTGCACTTCAAGAACATCGTCCACT...GGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGGATAACGGGCATCAGTaGCTGGCGGATGGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWDNGHQ*LADGCL Trigger: GAGACAGCCATCCGCCAGGCACTGATGCCCGTTATC...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR GCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGCTGAGCTGGCTCTCCTaGTTGGTGGGGAAGCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRLSWLS*LVGKRS Trigger: ACTGCGCTTCCCCACCAAGCAGGAGAGCCAGCTCAG...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGTCAGTGCCTGGCGGATaGCTGTCTCCCAACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRSVPGG*LSPNPE Trigger: TTCGGGGTTGGGAGACAGCCATCCGCCAGGCACTGA...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCGCTCCAGATGAGATGTaGCTCCAGGGGCTGGCCGGG | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASAPDEM*LQGLAG Trigger: CCCGGCCAGCCCCTGGAGCCACATCTCATCTGGAGC...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGGCTAGTTGCTTCACATaGGCCAACTCTGAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWASCFT*ANSEAA Trigger: GGCTGCCTCAGAGTTGGCTCATGTGAAGCAACTAGC...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGGCCAGAGACGTGGATaGCAGGCGGCGCTTTCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVGQRRG*QAALSS Trigger: GCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCC...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCATCCTCCAACTCATCTaGGATGGAGCTCTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGILQLI*DGALIS Trigger: GCTGATAAGAGCTCCATCTCAGATGAGTTGGAGGAT...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGTTGTAACCCTGGTTaGGCAGTACCTCGGGTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRGCNPG*AVPRVP Trigger: TGGCACCCGAGGTACTGCTCAACCAGGGTTACAACC...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGGTAACCATGGGTGGCTaGGAGACTTGTCCACGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWVTMGG*ETCPRC Trigger: ACAGCGTGGACAAGTCTCTCAGCCACCCATGGTTAC...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTTTGCGCATCTTCACCTaGAACAGGTTGTTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RLGGKRLYPQSQLSSLIALRIFT*NRLLMR Trigger: CCTCATCAACAACCTGTTGCAGGTGAAGATGCGCAA...AGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCCGGGTCAATCCGATCTaGATATGGAAGGAGACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: IPGIKLKLLGLVASAFTPRVNPI*IWKETP Trigger: GGGGGTCTCCTTCCATATCCAGATCGGATTGACCCG...GGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGAT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGAAATCCTCGAAGGTaGCCGAGGCCGACAGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPGNPRR*PRPTEP Trigger: TGGTTCTGTCGGCCTCGGCCACCTTCGAGGATTTCC...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGAGCATCTCCCCGCAGTaGTCACAGAAGGCGGGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLSISPQ*SQKAGA Trigger: CGCTCCCGCCTTCTGTGACCACTGCGGGGAGATGCT...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCGAAGCAGTGTGGGTTaGTGCCCGGGGGTACGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRRSSVG*CPGVRG Trigger: GCCTCGTACCCCCGGGCACCAACCCACACTGCTTCG...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCCTTGGATCTGACTGTTaGACACGGAGATACTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: WDDVQDSKESKLPRGNTGLGSDC*TRRYSE Trigger: CTCTGAGTATCTCCGTGTCCAACAGTCAGATCCAAG...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCTGCAGGAGGTTGGCTaGTGTTGGGTCATGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGLQEVG*CWVMFE Trigger: TTCAAACATGACCCAACATCAGCCAACCTCCTGCAG...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCACATTCTCTTGGATCTaGCTGTTGGACACGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: TKIMALGRVYFPGPSSLRTFSWI*LLDTEI Trigger: TATCTCCGTGTCCAACAGTCAGATCCAAGAGAATGT...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAAGGCGTGCCCACCACTaGGCGCCGGAAGGACTTCTC | + |
|
Preference number: 4 (lower is better) Translates to: EGVNSPNRFIPGIKLKLLRRAHH*APEGLL Trigger: GAGAAGTCCTTCCGGCGCTCAGTGGTGGGCACGCCT...TAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | CTCAGCCTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCTCCAACATGTCCCCGTaGAGTTTCTCCATCACCACG | + |
|
Preference number: 4 (lower is better) Translates to: LSLSKCWDYIITMASGCFSNMSP*SFSITT Trigger: CGTGGTGATGGAGAAACTGCACGGGGACATGTTGGA...GAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAGGCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGCTGAGGCAGCAGAGGTaGCGGCGACTGGAGATCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKLRQQR*RRLEIQ Trigger: TTGGATCTCCAGTCGCCGCCACCTCTGCTGCCTCAG...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGAATCCGATCTGGATATaGAAGGAGACCCCCGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWNPIWI*KETPEP Trigger: GGGTTCGGGGGTCTCCTTCCATATCCAGATCGGATT...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCCAGCTGCAGGAGGTTaGCTGATGTTGGGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: HPRNQTQVVRLGGKRLYPPAAGG*LMLGHV Trigger: AACATGACCCAACATCAGCCAACCTCCTGCAGCTGG...GGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATG 52% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACTCGCACTTGAGGCCCTaGCGCACGAGGCCGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: IHFIACVYVGTYGGQGTNSHLRP*RTRPKS Trigger: GCTCTTCGGCCTCGTGCGCCAGGGCCTCAAGTGCGA...GTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGCACAGAATGGCCACTaGCCAGAGACGTGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: KVEASGTKIMALGRVYFPAQNGH*PETWMT Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGC...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTCAGTGCCTGGCGGATaGCTGTCTCCCAACCCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASSVPGG*LSPNPE Trigger: TTCGGGGTTGGGAGACAGCCATCCGCCAGGCACTGA...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGCGGAATAGACCCTTaGGCAGTTTCTTGCAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRGGIDP*AVSCKP Trigger: AGGCTTGCAAGAAACTGCTCAAGGGTCTATTCCGCC...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTGGCCACTTCATTCCTaGGCTGGCTCTCCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLWPLHS*AGSPAW Trigger: CCAAGCAGGAGAGCCAGCTCAGGAATGAAGTGGCCA...