Pregenerated sensors for PRKD1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002688Ensembl transcript IDs: ENSMUST00000002765.9
Found 132 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACCAAACACAATGGTGTCCTGGATAGGTCCTGGCTCTCACCAAAATaGGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGA | + |
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Preference number: 1 (lower is better) Translates to: TKHNGVLDRSWLSPK*GSGRKNTDLQRHSG Trigger: TCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTGAGAGCCAGGACCTATCCAGGACACCATTGTGTTTGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CCA 90 bp | TACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTaGATAGGTCCTGGCTCTCACCAAAATGAGGCTCTGGTAGGAAAA | + |
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Preference number: 1 (lower is better) Translates to: YNTTINGSTPNTMVS*IGPGSHQNEALVGK Trigger: TTTTCCTACCAGAGCCTCATTTTGGTGAGAGCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CCA 90 bp | CAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATaGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: QIIYSSRVCLQHHYQ*EHTKHNGVLDRSWL Trigger: GAGCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR GCA 90 bp | GAGTTGTTCATAGAACACCGGCAGATTATCTACTCCTCAAGAGTTTaGTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGT | + |
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Preference number: 1 (lower is better) Translates to: ELFIEHRQIIYSSRV*LQHHYQWEHTKHNG Trigger: ACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTTCTATGAACAACTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CCA 90 bp | ACACAGTTGGTCACACAAAATACAAATGCTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAACAGTGCTAACAGTTTAACAGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: TQLVTQNTNASVDLS*QLRYINSANSLTAL Trigger: CAAAGCTGTTAAACTGTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGACCAACTGTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR-3UTR TCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGTACAAATGCTTCTGTTaGTTTGTCTTGGCAACTCAG | + |
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Preference number: 2 (lower is better) Translates to: HQNEALVGKTLICKGTVEYKCFC*FVLATQ Trigger: CTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTA...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR-3UTR TCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCAGCTTTGTTCTCATCTaGCAGAAAATAATGGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: GRLSTPQEFAYNTTINGSSFVLI*QKIMAV Trigger: AACTGCCATTATTTTCTGTCAGATGAGAACAAAGCT...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR-3UTR TCA 90 bp | TCCGTGGATACAGTTGGTATTGTAAGAAAGGAAGAAATGCATCTGGTATGGATAACCTACTGTGCATTTTaGGTTGTTCATAGAACACCG | + |
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Preference number: 2 (lower is better) Translates to: SVDTVGIVRKEEMHLVWITYCAF*VVHRTP Trigger: CGGTGTTCTATGAACAACTCAAAATGCACAGTAGGT...TATCCATACCAGATGCATTTCTTCCTTTCTTACAATACCAACTGTATCCACGGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR TCA 72 bp | AATGGTGTCCTGGATAGGTCCTGGCTCTCACCAAAATaGGGCTCTGGTAGGAAAAACACTGATTTGCAAAGG | + |
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Preference number: 3 (lower is better) Translates to: NGVLDRSWLSPK*GSGRKNTDLQR Trigger: CCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTGAGAGCCAGGACCTATCCAGGACACCATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CCA 72 bp | TACTCCTCAAGAGTTTGCTTACAACACCACTATCAATaGGAGCACACCAAACACAATGGTGTCCTGGATAGG | + |
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Preference number: 3 (lower is better) Translates to: YSSRVCLQHHYQ*EHTKHNGVLDR Trigger: CCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR-3UTR CAA 90 bp | TTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTGTTTCCGGGAACTTTaGTTAATACAACACAGTTGG | + |
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Preference number: 3 (lower is better) Translates to: LQHHYQWEHTKHNGVLDRCFREL*LIQHSW Trigger: CCAACTGTGTTGTATTAACAAAAGTTCCCGGAAACA...CCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR-3UTR CAA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATAC | + |
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Preference number: 3 (lower is better) Translates to: QNEALVGKTLICKGTVETNASVD*SWQLRY Trigger: GTATCTGAGTTGCCAAGACAAATCAACAGAAGCATT...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CCA 72 bp | GTCACACAAAATACAAATGCTTCTGTTGATTTGTCTTaGCAACTCAGATACATCAACAGTGCTAACAGTTTA | + |
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Preference number: 3 (lower is better) Translates to: VTQNTNASVDLS*QLRYINSANSL Trigger: TAAACTGTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGAC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GTCAATCTGAGGACATTTACGCCCTCTCCTCATCTTTCATTCTCCCTGCCCCCACTCAGACTGATCAGGTaGGCCGGGTACTGCAGCCCC | + |
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Preference number: 4 (lower is better) Translates to: VNLRTFTPSPHLSFSLPPLRLIR*AGYCSP Trigger: GGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAG...TGGGGGCAGGGAGAATGAAAGATGAGGAGAGGGCGTAAATGTCCTCAGATTGAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTGAGGCAGCAGATGGAACGAGATaGCCCCCGCCGGGGCGGCCC | + |
