Pregenerated sensors for PRKCQ (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026778Ensembl transcript IDs: ENSMUST00000028118.9, ENSMUST00000102970.5
Found 180 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTTCCCCTTTCCCTCCCTTCTGTCATCGACATTTCCACAGACATaGACACATCAACGTGGCTTAGTGGTTCCTTCTCTGTGGTTGAGT | + |
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Preference number: 1 (lower is better) Translates to: SFPFPSLLSSTFPQT*THQRGLVVPSLWLS Trigger: ACTCAACCACAGAGAAGGAACCACTAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGGAAAGGGGAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR GCA 90 bp | CTGACTACTGCAAATAGCATGCATGGGTTGGGTTGTCTTGCAGGATaGCTAAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACG | + |
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Preference number: 1 (lower is better) Translates to: LTTANSMHGLGCLAG*LRRDLFAIKSLGTT Trigger: CGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTTAGGCATCCTGCAAGACAACCCAACCCATGCATGCTATTTGCAGTAGTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR TCA 90 bp | CATCGCACGATATTGTGTATAGTTAGGACTCTAACTCAACAGGACTaGCTACTGCAAATAGCATGCATGGGTTGGGTTGTCTTGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: HRTILCIVRTLTQQD*LLQIACMGWVVLQD Trigger: ATCCTGCAAGACAACCCAACCCATGCATGCTATTTGCAGTAGTCAGTCCTGTTGAGTTAGAGTCCTAACTATACACAATATCGTGCGATG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR CAA 90 bp | GACTCTAACTCAACAGGACTGACTACTGCAAATAGCATGCATGGGTaGGGTTGTCTTGCAGGATGCCTAAGGAGGGACTTATTTGCCATC | + |
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Preference number: 2 (lower is better) Translates to: DSNSTGLTTANSMHG*GCLAGCLRRDLFAI Trigger: GATGGCAAATAAGTCCCTCCTTAGGCATCCTGCAAGACAACCCAACCCATGCATGCTATTTGCAGTAGTCAGTCCTGTTGAGTTAGAGTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR GCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTAGGGCAAGAGCAGAACTaGATTTCGAATCTTTCACAG | + |
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Preference number: 2 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLGQEQN*ISNLSQ Trigger: CTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCC...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR CCA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGCCACCCTGCCCTTGTTaGTTATACTTTCCTTCTGTG | + |
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Preference number: 2 (lower is better) Translates to: KEGLICHQITGNNVIRDWPPCPC*LYFPSV Trigger: CACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGG...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR GCA 90 bp | CTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCAAGTCCTCCCTGCCTTTaGAGTGTTTCTTTTCTTCTC | + |
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Preference number: 2 (lower is better) Translates to: LGNFGASQNEQICKFQVSSPPCL*SVSFLL Trigger: GAGAAGAAAAGAAACACTGCAAAGGCAGGGAGGACT...TGAAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR GCA 90 bp | GCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTACATTTCCACAGACATaGACACATCAACGTGGCTTA | + |
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Preference number: 2 (lower is better) Translates to: ALGILGLARMNRFVNFKFTFPQT*THQRGL Trigger: TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGT...AAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR CCA 72 bp | ATGTTCCACGTAGGCGACATCCTTACCCTTCCCTGTTaGCGACAAAGGGCTCTGCTAAGCTCACTGCCCTTT | + |
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Preference number: 3 (lower is better) Translates to: MFHVGDILTLPC*RQRALLSSLPF Trigger: AAAGGGCAGTGAGCTTAGCAGAGCCCTTTGTCGCCAACAGGGAAGGGTAAGGATGTCGCCTACGTGGAACAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR GCA 72 bp | GGGAGGGCAGGTTTGATTGGCAGCTGTAAACCACCCTaGCCTTGTTGGTTATACTTTCCTTCTGTGTGTATA | + |