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGGTCGATGGCTCCAGATaGGATGTGGCTCCAGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRVDGSR*DVAPGA Trigger: AGCCCCTGGAGCCACATCTCATCTGGAGCCATCGAC...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGACGATGTTCTTGAAGTaGAGGTGTCTCAGCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRTMFLK*RCLSAT Trigger: GGTGGCGCTGAGACACCTGCACTTCAAGAACATCGT...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | GTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCTTGCGCATCTTCACCTaGAACAGGTTGTTGATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEASGTKIMALGRVYFPGLRIFT*NRLLMR Trigger: CCTCATCAACAACCTGTTGCAGGTGAAGATGCGCAA...GCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGCACTGGCCAGAGACGTaGATGACAGGCGGCGCTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVHWPET*MTGGAF Trigger: GAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTG...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGGATCTCGAAGCAGTGTaGGTTGGTGCCCGGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRDLEAV*VGARGY Trigger: GTACCCCCGGGCACCAACCCACACTGCTTCGAGATC...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGACGGGCATCAGTGCCTaGCGGATGGCTGTCTCCCAA | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVTGISA*RMAVSQ Trigger: TTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGT...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACGGCTCTCCTGCTTGGTaGGGAAGCGCAGTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: VHPRNQTQVVRLGGKRLYGSPAW*GSAVCQ Trigger: TTGACAAACTGCGCTTCCCCACCAAGCAGGAGAGCC...GTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGGCTGGCTCTCCTGCTTaGTGGGGAAGCGCAGTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKAGSPA*WGSAVC Trigger: ACAAACTGCGCTTCCCCACCAAGCAGGAGAGCCAGC...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | GTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACGCCGGCCCTTCTCACTaGAGAGGATCATCTCCAACA | + |
|
Preference number: 4 (lower is better) Translates to: VHPRNQTQVVRLGGKRLYAGPSH*RGSSPT Trigger: TGTTGGAGATGATCCTCTCCAGTGAGAAGGGCCGGC...GTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| 3UTR CAA 72 bp | TCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTaGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SPNRFIPGIKLK*LGLVASAFTPR Trigger: TCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGGCTAGTTGCTTCACATaGGCCAACTCTGAGGCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKASCFT*ANSEAA Trigger: GGCTGCCTCAGAGTTGGCTCATGTGAAGCAACTAGC...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGTGGCCACTTCATTCCTaGGCTGGCTCTCCTGCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRWPLHS*AGSPAW Trigger: CCAAGCAGGAGAGCCAGCTCAGGAATGAAGTGGCCA...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGTCAGTGTGTCCTTGTTaGTGTAATGGACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRSVCPC*CNGPPS Trigger: GCTGGGTGGTCCATTACAGCAACAAGGACACACTGA...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTGCACAGAATGGCCACTaGCCAGAGACGTGGATGACA | + |
|
Preference number: 4 (lower is better) Translates to: RKESILQTGSSQESNSSCAQNGH*PETWMT Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGC...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACCCAAGGCGCACAGAATaGCCACTGGCCAGAGACGTG | + |
|
Preference number: 4 (lower is better) Translates to: IHFIACVYVGTYGGQGTNPRRTE*PLARDV Trigger: CACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGG...GTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKSFLQA*QTVGRV Trigger: CACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGAGTTTCTTGCAAGCCTaGCAAACGGTGGGCCGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLSFLQA*QTVGRV Trigger: CACACGGCCCACCGTTTGCCAGGCTTGCAAGAAACT...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGTTGCACTGCAGGCCCTaGCGGAATAGACCCTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVLHCRP*RNRPLS Trigger: GCTCAAGGGTCTATTCCGCCAGGGCCTGCAGTGCAA...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGAGAGCACTCTCTGAGTaGGAGCCGGGGATGACACCA | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVRALSE*EPGMTP Trigger: TGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCT...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCGCCGCGTTCTGTATCTaGTCATTGATGTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FIPGIKLKLLGLVASAFTAAFCI*SLMSSS Trigger: GGACGAGGACATCAATGACCAGATACAGAACGCGGC...GGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACAGTGGGAGCCGGGGATaGCACCAGAATCCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: IHFIACVYVGTYGGQGTNSGSRG*HQNPPT Trigger: AGTTGGAGGATTCTGGTGTCATCCCCGGCTCCCACT...GTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGGCTGATCGCACCAGCTaGAGGAGGTTGGCTGATGTT | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRADRTS*RRLADV Trigger: AACATCAGCCAACCTCCTGCAGCTGGTGCGATCAGC...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | GTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACTCAGTGTGTCCTTGTTaGTGTAATGGACCACCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VHPRNQTQVVRLGGKRLYSVCPC*CNGPPS Trigger: GCTGGGTGGTCCATTACAGCAACAAGGACACACTGA...GTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGCCACGCTGTAGCGCTTaGGCATCTTCACCTGCAACA | + |
|
