Pregenerated sensors for PRKCZ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029053Ensembl transcript IDs: ENSMUST00000030922.15, ENSMUST00000103178.11, ENSMUST00000105624.2, ENSMUST00000123652.8, ENSMUST00000131975.8
Found 200 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCAAACGGCGTGGCTGGCTGTCTCACCCTCCGGTAGGGCCTCTGTaGACAGGAAGCGGTTCCTCCAGCACAAAGCCAGCCTCTGGGGCC | + |
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Preference number: 1 (lower is better) Translates to: SKRRGWLSHPPVGPL*TGSGSSSTKPASGA Trigger: GGCCCCAGAGGCTGGCTTTGTGCTGGAGGAACCGCTTCCTGTGCACAGAGGCCCTACCGGAGGGTGAGACAGCCAGCCACGCCGTTTGGA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | CCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTaGCTGCTTGGAGCCTCGGTGCCCGGCCTGGCATGCATATGCTGT | + |
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Preference number: 1 (lower is better) Translates to: PVGRPSSVLVASIPP*LLGASVPGLACICC Trigger: ACAGCATATGCATGCCAGGCCGGGCACCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 90 bp | CGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCTCGGTaGCCGGCCTGGCATGCATATGCTGTAGTTAAGGGTAAAGTGACA | + |
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Preference number: 1 (lower is better) Translates to: RSWWPASLPGCLEPR*PAWHAYAVVKGKVT Trigger: TGTCACTTTACCCTTAACTACAGCATATGCATGCCAGGCCGGGCACCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 90 bp | TTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTaGCTACGTCCTGACTGCTCAGAAAGCGCAGCTCCTCCTCATGTG | + |
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Preference number: 1 (lower is better) Translates to: FLLQRIPAGTWVPVP*LRPDCSESAAPPHV Trigger: CACATGAGGAGGAGCTGCGCTTTCTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | TGCACAGGAAGCGGTTCCTCCAGCACAAAGCCAGCCTCTGGGGCCTaGACACAAGAGATTGCTCTGTCTAGAAGTGCCTGTTGGACGCCC | + |
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Preference number: 1 (lower is better) Translates to: CTGSGSSSTKPASGA*TQEIALSRSACWTP Trigger: GGGCGTCCAACAGGCACTTCTAGACAGAGCAATCTCTTGTGTCCAGGCCCCAGAGGCTGGCTTTGTGCTGGAGGAACCGCTTCCTGTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | CAGAGCCACCCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTaGGCTGCCTGTTCTGTCCCAGCACCATGGATCTGGGTGTGGCTC | + |
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Preference number: 1 (lower is better) Translates to: QSHPEAWTWDMVSET*AACSVPAPWIWVWL Trigger: GAGCCACACCCAGATCCATGGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGCTCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | CTGACCTCTTCCCAGAAAGCCTTGGGCTGGCCTTTGGAACTAAGCTaGAGAGGAGGATGGCTGAGCACAGCAGTTATGGAAGCAGGCGTG | + |
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Preference number: 1 (lower is better) Translates to: LTSSQKALGWPLELS*RGGWLSTAVMEAGV Trigger: CACGCCTGCTTCCATAACTGCTGTGCTCAGCCATCCTCCTCTCCAGCTTAGTTCCAAAGGCCAGCCCAAGGCTTTCTGGGAAGAGGTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | GCTAACTTTTCCTGGAGCGGGTCAGTGCATCGAGTTCTGTTTCTGTaGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACC | + |
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Preference number: 1 (lower is better) Translates to: ANFSWSGSVHRVLFL*KMCTFPNGVAGCLT Trigger: GGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 90 bp | TATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTCAGTaGATCGAGTTCTGTTTCTGTGGAAGATGTGCACCTTTCCAAACG | + |
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Preference number: 1 (lower is better) Translates to: YSSGHYTLTFPGAGQ*IEFCFCGRCAPFQT Trigger: CGTTTGGAAAGGTGCACATCTTCCACAGAAACAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTaGAGCGGGTCAGTGCATCGAGTTCTGTTTCTGTGGAAGATGTGC | + |
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Preference number: 1 (lower is better) Translates to: HRYTLFLRALHANFS*SGSVHRVLFLWKMC Trigger: GCACATCTTCCACAGAAACAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR TCA 90 bp | AATCTCCCCCTCTGGTGGGCACAATATTATTCACACATTTGTACATaGGCAGCCGAACCAGTAACCAGCAAGTCATTTGGCAATAGGGCA | + |
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Preference number: 1 (lower is better) Translates to: NLPLWWAQYYSHICT*AAEPVTSKSFGNRA Trigger: TGCCCTATTGCCAAATGACTTGCTGGTTACTGGTTCGGCTGCTCATGTACAAATGTGTGAATAATATTGTGCCCACCAGAGGGGGAGATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCGCCCCTCTTCGGTCTTaGTGGCCAGCATCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: ESAAPPHVGAALGTSGGCAPLRS*WPASLP Trigger: AGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGC...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGGCCAGCATCCCTCCCTaGCTGCTTGGAGCCTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: ASLQALGCLSPAYVLTAQASIPP*LLGASV Trigger: CACCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGC...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | CTGTGGGCGGTGCCACCCCTGGGTGATGCCACCCATGAGCAGTGCCACCCCTGGTCTCGACAGACCAAGTaGGCAAAAGAGAAGCCGGCC | + |
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Preference number: 2 (lower is better) Translates to: LWAVPPLGDATHEQCHPWSRQTK*AKEKPA Trigger: GGCCGGCTTCTCTTTTGCCCACTTGGTCTGTCGAGA...CCAGGGGTGGCACTGCTCATGGGTGGCATCACCCAGGGGTGGCACCGCCCACAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
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| 3UTR-3UTR GCA 90 bp | CTGTGGGCGGTGCCACCCCTGGGTGATGCCACCCATGAGCAGTGCCACCCCTGGCTCTGTTTTGGCTCTTaGCTCTCTAGGATCCTGCCC | + |
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Preference number: 2 (lower is better) Translates to: LWAVPPLGDATHEQCHPWLCFGS*LSRILP Trigger: GGGCAGGATCCTAGAGAGGCAAGAGCCAAAACAGAG...CCAGGGGTGGCACTGCTCATGGGTGGCATCACCCAGGGGTGGCACCGCCCACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGTCCAAACGGCGTGGCTaGCTGTCTCACCCTCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: ASLQALGCLSPAYVLTAQSKRRG*LSHPPV Trigger: TACCGGAGGGTGAGACAGCCAGCCACGCCGTTTGGA...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGCCTTTCCAAACGGCGTaGCTGGCTGTCTCACCCTCC | + |
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Preference number: 2 (lower is better) Translates to: ASLQALGCLSPAYVLTAQPFQTA*LAVSPS Trigger: GGAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGG...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AAGTGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCCCTCGGTGCCCGGCCTaGCATGCATATGCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: KCLLDAPLRSWWPASLPGPRCPA*HAYAVV Trigger: AACTACAGCATATGCATGCCAGGCCGGGCACCGAGG...GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCTGCTTGGAGCCTCGGTaGCCGGCCTGGCATGCATAT | + |
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Preference number: 2 (lower is better) Translates to: SLDLGYGVRNLGCLFCPSCLEPR*PAWHAY Trigger: ATATGCATGCCAGGCCGGGCACCGAGGCTCCAAGCA...GCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCCCTCTTCGGTCTTGGTaGCCAGCATCCCTCCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLPLRSW*PASLPG Trigger: GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGG...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CAA 90 bp | GTTCCTCCAGCACAAAGCCAGCCTCTGGGGCCTGGACACAAGAGATaGCTCTGTCTAGAAGTGCCTGTTGGACGCCCCTCTTCGGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: VPPAQSQPLGPGHKR*LCLEVPVGRPSSVL Trigger: CAAGACCGAAGAGGGGCGTCCAACAGGCACTTCTAGACAGAGCAATCTCTTGTGTCCAGGCCCCAGAGGCTGGCTTTGTGCTGGAGGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCCCTCGGTGCCCGGCCTaGCATGCATATGCTGTAGTT | + |
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Preference number: 2 (lower is better) Translates to: SLDLGYGVRNLGCLFCPSPRCPA*HAYAVV Trigger: AACTACAGCATATGCATGCCAGGCCGGGCACCGAGG...GCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGCCTTGGGCTGGCCTTTGGAACTAAGCTGGAGAGGAGGATGGCTGAGCACATCCAAACGGCGTGGCTaGCTGTCTCACCCTCCGGTA | + |