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Preference number: 3 (lower is better) Translates to: GRAGLIGSCKPP*PCWLYFPSVCI Trigger: TATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCTGCCAATCAAACCTGCCCTCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR CAA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCACAGTCCTCCCTGCCTTaGCAGTGTTTCTTTTCTTCT | + |
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Preference number: 3 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSQSSLP*QCFFSS Trigger: AGAAGAAAAGAAACACTGCAAAGGCAGGGAGGACTG...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR GCA 72 bp | CATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTaGTCAGAGCTTCCCCTTTCCCTCCCTTCTGTCATC | + |
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Preference number: 3 (lower is better) Translates to: HAMFIGELPITI*SELPLSLPSVI Trigger: GATGACAGAAGGGAGGGAAAGGGGAAGCTCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR TCA 72 bp | ATTGACTTCTATAACAGGCGATCACTGCTCCAGTCTTaGGAAATCTGTTCCACTTGCGCCTTGGTTCATCAC | + |
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Preference number: 3 (lower is better) Translates to: IDFYNRRSLLQS*EICSTCALVHH Trigger: GTGATGAACCAAGGCGCAAGTGGAACAGATTTCTCAAGACTGGAGCAGTGATCGCCTGTTATAGAAGTCAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR CCA 72 bp | TGCACACATCAACGTGGCTTAGTGGTTCCTTCTCTGTaGTTGAGTGGAATTGACTTCTATAACAGGCGATCA | + |
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Preference number: 3 (lower is better) Translates to: CTHQRGLVVPSL*LSGIDFYNRRS Trigger: TGATCGCCTGTTATAGAAGTCAATTCCACTCAACCACAGAGAAGGAACCACTAAGCCACGTTGATGTGTGCA 46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR TCA 72 bp | ATATTGTGTATAGTTAGGACTCTAACTCAACAGGACTaGCTACTGCAAATAGCATGCATGGGTTGGGTTGTC | + |
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Preference number: 3 (lower is better) Translates to: ILCIVRTLTQQD*LLQIACMGWVV Trigger: GACAACCCAACCCATGCATGCTATTTGCAGTAGTCAGTCCTGTTGAGTTAGAGTCCTAACTATACACAATAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR-3UTR CAA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGAGTTCCTTCTCTGTGGTaGAGTGGAATTGACTTCTAT | + |
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Preference number: 3 (lower is better) Translates to: FQVSCYVYWRASHYNLLRVPSLW*SGIDFY Trigger: ATAGAAGTCAATTCCACTCAACCACAGAGAAGGAAC...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR TCA 72 bp | TTTATCTTAGAAGAGTCATGCATTTTATTTCTTGTATaGTGGGAGGATGGTAATGAGTGCCTACCTACGCTG | + |
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Preference number: 3 (lower is better) Translates to: FILEESCILFLV*WEDGNECLPTL Trigger: CAGCGTAGGTAGGCACTCATTACCATCCTCCCATCATACAAGAAATAAAATGCATGACTCTTCTAAGATAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTATCCTCGTCCTGCCCGTaGAAGGGGGACTGGCCAATC | + |
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Preference number: 4 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLSSSCP*KGDWPI Trigger: GATTGGCCAGTCCCCCTTCCACGGGCAGGACGAGGA...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CAAGTCACACAAGGAGCTCAGCAGTCCTCCCTGCCTTTGCAGTGTTTCTTTTCTGGACTTTGGCCTGTTTaGTGGCTCCTCGGCGCTGAT | + |
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Preference number: 4 (lower is better) Translates to: QVTQGAQQSSLPLQCFFSGLWPV*WLLGAD Trigger: ATCAGCGCCGAGGAGCCATCAAACAGGCCAAAGTCC...AGAAAAGAAACACTGCAAAGGCAGGGAGGACTGCTGAGCTCCTTGTGTGACTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | TGCTCAGAGCTTCCCCTTTCCCTCCCTTCTGTCATCGACATTTCCACAGACATGCAGTTTCAGCTGCAGTaGAGTCCTGCGCATGCTCAC | + |