Preference number: 4 (lower is better) Translates to: NSPNRFIPGIKLKLLGLVPRCSA*ASSPAT Trigger: TGTTGCAGGTGAAGATGCGCAAGCGCTACAGCGTGG...CACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGCCAGCTGCAGGAGGTTaGCTGATGTTGGGTCATGTT | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLPAAGG*LMLGHV Trigger: AACATGACCCAACATCAGCCAACCTCCTGCAGCTGG...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCTATAAGGAAGGTGTGTaGCACCTTGACCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HPRNQTQVVRLGGKRLYPYKEGV*HLDLGH Trigger: ATGTCCAAGGTCAAGGTGCCACACACCTTCCTTATA...GGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGCCAACTCATCTGAGATaGAGCTCTTATCAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: RVHFWDDVQDSKESKLPRPTHLR*SSYQPH Trigger: GTGAGGCTGATAAGAGCTCCATCTCAGATGAGTTGG...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGTCTTCCTCACTGGCATaGAGAGCACTCTCTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKSSSLA*RALSEW Trigger: CCACTCAGAGAGTGCTCTCCATGCCAGTGAGGAAGA...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCGGGTGCCGTAGACTCTaGAGAATGGCCACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASGCRRL*RMATSF Trigger: GAATGAAGTGGCCATTCTCCAGAGTCTACGGCACCC...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTGCCGCGTTCTGTATCTaGTCATTGATGTCCTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RKESILQTGSSQESNSSCAAFCI*SLMSSS Trigger: GGACGAGGACATCAATGACCAGATACAGAACGCGGC...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTCCTGTAACCATGGGTaGCTGAGAGACTTGTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: RKESILQTGSSQESNSSCSCNHG*LRDLST Trigger: CGTGGACAAGTCTCTCAGCCACCCATGGTTACAGGA...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | CTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTGTCTGCAGGAGGTTGGCTaGTGTTGGGTCATGTTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: LSKCWDYIITMASGCFICLQEVG*CWVMFE Trigger: TTCAAACATGACCCAACATCAGCCAACCTCCTGCAG...ACAAATGAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS-3UTR TCA 90 bp | TTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCATCCTCCAACTCATCTaGGATGGAGCTCTTATCAGC | + |
|
Preference number: 4 (lower is better) Translates to: FIPGIKLKLLGLVASAFTILQLI*DGALIS Trigger: GCTGATAAGAGCTCCATCTCAGATGAGTTGGAGGAT...GGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAAAGTGGGAGCCGGGGATaGCACCAGAATCCTCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: NTFYCLCLCGHLWWSGDKSGSRG*HQNPPT Trigger: AGTTGGAGGATTCTGGTGTCATCCCCGGCTCCCACT...TTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | GTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACAGCGCAGTTTGTCAATaGCCTTTACTGCAACGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VHPRNQTQVVRLGGKRLYSAVCQ*PLLQRL Trigger: GAGACGTTGCAGTAAAGGTCATTGACAAACTGCGCT...GTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR GCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGACGATGTTCTTGAAGTaGAGGTGTCTCAGCGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRTMFLK*RCLSAT Trigger: GGTGGCGCTGAGACACCTGCACTTCAAGAACATCGT...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAAGCATGCGGTCGGATCTaGAAATCCTCGAAGGTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: NTFYCLCLCGHLWWSGDKACGRI*KSSKVA Trigger: GGCCACCTTCGAGGATTTCCAGATCCGACCGCATGC...TTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CTCAGCCTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCCCTTGTAGTATCTGTTaGTCGTGTTGTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLSKCWDYIITMASGCFPCSIC*SCCSGR Trigger: TCTTCCAGAACAACACGACCAACAGATACTACAAGG...GAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAGGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS-3UTR CCA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGCCTTGTAGTATCTGTTaGTCGTGTTGTTCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWPCSIC*SCCSGR Trigger: TCTTCCAGAACAACACGACCAACAGATACTACAAGG...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACAGGTGTGTGGCACCTTaGCCTTGGACATCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: IHFIACVYVGTYGGQGTNRCVAP*PWTSAS Trigger: AGATGCTGATGTCCAAGGTCAAGGTGCCACACACCT...GTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAAAGCCTGGCAAACGGTaGGCCGTGTGTAGCTATGTA | + |
|
Preference number: 4 (lower is better) Translates to: EGVNSPNRFIPGIKLKLLKPGKR*AVCSYV Trigger: TACATAGCTACACACGGCCCACCGTTTGCCAGGCTT...TAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCCTTGGATCTGACTGTTaGACACGGAGATACTCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASLGSDC*TRRYSE Trigger: CTCTGAGTATCTCCGTGTCCAACAGTCAGATCCAAG...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAAGGCTCTCCTGCTTGGTaGGGAAGCGCAGTTTGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: NTFYCLCLCGHLWWSGDKGSPAW*GSAVCQ Trigger: TTGACAAACTGCGCTTCCCCACCAAGCAGGAGAGCC...TTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGATGTTGGGTCATGTTTaGAGAGCAGGATCTTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLMLGHV*RAGSCR Trigger: ACGACAAGATCCTGCTCTTCAAACATGACCCAACAT...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR TCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCACATTCTCTTGGATCTaGCTGTTGGACACGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASTFSWI*LLDTEI Trigger: TATCTCCGTGTCCAACAGTCAGATCCAAGAGAATGT...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAATCTTCCTCACTGGCATaGAGAGCACTCTCTGAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTFYCLCLCGHLWWSGDKSSSLA*RALSEW Trigger: CCACTCAGAGAGTGCTCTCCATGCCAGTGAGGAAGA...TTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTGTGGTTTCAAGTCACAGTaGACGATGTTCTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: LSKCWDYIITMASGCFICGFKSQ*TMFLKC Trigger: GCACTTCAAGAACATCGTCCACTGTGACTTGAAACC...ACAAATGAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS-3UTR CCA 90 bp | TGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTGTTATAAAAAGGGGTGCCGTAGACTCTaGAGAATGGCCACTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: CWDYIITMASGCFICYKKGCRRL*RMATSF Trigger: GAATGAAGTGGCCATTCTCCAGAGTCTACGGCACCC...CTTTTTATAACAAATGAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS-3UTR CCA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGGGTTTCAAGTCACAGTaGACGATGTTCTTGAAGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRGFKSQ*TMFLKC Trigger: GCACTTCAAGAACATCGTCCACTGTGACTTGAAACC...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | GAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTATATAAGGAAGGTGTGTaGCACCTTGACCTTGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: EGVNSPNRFIPGIKLKLLYKEGV*HLDLGH Trigger: ATGTCCAAGGTCAAGGTGCCACACACCTTCCTTATA...TAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | AATACATTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACCAACTCATCTGAGATaGAGCTCTTATCAGCCTCAC | + |
|