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Preference number: 2 (lower is better) Translates to: KALGWPLELSWRGGWLSTSKRRG*LSHPPV Trigger: TACCGGAGGGTGAGACAGCCAGCCACGCCGTTTGGA...TGTGCTCAGCCATCCTCCTCTCCAGCTTAGTTCCAAAGGCCAGCCCAAGGCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | CTTCTCCATCTCCTGCCCACGACAAAGGTGGGTAAGCCATGGCCACACCCGACCAGCTGGAGAGGAGGATaGCTGAGCACAGCAGTTATG | + |
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Preference number: 2 (lower is better) Translates to: LLHLLPTTKVGKPWPHPTSWRGG*LSTAVM Trigger: CATAACTGCTGTGCTCAGCCATCCTCCTCTCCAGCT...GGTCGGGTGTGGCCATGGCTTACCCACCTTTGTCGTGGGCAGGAGATGGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTTTATCTTAGCAGCTCAACTCATGGGCAGCTGTGACTACACAGGCCTCCCATATGGGCCAGCCTaGCTTGGGTGGGTCTGGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLFILAAQLMGSCDYTGLPYGPA*LGWVWG Trigger: ACCCCAGACCCACCCAAGCCAGGCTGGCCCATATGG...GAGGCCTGTGTAGTCACAGCTGCCCATGAGTTGAGCTGCTAAGATAAAGAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR TCA 90 bp | GCACACTGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTGCATTTGGATCATCTGATCTGGGTGTGGCTCTaGCACGTTTCAGTGCCAGAC | + |
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Preference number: 2 (lower is better) Translates to: AHWEERRLAGARLHLDHLIWVWL*HVSVPD Trigger: GTCTGGCACTGAAACGTGTCAGAGCCACACCCAGAT...CAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCAGTGTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | CTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCCACAAAGCCAGCCTCTaGGGCCTGGACACAAGAGAT | + |
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Preference number: 2 (lower is better) Translates to: LDLGYGVRNLGCLFCPSTHKASL*GLDTRD Trigger: ATCTCTTGTGTCCAGGCCCCAGAGGCTGGCTTTGTG...GGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR GCA 90 bp | AGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCCCTGGAGCGGGTCAGTaGATCGAGTTCTGTTTCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLDLGYGVRNLGCLFCPSPGAGQ*IEFCFC Trigger: ACAGAAACAGAACTCGATGCACTGACCCGCTCCAGG...GCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGGCCCCTCTTCGGTCTTaGTGGCCAGCATCCCTCCCT | + |
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Preference number: 2 (lower is better) Translates to: HRYTLFLRALHANFSWSGAPLRS*WPASLP Trigger: AGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGC...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATGCCAGCATCCCTCCCTaGCTGCTTGGAGCCTCGGTG | + |
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Preference number: 2 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHASIPP*LLGASV Trigger: CACCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGC...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AGTTGGTGGGAACAGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTGGCCCGAGTTCTGTTTCTGTaGAAGATGTGCACCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: SWWEQCHQPGKGVPSALARVLFL*KMCTFP Trigger: TGGAAAGGTGCACATCTTCCACAGAAACAGAACTCG...GGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTTTGGCTCTTGCCTCTCTAGGACTTGAGTTCCTGTCTTaGCTTCCCTTAGTGATGGAC | + |
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Preference number: 2 (lower is better) Translates to: EQCHPWAGISVLALASLGLEFLS*LPLVMD Trigger: GTCCATCACTAAGGGAAGCCAAGACAGGAACTCAAG...TCCTAGAGAGGCAAGAGCCAAAACAGAGATACCTGCCCAGGGGTGGCACTGCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
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| 3UTR-3UTR GCA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTATGCTTGGAGCCTCGGTaGCCGGCCTGGCATGCATAT | + |
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Preference number: 2 (lower is better) Translates to: RHQRKLRHHRYTLFLRALCLEPR*PAWHAY Trigger: ATATGCATGCCAGGCCGGGCACCGAGGCTCCAAGCA...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTACGAGTTCTGTTTCTGTaGAAGATGTGCACCTTTCCA | + |
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Preference number: 2 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLRVLFL*KMCTFP Trigger: TGGAAAGGTGCACATCTTCCACAGAAACAGAACTCG...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR CCA 72 bp | CGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTaGCTGCTTGGAGCCTCGGTGCCCGGCCTGGCATGC | + |
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Preference number: 3 (lower is better) Translates to: RPSSVLVASIPP*LLGASVPGLAC Trigger: GCATGCCAGGCCGGGCACCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | CGTGGCTGGCTGTCTCACCCTCCGGTAGGGCCTCTGTaGACAGGAAGCGGTTCCTCCAGCACAAAGCCAGCC | + |
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Preference number: 3 (lower is better) Translates to: RGWLSHPPVGPL*TGSGSSSTKPA Trigger: GGCTGGCTTTGTGCTGGAGGAACCGCTTCCTGTGCACAGAGGCCCTACCGGAGGGTGAGACAGCCAGCCACG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR-3UTR CAA 90 bp | CTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCTCCCTCCCTGGCTGCTaGGAGCCTCGGTGCCCGGCC | + |
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Preference number: 3 (lower is better) Translates to: LDLGYGVRNLGCLFCPSTSLPGC*EPRCPA Trigger: GGCCGGGCACCGAGGCTCCAAGCAGCCAGGGAGGGA...GGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | GGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTaGTCAGAAAGCGCAGCTCCTCCTCATGTGGGGGCT | + |
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Preference number: 3 (lower is better) Translates to: GTWVPVPCLRPD*SESAAPPHVGA Trigger: AGCCCCCACATGAGGAGGAGCTGCGCTTTCTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | CAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTaGCTACGTCCTGACTGCTCAGAAAGCGCAGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: QRIPAGTWVPVP*LRPDCSESAAP Trigger: AGGAGCTGCGCTTTCTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | GCCATATGGGCCAGCCTGGCTTGGGTGGGTCTGGGGTaGTCAGTCACTGCGGTGTGCCTTCTCCATCTCCTG | + |
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Preference number: 3 (lower is better) Translates to: AIWASLAWVGLG*SVTAVCLLHLL Trigger: CAGGAGATGGAGAAGGCACACCGCAGTGACTGAGCACCCCAGACCCACCCAAGCCAGGCTGGCCCATATGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR TCA 72 bp | TGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTaGCTGCTCAGAAAGCGCAGCTCCTCCTCATGTGGG | + |
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Preference number: 3 (lower is better) Translates to: CRHLGACPLPTS*LLRKRSSSSCG Trigger: CCCACATGAGGAGGAGCTGCGCTTTCTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | GCTTGGGTGGGTCTGGGGTGCTCAGTCACTGCGGTGTaGCTTCTCCATCTCCTGCCCACGACAAAGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: AWVGLGCSVTAV*LLHLLPTTKVG Trigger: ACCCACCTTTGTCGTGGGCAGGAGATGGAGAAGGCACACCGCAGTGACTGAGCACCCCAGACCCACCCAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR GCA 72 bp | CAGCCTGGCTTGGGTGGGTCTGGGGTGCTCAGTCACTaGGGTGTGCCTTCTCCATCTCCTGCCCACGACAAA | + |
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Preference number: 3 (lower is better) Translates to: QPGLGGSGVLSH*GVPSPSPAHDK Trigger: TTTGTCGTGGGCAGGAGATGGAGAAGGCACACCGCAGTGACTGAGCACCCCAGACCCACCCAAGCCAGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR-3UTR CAA 90 bp | GCCACCCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCATCCCTGCAGGCACTaGGGTGCCTGTCCCCTGCCT | + |
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Preference number: 3 (lower is better) Translates to: ATQKPGLGIWCQKPGLPVHPCRH*GACPLP Trigger: AGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATG...AACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR CCA 72 bp | CGGTGTGCCTTCTCCATCTCCTGCCCACGACAAAGGTaGGTAAGCCATGGCCACACCCGACCTGCTAAGGGT | + |