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Preference number: 4 (lower is better) Translates to: AVAPHIEVHLLEFKYTEAADGTR*PPPGRP Trigger: GGGCCGCCCCGGCGGGGGGCATCTCGTTCCATCTGC...TGCCTCAGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | ACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCCGTCCATGTCATCCATaGGCCCACTGTTCCGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: TTINGSTPNTMVSWIGPGRPCHP*AHCSAH Trigger: GTGAGCGGAACAGTGGGCTCATGGATGACATGGACG...GCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | ACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCCCACATCCGGACCGATaGCACTGGGGAGAACACTGT | + |
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Preference number: 4 (lower is better) Translates to: TTINGSTPNTMVSWIGPGPHPDR*HWGEHC Trigger: ACAGTGTTCTCCCCAGTGGCATCGGTCCGGATGTGG...GCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACATCGCCAGAGGAGTCCTaGAGGAGCAGCACCGGCTCG | + |
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Preference number: 4 (lower is better) Translates to: QNEALVGKTLICKGTVETSPEES*RSSTGS Trigger: CGAGCCGGTGCTGCTCCTGCAGGACTCCTCTGGCGA...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | ACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCGTGTGTAGGAGTGGATaGCAAAGGTGTGTGGCACCT | + |
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Preference number: 4 (lower is better) Translates to: TTINGSTPNTMVSWIGPGVCRSG*QRCVAP Trigger: AGGTGCCACACACCTTTGTCATCCACTCCTACACAC...GCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGCGGCTCAGGCCGATCTaGAGATGGAACGAGATGCCC | + |
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Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVERLRPI*RWNEMP Trigger: GGGCATCTCGTTCCATCTGCAGATCGGCCTGAGCCG...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CTTAGAGCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTAGGTGCGCCGGGTACTaGAGCCCCTGCTCGCCTGCG | + |
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Preference number: 4 (lower is better) Translates to: LRAVAPHIEVHLLEFKYTRCAGY*SPCSPA Trigger: CGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCT...AGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGCTCTAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GTCAATCTGAGGACATTTACGCCCTCTCCTCATCTTTCATTCTCCCTGCCCCCAGGTGCGCAGCGTTTGTaGCAGTTGAATCTGCAATCT | + |
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Preference number: 4 (lower is better) Translates to: VNLRTFTPSPHLSFSLPPGAQRL*QLNLQS Trigger: AGATTGCAGATTCAACTGTCACAAACGCTGCGCACC...TGGGGGCAGGGAGAATGAAAGATGAGGAGAGGGCGTAAATGTCCTCAGATTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GAGTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCACTCAGCCGATGCTGTaGGGACAGTACCGAGTCCAG | + |
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Preference number: 4 (lower is better) Translates to: EFAYNTTINGSTPNTMVSTQPML*GQYRVQ Trigger: CTGGACTCGGTACTGTCCGCACAGCATCGGCTGAGT...GGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | ACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCCAGTATCTTGGACCATaGCCTCGTCCATGTCATCCA | + |
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Preference number: 4 (lower is better) Translates to: TTINGSTPNTMVSWIGPGQYLGP*PRPCHP Trigger: TGGATGACATGGACGAGGCCATGGTCCAAGATACTG...GCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCTCACATTTAAGGCCTTaGCGCACCAGCCCCCACAGC | + |
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Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSSHLRP*RTSPHS Trigger: GCTGTGGGGGCTGGTGCGTCAAGGCCTTAAATGTGA...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GAGTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCCAGTACCGAGTCCAGTaGGGGACACATTGGAGAGTC | + |
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Preference number: 4 (lower is better) Translates to: EFAYNTTINGSTPNTMVSQYRVQ*GTHWRV Trigger: GACTCTCCAATGTGTCCCTCACTGGACTCGGTACTG...GGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GAGTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCACTGCACTACCCTCATaGGCGGGATGTTGTTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: EFAYNTTINGSTPNTMVSTALPS*AGCCCS Trigger: CGAGCAACAACATCCCGCTCATGAGGGTAGTGCAGT...GGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGACTCCTCCGCTTCGTGTaGTTCACAGACTGCACTACC | + |
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Preference number: 4 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRLLRFV*FTDCTT Trigger: GGTAGTGCAGTCTGTGAAGCACACGAAGCGGAGGAG...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATATCCGCAGTGTGTCCTTaGTGGTGTAGTGGACCATCC | + |
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Preference number: 4 (lower is better) Translates to: AYNTTINGSTPNTMVSWISAVCP*WCSGPS Trigger: GGATGGTCCACTACACCAGCAAGGACACACTGCGGA...TATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATCAGCCCCTGCTCGCCTaGGTACTGTTCCCACCTGGA | + |
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Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINQPLLA*VLFPPG Trigger: TCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTG...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | GCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATACCGGACCGATGCCACTaGGGAGAACACTGTTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: AYNTTINGSTPNTMVSWIPDRCH*GEHCCL Trigger: CAAACAACAGTGTTCTCCCCAGTGGCATCGGTCCGG...TATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGGCGATTTTCACCAGCTaGAGGATGTTGTCGGAGGCA | + |