Preference number: 4 (lower is better) Translates to: NTFYCLCLCGHLWWSGDKPTHLR*SSYQPH Trigger: GTGAGGCTGATAAGAGCTCCATCTCAGATGAGTTGG...TTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAATGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | ACGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTGGTCGTGTTGTTCTaGAAGAGGGTAATGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: TEGVNSPNRFIPGIKLKLLVVLF*KRVMHL Trigger: TAAATGCATTACCCTCTTCCAGAACAACACGACCAA...CAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CCA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTTGGTCGTGTTGTTCTaGAAGAGGGTAATGCATTTA | + |
|
Preference number: 4 (lower is better) Translates to: PLQEFISGMMCRTPKKASLVVLF*KRVMHL Trigger: TAAATGCATTACCCTCTTCCAGAACAACACGACCAA...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | CAGAGGATGCTGATGCGCTCAGCCAGCCCCTGCATCTCGTGGTCCTaGGGCAGACAGGCGCCACCCAGGTCCCCTTCTGCAGGAGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: QRMLMRSASPCISWS*GRQAPPRSPSAGVP Trigger: TGGGACTCCTGCAGAAGGGGACCTGGGTGGCGCCTGTCTGCCGCAGGACCACGAGATGCAGGGGCTGGCTGAGCGCATCAGCATCCTCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | CATCTCGTGGTCCTGCGGCAGACAGGCGCCACCCAGGTCCCCTTCTaGAGGAGTCCCATGGCGCTCTGCCACAAACTGATCCCAGCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: HLVVLRQTGATQVPF*RSPMALCHKLIPAC Trigger: GCACGCTGGGATCAGTTTGTGGCAGAGCGCCATGGGACTCCTGCAGAAGGGGACCTGGGTGGCGCCTGTCTGCCGCAGGACCACGAGATG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | CACTTGAGGCCCTGGCGCACGAGGCCGAAGAGCATCTCCCCGCAGTaGTCACAGAAGGCGGGAGCGCGGTACGAGTGCACAGTGAGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: HLRPWRTRPKSISPQ*SQKAGARYECTVRA Trigger: TGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCACTGCGGGGAGATGCTCTTCGGCCTCGTGCGCCAGGGCCTCAAGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | CCCGGGGCACTGGGCGCATCTTGGAGGATAACGGGCATCAGTGCCTaGCGGATGGCTGTCTCCCAACCCCGAACGGCCTCTGTTCCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: PGALGASWRITGISA*RMAVSQPRTASVPC Trigger: ACAGGGAACAGAGGCCGTTCGGGGTTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCCCCGGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS TCA 90 bp | CCCCGCAGTGGTCACAGAAGGCGGGAGCGCGGTACGAGTGCACAGTaGGAGCATGCGGTCGGATCTGGAAATCCTCGAAGGTGGCCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PRSGHRRRERGTSAQ*EHAVGSGNPRRWPR Trigger: CCTCGGCCACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCACTGCGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | GCGGGAGCGCGGTACGAGTGCACAGTGAGAGCATGCGGTCGGATCTaGAAATCCTCGAAGGTGGCCGAGGCCGACAGAACCACCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: AGARYECTVRACGRI*KSSKVAEADRTTST Trigger: GGTGGAGGTGGTTCTGTCGGCCTCGGCCACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | TCGGCGGTGCAGGGTAAGGACTCGGAGCTGCCAAGGCGCACAGAATaGCCACTGGCCAGAGACGTGGATGACAGGCGGCGCTTTCGAGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAVQGKDSELPRRTE*PLARDVDDRRRFRA Trigger: TGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCTTACCCTGCACCGCCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | GACGCTTGTCTGTGCGGTGTGTGCCCCGGGGCACTGGGCGCATCTTaGAGGATAACGGGCATCAGTGCCTGGCGGATGGCTGTCTCCCAA | + |
|
Preference number: 5 (lower is better) Translates to: DACLCGVCPGALGAS*RITGISAWRMAVSQ Trigger: TTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | TGCAGGGTAAGGACTCGGAGCTGCCAAGGCGCACAGAATGGCCACTaGCCAGAGACGTGGATGACAGGCGGCGCTTTCGAGCACCACTGC | + |
|
Preference number: 5 (lower is better) Translates to: CRVRTRSCQGAQNGH*PETWMTGGAFEHHC Trigger: GCAGTGGTGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCTTACCCTGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CAA 90 bp | TCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTCGAAGCAGTGTGGGTaGGTGCCCGGGGGTACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWPWEESISLAPPVCAGSSKQCG*VPGGTR Trigger: CCTCGTACCCCCGGGCACCAACCCACACTGCTTCGA...GCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CAA 90 bp | AAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCCTGTTCCCTGTCCACTaGGCCCTCCCGGGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: KLLGLVASAFTPRVNSPALFPVH*ALPGPR Trigger: GCGGGGCCCCGGGAGGGCCAAGTGGACAGGGAACAG...GGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CAA 90 bp | TTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCTACAAGAGTTCATCTGTTCCCTGTCCACTaGGCCCTCCCGGGGCCCCGC | + |
|
Preference number: 5 (lower is better) Translates to: FPWPLQSAQEAASSTRVHLFPVH*ALPGPR Trigger: GCGGGGCCCCGGGAGGGCCAAGTGGACAGGGAACAG...ATGAACTCTTGTAGAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS TCA 90 bp | GGAGCTGCCAAGGCGCACAGAATGGCCACTGGCCAGAGACGTGGATaGCAGGCGGCGCTTTCGAGCACCACTGCAGTTGTTCGGGATGCT | + |
|
Preference number: 5 (lower is better) Translates to: GAAKAHRMATGQRRG*QAALSSTTAVVRDA Trigger: AGCATCCCGAACAACTGCAGTGGTGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | TGGTCACAGAAGGCGGGAGCGCGGTACGAGTGCACAGTGAGAGCATaGGGTCGGATCTGGAAATCCTCGAAGGTGGCCGAGGCCGACAGA | + |
|
Preference number: 5 (lower is better) Translates to: WSQKAGARYECTVRA*GRIWKSSKVAEADR Trigger: TCTGTCGGCCTCGGCCACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | TGCTACGGCTCAGCTCTTCGGCGGTGCAGGGTAAGGACTCGGAGCTaGCAAGGCGCACAGAATGGCCACTGGCCAGAGACGTGGATGACA | + |
|
Preference number: 5 (lower is better) Translates to: CYGSALRRCRVRTRS*QGAQNGHWPETWMT Trigger: TGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCTTACCCTGCACCGCCGAAGAGCTGAGCCGTAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | ACTCGGAGCTGCCAAGGCGCACAGAATGGCCACTGGCCAGAGACGTaGATGACAGGCGGCGCTTTCGAGCACCACTGCAGTTGTTCGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TRSCQGAQNGHWPET*MTGGAFEHHCSCSG Trigger: TCCCGAACAACTGCAGTGGTGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | AGCATCTCCCCGCAGTGGTCACAGAAGGCGGGAGCGCGGTACGAGTaGACAGTGAGAGCATGCGGTCGGATCTGGAAATCCTCGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SISPQWSQKAGARYE*TVRACGRIWKSSKV Trigger: CACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCACTGCGGGGAGATGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 90 bp | TGTCCTTGTTGCTGTAATGGACCACCCAGCCCTCCCGCAGGGTGGTaGTGGATTTCCGGGTCGTGTGTCGCACAGACTGTACCACGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: CPCCCNGPPSPPAGW*WISGSCVAQTVPRA Trigger: TGCGCGTGGTACAGTCTGTGCGACACACGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCAACAAGGACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | CCTTGTTGCTGTAATGGACCACCCAGCCCTCCCGCAGGGTGGTGCTaGATTTCCGGGTCGTGTGTCGCACAGACTGTACCACGCGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PCCCNGPPSPPAGWC*ISGSCVAQTVPRAS Trigger: TGATGCGCGTGGTACAGTCTGTGCGACACACGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCAACAAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | GTGTGTCCTTGTTGCTGTAATGGACCACCCAGCCCTCCCGCAGGGTaGTGCTGGATTTCCGGGTCGTGTGTCGCACAGACTGTACCACGC | + |