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Preference number: 3 (lower is better) Translates to: RCAFSISCPRQR*VSHGHTRPAKG Trigger: ACCCTTAGCAGGTCGGGTGTGGCCATGGCTTACCCACCTTTGTCGTGGGCAGGAGATGGAGAAGGCACACCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| 3UTR CCA 72 bp | GTAGCATGTTTGCCATATGGGCCAGCCTGGCTTGGGTaGGTCTGGGGTGCTCAGTCACTGCGGTGTGCCTTC | + |
|
Preference number: 3 (lower is better) Translates to: VACLPYGPAWLG*VWGAQSLRCAF Trigger: GAAGGCACACCGCAGTGACTGAGCACCCCAGACCCACCCAAGCCAGGCTGGCCCATATGGCAAACATGCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTaGCTGTCTCACCCTCCGGTAGGGCCTCTGTGCACA | + |
|
Preference number: 3 (lower is better) Translates to: SVEDVHLSKRRG*LSHPPVGPLCT Trigger: TGTGCACAGAGGCCCTACCGGAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | AACTCATGGGCAGCTGTGACTACACAGGCCTCAGACTaGGGCTCCAGCCACTTGGACCCCCAGACTAGGCTA | + |
|
Preference number: 3 (lower is better) Translates to: NSWAAVTTQASD*GSSHLDPQTRL Trigger: TAGCCTAGTCTGGGGGTCCAAGTGGCTGGAGCCCCAGTCTGAGGCCTGTGTAGTCACAGCTGCCCATGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR-3UTR CAA 90 bp | CCCCTGGGTGATGCCACCCATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTAGGATCCTGCCCTACTaGAGTTCCTGTCTTGGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: PLGDATHEQCHPWAGISVRILPY*SSCLGF Trigger: GAAGCCAAGACAGGAACTCAAGTAGGGCAGGATCCT...AACAGAGATACCTGCCCAGGGGTGGCACTGCTCATGGGTGGCATCACCCAGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTCCCTCCCTGGCTGCTaGGAGCCTCGGTGCCCGGCC | + |
|
Preference number: 3 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHSLPGC*EPRCPA Trigger: GGCCGGGCACCGAGGCTCCAAGCAGCCAGGGAGGGA...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR TCA 72 bp | CATGGCCACACCCGACCTGCTAAGGGTAACGTTAGCTaGCCTCTTCCCAGAAAGCCTTGGGCTGGCCTTTGG | + |
|
Preference number: 3 (lower is better) Translates to: HGHTRPAKGNVS*PLPRKPWAGLW Trigger: CCAAAGGCCAGCCCAAGGCTTTCTGGGAAGAGGTCAGCTAACGTTACCCTTAGCAGGTCGGGTGTGGCCATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTaGCTGGCTGTCTCACCCTCCGGTAGGGCCTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: CFCGRCAPFQTA*LAVSPSGRASV Trigger: CACAGAGGCCCTACCGGAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR GCA 72 bp | AGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTaGCTGTTCTGTCCCAGCACCATGGATCTGGGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: SLDLGYGVRNLG*LFCPSTMDLGV Trigger: CACACCCAGATCCATGGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TCCTGGAGCGGGTCAGTGCATCGAGTTCTGTTTCTGTaGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: SWSGSVHRVLFL*KMCTFPNGVAG Trigger: GCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACAGAACTCGATGCACTGACCCGCTCCAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | CCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTaGGCTGCCTGTTCTGTCCCAGCACCATGGATCTGG | + |
|
Preference number: 3 (lower is better) Translates to: PEAWTWDMVSET*AACSVPAPWIW Trigger: CCAGATCCATGGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR-3UTR CAA 90 bp | GCACACTGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTGCATTTGGATCATCTGTCTTCCCAGAAAGCCTaGGGCTGGCCTTTGGAACTA | + |
|
Preference number: 3 (lower is better) Translates to: AHWEERRLAGARLHLDHLSSQKA*GWPLEL Trigger: TAGTTCCAAAGGCCAGCCCAAGGCTTTCTGGGAAGA...CAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCAGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR GCA 72 bp | TTTCCCCATCAGAGTCCAAACAGTTGGTGGGAACAGTaGCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FPHQSPNSWWEQ*HQPGKGVPSAL Trigger: CAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACTGTTTGGACTCTGATGGGGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TTGGGCTGGCCTTTGGAACTAAGCTGGAGAGGAGGATaGCTGAGCACAGCAGTTATGGAAGCAGGCGTGCTT | + |
|
Preference number: 3 (lower is better) Translates to: LGWPLELSWRGG*LSTAVMEAGVL Trigger: AAGCACGCCTGCTTCCATAACTGCTGTGCTCAGCCATCCTCCTCTCCAGCTTAGTTCCAAAGGCCAGCCCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TGTGGCTCTGACACGTTTCAGTGCCAGACATGGCGATaGCCTGAGAAACCTGAGTGTTTTGGGGTGAGGGCT | + |
|
Preference number: 3 (lower is better) Translates to: CGSDTFQCQTWR*PEKPECFGVRA Trigger: AGCCCTCACCCCAAAACACTCAGGTTTCTCAGGCCATCGCCATGTCTGGCACTGAAACGTGTCAGAGCCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR GCA 72 bp | CACACTGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTaGATTTGGATCATCTGCGGGCTCTTTATCTTAGCA | + |
|
Preference number: 3 (lower is better) Translates to: HTGRKGGSQEPV*IWIICGLFILA Trigger: TGCTAAGATAAAGAGCCCGCAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | AGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTaGCCTACCATGGCTAGCTGTGCTAGGTATGAAAAT | + |
|
Preference number: 3 (lower is better) Translates to: SATNLVRVSLRP*PTMASCARYEN Trigger: ATTTTCATACCTAGCACAGCTAGCCATGGTAGGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | TCCCAGAAAGCCTTGGGCTGGCCTTTGGAACTAAGCTaGAGAGGAGGATGGCTGAGCACAGCAGTTATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SQKALGWPLELS*RGGWLSTAVME Trigger: TTCCATAACTGCTGTGCTCAGCCATCCTCCTCTCCAGCTTAGTTCCAAAGGCCAGCCCAAGGCTTTCTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CCA 72 bp | GGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTGCATTTaGATCATCTGCGGGCTCTTTATCTTAGCAGCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: GRKGGSQEPVCI*IICGLFILAAQ Trigger: TTGAGCTGCTAAGATAAAGAGCCCGCAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR GCA 72 bp | GGGCATTACACGCTAACTTTTCCTGGAGCGGGTCAGTaGATCGAGTTCTGTTTCTGTGGAAGATGTGCACCT | + |
|
Preference number: 3 (lower is better) Translates to: GHYTLTFPGAGQ*IEFCFCGRCAP Trigger: AGGTGCACATCTTCCACAGAAACAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR TCA 72 bp | TGGTTACCGAGTTACAATCATGAAGTCACCAGTGTCTaGGAACACACGCTTTCTTGCCCAGAGCCATTTGCA | + |
|
Preference number: 3 (lower is better) Translates to: WLPSYNHEVTSV*EHTLSCPEPFA Trigger: TGCAAATGGCTCTGGGCAAGAAAGCGTGTGTTCTCAGACACTGGTGACTTCATGATTGTAACTCGGTAACCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR TCA 72 bp | CTCTGGTGGGCACAATATTATTCACACATTTGTACATaGGCAGCCGAACCAGTAACCAGCAAGTCATTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LWWAQYYSHICT*AAEPVTSKSFG Trigger: GCCAAATGACTTGCTGGTTACTGGTTCGGCTGCTCATGTACAAATGTGTGAATAATATTGTGCCCACCAGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCCTCCAGGACAAGGCATaGCCGGCTGCTCTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: ESAAPPHVGAALGTSGGCLQDKA*PAALGC Trigger: GCATCCCAGAGCAGCCGGGCATGCCTTGTCCTGGAG...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR GCA 90 bp | GGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCTCATCTGGGGTCAGCTaGACAGGCTCGCTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSVLVASIPPWLLGASSGVS*TGSLVN Trigger: GTTCACCAGCGAGCCTGTGCAGCTGACCCCAGATGA...GGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | GGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCGTGAGTGGGTGCTGCTaGTGCAGGCCACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSVLVASIPPWLLGAVSGCC*CRPHMS Trigger: AGACATGTGTGGCCTGCACCAGCAGCACCCACTCAC...GGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCGACGTCCTCATCATCTaGGGTCAGCTGCACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: ESAAPPHVGAALGTSGGCDVLII*GQLHRL Trigger: GAGCCTGTGCAGCTGACCCCAGATGATGAGGACGTC...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCGCACAGGCTCGCTGGTaGACTGCGTGTCAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ESAAPPHVGAALGTSGGCAQARW*TACQSC Trigger: ACAACTTTGACACGCAGTTCACCAGCGAGCCTGTGC...