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Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVEAIFTS*RMLSEA Trigger: TGCCTCCGACAACATCCTTCAGCTGGTGAAAATCGC...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | TCTCACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGGGGCTCTGTATGAATaGACGAAGAGAGCATGGGGC | + |
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Preference number: 4 (lower is better) Translates to: SHQNEALVGKTLICKGTVGALYE*TKRAWG Trigger: GCCCCATGCTCTCTTCGTTCATTCATACAGAGCCCC...CACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGTGCTCGTTGAAGGGCTaGTGGTTCTGTTGGAGTCCT | + |
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Preference number: 4 (lower is better) Translates to: VCLQHHYQWEHTKHNGVLCSLKG*WFCWSP Trigger: AGGACTCCAACAGAACCATCAGCCCTTCAACGAGCA...CAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAAGGGAAAGGGTCGGCTaGTGCCAGCAACACATTTTC | + |
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Preference number: 4 (lower is better) Translates to: AYNTTINGSTPNTMVSWIRERVG*CQQHIF Trigger: GAAAATGTGTTGCTGGCATCAGCCGACCCTTTCCCT...TATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGTGGGGTACCCACCACTaGCCTCCTAAAAGACTTCTC | + |
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Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVEWGTHH*PPKRLL Trigger: GAGAAGTCTTTTAGGAGGTCAGTGGTGGGTACCCCA...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACACTGCAATCTTTGCACTaGAAGCCCTGCCGGAAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QNEALVGKTLICKGTVETLQSLH*KPCRKR Trigger: CCTCTTCCGGCAGGGCTTGCAGTGCAAAGATTGCAG...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCGTGTGCTTCACAGACTaGACTACCCTCATGAGCGGG | + |
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Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSVCFTD*TTLMSG Trigger: CCCGCTCATGAGGGTAGTGCAGTCTGTGAAGCACAC...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | TCCGTGGATACAGTTGGTATTGTAAGAAAGGAAGAAATGCATCTGGTATGGATAGGGTACTGCAGCCCCTaGTCGCCTGCGTACTGTTCC | + |
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Preference number: 4 (lower is better) Translates to: SVDTVGIVRKEEMHLVWIGYCSP*SPAYCS Trigger: GGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCC...TATCCATACCAGATGCATTTCTTCCTTTCTTACAATACCAACTGTATCCACGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGACTCCTGGTCTGCATCTaGATCTTGCATCTCTGCACC | + |
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Preference number: 4 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRLLVCI*ILHLCT Trigger: GGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAG...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | TCCGTGGATACAGTTGGTATTGTAAGAAAGGAAGAAATGCATCTGGTATGGATACCACCTCCCACATCCTaGCCACATCCGGACCGATGC | + |
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Preference number: 4 (lower is better) Translates to: SVDTVGIVRKEEMHLVWIPPPTS*PHPDRC Trigger: GCATCGGTCCGGATGTGGCCAGGATGTGGGAGGTGG...TATCCATACCAGATGCATTTCTTCCTTTCTTACAATACCAACTGTATCCACGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCCGTACTGTTCCCACCTaGAGTCATCGCTTTCGTGGG | + |
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Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSRTVPT*SHRFRG Trigger: CCCACGAAAGCGATGACTCCAGGTGGGAACAGTACG...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | GAGTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTCAGGACTGTCGCTGTaGCTAGCACTCAGACTGATC | + |
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Preference number: 4 (lower is better) Translates to: EFAYNTTINGSTPNTMVSSGLSL*LALRLI Trigger: GATCAGTCTGAGTGCTAGCCACAGCGACAGTCCTGA...GGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGATCGGAGGCAGGATCGTaGCGAAAAAGCAGGATCTTA | + |
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Preference number: 4 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRSEAGS*RKSRIL Trigger: TAAGATCCTGCTTTTTCGGCACGATCCTGCCTCCGA...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGATCTGCATCTGGATCTTaGATCTCTGCACCTCCACTC | + |
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Preference number: 4 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRSASGS*ISAPPL Trigger: GAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGA...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATACGGGCATAAGAGCATaGTGGATGGCCACCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINTGIRA*WMATSH Trigger: GTGGGAGGTGGCCATCCAGCATGCTCTTATGCCCGT...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GTCAATCTGAGGACATTTACGCCCTCTCCTCATCTTTCATTCTCCCTGCCCCCATGGATACATGAAGGCTaGATTCTGGATCTGATCATG | + |