|
Preference number: 5 (lower is better) Translates to: VCPCCCNGPPSPPAG*CWISGSCVAQTVPR Trigger: GCGTGGTACAGTCTGTGCGACACACGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCAACAAGGACACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CAA 90 bp | TGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGGGGAACACTGGCTCGAAGCAGTGTGGGTaGGTGCCCGGGGGTACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: WDDVQDSKESKLPRGNTGSKQCG*VPGGTR Trigger: CCTCGTACCCCCGGGCACCAACCCACACTGCTTCGA...GCCAGTGTTCCCCCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS-3UTR CAA 90 bp | CTCAGCCTCTCCAAGTGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCCCGCAGCCATCGCACTaGAGGCCCTGGCGCACGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LSLSKCWDYIITMASGCFPQPSH*RPWRTR Trigger: CCTCGTGCGCCAGGGCCTCAAGTGCGATGGCTGCGG...GAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCACTTGGAGAGGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
||
| CDS TCA 90 bp | TCGAAGCAGTGTGGGTTGGTGCCCGGGGGTACGAGGCTGAAGTTCTaGGCCGGTTCCACCGCAAGGATTTCAGACAGCGGGATTTCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SKQCGLVPGGTRLKF*AGSTARISDSGISL Trigger: CAAGGAAATCCCGCTGTCTGAAATCCTTGCGGTGGAACCGGCTCAGAACTTCAGCCTCGTACCCCCGGGCACCAACCCACACTGCTTCGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 90 bp | GCCCACAAAGTAGGTGACATTGGCCGTGATGATCTCGAAGCAGTGTaGGTTGGTGCCCGGGGGTACGAGGCTGAAGTTCTGAGCCGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AHKVGDIGRDDLEAV*VGARGYEAEVLSRF Trigger: GAACCGGCTCAGAACTTCAGCCTCGTACCCCCGGGCACCAACCCACACTGCTTCGAGATCATCACGGCCAATGTCACCTACTTTGTGGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 90 bp | GCTCTGCCACAAACTGATCCCAGCGTGCGTCGTCGCTCTCGTGCGTaGTATATCGCTCGCCCATCTTTCCCTCTAGCTCTCGGAGGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ALPQTDPSVRRRSRA*YIARPSFPLALGGQ Trigger: TTGACCTCCGAGAGCTAGAGGGAAAGATGGGCGAGCGATATATCACGCACGAGAGCGACGACGCACGCTGGGATCAGTTTGTGGCAGAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 90 bp | CCCTCGCCTTCCTCTTCCTCACTGGCATGGAGAGCACTCTCTGAGTaGGAGCCGGGGATGACACCAGAATCCTCCAACTCATCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: PSPSSSSLAWRALSE*EPGMTPESSNSSEM Trigger: CATCTCAGATGAGTTGGAGGATTCTGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCATGCCAGTGAGGAAGAGGAAGGCGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCCCCTTGAGCAGTTTCTaGCAAGCCTGGCAAACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WEESISLAPPVCAGSCFLPLSSF*QAWQTV Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTGCTCAAGGG...GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 90 bp | TACAGTCTAGACGCCAGTAGTGCCGTTTCCTCAGTGTGTCCTTGTTaGTGTAATGGACCACCCAGCCCTCCCGCAGGGTGGTGCTGGATT | + |
|
Preference number: 5 (lower is better) Translates to: YSLDASSAVSSVCPC*CNGPPSPPAGWCWI Trigger: AATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCAACAAGGACACACTGAGGAAACGGCACTACTGGCGTCTAGACTGTA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCACCAGCTGCAGGAGGTaGGCTGATGTTGGGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: TKIMALGRVYFPGPSSLRTSCRR*ADVGSC Trigger: ACATGACCCAACATCAGCCAACCTCCTGCAGCTGGT...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | ACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCCCCTTGAGCAGTTTCTaGCAAGCCTGGCAAACGGTG | + |
|
Preference number: 5 (lower is better) Translates to: TKIMALGRVYFPGPSSLRPLSSF*QAWQTV Trigger: CACCGTTTGCCAGGCTTGCAAGAAACTGCTCAAGGG...GCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 90 bp | TCTGGGAACTTCTGGTCCACGATAGAACAGGCTAGTTGCTTCACATaGGCCAACTCTGAGGCAGCCGGCAACAGCACGAACTCTCGGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SGNFWSTIEQASCFT*ANSEAAGNSTNSRV Trigger: GACCCGAGAGTTCGTGCTGTTGCCGGCTGCCTCAGAGTTGGCTCATGTGAAGCAACTAGCCTGTTCTATCGTGGACCAGAAGTTCCCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 90 bp | CTTCCTCACTGGCATGGAGAGCACTCTCTGAGTGGGAGCCGGGGATaGCACCAGAATCCTCCAACTCATCTGAGATGGAGCTCTTATCAG | + |
|
Preference number: 5 (lower is better) Translates to: LPHWHGEHSLSGSRG*HQNPPTHLRWSSYQ Trigger: CTGATAAGAGCTCCATCTCAGATGAGTTGGAGGATTCTGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCATGCCAGTGAGGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | AGGCTTGGTGGCAAGCGCCTTTACCCCCAGAGTCAACTCTCCAGCCTTATCGCTTTGGACATCAGCATCTaGTCCAACTCAATGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: RLGGKRLYPQSQLSSLIALDISI*SNSMGR Trigger: CCGACCCATTGAGTTGGACAAGATGCTGATGTCCAA...AGCGATAAGGCTGGAGAGTTGACTCTGGGGGTAAAGGCGCTTGCCACCAAGCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCAGCGAGCTCTGGGCCTaGTGTCCCTCGCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FIPGIKLKLLGLVASAFTSELWA*CPSPSS Trigger: AGAGGAAGGCGAGGGACACAAGGCCCAGAGCTCGCT...GGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCTACAAGAGTTCATTTGGACATCAGCATCTaGTCCAACTCAATGGGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: FPWPLQSAQEAASSTRVHLDISI*SNSMGR Trigger: CCGACCCATTGAGTTGGACAAGATGCTGATGTCCAA...ATGAACTCTTGTAGAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTAGCGAGCTCTGGGCCTaGTGTCCCTCGCCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RKESILQTGSSQESNSSCSELWA*CPSPSS Trigger: AGAGGAAGGCGAGGGACACAAGGCCCAGAGCTCGCT...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TGGGAAGAGTCTATTTCCCTGGCCCCTCCAGTCTGCGCAGGAAGCTGCTTCCTCTATCTGTTGGTCGTGTaGTTCTGGAAGAGGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: WEESISLAPPVCAGSCFLYLLVV*FWKRVM Trigger: CATTACCCTCTTCCAGAACAACACGACCAACAGATA...GAGGAAGCAGCTTCCTGCGCAGACTGGAGGGGCCAGGGAAATAGACTCTTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 90 bp | CTGGCAAACGGTGGGCCGTGTGTAGCTATGTATAAGGAAGGTGTGTaGCACCTTGACCTTGGACATCAGCATCTTGTCCAACTCAATGGG | + |