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | GGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCGGCTCGCTGGTGAACTaGGTGTCAAAGTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GRPSSVLVASIPPWLLGAGSLVN*VSKLSR Trigger: CCTGGACAACTTTGACACGCAGTTCACCAGCGAGCC...GGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | TGTCTAGAAGTGCCTGTTGGACGCCCCTCTTCGGTCTaGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: CLEVPVGRPSSV*VASIPPWLLGA Trigger: GGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTTCTAGACA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGGCACAGGCTCGCTGGTaGACTGCGTGTCAAAGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ASLQALGCLSPAYVLTAQAQARW*TACQSC Trigger: ACAACTTTGACACGCAGTTCACCAGCGAGCCTGTGC...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGGGTCGATCCTCTTTATaGCGTCCTCATCATCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLQALGCLSPAYVLTAQGRSSL*RPHHLG Trigger: CCCCAGATGATGAGGACGTCATAAAGAGGATCGACC...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTTTGGCTCTTGCCTCTCTACGCTCCGGTCCATCTTaGGGTCCGTCCTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: HEQCHPWAGISVLALASLRSGPS*GPSCWA Trigger: TGCCCAGCAGGACGGACCCCAAGATGGACCGGAGCG...TAGAGAGGCAAGAGCCAAAACAGAGATACCTGCCCAGGGGTGGCACTGCTCATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR CCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCAGCAGACAGCAGAAGTaGGTTGATGTACTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ESAAPPHVGAALGTSGGCSRQQK*VDVLKA Trigger: GGCTTTGAGTACATCAACCCACTTCTGCTGTCTGCT...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGGGGTTCCACAAAAAGTaGTTGTTGTATCACCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ASLQALGCLSPAYVLTAQGFHKK*LLYHRG Trigger: GCCCCGGTGATACAACAAGCACTTTTTGTGGAACCC...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGTTGGTGGGAACAGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTGGCCGGCTCGCTGGTGAACTaGGTGTCAAAGTTGTCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SWWEQCHQPGKGVPSALAGSLVN*VSKLSR Trigger: CCTGGACAACTTTGACACGCAGTTCACCAGCGAGCC...GGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | GAAAGCGCAGCTCCTCCTCATGTGGGGGCTGCGCTGGGGACATCAGGCGGGTGCCTGCTCTGGGATGCTTaGGAAAACATGAATGATGAG | + |
|
Preference number: 4 (lower is better) Translates to: ESAAPPHVGAALGTSGGCLLWDA*ENMNDE Trigger: CTCATCATTCATGTTTTCCCAAGCATCCCAGAGCAG...GCACCCGCCTGATGTCCCCAGCGCAGCCCCCACATGAGGAGGAGCTGCGCTTTC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | AGTTGGTGGGAACAGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTGGCCCCAGGAAGGGGTTGCTaGACGCCTGCTCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: SWWEQCHQPGKGVPSALAPGRGC*TPAQTH Trigger: ATGTGTTTGAGCAGGCGTCCAGCAACCCCTTCCTGG...GGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | CCCCTGGGTGATGCCACCCATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTCCTCACAGAGGTCCTTaGATGTTGTCATGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: PLGDATHEQCHPWAGISVPHRGP*MLSWHP Trigger: TGGATGCCATGACAACATTCAAGGACCTCTGTGAGG...AACAGAGATACCTGCCCAGGGGTGGCACTGCTCATGGGTGGCATCACCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR GCA 90 bp | CATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTTTGGCTCTTGCCTCTCTATTGAGGGTGAGTGGGTaGTGCTGGTGCAGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: HEQCHPWAGISVLALASLLRVSG*CWCRPH Trigger: GTGTGGCCTGCACCAGCAGCACCCACTCACCCTCAA...TAGAGAGGCAAGAGCCAAAACAGAGATACCTGCCCAGGGGTGGCACTGCTCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTCCATCTCCTGCCCACGACAAAGGTGGGTAAGCCATGGCCACACCCGACCGCAGGTCCCAGTCTATaGTGCGGAAGAAAGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: LLHLLPTTKVGKPWPHPTAGPSL*CGRKHE Trigger: CTCATGCTTTCTTCCGCAGCATAGACTGGGACCTGC...GGTCGGGTGTGGCCATGGCTTACCCACCTTTGTCGTGGGCAGGAGATGGAGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AAGTGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCACGGGGAATCCGGATTaGCTTTTCCAGGATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KCLLDAPLRSWWPASLPGTGNPD*LFQDNL Trigger: CAAGTTATCCTGGAAAAGCCAATCCGGATTCCCCGT...GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | TGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCCCTTCAAATTCGGACTaGTCGATCCTCTTTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: CLLDAPLRSWWPASLPGCPSNSD*SILFMT Trigger: CGTCATAAAGAGGATCGACCAGTCCGAATTTGAAGG...GCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | GCACAAAGCCAGCCTCTGGGGCCTGGACACAAGAGATaGCTCTGTCTAGAAGTGCCTGTTGGACGCCCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQSQPLGPGHKR*LCLEVPVGRPS Trigger: AGAGGGGCGTCCAACAGGCACTTCTAGACAGAGCAATCTCTTGTGTCCAGGCCCCAGAGGCTGGCTTTGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | GTGCCACCCCTGGGCAGGTATCTCTGTTTTGGCTCTTGCCTCTCTAGGATCCTGCTCCAGCTCCATCTGTaGGGACACAGTACAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: VPPLGRYLCFGSCLSRILLQLHL*GHSTRV Trigger: GACCCTTGTACTGTGTCCTCACAGATGGAGCTGGAG...CAGGATCCTAGAGAGGCAAGAGCCAAAACAGAGATACCTGCCCAGGGGTGGCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR GCA 90 bp | GCCACCCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTAAGGGAGGCAGGGTCTaGTTCTTTTCCAGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: ATQKPGLGIWCQKPGLPVKGGRV*FFSSRS Trigger: GGACCTGCTGGAAAAGAAGCAGACCCTGCCTCCCTT...AACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTTTGGCTCTTGCCTCTCTAGTGAGTGGGTGCTGCTaGTGCAGGCCACACATGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HEQCHPWAGISVLALASLVSGCC*CRPHMS Trigger: AGACATGTGTGGCCTGCACCAGCAGCACCCACTCAC...TAGAGAGGCAAGAGCCAAAACAGAGATACCTGCCCAGGGGTGGCACTGCTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCGCTTCCTCCATCTTCTaGCTCCACGGCGGTAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLASSIF*LHGGRW Trigger: CCATCTACCGCCGTGGAGCCAGAAGATGGAGGAAGC...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | GCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCTCGGTCTTTACCACCTTCATaGCGTAAATCTGGTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: APLRSWWPASLPGCLEPRSLPPS*RKSGRF Trigger: AAAACGACCAGATTTACGCCATGAAGGTGGTAAAGA...CCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AGGAGGATGGCTGAGCACAGCAGTTATGGAAGCAGGCGTGCTTCCTCAGGAAGACTCTGCCTCTGCATGTaGAACATGAGGTCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: RRMAEHSSYGSRRASSGRLCLCM*NMRSPP Trigger: TGGCGGGGACCTCATGTTCCACATGCAGAGGCAGAG...TCTTCCTGAGGAAGCACGCCTGCTTCCATAACTGCTGTGCTCAGCCATCCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCCTCCAGCTCCATCTGTaGGGACACAGTACAAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: CFCGRCAPFQTAWLAVSPLQLHL*GHSTRV Trigger: GACCCTTGTACTGTGTCCTCACAGATGGAGCTGGAG...GGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR TCA 90 bp | GCCACCCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTTTAGGTCCCGGTAGATaGTCCCCCTCTCATGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: ATQKPGLGIWCQKPGLPVLGPGR*SPSHAR Trigger: TCTTGCATGAGAGGGGGATCATCTACCGGGACCTAA...AACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCAAGGGAGGCAGGGTCTaGTTCTTTTCCAGCAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLKGGRV*FFSSRS Trigger: GGACCTGCTGGAAAAGAAGCAGACCCTGCCTCCCTT...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTCATGCCCGGCTGCTCTaGGATGCTTGGGAAAACATG | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPHARLL*DAWENM Trigger: CATGTTTTCCCAAGCATCCCAGAGCAGCCGGGCATG...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| 3UTR CAA 72 bp | GCACACTGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTaGCATTTGGATCATCTGCGGGCTCTTTATCTTAGC | + |
|