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Preference number: 4 (lower is better) Translates to: VNLRTFTPSPHLSFSLPPWIHEG*ILDLIM Trigger: CATGATCAGATCCAGAATGCAGCCTTCATGTATCCA...TGGGGGCAGGGAGAATGAAAGATGAGGAGAGGGCGTAAATGTCCTCAGATTGAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCCATTCGGGGAACTTCTaGTCCACGATGGAACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSHSGNF*STMEQA Trigger: GGCTTGTTCCATCGTGGACCAGAAGTTCCCCGAATG...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATAGAACTGGCAGACCGTaGGCCGTGTGTAGGAGTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINRTGRP*AVCRSG Trigger: TCCACTCCTACACACGGCCCACGGTCTGCCAGTTCT...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGCCGGAAGAGGCCCTTaGGGAGCTTCTTACAGAACT | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINAGRGP*GASYRT Trigger: AGTTCTGTAAGAAGCTCCTCAAGGGCCTCTTCCGGC...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGGTGATTTCAAAACAATaGGGAGTCGCTCCAACGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVEVISKQ*GVAPTG Trigger: TCCCGTTGGAGCGACTCCTCATTGTTTTGAAATCAC...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | CTTAGAGCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTGCATGGGGCCGGATCTaGAAGTCTTCGAAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LRAVAPHIEVHLLEFKYTAWGRI*KSSKVA Trigger: AGCCACCTTCGAAGACTTCCAGATCCGGCCCCATGC...AGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGCTCTAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | ACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGTCCTGGCCTCCCTGTGTCATTTTaGAAGAGTGTTATGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: TTINGSTPNTMVSWIGPGLPVSF*KSVMHL Trigger: CAAATGCATAACACTCTTCCAAAATGACACAGGGAG...GCCAGGACCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | TCCGTGGATACAGTTGGTATTGTAAGAAAGGAAGAAATGCATCTGGTATGGATATGGATCTTGCATCTCTaGACCTCCACTCTGGCCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVDTVGIVRKEEMHLVWIWILHL*TSTLAL Trigger: GAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCA...TATCCATACCAGATGCATTTCTTCCTTTCTTACAATACCAACTGTATCCACGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR CCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGGTTGTTTGGTACTTTTaGTGCGCAGCGTTTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVEVVWYF*CAAFVT Trigger: TGTCACAAACGCTGCGCACCAAAAGTACCAAACAAC...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTGAGGCAACAGGACCACTTCAATaGGATCACCCTCCTGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: AVAPHIEVHLLEFKYTEATGPLQ*DHPPGY Trigger: ATATCCAGGAGGGTGATCTCATTGAAGTGGTCCTGT...TGCCTCAGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGAGCGTTTGTGACAGTTaGATCTGCAATCTTTGCACT | + |
|
Preference number: 4 (lower is better) Translates to: HQNEALVGKTLICKGTVESVCDS*ICNLCT Trigger: AGTGCAAAGATTGCAGATTCAACTGTCACAAACGCT...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACAACACATTTTCTGGCTTaGGGTCACAGTGAACGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QNEALVGKTLICKGTVETTHFLA*GHSERC Trigger: ACATCGTTCACTGTGACCTCAAGCCAGAAAATGTGT...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGTTGGGTGGATACATaGAGGCTGCATTCTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINGWVDT*RLHSGS Trigger: AGATCCAGAATGCAGCCTTCATGTATCCACCCAACC...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCCGTCCGATGTATGACTaGGAATTTGACCTCTTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSRPMYD*EFDLFS Trigger: TGAGAAGAGGTCAAATTCGCAGTCATACATCGGACG...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACAGTTTGGTACTTTTGGTaGGCAGCGTTTGTGACAGTT | + |
|
Preference number: 4 (lower is better) Translates to: QNEALVGKTLICKGTVETVWYFW*AAFVTV Trigger: AACTGTCACAAACGCTGCGCACCAAAAGTACCAAAC...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | TCTCACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGTGTGTTCTGGCAACCTaGCCTTTTCACTTGACAAGA | + |
|
Preference number: 4 (lower is better) Translates to: SHQNEALVGKTLICKGTVCVLAT*PFHLTR Trigger: TCTTGTCAAGTGAAAAGGGCAGGTTGCCAGAACACA...CACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | TCTCACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGATGACAAAGGTGTGTaGCACCTTCACCTTAGACAT | + |
|
Preference number: 4 (lower is better) Translates to: SHQNEALVGKTLICKGTVDDKGV*HLHLRH Trigger: ATGTCTAAGGTGAAGGTGCCACACACCTTTGTCATC...CACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTGAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR TCA 90 bp | CTTAGAGCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTAGCTGGGGCTCTGTATaGATGAACGAAGAGAGCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRAVAPHIEVHLLEFKYTSWGSV*MNEESM Trigger: CATGCTCTCTTCGTTCATTCATACAGAGCCCCAGCT...AGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGCTCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATAGATCAATGGCTTCATaGGAAATCTCCTTCCACGGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGRLSTPQEFAYNTTINRSMAS*EISFHG Trigger: CCCGTGGAAGGAGATTTCTCATGAAGCCATTGATCT...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR GCA 90 bp | GTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGTTTGGAAGAGTGTTATaGATTTGCTGTCCAATCTCC | + |
|
Preference number: 4 (lower is better) Translates to: VCLQHHYQWEHTKHNGVLFGRVL*ICCPIS Trigger: GGAGATTGGACAGCAAATGCATAACACTCTTCCAAA...CAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CCA 90 bp | GAGTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTCCAGCATGTCTCCATaGAGTTTTTCCATAACAACA | + |
|
Preference number: 4 (lower is better) Translates to: EFAYNTTINGSTPNTMVSSSMSP*SFSITT Trigger: TGTTGTTATGGAAAAACTCCATGGAGACATGCTGGA...GGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR TCA 90 bp | TCCGTGGATACAGTTGGTATTGTAAGAAAGGAAGAAATGCATCTGGTATGGATATCCTGTAGCCAAGGGTaGCTCAAGGTTTTATCCACA | + |
|