|
Preference number: 5 (lower is better) Translates to: LANGGPCVAMYKEGV*HLDLGHQHLVQLNG Trigger: CCCATTGAGTTGGACAAGATGCTGATGTCCAAGGTCAAGGTGCCACACACCTTCCTTATACATAGCTACACACGGCCCACCGTTTGCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 90 bp | TCTGGTAGACAGTGGCGATATCCACATTCTCTTGGATCTGACTGTTaGACACGGAGATACTCAGAGACGCTTGTCTGTGCGGTGTGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SGRQWRYPHSLGSDC*TRRYSETLVCAVCA Trigger: GGCACACACCGCACAGACAAGCGTCTCTGAGTATCTCCGTGTCCAACAGTCAGATCCAAGAGAATGTGGATATCGCCACTGTCTACCAGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | ATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACCCCCGTGGGGAAGCGCAGTTaGTCAATGACCTTTACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IPGIKLKLLGLVASAFTPVGKRS*SMTFTA Trigger: TGCAGTAAAGGTCATTGACAAACTGCGCTTCCCCAC...GGGGGTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | AGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTGCCCAGGACCTGCAACAGGTTGTaGATGAGGTCGATGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: RVHFWDDVQDSKESKLPRTCNRL*MRSMAP Trigger: TGGAGCCATCGACCTCATCAACAACCTGTTGCAGGT...CCTGGGCAGCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | AAGGTTGAGGCATCAGGGACTAAGATCATGGCCCTGGGAAGAGTCTATTTCCCTACCTGCAACAGGTTGTaGATGAGGTCGATGGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: KVEASGTKIMALGRVYFPTCNRL*MRSMAP Trigger: TGGAGCCATCGACCTCATCAACAACCTGTTGCAGGT...AGGGAAATAGACTCTTCCCAGGGCCATGATCTTAGTCCCTGATGCCTCAACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | CAACTCTCCAGCCTTATCGCTCCAAGGTTGAGGCATCAGGGACTAAGATCATGGGATGTTGGGTCATGTTaGAAGAGCAGGATCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: QLSSLIAPRLRHQGLRSWDVGSC*KSRILS Trigger: CGACAAGATCCTGCTCTTCAAACATGACCCAACATC...CCATGATCTTAGTCCCTGATGCCTCAACCTTGGAGCGATAAGGCTGGAGAGTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 90 bp | AACACATTCTCTGGTTTCAAGTCACAGTGGACGATGTTCTTGAAGTaGAGGTGTCTCAGCGCCACCAGGATCTGCGTGATAAGGAACTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTFSGFKSQWTMFLK*RCLSATRICVIRNL Trigger: CAAGTTCCTTATCACGCAGATCCTGGTGGCGCTGAGACACCTGCACTTCAAGAACATCGTCCACTGTGACTTGAAACCAGAGAATGTGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | AGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGGACCAGCTGCAGGAGGTaGGCTGATGTTGGGTCATGT | + |
|
Preference number: 5 (lower is better) Translates to: RSQFSKPVHPRNQTQVVRTSCRR*ADVGSC Trigger: ACATGACCCAACATCAGCCAACCTCCTGCAGCTGGT...CCTAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | CGGAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTGGCGGAATAGACCCTaGAGCAGTTTCTTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: RKESILQTGSSQESNSSCWRNRP*SSFLQA Trigger: GGCTTGCAAGAAACTGCTCAAGGGTCTATTCCGCCA...ACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTCCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TTTTATTGCCTGTGTTTATGTGGGCACTTATGGTGGTCAGGGGACAAACGGAAGGATGTTGGGTCATGTTaGAAGAGCAGGATCTTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: FYCLCLCGHLWWSGDKRKDVGSC*KSRILS Trigger: CGACAAGATCCTGCTCTTCAAACATGACCCAACATC...CTTCCGTTTGTCCCCTGACCACCATAAGTGCCCACATAAACACAGGCAATAAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | GTTCATCCCAGGAATCAAACTCAAGTTGTTAGGCTTGGTGGCAAGCGCCTTTACTTCTGTATCTGGTCATaGATGTCCTCGTCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: VHPRNQTQVVRLGGKRLYFCIWS*MSSSSL Trigger: CAATGAGGACGAGGACATCAATGACCAGATACAGAA...GTAAAGGCGCTTGCCACCAAGCCTAACAACTTGAGTTTGATTCCTGGGATGAAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | CCTCTACAAGAGTTCATTTCTGGGATGATGTGCAGGACTCCAAAGAAAGCAAGCTATCTGTTGGTCGTGTaGTTCTGGAAGAGGGTAATG | + |
|
Preference number: 5 (lower is better) Translates to: PLQEFISGMMCRTPKKASYLLVV*FWKRVM Trigger: CATTACCCTCTTCCAGAACAACACGACCAACAGATA...GCTTGCTTTCTTTGGAGTCCTGCACATCATCCCAGAAATGAACTCTTGTAGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | GAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTAGTGGGGAAGCGCAGTTaGTCAATGACCTTTACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: EGVNSPNRFIPGIKLKLLVGKRS*SMTFTA Trigger: TGCAGTAAAGGTCATTGACAAACTGCGCTTCCCCAC...TAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS-3UTR CAA 90 bp | TGCTGGGATTATATTATCACCATGGCCAGTGGGTGCTTCATTTGTTATAAAAAGTGGCGGAATAGACCCTaGAGCAGTTTCTTGCAAGCC | + |
|
Preference number: 5 (lower is better) Translates to: CWDYIITMASGCFICYKKWRNRP*SSFLQA Trigger: GGCTTGCAAGAAACTGCTCAAGGGTCTATTCCGCCA...CTTTTTATAACAAATGAAGCACCCACTGGCCATGGTGATAATATAATCCCAGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000086104.6 |
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| CDS-3UTR CAA 90 bp | GAAGGAGTCAATTCTCCAAACCGGTTCATCCCAGGAATCAAACTCAAGTTGTTATTCTGTATCTGGTCATaGATGTCCTCGTCCTCATTG | + |
|
Preference number: 5 (lower is better) Translates to: EGVNSPNRFIPGIKLKLLFCIWS*MSSSSL Trigger: CAATGAGGACGAGGACATCAATGACCAGATACAGAA...TAACAACTTGAGTTTGATTCCTGGGATGAACCGGTTTGGAGAATTGACTCCTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | CTGATGCGCTCAGCCAGCCCCTGCATCTCGTGGTCCTaGGGCAGACAGGCGCCACCCAGGTCCCCTTCTGCA | + |
|
Preference number: 6 (lower is better) Translates to: LMRSASPCISWS*GRQAPPRSPSA Trigger: TGCAGAAGGGGACCTGGGTGGCGCCTGTCTGCCGCAGGACCACGAGATGCAGGGGCTGGCTGAGCGCATCAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CCCTGGCGCACGAGGCCGAAGAGCATCTCCCCGCAGTaGTCACAGAAGGCGGGAGCGCGGTACGAGTGCACA | + |
|
Preference number: 6 (lower is better) Translates to: PWRTRPKSISPQ*SQKAGARYECT Trigger: TGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCACTGCGGGGAGATGCTCTTCGGCCTCGTGCGCCAGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | ACGACGAGGGTGGTCGGCGAGGAAGGAGGTCGGTGGTaGTACGGCTCAGCTCTTCGGCGGTGCAGGGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TTRVVGEEGGRW*YGSALRRCRVR Trigger: CCTTACCCTGCACCGCCGAAGAGCTGAGCCGTAGCACCACCGACCTCCTTCCTCGCCGACCACCCTCGTCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | ACGACGACGAGGGTGGTCGGCGAGGAAGGAGGTCGGTaGTGCTACGGCTCAGCTCTTCGGCGGTGCAGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: TTTRVVGEEGGR*CYGSALRRCRV Trigger: TACCCTGCACCGCCGAAGAGCTGAGCCGTAGCACCACCGACCTCCTTCCTCGCCGACCACCCTCGTCGTCGT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CTGTGCGGTGTGTGCCCCGGGGCACTGGGCGCATCTTaGAGGATAACGGGCATCAGTGCCTGGCGGATGGCT | + |