Preference number: 4 (lower is better) Translates to: AHWEERRLAGAR*HLDHLRALYLS Trigger: GCTAAGATAAAGAGCCCGCAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCAGTGTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | ACAATCCAGGGTTCCAGTGCTGCTTGGGCAAAGCAGTaGTTGCTGTCCCTAGGCAGCACACTGGGAGGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TIQGSSAAWAKQ*LLSLGSTLGGK Trigger: CTTTCCTCCCAGTGTGCTGCCTAGGGACAGCAACAACTGCTTTGCCCAAGCAGCACTGGAACCCTGGATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | AGTTGGTGGGAACAGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTGGCCTCCATCAGTTTCTTCTaGAGGAAGGTCTACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: SWWEQCHQPGKGVPSALASISFF*RKVYTI Trigger: GATGGTGTAGACCTTCCTTCAGAAGAAACTGATGGA...GGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTTAGGTCCCGGTAGATaGTCCCCCTCTCATGCAAGA | + |
|
Preference number: 4 (lower is better) Translates to: CFCGRCAPFQTAWLAVSPLGPGR*SPSHAR Trigger: TCTTGCATGAGAGGGGGATCATCTACCGGGACCTAA...GGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | CTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCGGTCCCAGTCTATGCTaGGGAAGAAAGCATGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: LDLGYGVRNLGCLFCPSTGPSLC*GRKHET Trigger: AGTCTCATGCTTTCTTCCGCAGCATAGACTGGGACC...GGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCGCAGGTCCCAGTCTATaGTGCGGAAGAAAGCATGAG | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLAGPSL*CGRKHE Trigger: CTCATGCTTTCTTCCGCAGCATAGACTGGGACCTGC...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | ATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGCGCTCCGGTCCATCTTaGGGTCCGTCCTGCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: IIGTLYSSGHYTLTFPGARSGPS*GPSCWA Trigger: TGCCCAGCAGGACGGACCCCAAGATGGACCGGAGCG...CGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGGGAAGAGGTGGCCGTTaGCTCGGTACAGCTTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGGRGGR*LGTASS Trigger: GGAGGAAGCTGTACCGAGCCAACGGCCACCTCTTCC...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| 3UTR CAA 72 bp | TCAATAGGAGACACAGAGCCACCCAGAAGCCTGGACTaGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: SIGDTEPPRSLD*GYGVRNLGCLF Trigger: GAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGCTCTGTGTCTCCTATTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | TGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTGCATTaGGATCATCTGCGGGCTCTTTATCTTAGCAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WEERRLAGARLH*DHLRALYLSSS Trigger: TGAGCTGCTAAGATAAAGAGCCCGCAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTCCTCACAGAGGTCCTTaGATGTTGTCATGGCATCCA | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPPHRGP*MLSWHP Trigger: TGGATGCCATGACAACATTCAAGGACCTCTGTGAGG...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR GCA 90 bp | ACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCATGGGGGTTCCACAAAAAGTaGTTGTTGTATCACCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: TWDMVSETWAACSVPAPWGFHKK*LLYHRG Trigger: GCCCCGGTGATACAACAAGCACTTTTTGTGGAACCC...CCATGGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCGGTCCCAGTCTATGCTaGGGAAGAAAGCATGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: CFCGRCAPFQTAWLAVSPGPSLC*GRKHET Trigger: AGTCTCATGCTTTCTTCCGCAGCATAGACTGGGACC...GGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR GCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTCATCTGGGGTCAGCTaGACAGGCTCGCTGGTGAAC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGSSGVS*TGSLVN Trigger: GTTCACCAGCGAGCCTGTGCAGCTGACCCCAGATGA...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTTGGCTTGGAAGAGGTaGCCGTTGGCTCGGTACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGLAWKR*PLARYS Trigger: GCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAA...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
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| CDS-3UTR CCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTTCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCC | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPSTGGS*EGMTES Trigger: GGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGA...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTCAGTGCATCGAGTTCTGAACCGGCTCGTTGTCTaGAAGCAGGAGTGTAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LRALHANFSWSGSVHRVLNRLVV*KQECKP Trigger: TGGCTTACACTCCTGCTTCCAGACAACGAGCCGGTT...CAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR CCA 90 bp | GCCACCCAGAAGCCTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTAGCAGACAGCAGAAGTaGGTTGATGTACTCAAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: ATQKPGLGIWCQKPGLPVSRQQK*VDVLKA Trigger: GGCTTTGAGTACATCAACCCACTTCTGCTGTCTGCT...AACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAGGCTTCTGGGTGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | GCACACTGGGAGGAAAGGAGGCTCGCAGGAGCCCGTTTGCATTTGGATCATCTGTCCATCAGTTTCTTCTaGAGGAAGGTCTACACCATC | + |
|
Preference number: 4 (lower is better) Translates to: AHWEERRLAGARLHLDHLSISFF*RKVYTI Trigger: GATGGTGTAGACCTTCCTTCAGAAGAAACTGATGGA...CAGATGATCCAAATGCAAACGGGCTCCTGCGAGCCTCCTTTCCTCCCAGTGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| CDS-3UTR TCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTCTGCGGAAGAAAGCATaGGACTTGATGTCGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPLRKKA*DLMSEN Trigger: GTTTTCCGACATCAAGTCTCATGCTTTCTTCCGCAG...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR TCA 90 bp | ACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCATGGCTGCGGAAGAAAGCATaGGACTTGATGTCGGAAAAC | + |
|
Preference number: 4 (lower is better) Translates to: TWDMVSETWAACSVPAPWLRKKA*DLMSEN Trigger: GTTTTCCGACATCAAGTCTCATGCTTTCTTCCGCAG...CCATGGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
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| CDS-3UTR GCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTTGAGGGTGAGTGGGTaGTGCTGGTGCAGGCCACAC | + |
|
Preference number: 4 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHLRVSG*CWCRPH Trigger: GTGTGGCCTGCACCAGCAGCACCCACTCACCCTCAA...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
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| CDS-3UTR CCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATATCCTTTCGCTGCACTaGCCGCAGTACGCTCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHILSLH*PQYAPL Trigger: CAGGGGAGCGTACTGCGGCCAGTGCAGCGAAAGGAT...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
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| CDS-3UTR CCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAAGCGGGACGAGGACGTaGCAGCGTTTATGGACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLSGTRT*QRLWTS Trigger: GCTGGTCCATAAACGCTGCCACGTCCTCGTCCCGCT...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGTTCTTGTCATCTACTaGAGGCTCTTGGGAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPVLVIY*RLLGRH Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAAC...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR CCA 90 bp | AAAGCCTTGGGCTGGCCTTTGGAACTAAGCTGGAGAGGAGGATGGCTGAGCACAACGGGGAATCCGGATTaGCTTTTCCAGGATAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: KALGWPLELSWRGGWLSTTGNPD*LFQDNL Trigger: CAAGTTATCCTGGAAAAGCCAATCCGGATTCCCCGT...TGTGCTCAGCCATCCTCCTCTCCAGCTTAGTTCCAAAGGCCAGCCCAAGGCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCATGCTTGGGAAAACATaGATGATGAGCACTTCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLMLGKT*MMSTSS Trigger: GGACGAAGTGCTCATCATTCATGTTTTCCCAAGCAT...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR TCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGGCTCTTGGGAAGGCATaGCAGAATCCATATGCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGALGKA*QNPYAS Trigger: GGAGGCATATGGATTCTGTCATGCCTTCCCAAGAGC...