Preference number: 4 (lower is better) Translates to: SVDTVGIVRKEEMHLVWISCSQG*LKVLST Trigger: TGTGGATAAAACCTTGAGTCACCCTTGGCTACAGGA...TATCCATACCAGATGCATTTCTTCCTTTCTTACAATACCAACTGTATCCACGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCTTTGATAGACTGTGCTaGTATCCACATTTTCCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GRLSTPQEFAYNTTINGSFDRLC*YPHFPE Trigger: TTCAGGAAAATGTGGATATCAGCACAGTCTATCAAA...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR GCA 90 bp | CGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGTCAGATGGAGACTTTTaGTCAAAGCCAGGGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: RELLLIQHSWSHKIQMLLSDGDF*SKPGLT Trigger: TGTGAGCCCTGGCTTTGAGCAAAAGTCTCCATCTGA...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGCTGAATCTGGCAATTTaGAACGGAAATGCTCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RELLLIQHSWSHKIQMLLLNLAI*NGNAHR Trigger: TCTGTGAGCATTTCCGTTTCAAATTGCCAGATTCAG...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGAAGACTTCTCTCCAATaGTCCGGGCAAAACCAAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RELLLIQHSWSHKIQMLLKTSLQ*SGQNQN Trigger: ATTTTGGTTTTGCCCGGATCATTGGAGAGAAGTCTT...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| 3UTR CAA 72 bp | CAGTTGGTCACACAAAATACAAATGCTTCTGTTGATTaGTCTTGGCAACTCAGATACATCAACAGTGCTAAC | + |
|
Preference number: 4 (lower is better) Translates to: QLVTQNTNASVD*SWQLRYINSAN Trigger: GTTAGCACTGTTGATGTATCTGAGTTGCCAAGACAAATCAACAGAAGCATTTGTATTTTGTGTGACCAACTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR TCA 90 bp | CTTAGAGCAGTAGCTCCACATATTGAGGTGCACTTACTAGAGTTTAAATACACTACGATGTTTTTAAAATaGAGATGTCGCAAAGCCACT | + |
|
Preference number: 4 (lower is better) Translates to: LRAVAPHIEVHLLEFKYTTMFLK*RCRKAT Trigger: AGTGGCTTTGCGACATCTTCATTTTAAAAACATCGT...AGTGTATTTAAACTCTAGTAAGTGCACCTCAATATGTGGAGCTACTGCTCTAAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | CTGTCGCTGTGGCTAGCACTCAGACTGATCAGGTGCGCCGGGTACTaGAGCCCCTGCTCGCCTGCGTACTGTTCCCACCTGGAGTCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LSLWLALRLIRCAGY*SPCSPAYCSHLESS Trigger: CGATGACTCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAGTGCTAGCCACAGCGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | TGGCTAGCACTCAGACTGATCAGGTGCGCCGGGTACTGCAGCCCCTaGTCGCCTGCGTACTGTTCCCACCTGGAGTCATCGCTTTCGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLALRLIRCAGYCSP*SPAYCSHLESSLSW Trigger: CCACGAAAGCGATGACTCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAGTGCTAGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 90 bp | GAGCCAACAGAGGAGCCCTTGGGGATGACGGGCATAAGAGCATGCTaGATGGCCACCTCCCACATCCTGGCCACATCCGGACCGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: EPTEEPLGMTGIRAC*MATSHILATSGPMP Trigger: TGGCATCGGTCCGGATGTGGCCAGGATGTGGGAGGTGGCCATCCAGCATGCTCTTATGCCCGTCATCCCCAAGGGCTCCTCTGTTGGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | CATGCTGGATGGCCACCTCCCACATCCTGGCCACATCCGGACCGATaGCACTGGGGAGAACACTGTTGTTTGGTGGGGAACTTGATGGGT | + |
|
Preference number: 5 (lower is better) Translates to: HAGWPPPTSWPHPDR*HWGEHCCLVGNLMG Trigger: ACCCATCAAGTTCCCCACCAAACAACAGTGTTCTCCCCAGTGGCATCGGTCCGGATGTGGCCAGGATGTGGGAGGTGGCCATCCAGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | ACTCAGACTGATCAGGTGCGCCGGGTACTGCAGCCCCTGCTCGCCTaGGTACTGTTCCCACCTGGAGTCATCGCTTTCGTGGGTAATATA | + |
|
Preference number: 5 (lower is better) Translates to: TQTDQVRRVLQPLLA*VLFPPGVIAFVGNI Trigger: TATATTACCCACGAAAGCGATGACTCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 90 bp | TCTGCACCTCCACTCTGGCCCTCTGCCAAAGCCATCTCAGTATCTTaGACCATGGCCTCGTCCATGTCATCCATGAGCCCACTGTTCCGC | + |
|
Preference number: 5 (lower is better) Translates to: SAPPLWPSAKAISVS*TMASSMSSMSPLFR Trigger: GCGGAACAGTGGGCTCATGGATGACATGGACGAGGCCATGGTCCAAGATACTGAGATGGCTTTGGCAGAGGGCCAGAGTGGAGGTGCAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 90 bp | TCCTCCTGGTCTGCATCTGGATCTTGCATCTCTGCACCTCCACTCTaGCCCTCTGCCAAAGCCATCTCAGTATCTTGGACCATGGCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: SSWSASGSCISAPPL*PSAKAISVSWTMAS Trigger: CGAGGCCATGGTCCAAGATACTGAGATGGCTTTGGCAGAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | TCCTTCATCACAGTGCTGCTCCTCCGCTTCGTGTGCTTCACAGACTaGACTACCCTCATGAGCGGGATGTTGTTGCTCGTTGAAGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SFITVLLLRFVCFTD*TTLMSGMLLLVEGL Trigger: CAGCCCTTCAACGAGCAACAACATCCCGCTCATGAGGGTAGTGCAGTCTGTGAAGCACACGAAGCGGAGGAGCAGCACTGTGATGAAGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | GGTTCTGTTGGAGTCCTCCTGGTCTGCATCTGGATCTTGCATCTCTaGACCTCCACTCTGGCCCTCTGCCAAAGCCATCTCAGTATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: GSVGVLLVCIWILHL*TSTLALCQSHLSIL Trigger: CAAGATACTGAGATGGCTTTGGCAGAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 90 bp | ATGTTGTTGCTCGTTGAAGGGCTGATGGTTCTGTTGGAGTCCTCCTaGTCTGCATCTGGATCTTGCATCTCTGCACCTCCACTCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: MLLLVEGLMVLLESS*SASGSCISAPPLWP Trigger: GGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAACCATCAGCCCTTCAACGAGCAACAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | GTCAATCTGAGGACATTTACGCCCTCTCCTCATCTTTCATTCTCCCTGCCCCCAATGAGCGGGATGTTGTaGCTCGTTGAAGGGCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: VNLRTFTPSPHLSFSLPPMSGML*LVEGLM Trigger: CATCAGCCCTTCAACGAGCAACAACATCCCGCTCAT...TGGGGGCAGGGAGAATGAAAGATGAGGAGAGGGCGTAAATGTCCTCAGATTGAC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS TCA 90 bp | AAGGTGTGTGGCACCTTCACCTTAGACATCAGGAGCTTGTCGAGCTaGATCGGCCGTCCGATGTATGACTGCGAATTTGACCTCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: KVCGTFTLDIRSLSS*IGRPMYDCEFDLFS Trigger: TGAGAAGAGGTCAAATTCGCAGTCATACATCGGACGGCCGATTCAGCTCGACAAGCTCCTGATGTCTAAGGTGAAGGTGCCACACACCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGAGGGCTGATGGTTCTGTaGGAGTCCTCCTGGTCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRGLMVL*ESSWSA Trigger: TGCAGACCAGGAGGACTCCAACAGAACCATCAGCCC...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR CAA 90 bp | GTCAATCTGAGGACATTTACGCCCTCTCCTCATCTTTCATTCTCCCTGCCCCCACTGGGGAGAACACTGTaGTTTGGTGGGGAACTTGAT | + |