|
Preference number: 6 (lower is better) Translates to: LCGVCPGALGAS*RITGISAWRMA Trigger: AGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 72 bp | TCTGTGCGGTGTGTGCCCCGGGGCACTGGGCGCATCTaGGAGGATAACGGGCATCAGTGCCTGGCGGATGGC | + |
|
Preference number: 6 (lower is better) Translates to: SVRCVPRGTGRI*EDNGHQCLADG Trigger: GCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | GGCACTGGGCGCATCTTGGAGGATAACGGGCATCAGTaGCTGGCGGATGGCTGTCTCCCAACCCCGAACGGC | + |
|
Preference number: 6 (lower is better) Translates to: GTGRILEDNGHQ*LADGCLPTPNG Trigger: GCCGTTCGGGGTTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CAGGGTAAGGACTCGGAGCTGCCAAGGCGCACAGAATaGCCACTGGCCAGAGACGTGGATGACAGGCGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: QGKDSELPRRTE*PLARDVDDRRR Trigger: GCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCTTACCCTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CAA 90 bp | AGACGCTTGTCTGTGCGGTGTGTGCCCCGGGGCACTGGGCGCATCTaGGAGGATAACGGGCATCAGTGCCTGGCGGATGGCTGTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: RRLSVRCVPRGTGRI*EDNGHQCLADGCLP Trigger: TGGGAGACAGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | TCAGCTCTTCGGCGGTGCAGGGTAAGGACTCGGAGCTaGCAAGGCGCACAGAATGGCCACTGGCCAGAGACG | + |
|
Preference number: 6 (lower is better) Translates to: SALRRCRVRTRS*QGAQNGHWPET Trigger: CGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCTTACCCTGCACCGCCGAAGAGCTGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | GCCGGCAACAGCACGAACTCTCGGGTCAATCCGATCTaGATATGGAAGGAGACCCCCGAACCCGGAGCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGNSTNSRVNPI*IWKETPEPGAG Trigger: CCCGGCTCCGGGTTCGGGGGTCTCCTTCCATATCCAGATCGGATTGACCCGAGAGTTCGTGCTGTTGCCGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 72 bp | AGGACTCGGAGCTGCCAAGGCGCACAGAATGGCCACTaGCCAGAGACGTGGATGACAGGCGGCGCTTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: RTRSCQGAQNGH*PETWMTGGAFE Trigger: CTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCAGCTCCGAGTCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS CCA 72 bp | CTGGGCGCATCTTGGAGGATAACGGGCATCAGTGCCTaGCGGATGGCTGTCTCCCAACCCCGAACGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LGASWRITGISA*RMAVSQPRTAS Trigger: AGAGGCCGTTCGGGGTTGGGAGACAGCCATCCGCCAGGCACTGATGCCCGTTATCCTCCAAGATGCGCCCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS TCA 72 bp | TGTGGGTTGGTGCCCGGGGGTACGAGGCTGAAGTTCTaGGCCGGTTCCACCGCAAGGATTTCAGACAGCGGG | + |
|
Preference number: 6 (lower is better) Translates to: CGLVPGGTRLKF*AGSTARISDSG Trigger: CCCGCTGTCTGAAATCCTTGCGGTGGAACCGGCTCAGAACTTCAGCCTCGTACCCCCGGGCACCAACCCACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 72 bp | AAGGCGGGAGCGCGGTACGAGTGCACAGTGAGAGCATaGGGTCGGATCTGGAAATCCTCGAAGGTGGCCGAG | + |
|
Preference number: 6 (lower is better) Translates to: KAGARYECTVRA*GRIWKSSKVAE Trigger: CTCGGCCACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 72 bp | CCGCAGTGGTCACAGAAGGCGGGAGCGCGGTACGAGTaGACAGTGAGAGCATGCGGTCGGATCTGGAAATCC | + |
|
Preference number: 6 (lower is better) Translates to: PQWSQKAGARYE*TVRACGRIWKS Trigger: GGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACCACTGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
||
| CDS GCA 72 bp | CTGTTGGACACGGAGATACTCAGAGACGCTTGTCTGTaGGGTGTGTGCCCCGGGGCACTGGGCGCATCTTGG | + |
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Preference number: 6 (lower is better) Translates to: LLDTEILRDACL*GVCPGALGASW Trigger: CCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTCTCTGAGTATCTCCGTGTCCAACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | TGCCAAGGCGCACAGAATGGCCACTGGCCAGAGACGTaGATGACAGGCGGCGCTTTCGAGCACCACTGCAGT | + |
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Preference number: 6 (lower is better) Translates to: CQGAQNGHWPET*MTGGAFEHHCS Trigger: ACTGCAGTGGTGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 72 bp | GATCTGACTGTTGGACACGGAGATACTCAGAGACGCTaGTCTGTGCGGTGTGTGCCCCGGGGCACTGGGCGC | + |
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Preference number: 6 (lower is better) Translates to: DLTVGHGDTQRR*SVRCVPRGTGR Trigger: GCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTCTCTGAGTATCTCCGTGTCCAACAGTCAGATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | GGTCACAGAAGGCGGGAGCGCGGTACGAGTGCACAGTaGGAGCATGCGGTCGGATCTGGAAATCCTCGAAGG | + |
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Preference number: 6 (lower is better) Translates to: GHRRRERGTSAQ*EHAVGSGNPRR Trigger: CCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCGCGCTCCCGCCTTCTGTGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | CGAAGCAGTGTGGGTTGGTGCCCGGGGGTACGAGGCTaGAGTTCTGAGCCGGTTCCACCGCAAGGATTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSSVGWCPGVRG*SSEPVPPQGFQ Trigger: CTGAAATCCTTGCGGTGGAACCGGCTCAGAACTTCAGCCTCGTACCCCCGGGCACCAACCCACACTGCTTCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | TGCTGTAATGGACCACCCAGCCCTCCCGCAGGGTGGTaGTGGATTTCCGGGTCGTGTGTCGCACAGACTGTA | + |
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Preference number: 6 (lower is better) Translates to: CCNGPPSPPAGW*WISGSCVAQTV Trigger: TACAGTCTGTGCGACACACGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | GACGCCAGTAGTGCCGTTTCCTCAGTGTGTCCTTGTTaGTGTAATGGACCACCCAGCCCTCCCGCAGGGTGG | + |
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Preference number: 6 (lower is better) Translates to: DASSAVSSVCPC*CNGPPSPPAGW Trigger: CCACCCTGCGGGAGGGCTGGGTGGTCCATTACAGCAACAAGGACACACTGAGGAAACGGCACTACTGGCGTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | ACGGAGATACTCAGAGACGCTTGTCTGTGCGGTGTGTaGCCCGGGGCACTGGGCGCATCTTGGAGGATAACG | + |
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Preference number: 6 (lower is better) Translates to: TEILRDACLCGV*PGALGASWRIT Trigger: CGTTATCCTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTCTCTGAGTATCTCCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CGGTACGAGTGCACAGTGAGAGCATGCGGTCGGATCTaGAAATCCTCGAAGGTGGCCGAGGCCGACAGAACC | + |