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR TCA 90 bp | AGTTGGTGGGAACAGTGCCACCAACCTGGTAAGGGTGTCCCTTCGGCCTTGGCCCCTCAGAATCATCTTTaGTATTATCATGTTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: SWWEQCHQPGKGVPSALAPQNHL*YYHVSE Trigger: CTCGGAAACATGATAATATCAAAGATGATTCTGAGG...GGCCAAGGCCGAAGGGACACCCTTACCAGGTTGGTGGCACTGTTCCCACCAACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTACAGCAGAAGTGGGTTaGTGTACTCAAAGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPTAEVG*CTQSLQ Trigger: TTGAAGGCTTTGAGTACATCAACCCACTTCTGCTGT...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | AGGAGGATGGCTGAGCACAGCAGTTATGGAAGCAGGCGTGCTTCCTCAGGAAGAACAGCAGAAGTGGGTTaGTGTACTCAAAGCCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: RRMAEHSSYGSRRASSGRTAEVG*CTQSLQ Trigger: TTGAAGGCTTTGAGTACATCAACCCACTTCTGCTGT...TCTTCCTGAGGAAGCACGCCTGCTTCCATAACTGCTGTGCTCAGCCATCCTCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACCCATATCCTTTCGCTaGACTGGCCGCAGTACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RHQRKLRHHRYTLFLRALPISFR*TGRSTL Trigger: GAGCGTACTGCGGCCAGTGCAGCGAAAGGATATGGG...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR GCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCTCTGGAAGTTTTCTCTaGCTCTGCATGTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLSGSFL*LCMWNM Trigger: CATGTTCCACATGCAGAGGCAGAGAAAACTTCCAGA...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCCTCCACGGCGGTAGATaGACTTGTCTTCTCCAGGAC | + |
|
Preference number: 4 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSLHGGR*TCLLQD Trigger: GTCCTGGAGAAGACAAGTCCATCTACCGCCGTGGAG...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | ATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGCTCTGCCTCTGCATGTaGAACATGAGGTCCCCGCCA | + |
|
Preference number: 4 (lower is better) Translates to: IIGTLYSSGHYTLTFPGALCLCM*NMRSPP Trigger: TGGCGGGGACCTCATGTTCCACATGCAGAGGCAGAG...CGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAGACGTCCTCATCATCTaGGGTCAGCTGCACAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLDVLII*GQLHRL Trigger: GAGCCTGTGCAGCTGACCCCAGATGATGAGGACGTC...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTAAATCCATATGCCTCCTaGAGGTCAGCGGGACGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RHQRKLRHHRYTLFLRALNPYAS*RSAGRG Trigger: TCCTCGTCCCGCTGACCTGCAGGAGGCATATGGATT...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR GCA 90 bp | ATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGCATAAGGACACCCAGTaGCCACCAGTCCACGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: IIGTLYSSGHYTLTFPGAHKDTQ*PPVHAE Trigger: TTCAGCGTGGACTGGTGGGCACTGGGTGTCCTTATG...CGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATCATAAGGACACCCAGTaGCCACCAGTCCACGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHHKDTQ*PPVHAE Trigger: TTCAGCGTGGACTGGTGGGCACTGGGTGTCCTTATG...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTACCAGGAAGGGGTTGCTaGACGCCTGCTCAAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLPGRGC*TPAQTH Trigger: ATGTGTTTGAGCAGGCGTCCAGCAACCCCTTCCTGG...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | AAAGTCTTTAATGGATGTGCAAGAGTAAGAACGACCTaGGCCGTGGAGGGCGAAGATATCGCCCACAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: KVFNGCARVRTT*AVEGEDIAHRR Trigger: CCTTCTGTGGGCGATATCTTCGCCCTCCACGGCCAAGGTCGTTCTTACTCTTGCACATCCATTAAAGACTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAGGTCGATCCTCTTTATaGCGTCCTCATCATCTGGGG | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLGRSSL*RPHHLG Trigger: CCCCAGATGATGAGGACGTCATAAAGAGGATCGACC...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGAGTTTTCTCTGCCTCTaGATGTGGAACATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGSFLCL*MWNMRS Trigger: GGACCTCATGTTCCACATGCAGAGGCAGAGAAAACT...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHLKRLA*KRWPLA Trigger: AGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAA...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CCA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCTCTTTACCACCTTCATaGCGTAAATCTGGTCGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLSLPPS*RKSGRF Trigger: AAAACGACCAGATTTACGCCATGAAGGTGGTAAAGA...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGATATCCTCGTCGTCGTaGACAAGCTCCTTCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGISSSS*TSSFFT Trigger: GGTAAAGAAGGAGCTTGTCCACGACGACGAGGATAT...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | TCTCCCCCTCTGGTGGGCACAATATTATTCACACATTaGTACATGAGCAGCCGAACCAGTAACCAGCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: SPPLVGTILFTH*YMSSRTSNQQV Trigger: GACTTGCTGGTTACTGGTTCGGCTGCTCATGTACAAATGTGTGAATAATATTGTGCCCACCAGAGGGGGAGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| 3UTR CAA 72 bp | AAGGAATGCCGGCCGGCGATGGGCTCCACTGATCAATaGTACAAAACCACATGGTTACCGAGTTACAATCAT | + |
|
Preference number: 4 (lower is better) Translates to: KECRPAMGSTDQ*YKTTWLPSYNH Trigger: ATGATTGTAACTCGGTAACCATGTGGTTTTGTACAATTGATCAGTGGAGCCCATCGCCGGCCGGCATTCCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR TCA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTCCTCAGAATCATCTTTaGTATTATCATGTTTCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: CNNSCCSASLQALGCLSPPQNHL*YYHVSE Trigger: CTCGGAAACATGATAATATCAAAGATGATTCTGAGG...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | CATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGATGATCCCCCTCTCATaGAAGAAGTTGAGAGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HRYTLFLRALHANFSWSGMIPLS*KKLRAI Trigger: TATCGCTCTCAACTTCTTGCATGAGAGGGGGATCAT...CCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCGTTCTTGTCATCTACTaGAGGCTCTTGGGAAGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSVLVIY*RLLGRH Trigger: ATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAAC...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AAAGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATACATGTTTCTCTGTCTaGACCCAGTCGATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: KGIRGSFDIIGTLYSSGHTCFSV*TQSISS Trigger: CGAGGATATCGACTGGGTGCAGACAGAGAAACATGT...ATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTAACATGTTTCTCTGTCTaGACCCAGTCGATATCCTCG | + |
|
Preference number: 4 (lower is better) Translates to: RHQRKLRHHRYTLFLRALTCFSV*TQSISS Trigger: CGAGGATATCGACTGGGTGCAGACAGAGAAACATGT...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAAGTTTTCTCTGCCTCTaGATGTGGAACATGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLSFLCL*MWNMRS Trigger: GGACCTCATGTTCCACATGCAGAGGCAGAGAAAACT...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCATGATCCCCCTCTCATaGAAGAAGTTGAGAGCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSMIPLS*KKLRAI Trigger: TATCGCTCTCAACTTCTTGCATGAGAGGGGGATCAT...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTAATATCCTCGTCGTCGTaGACAAGCTCCTTCTTTACC | + |
|
Preference number: 4 (lower is better) Translates to: RHQRKLRHHRYTLFLRALISSSS*TSSFFT Trigger: GGTAAAGAAGGAGCTTGTCCACGACGACGAGGATAT...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR GCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTATCTGGAAGTTTTCTCTaGCTCTGCATGTGGAACATG | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLSGSFL*LCMWNM Trigger: CATGTTCCACATGCAGAGGCAGAGAAAACTTCCAGA...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CCA 90 bp | AGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTACCTTCAAATTCGGACTaGTCGATCCTCTTTATGACG | + |
|