|
Preference number: 5 (lower is better) Translates to: VNLRTFTPSPHLSFSLPPLGRTL*FGGELD Trigger: ATCAAGTTCCCCACCAAACAACAGTGTTCTCCCCAG...TGGGGGCAGGGAGAATGAAAGATGAGGAGAGGGCGTAAATGTCCTCAGATTGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS GCA 90 bp | TTTGACCTCTTCTCACGGCCGATAAATGACTCAGATGGAGACTTTTaGTCAAAGCCAGGGCTCACAGGAGACAGTAAAGGCTCATCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: FDLFSRPINDSDGDF*SKPGLTGDSKGSSG Trigger: CCCTGATGAGCCTTTACTGTCTCCTGTGAGCCCTGGCTTTGAGCAAAAGTCTCCATCTGAGTCATTTATCGGCCGTGAGAAGAGGTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR CAA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGTGCCGGAAGAGGCCCTaGAGGAGCTTCTTACAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: HQNEALVGKTLICKGTVECRKRP*RSFLQN Trigger: GTTCTGTAAGAAGCTCCTCAAGGGCCTCTTCCGGCA...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS GCA 90 bp | TGTAGTACCGGCTCCCTGTGTCATTTTGGAAGAGTGTTATGCATTTaGTGTCCAATCTCCAGTAGTGCCTTTTCCGCAGTGTGTCCTTGC | + |
|
Preference number: 5 (lower is better) Translates to: CSTGSLCHFGRVLCI*CPISSSAFSAVCPC Trigger: GCAAGGACACACTGCGGAAAAGGCACTACTGGAGATTGGACAGCAAATGCATAACACTCTTCCAAAATGACACAGGGAGCCGGTACTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR CAA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCTTCACATTTAAGGCCTaGACGCACCAGCCCCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GRLSTPQEFAYNTTINGSFTFKA*THQPPQ Trigger: CTGTGGGGGCTGGTGCGTCAAGGCCTTAAATGTGAA...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
||
| CDS-3UTR CAA 90 bp | GTTTGCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGCTCAGATGGAGACTTTaGCTCAAAGCCAGGGCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: VCLQHHYQWEHTKHNGVLLRWRL*LKARAH Trigger: GTGAGCCCTGGCTTTGAGCAAAAGTCTCCATCTGAG...CAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGCAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | GCTTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAATCTCCTTCCACGGGTaGGGTGGATACATGAAGGCT | + |
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Preference number: 5 (lower is better) Translates to: AYNTTINGSTPNTMVSWIISFHG*GGYMKA Trigger: AGCCTTCATGTATCCACCCAACCCGTGGAAGGAGAT...TATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CACCAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGTGTATGACTGCGAATTaGACCTCTTCTCACGGCCGA | + |
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Preference number: 5 (lower is better) Translates to: HQNEALVGKTLICKGTVECMTAN*TSSHGR Trigger: TCGGCCGTGAGAAGAGGTCAAATTCGCAGTCATACA...CTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 90 bp | TTTCCTTGTAGTACCGGCTCCCTGTGTCATTTTGGAAGAGTGTTATaGATTTGCTGTCCAATCTCCAGTAGTGCCTTTTCCGCAGTGTGT | + |
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Preference number: 5 (lower is better) Translates to: FPCSTGSLCHFGRVL*ICCPISSSAFSAVC Trigger: ACACACTGCGGAAAAGGCACTACTGGAGATTGGACAGCAAATGCATAACACTCTTCCAAAATGACACAGGGAGCCGGTACTACAAGGAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | TTACAACACCACTATCAATGGGAGCACACCAAACACAATGGTGTCCTGGATAGGCCTCCTGGATATCACTaGCGATTTTCACCAGCTGAA | + |
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Preference number: 5 (lower is better) Translates to: LQHHYQWEHTKHNGVLDRPPGYH*RFSPAE Trigger: TTCAGCTGGTGAAAATCGCAAGTGATATCCAGGAGG...CCTATCCAGGACACCATTGTGTTTGGTGTGCTCCCATTGATAGTGGTGTTGTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGAACTTCACCCAAGCAGTaGTTTGGTACTTTTGGTGCG | + |
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Preference number: 5 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRTSPKQ*FGTFGA Trigger: CGCACCAAAAGTACCAAACAACTGCTTGGGTGAAGT...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | GGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATGGGAGCAGTTGTTTGGTACTTTaGGTGCGCAGCGTTTGTGAC | + |
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Preference number: 5 (lower is better) Translates to: GRLSTPQEFAYNTTINGSSCLVL*VRSVCD Trigger: GTCACAAACGCTGCGCACCAAAAGTACCAAACAACT...GCTCCCATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CACAACAGACAGGCAGAACAGTTGAAACCACACAGTAGAACTGTTTCCATGCGACTAAGTAATTCTCCATaGATGGTCACTTCACCCAAG | + |
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Preference number: 5 (lower is better) Translates to: HNRQAEQLKPHSRTVSMRLSNSP*MVTSPK Trigger: CTTGGGTGAAGTGACCATCAATGGAGAATTACTTAG...TCGCATGGAAACAGTTCTACTGTGTGGTTTCAACTGTTCTGCCTGTCTGTTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATTTCCGCTCACTGTCATaGTCATCACTCCCTTCTTCC | + |
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Preference number: 5 (lower is better) Translates to: NTGRLSTPQEFAYNTTINFRSLS*SSLPSS Trigger: GGAAGAAGGGAGTGATGACAATGACAGTGAGCGGAA...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CAAAATGAGGCTCTGGTAGGAAAAACACTGATTTGCAAAGGCACAGTGGAGACACTCACAGAAATATCTTaGTGTGAGTTGGATCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: QNEALVGKTLICKGTVETLTEIS*CELDPE Trigger: CTCCGGATCCAACTCACACAAAGATATTTCTGTGAG...TGTCTCCACTGTGCCTTTGCAAATCAGTGTTTTTCCTACCAGAGCCTCATTTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | AACACCGGCAGATTATCTACTCCTCAAGAGTTTGCTTACAACACCACTATCAATCCTGAATCTGGCAATTaGAAACGGAAATGCTCACAG | + |