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Preference number: 6 (lower is better) Translates to: RYECTVRACGRI*KSSKVAEADRT Trigger: GGTTCTGTCGGCCTCGGCCACCTTCGAGGATTTCCAGATCCGACCGCATGCTCTCACTGTGCACTCGTACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | TGTAATGGACCACCCAGCCCTCCCGCAGGGTGGTGCTaGATTTCCGGGTCGTGTGTCGCACAGACTGTACCA | + |
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Preference number: 6 (lower is better) Translates to: CNGPPSPPAGWC*ISGSCVAQTVP Trigger: TGGTACAGTCTGTGCGACACACGACCCGGAAATCCAGCACCACCCTGCGGGAGGGCTGGGTGGTCCATTACA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | AAGGCGCACAGAATGGCCACTGGCCAGAGACGTGGATaGCAGGCGGCGCTTTCGAGCACCACTGCAGTTGTT | + |
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Preference number: 6 (lower is better) Translates to: KAHRMATGQRRG*QAALSSTTAVV Trigger: AACAACTGCAGTGGTGCTCGAAAGCGCCGCCTGTCATCCACGTCTCTGGCCAGTGGCCATTCTGTGCGCCTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 90 bp | ATTCTCTTGGATCTGACTGTTGGACACGGAGATACTCAGAGACGCTaGTCTGTGCGGTGTGTGCCCCGGGGCACTGGGCGCATCTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: ILLDLTVGHGDTQRR*SVRCVPRGTGRILE Trigger: CTCCAAGATGCGCCCAGTGCCCCGGGGCACACACCGCACAGACAAGCGTCTCTGAGTATCTCCGTGTCCAACAGTCAGATCCAAGAGAAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | GCCTTCCTCTTCCTCACTGGCATGGAGAGCACTCTCTaGGTGGGAGCCGGGGATGACACCAGAATCCTCCAA | + |
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Preference number: 6 (lower is better) Translates to: AFLFLTGMESTL*VGAGDDTRILQ Trigger: TTGGAGGATTCTGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCATGCCAGTGAGGAAGAGGAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | GTAGGTGACATTGGCCGTGATGATCTCGAAGCAGTGTaGGTTGGTGCCCGGGGGTACGAGGCTGAAGTTCTG | + |
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Preference number: 6 (lower is better) Translates to: VGDIGRDDLEAV*VGARGYEAEVL Trigger: CAGAACTTCAGCCTCGTACCCCCGGGCACCAACCCACACTGCTTCGAGATCATCACGGCCAATGTCACCTAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CACTCGAGGTTCACAATCCCGGGGTGCCGTAGACTCTaGAGAATGGCCACTTCATTCCTGAGCTGGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: HSRFTIPGCRRL*RMATSFLSWLS Trigger: GGAGAGCCAGCTCAGGAATGAAGTGGCCATTCTCCAGAGTCTACGGCACCCCGGGATTGTGAACCTCGAGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 72 bp | TGTCTCAGCGCCACCAGGATCTGCGTGATAAGGAACTaGGTGAGACGCTCAGGAAGCCGGCCCTTCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: CLSATRICVIRN*VRRSGSRPFSL Trigger: CAGTGAGAAGGGCCGGCTTCCTGAGCGTCTCACCAAGTTCCTTATCACGCAGATCCTGGTGGCGCTGAGACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | TGGCATGGAGAGCACTCTCTGAGTGGGAGCCGGGGATaGCACCAGAATCCTCCAACTCATCTGAGATGGAGC | + |
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Preference number: 6 (lower is better) Translates to: WHGEHSLSGSRG*HQNPPTHLRWS Trigger: GCTCCATCTCAGATGAGTTGGAGGATTCTGGTGTCATCCCCGGCTCCCACTCAGAGAGTGCTCTCCATGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | TTCTGGTCCACGATAGAACAGGCTAGTTGCTTCACATaGGCCAACTCTGAGGCAGCCGGCAACAGCACGAAC | + |
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Preference number: 6 (lower is better) Translates to: FWSTIEQASCFT*ANSEAAGNSTN Trigger: GTTCGTGCTGTTGCCGGCTGCCTCAGAGTTGGCTCATGTGAAGCAACTAGCCTGTTCTATCGTGGACCAGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS TCA 72 bp | GGCTCTCCTGCTTGGTGGGGAAGCGCAGTTTGTCAATaGCCTTTACTGCAACGTCTCTGCCAGTCTTCCTGT | + |
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Preference number: 6 (lower is better) Translates to: GSPAWWGSAVCQ*PLLQRLCQSSC Trigger: ACAGGAAGACTGGCAGAGACGTTGCAGTAAAGGTCATTGACAAACTGCGCTTCCCCACCAAGCAGGAGAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | GTCTCAAACATGCACTCGAGGTTCACAATCCCGGGGTaGCGTAGACTCTGGAGAATGGCCACTTCATTCCTG | + |
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Preference number: 6 (lower is better) Translates to: VSNMHSRFTIPG*RRLWRMATSFL Trigger: CAGGAATGAAGTGGCCATTCTCCAGAGTCTACGGCACCCCGGGATTGTGAACCTCGAGTGCATGTTTGAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | CCATCACCACGAATACCTTCTCAGGAGTCTCAAACATaGACTCGAGGTTCACAATCCCGGGGTGCCGTAGAC | + |
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Preference number: 6 (lower is better) Translates to: PSPRIPSQESQT*TRGSQSRGAVD Trigger: GTCTACGGCACCCCGGGATTGTGAACCTCGAGTGCATGTTTGAGACTCCTGAGAAGGTATTCGTGGTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 90 bp | ATAAAGGCCGCGTTCTGTATCTGGTCATTGATGTCCTCGTCCTCATaGAAGGGGAACGTGCCACTAAGGCTCACGTACATGATCACACCC | + |
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Preference number: 6 (lower is better) Translates to: IKAAFCIWSLMSSSS*KGNVPLRLTYMITP Trigger: GGGTGTGATCATGTACGTGAGCCTTAGTGGCACGTTCCCCTTCAATGAGGACGAGGACATCAATGACCAGATACAGAACGCGGCCTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS GCA 72 bp | TCTGGTTTCAAGTCACAGTGGACGATGTTCTTGAAGTaGAGGTGTCTCAGCGCCACCAGGATCTGCGTGATA | + |
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Preference number: 6 (lower is better) Translates to: SGFKSQWTMFLK*RCLSATRICVI Trigger: TATCACGCAGATCCTGGTGGCGCTGAGACACCTGCACTTCAAGAACATCGTCCACTGTGACTTGAAACCAGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CCA 72 bp | CAGTGGCGATATCCACATTCTCTTGGATCTGACTGTTaGACACGGAGATACTCAGAGACGCTTGTCTGTGCG | + |
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Preference number: 6 (lower is better) Translates to: QWRYPHSLGSDC*TRRYSETLVCA Trigger: CGCACAGACAAGCGTCTCTGAGTATCTCCGTGTCCAACAGTCAGATCCAAGAGAATGTGGATATCGCCACTG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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| CDS CAA 72 bp | GCGTTCTGTATCTGGTCATTGATGTCCTCGTCCTCATaGAAGGGGAACGTGCCACTAAGGCTCACGTACATG | + |
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Preference number: 6 (lower is better) Translates to: AFCIWSLMSSSS*KGNVPLRLTYM Trigger: CATGTACGTGAGCCTTAGTGGCACGTTCCCCTTCAATGAGGACGAGGACATCAATGACCAGATACAGAACGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000086104.6 ENSMUST00000168093.9 |
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