Preference number: 4 (lower is better) Translates to: RGSFDIIGTLYSSGHYTLPSNSD*SILFMT Trigger: CGTCATAAAGAGGATCGACCAGTCCGAATTTGAAGG...TAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCTCGGTCACTGTCCACCCACTaGAGGGTGAGTGGGTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: APLRSWWPASLPGCLEPRSLSTH*RVSGCC Trigger: GCAGCACCCACTCACCCTCAAGTGGGTGGACAGTGA...CCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | GCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGCCTACGTCCTGACTGCTCAGTGGAAGAGGTGGCCGTaGGCTCGGTACAGCTTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: ASLQALGCLSPAYVLTAQWKRWP*ARYSFL Trigger: GAGGAAGCTGTACCGAGCCAACGGCCACCTCTTCCA...CTGAGCAGTCAGGACGTAGGCAGGGGACAGGCACCCAAGTGCCTGCAGGGATGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | AAGTGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCCCCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCG | + |
|
Preference number: 5 (lower is better) Translates to: KCLLDAPLRSWWPASLPGPLLKR*AWKRWP Trigger: CGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGG...GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCCCGCTCCGGTCCATCTaGGGGTCCGTCCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CFCGRCAPFQTAWLAVSPPLRSI*GSVLLG Trigger: GCCCAGCAGGACGGACCCCAAGATGGACCGGAGCGG...GGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCAAGACGTGTGAGGCCTaGACAGACAGGAAACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CLLDAPLRSWWPASLPGCKTCEA*TDRKRG Trigger: TCCCCGTTTCCTGTCTGTCAAGGCCTCACACGTCTT...GCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS GCA 90 bp | CAAGGGTCACCTTCACTGTCCACCCACTTGAGGGTGAGTGGGTGCTaGTGGTGCAGGCCACACATGTCTCGCACTTCCTCACAGAGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: QGSPSLSTHLRVSGC*WCRPHMSRTSSQRS Trigger: GGACCTCTGTGAGGAAGTGCGAGACATGTGTGGCCTGCACCAGCAGCACCCACTCACCCTCAAGTGGGTGGACAGTGAAGGTGACCCTTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000105624.2 |
||
| CDS CCA 90 bp | TCGCTGCACTGGCCGCAGTACGCTCCCCTGTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCTCGGTACAGCTTCCTCCATCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLHWPQYAPLLKRLA*KRWPLARYSFLHLL Trigger: CAGAAGATGGAGGAAGCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCAGTGCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
||
| CDS-3UTR CAA 90 bp | CCTGCCCTACTTGAGTTCCTGTCTTGGCTTCCCTTAGTGATGGACTGTGATCAGCCGCTCCGGTCCATCTaGGGGTCCGTCCTGCTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: PALLEFLSWLPLVMDCDQPLRSI*GSVLLG Trigger: GCCCAGCAGGACGGACCCCAAGATGGACCGGAGCGG...CTGATCACAGTCCATCACTAAGGGAAGCCAAGACAGGAACTCAAGTAGGGCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR CAA 90 bp | CTGGACTTGGGATATGGTGTCAGAAACCTGGGCTGCCTGTTCTGTCCCAGCACCGATGAGGTCGAAGTCTaGCAGCCCCAGCCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: LDLGYGVRNLGCLFCPSTDEVEV*QPQPLR Trigger: TCTCAGGGGCTGGGGCTGCAAGACTTCGACCTCATC...GGTGCTGGGACAGAACAGGCAGCCCAGGTTTCTGACACCATATCCCAAGTCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCGTGTTCATGTCAGGGTaGTCCGTGATGATGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLDAPLRSWWPASLPGCVFMSG*SVMMSK Trigger: CTTTGACATCATCACGGACAACCCTGACATGAACAC...GCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | CCCCTGGGTGATGCCACCCATGAGCAGTGCCACCCCTGGGCAGGTATCTCTGTTTCCTCACAGAGGTCCTaGAATGTTGTCATGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: PLGDATHEQCHPWAGISVSSQRS*NVVMAS Trigger: GGATGCCATGACAACATTCAAGGACCTCTGTGAGGA...AACAGAGATACCTGCCCAGGGGTGGCACTGCTCATGGGTGGCATCACCCAGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000105624.2 |
||
| CDS-3UTR CAA 90 bp | AAGTGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTCTACACCATCGTTCTaGTCATCTACTGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: KCLLDAPLRSWWPASLPGSTPSF*SSTGGS Trigger: AGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGA...GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | AAGTGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCGACAGCAGAAGTGGGTaGATGTACTCAAAGCCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: KCLLDAPLRSWWPASLPGDSRSG*MYSKPS Trigger: TGAAGGCTTTGAGTACATCAACCCACTTCTGCTGTC...GCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCACTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | TGTAACAATTCTTGTTGCAGCGCATCCCTGCAGGCACTTGGGTGCCTGTCCCCTGTTAAAGCGCTTGGCTaGGAAGAGGTGGCCGTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: CNNSCCSASLQALGCLSPVKALG*EEVAVG Trigger: GCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAAC...AGGGGACAGGCACCCAAGTGCCTGCAGGGATGCGCTGCAACAAGAATTGTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTCAGTGCATCGAGTTCTGCCAACCAGGAAGGGGTaGCTGGACGCCTGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LRALHANFSWSGSVHRVLPTRKG*LDACSN Trigger: GTTTGAGCAGGCGTCCAGCAACCCCTTCCTGGTTGG...CAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | GCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCTTGGAGCCTCGGCAGCCAAGCCTCTCTTaGGGATCCTTATTTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: APLRSWWPASLPGCLEPRQPSLS*GSLFKN Trigger: ATTTTTAAATAAGGATCCCAAAGAGAGGCTTGGCTG...CCGAGGCTCCAAGCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | TGTTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCAAGACGTGTGAGGCCTaGACAGACAGGAAACGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: CFCGRCAPFQTAWLAVSPKTCEA*TDRKRG Trigger: TCCCCGTTTCCTGTCTGTCAAGGCCTCACACGTCTT...GGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | TGCCTGTTGGACGCCCCTCTTCGGTCTTGGTGGCCAGCATCCCTCCCTGGCTGCCAGCCAAGCCTCTCTTaGGGATCCTTATTTAAAAAT | + |
|
Preference number: 5 (lower is better) Translates to: CLLDAPLRSWWPASLPGCQPSLS*GSLFKN Trigger: ATTTTTAAATAAGGATCCCAAAGAGAGGCTTGGCTG...GCAGCCAGGGAGGGATGCTGGCCACCAAGACCGAAGAGGGGCGTCCAACAGGCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS TCA 90 bp | TGCTTCTTTTCCAGCAGGTCCCAGTCTATGCTGCGGAAGAAAGCATaGGACTTGATGTCGGAAAACCCAGTCTGTGGCCGGCAGCCAAGC | + |
|
Preference number: 5 (lower is better) Translates to: CFFSSRSQSMLRKKA*DLMSENPVCGRQPS Trigger: GCTTGGCTGCCGGCCACAGACTGGGTTTTCCGACATCAAGTCTCATGCTTTCTTCCGCAGCATAGACTGGGACCTGCTGGAAAAGAAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS CCA 90 bp | GTAGATGGACTTGTCTTCTCCAGGACAAGGCATGCCCGGCTGCTCTaGGATGCTTGGGAAAACATGAATGATGAGCACTTCGTCCCTGCC | + |
|
Preference number: 5 (lower is better) Translates to: VDGLVFSRTRHARLL*DAWENMNDEHFVPA Trigger: GGCAGGGACGAAGTGCTCATCATTCATGTTTTCCCAAGCATCCCAGAGCAGCCGGGCATGCCTTGTCCTGGAGAAGACAAGTCCATCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCGATGAGGTCGAAGTCTaGCAGCCCCAGCCCCTGAGA | + |
|
Preference number: 5 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSDEVEV*QPQPLR Trigger: TCTCAGGGGCTGGGGCTGCAAGACTTCGACCTCATC...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | CTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGTCAGTGCATCGAGTTCTGTCCTCACAGAGGTCCTaGAATGTTGTCATGGCATCC | + |
|
Preference number: 5 (lower is better) Translates to: LRALHANFSWSGSVHRVLSSQRS*NVVMAS Trigger: GGATGCCATGACAACATTCAAGGACCTCTGTGAGGA...CAGAACTCGATGCACTGACCCGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030922.15 |
||
| CDS-3UTR CAA 90 bp | AGGAGGATGGCTGAGCACAGCAGTTATGGAAGCAGGCGTGCTTCCTCAGGAAGATCTACACCATCGTTCTaGTCATCTACTGGAGGCTCT | + |
|
Preference number: 5 (lower is better) Translates to: RRMAEHSSYGSRRASSGRSTPSF*SSTGGS Trigger: AGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGA...TCTTCCTGAGGAAGCACGCCTGCTTCCATAACTGCTGTGCTCAGCCATCCTCCT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTACCAACCAGGAAGGGGTaGCTGGACGCCTGCTCAAAC | + |
|
Preference number: 5 (lower is better) Translates to: RHQRKLRHHRYTLFLRALPTRKG*LDACSN Trigger: GTTTGAGCAGGCGTCCAGCAACCCCTTCCTGGTTGG...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS CCA 90 bp | CGATATCCTCGTCGTCGTGGACAAGCTCCTTCTTTACCACCTTCATaGCGTAAATCTGGTCGTTTTTCTTCAACCGCACCAGGAGGACCT | + |
|