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Preference number: 5 (lower is better) Translates to: NTGRLSTPQEFAYNTTINPESGN*KRKCSQ Trigger: CTGTGAGCATTTCCGTTTCAAATTGCCAGATTCAGG...ATTGATAGTGGTGTTGTAAGCAAACTCTTGAGGAGTAGATAATCTGCCGGTGTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS-3UTR CAA 90 bp | CGGGAACTTTTGTTAATACAACACAGTTGGTCACACAAAATACAAATGCTTCTGGCTCCCTGTGTCATTTaGGAAGAGTGTTATGCATTT | + |
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Preference number: 5 (lower is better) Translates to: RELLLIQHSWSHKIQMLLAPCVI*EECYAF Trigger: AAATGCATAACACTCTTCCAAAATGACACAGGGAGC...CAGAAGCATTTGTATTTTGTGTGACCAACTGTGTTGTATTAACAAAAGTTCCCG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | GATCAGGTGCGCCGGGTACTGCAGCCCCTGCTCGCCTaGGTACTGTTCCCACCTGGAGTCATCGCTTTCGTG | + |
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Preference number: 6 (lower is better) Translates to: DQVRRVLQPLLA*VLFPPGVIAFV Trigger: CACGAAAGCGATGACTCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | CTCAGACTGATCAGGTGCGCCGGGTACTGCAGCCCCTaGTCGCCTGCGTACTGTTCCCACCTGGAGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: LRLIRCAGYCSP*SPAYCSHLESS Trigger: CGATGACTCCAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | TGGCTAGCACTCAGACTGATCAGGTGCGCCGGGTACTaGAGCCCCTGCTCGCCTGCGTACTGTTCCCACCTG | + |
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Preference number: 6 (lower is better) Translates to: WLALRLIRCAGY*SPCSPAYCSHL Trigger: CAGGTGGGAACAGTACGCAGGCGAGCAGGGGCTGCAGTACCCGGCGCACCTGATCAGTCTGAGTGCTAGCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | TGGCCACCTCCCACATCCTGGCCACATCCGGACCGATaGCACTGGGGAGAACACTGTTGTTTGGTGGGGAAC | + |
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Preference number: 6 (lower is better) Translates to: WPPPTSWPHPDR*HWGEHCCLVGN Trigger: GTTCCCCACCAAACAACAGTGTTCTCCCCAGTGGCATCGGTCCGGATGTGGCCAGGATGTGGGAGGTGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | CTCTGCACCTCCACTCTGGCCCTCTGCCAAAGCCATCTCAGTATCTaGGACCATGGCCTCGTCCATGTCATCCATGAGCCCACTGTTCCG | + |
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Preference number: 6 (lower is better) Translates to: LCTSTLALCQSHLSI*DHGLVHVIHEPTVP Trigger: CGGAACAGTGGGCTCATGGATGACATGGACGAGGCCATGGTCCAAGATACTGAGATGGCTTTGGCAGAGGGCCAGAGTGGAGGTGCAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | GGAGTCCTCCTGGTCTGCATCTGGATCTTGCATCTCTaGACCTCCACTCTGGCCCTCTGCCAAAGCCATCTC | + |
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Preference number: 6 (lower is better) Translates to: GVLLVCIWILHL*TSTLALCQSHL Trigger: GAGATGGCTTTGGCAGAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 72 bp | CCTCCCACATCCTGGCCACATCCGGACCGATGCCACTaGGGAGAACACTGTTGTTTGGTGGGGAACTTGATG | + |
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Preference number: 6 (lower is better) Translates to: PPTSWPHPDRCH*GEHCCLVGNLM Trigger: CATCAAGTTCCCCACCAAACAACAGTGTTCTCCCCAGTGGCATCGGTCCGGATGTGGCCAGGATGTGGGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | TTGTGTGAGTTGGATCCGGAGCCAACAGAGGAGCCCTaGGGGATGACGGGCATAAGAGCATGCTGGATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LCELDPEPTEEP*GMTGIRACWMA Trigger: GGCCATCCAGCATGCTCTTATGCCCGTCATCCCCAAGGGCTCCTCTGTTGGCTCCGGATCCAACTCACACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 72 bp | GCTGATGGTTCTGTTGGAGTCCTCCTGGTCTGCATCTaGATCTTGCATCTCTGCACCTCCACTCTGGCCCTC | + |
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Preference number: 6 (lower is better) Translates to: ADGSVGVLLVCI*ILHLCTSTLAL Trigger: GAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAACCATCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | TCCACTCTGGCCCTCTGCCAAAGCCATCTCAGTATCTaGGACCATGGCCTCGTCCATGTCATCCATGAGCCC | + |
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Preference number: 6 (lower is better) Translates to: STLALCQSHLSI*DHGLVHVIHEP Trigger: GGGCTCATGGATGACATGGACGAGGCCATGGTCCAAGATACTGAGATGGCTTTGGCAGAGGGCCAGAGTGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | GAAATATCTTTGTGTGAGTTGGATCCGGAGCCAACAGAGGAGCCCTaGGGGATGACGGGCATAAGAGCATGCTGGATGGCCACCTCCCAC | + |
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Preference number: 6 (lower is better) Translates to: EISLCELDPEPTEEP*GMTGIRACWMATSH Trigger: GTGGGAGGTGGCCATCCAGCATGCTCTTATGCCCGTCATCCCCAAGGGCTCCTCTGTTGGCTCCGGATCCAACTCACACAAAGATATTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | GTTCTGTTGGAGTCCTCCTGGTCTGCATCTGGATCTTaGATCTCTGCACCTCCACTCTGGCCCTCTGCCAAA | + |
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Preference number: 6 (lower is better) Translates to: VLLESSWSASGS*ISAPPLWPSAK Trigger: TTTGGCAGAGGGCCAGAGTGGAGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | ACAGTGCTGCTCCTCCGCTTCGTGTGCTTCACAGACTaGACTACCCTCATGAGCGGGATGTTGTTGCTCGTT | + |
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Preference number: 6 (lower is better) Translates to: TVLLLRFVCFTD*TTLMSGMLLLV Trigger: AACGAGCAACAACATCCCGCTCATGAGGGTAGTGCAGTCTGTGAAGCACACGAAGCGGAGGAGCAGCACTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CCA 72 bp | TCACAGGAGACAGTAAAGGCTCATCAGGGACACTGGTaGAGAACTCAGCCGATGCTGTGCGGACAGTACCGA | + |