Preference number: 5 (lower is better) Translates to: RYPRRRGQAPSLPPS*RKSGRFSSTAPGGP Trigger: AGGTCCTCCTGGTGCGGTTGAAGAAAAACGACCAGATTTACGCCATGAAGGTGGTAAAGAAGGAGCTTGTCCACGACGACGAGGATATCG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCGGAACAACCGGCTCGTaGTCTGGAAGCAGGAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSGTTGS*SGSRSV Trigger: TACACTCCTGCTTCCAGACAACGAGCCGGTTGTTCC...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
||
| CDS-3UTR CAA 90 bp | ATCATCGGTACACTTTATTCCTCAGGGCATTACACGCTAACTTTTCCTGGAGCGGGAACAACCGGCTCGTaGTCTGGAAGCAGGAGTGTA | + |
|
Preference number: 5 (lower is better) Translates to: IIGTLYSSGHYTLTFPGAGTTGS*SGSRSV Trigger: TACACTCCTGCTTCCAGACAACGAGCCGGTTGTTCC...CGCTCCAGGAAAAGTTAGCGTGTAATGCCCTGAGGAATAAAGTGTACCGATGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR CAA 90 bp | TTTCTGTGGAAGATGTGCACCTTTCCAAACGGCGTGGCTGGCTGTCTCACCCTCCTTTTCCAGGATAACTaGGAAAAGGTAGTCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: FLWKMCTFPNGVAGCLTLLFQDN*EKVVFS Trigger: ACTGAAGACTACCTTTTCCAAGTTATCCTGGAAAAG...GAGGGTGAGACAGCCAGCCACGCCGTTTGGAAAGGTGCACATCTTCCACAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR CAA 90 bp | AGGCATCAGAGGAAGCTTCGACATCATCGGTACACTTTATTCCTCAGGGCATTAGACAGCAGAAGTGGGTaGATGTACTCAAAGCCTTCA | + |
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Preference number: 5 (lower is better) Translates to: RHQRKLRHHRYTLFLRALDSRSG*MYSKPS Trigger: TGAAGGCTTTGAGTACATCAACCCACTTCTGCTGTC...TAATGCCCTGAGGAATAAAGTGTACCGATGATGTCGAAGCTTCCTCTGATGCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS-3UTR CAA 90 bp | CATGCATATGCTGTAGTTAAGGGTAAAGTGACAGGGTCATTCACAGGCGTGTCCCTTTTCCAGGATAACTaGGAAAAGGTAGTCTTCAGT | + |
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Preference number: 5 (lower is better) Translates to: HAYAVVKGKVTGSFTGVSLFQDN*EKVVFS Trigger: ACTGAAGACTACCTTTTCCAAGTTATCCTGGAAAAG...GGACACGCCTGTGAATGACCCTGTCACTTTACCCTTAACTACAGCATATGCATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS CAA 72 bp | CTGCACTGGCCGCAGTACGCTCCCCTGTTAAAGCGCTaGGCTTGGAAGAGGTGGCCGTTGGCTCGGTACAGC | + |
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Preference number: 6 (lower is better) Translates to: LHWPQYAPLLKR*AWKRWPLARYS Trigger: GCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCAGTGCAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CCA 72 bp | TGGCCGCAGTACGCTCCCCTGTTAAAGCGCTTGGCTTaGAAGAGGTGGCCGTTGGCTCGGTACAGCTTCCTC | + |
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Preference number: 6 (lower is better) Translates to: WPQYAPLLKRLA*KRWPLARYSFL Trigger: GAGGAAGCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CCA 72 bp | CCCTGCCTCGAGAGACCCCATATCCTTTCGCTGCACTaGCCGCAGTACGCTCCCCTGTTAAAGCGCTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: PCLERPHILSLH*PQYAPLLKRLA Trigger: AGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCAGTGCAGCGAAAGGATATGGGGTCTCTCGAGGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CAA 72 bp | CTGGCCGCAGTACGCTCCCCTGTTAAAGCGCTTGGCTaGGAAGAGGTGGCCGTTGGCTCGGTACAGCTTCCT | + |
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Preference number: 6 (lower is better) Translates to: LAAVRSPVKALG*EEVAVGSVQLP Trigger: AGGAAGCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS GCA 72 bp | CCTTCACTGTCCACCCACTTGAGGGTGAGTGGGTGCTaGTGGTGCAGGCCACACATGTCTCGCACTTCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PSLSTHLRVSGC*WCRPHMSRTSS Trigger: TGAGGAAGTGCGAGACATGTGTGGCCTGCACCAGCAGCACCCACTCACCCTCAAGTGGGTGGACAGTGAAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000105624.2 |
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| CDS CAA 90 bp | TTCGCTGCACTGGCCGCAGTACGCTCCCCTGTTAAAGCGCTTGGCTaGGAAGAGGTGGCCGTTGGCTCGGTACAGCTTCCTCCATCTTCT | + |
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Preference number: 6 (lower is better) Translates to: FAALAAVRSPVKALG*EEVAVGSVQLPPSS Trigger: AGAAGATGGAGGAAGCTGTACCGAGCCAACGGCCACCTCTTCCAAGCCAAGCGCTTTAACAGGGGAGCGTACTGCGGCCAGTGCAGCGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CAA 90 bp | TGCTGGTGCAGGCCACACATGTCTCGCACTTCCTCACAGAGGTCCTaGAATGTTGTCATGGCATCCACGCTGGTAATCAGGATGTCCCCG | + |
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Preference number: 6 (lower is better) Translates to: CWCRPHMSRTSSQRS*NVVMASTLVIRMSP Trigger: CGGGGACATCCTGATTACCAGCGTGGATGCCATGACAACATTCAAGGACCTCTGTGAGGAAGTGCGAGACATGTGTGGCCTGCACCAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000105624.2 |
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| CDS TCA 72 bp | TCCAGCAGGTCCCAGTCTATGCTGCGGAAGAAAGCATaGGACTTGATGTCGGAAAACCCAGTCTGTGGCCGG | + |
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Preference number: 6 (lower is better) Translates to: SSRSQSMLRKKA*DLMSENPVCGR Trigger: CCGGCCACAGACTGGGTTTTCCGACATCAAGTCTCATGCTTTCTTCCGCAGCATAGACTGGGACCTGCTGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS CAA 72 bp | AGGCCACACATGTCTCGCACTTCCTCACAGAGGTCCTaGAATGTTGTCATGGCATCCACGCTGGTAATCAGG | + |
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Preference number: 6 (lower is better) Translates to: RPHMSRTSSQRS*NVVMASTLVIR Trigger: CCTGATTACCAGCGTGGATGCCATGACAACATTCAAGGACCTCTGTGAGGAAGTGCGAGACATGTGTGGCCT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000105624.2 |
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| CDS CCA 72 bp | GAAAGCATGAGACTTGATGTCGGAAAACCCAGTCTGTaGCCGGCAGCCAAGCCTCTCTTTGGGATCCTTATT | + |
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Preference number: 6 (lower is better) Translates to: ESMRLDVGKPSL*PAAKPLFGILI Trigger: AATAAGGATCCCAAAGAGAGGCTTGGCTGCCGGCCACAGACTGGGTTTTCCGACATCAAGTCTCATGCTTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS CCA 72 bp | TCTACACCATCGTTCTTGTCATCTACTGGAGGCTCTTaGGAAGGCATGACAGAATCCATATGCCTCCTGCAG | + |
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Preference number: 6 (lower is better) Translates to: STPSFLSSTGGS*EGMTESICLLQ Trigger: CTGCAGGAGGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CCA 72 bp | CGTCGTCGTGGACAAGCTCCTTCTTTACCACCTTCATaGCGTAAATCTGGTCGTTTTTCTTCAACCGCACCA | + |
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Preference number: 6 (lower is better) Translates to: RRRGQAPSLPPS*RKSGRFSSTAP Trigger: TGGTGCGGTTGAAGAAAAACGACCAGATTTACGCCATGAAGGTGGTAAAGAAGGAGCTTGTCCACGACGACG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 |
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| CDS CAA 72 bp | GTCTACACCATCGTTCTTGTCATCTACTGGAGGCTCTaGGGAAGGCATGACAGAATCCATATGCCTCCTGCA | + |
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Preference number: 6 (lower is better) Translates to: VYTIVLVIYWRL*GRHDRIHMPPA Trigger: TGCAGGAGGCATATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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| CDS CAA 72 bp | TCAGTTTCTTCTGAAGGAAGGTCTACACCATCGTTCTaGTCATCTACTGGAGGCTCTTGGGAAGGCATGACA | + |
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Preference number: 6 (lower is better) Translates to: SVSSEGRSTPSF*SSTGGSWEGMT Trigger: TGTCATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGACCTTCCTTCAGAAGAAACTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000030922.15 ENSMUST00000103178.11 ENSMUST00000123652.8 ENSMUST00000131975.8 |
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| CDS CAA 90 bp | GCAATTCCATCAGTTTCTTCTGAAGGAAGGTCTACACCATCGTTCTaGTCATCTACTGGAGGCTCTTGGGAAGGCATGACAGAATCCATA | + |
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Preference number: 6 (lower is better) Translates to: AIPSVSSEGRSTPSF*SSTGGSWEGMTESI Trigger: TATGGATTCTGTCATGCCTTCCCAAGAGCCTCCAGTAGATGACAAGAACGATGGTGTAGACCTTCCTTCAGAAGAAACTGATGGAATTGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000030922.15 ENSMUST00000131975.8 |
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