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Preference number: 6 (lower is better) Translates to: SQETVKAHQGHW*RTQPMLCGQYR Trigger: TCGGTACTGTCCGCACAGCATCGGCTGAGTTCTCCACCAGTGTCCCTGATGAGCCTTTACTGTCTCCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | CTCATGAGCGGGATGTTGTTGCTCGTTGAAGGGCTGATGGTTCTGTaGGAGTCCTCCTGGTCTGCATCTGGATCTTGCATCTCTGCACCT | + |
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Preference number: 6 (lower is better) Translates to: LMSGMLLLVEGLMVL*ESSWSASGSCISAP Trigger: AGGTGCAGAGATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAACCATCAGCCCTTCAACGAGCAACAACATCCCGCTCATGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS TCA 72 bp | CAGTATCTTGGACCATGGCCTCGTCCATGTCATCCATaGGCCCACTGTTCCGCTCACTGTCATTGTCATCAC | + |
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Preference number: 6 (lower is better) Translates to: QYLGPWPRPCHP*AHCSAHCHCHH Trigger: GTGATGACAATGACAGTGAGCGGAACAGTGGGCTCATGGATGACATGGACGAGGCCATGGTCCAAGATACTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | GGGATGTTGTTGCTCGTTGAAGGGCTGATGGTTCTGTaGGAGTCCTCCTGGTCTGCATCTGGATCTTGCATC | + |
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Preference number: 6 (lower is better) Translates to: GMLLLVEGLMVL*ESSWSASGSCI Trigger: GATGCAAGATCCAGATGCAGACCAGGAGGACTCCAACAGAACCATCAGCCCTTCAACGAGCAACAACATCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | TTCACAGACTGCACTACCCTCATGAGCGGGATGTTGTaGCTCGTTGAAGGGCTGATGGTTCTGTTGGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: FTDCTTLMSGML*LVEGLMVLLES Trigger: GGACTCCAACAGAACCATCAGCCCTTCAACGAGCAACAACATCCCGCTCATGAGGGTAGTGCAGTCTGTGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | TGCTTCACAGACTGCACTACCCTCATGAGCGGGATGTaGTTGCTCGTTGAAGGGCTGATGGTTCTGTTGGAG | + |
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Preference number: 6 (lower is better) Translates to: CFTDCTTLMSGM*LLVEGLMVLLE Trigger: CTCCAACAGAACCATCAGCCCTTCAACGAGCAACAACATCCCGCTCATGAGGGTAGTGCAGTCTGTGAAGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | TCAGCCGATGCTGTGCGGACAGTACCGAGTCCAGTGAGGGACACATaGGAGAGTCTTCTCCTTCTAACTCCACTGCAATTGTTGGGGATT | + |
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Preference number: 6 (lower is better) Translates to: SADAVRTVPSPVRDT*ESLLLLTPLQLLGI Trigger: AATCCCCAACAATTGCAGTGGAGTTAGAAGGAGAAGACTCTCCAATGTGTCCCTCACTGGACTCGGTACTGTCCGCACAGCATCGGCTGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | GCCTCGTCCATGTCATCCATGAGCCCACTGTTCCGCTCACTGTCATaGTCATCACTCCCTTCTTCCATAACAACATCAGATTCTGCACCA | + |
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Preference number: 6 (lower is better) Translates to: ASSMSSMSPLFRSLS*SSLPSSITTSDSAP Trigger: TGGTGCAGAATCTGATGTTGTTATGGAAGAAGGGAGTGATGACAATGACAGTGAGCGGAACAGTGGGCTCATGGATGACATGGACGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS GCA 72 bp | TTCTCACGGCCGATAAATGACTCAGATGGAGACTTTTaGTCAAAGCCAGGGCTCACAGGAGACAGTAAAGGC | + |
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Preference number: 6 (lower is better) Translates to: FSRPINDSDGDF*SKPGLTGDSKG Trigger: GCCTTTACTGTCTCCTGTGAGCCCTGGCTTTGAGCAAAAGTCTCCATCTGAGTCATTTATCGGCCGTGAGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | GAAACGGAAATGCTCACAGAAATATCTTTGTGTGAGTaGGATCCGGAGCCAACAGAGGAGCCCTTGGGGATG | + |
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Preference number: 6 (lower is better) Translates to: ETEMLTEISLCE*DPEPTEEPLGM Trigger: CATCCCCAAGGGCTCCTCTGTTGGCTCCGGATCCAACTCACACAAAGATATTTCTGTGAGCATTTCCGTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS TCA 72 bp | CTTCGAAGGTGGCTGAAGCTGACAGGACCACTTCAATaGGATCACCCTCCTGGATATCACTTGCGATTTTCA | + |
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Preference number: 6 (lower is better) Translates to: LRRWLKLTGPLQ*DHPPGYHLRFS Trigger: TGAAAATCGCAAGTGATATCCAGGAGGGTGATCTCATTGAAGTGGTCCTGTCAGCTTCAGCCACCTTCGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | ATGTCATCCATGAGCCCACTGTTCCGCTCACTGTCATaGTCATCACTCCCTTCTTCCATAACAACATCAGAT | + |
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Preference number: 6 (lower is better) Translates to: MSSMSPLFRSLS*SSLPSSITTSD Trigger: ATCTGATGTTGTTATGGAAGAAGGGAGTGATGACAATGACAGTGAGCGGAACAGTGGGCTCATGGATGACAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | AGGAATTTCCTTGTAGTACCGGCTCCCTGTGTCATTTaGGAAGAGTGTTATGCATTTGCTGTCCAATCTCCA | + |
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Preference number: 6 (lower is better) Translates to: RNFLVVPAPCVI*EECYAFAVQSP Trigger: TGGAGATTGGACAGCAAATGCATAACACTCTTCCAAAATGACACAGGGAGCCGGTACTACAAGGAAATTCCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 90 bp | AACAATTCCAAACTGTCCGGAACCCAGAACTTCATCAGGAAATATTaGATAGACTGTGCTGATATCCACATTTTCCTGAATCTGGCAATT | + |
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Preference number: 6 (lower is better) Translates to: NNSKLSGTQNFIRKY*IDCADIHIFLNLAI Trigger: AATTGCCAGATTCAGGAAAATGTGGATATCAGCACAGTCTATCAAATATTTCCTGATGAAGTTCTGGGTTCCGGACAGTTTGGAATTGTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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| CDS CAA 72 bp | AAACTGTCCGGAACCCAGAACTTCATCAGGAAATATTaGATAGACTGTGCTGATATCCACATTTTCCTGAAT | + |
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Preference number: 6 (lower is better) Translates to: KLSGTQNFIRKY*IDCADIHIFLN Trigger: ATTCAGGAAAATGTGGATATCAGCACAGTCTATCAAATATTTCCTGATGAAGTTCTGGGTTCCGGACAGTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000002765.9 |
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