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Preference number: 4 (lower is better) Translates to: CSELPLSLPSVIDISTDMQFQLQ*SPAHAH Trigger: GTGAGCATGCGCAGGACTTCACTGCAGCTGAAACTG...CATGTCTGTGGAAATGTCGATGACAGAAGGGAGGGAAAGGGGAAGCTCTGAGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | GGCGTGGTTTGTGCTGTAGGTAACAAGTCACACAAGGAGCTCAGCAGTCCTCCCATTCCACATACTCTTTaGCAAGCACAGCGCAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: GVVCAVGNKSHKELSSPPIPHTL*QAQRSR Trigger: CCTACTGCGCTGTGCTTGTCAAAGAGTATGTGGAAT...GGGAGGACTGCTGAGCTCCTTGTGTGACTTGTTACCTACAGCACAAACCACGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CCACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCGGGAATCCCAGGAAATaGCCTGGGGTTCTCTTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PPPEVLLEPVPREKANPFGNPRK*PGVLFS Trigger: GGAAAAGAGAACCCCAGGGCATTTCCTGGGATTCCC...GAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCTGGTTTCTCGGCTATTaGTTGCGGATCCTGTGCACT | + |
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Preference number: 4 (lower is better) Translates to: HPQKCYLNQFPERRQIPSWFLGY*LRILCT Trigger: AGTGCACAGGATCCGCAATCAATAGCCGAGAAACCA...GGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGCACATGCATCACATTTaGGTCCTTGCCTCGCCAGCC | + |
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Preference number: 4 (lower is better) Translates to: QKCYLNQFPERRQIPSSLHMHHI*VLASPA Trigger: GGCTGGCGAGGCAAGGACTCAAATGTGATGCATGTG...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | TGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGGGAACCATCACTAGAAGGTCCTTaGCCTCCCTTTCGAGCCACC | + |
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Preference number: 4 (lower is better) Translates to: CLGQEQNCISNLSQHREPSLEGP*PPFRAT Trigger: GGTGGCTCGAAAGGGAGGCCAAGGACCTTCTAGTGA...TGGTTCCCGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR CAA 72 bp | CCACTTGCGCCTTGGTTCATCACCAACCAGCAGCTGTaGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCT | + |
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Preference number: 4 (lower is better) Translates to: PLAPWFITNQQL*SRARAELHFES Trigger: AGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACAACAGCTGCTGGTTGGTGATGAACCAAGGCGCAAGTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | TGCTCAGAGCTTCCCCTTTCCCTCCCTTCTGTCATCGACATTTCCACAGACATGCGGTTGTTTCTGAGATaGGGTCTACATTCTTGCCCT | + |
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Preference number: 4 (lower is better) Translates to: CSELPLSLPSVIDISTDMRLFLR*GLHSCP Trigger: AGGGCAAGAATGTAGACCTCATCTCAGAAACAACCG...CATGTCTGTGGAAATGTCGATGACAGAAGGGAGGGAAAGGGGAAGCTCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | GGCAGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAGCTGCAGTGAAGTCCTaGGCATGCTCACTTCGGGTT | + |
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Preference number: 4 (lower is better) Translates to: GSCKPPCPCWLYFPSVCIAAVKS*ACSLRV Trigger: AACCCGAAGTGAGCATGCGCAGGACTTCACTGCAGC...TATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | TGCTCAGAGCTTCCCCTTTCCCTCCCTTCTGTCATCGACATTTCCACAGACATGCTGCCAGGAAGACCTTaGCAAAACTTCCTTTTCCCA | + |
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Preference number: 4 (lower is better) Translates to: CSELPLSLPSVIDISTDMLPGRP*QNFLFP Trigger: TGGGAAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAG...CATGTCTGTGGAAATGTCGATGACAGAAGGGAGGGAAAGGGGAAGCTCTGAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | AGGAGCTCAGCAGTCCTCCCTGCCTTTGCAGTGTTTCTTTTCTTCTCTAACGTGTCTCGAAACAAAGGATaGTGGCGGATGTCTCCTCTC | + |
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Preference number: 4 (lower is better) Translates to: RSSAVLPAFAVFLFFSNVSRNKG*WRMSPL Trigger: GAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGA...CACGTTAGAGAAGAAAAGAAACACTGCAAAGGCAGGGAGGACTGCTGAGCTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CCACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCCCAAGGTGGGTACATaGTTGGCTTTTTCTGGATGT | + |
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Preference number: 4 (lower is better) Translates to: PPPEVLLEPVPREKANPFPKVGT*LAFSGC Trigger: ACATCCAGAAAAAGCCAACCATGTACCCACCTTGGG...GAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTAGGTGCTGTCCCAAGGTaGGTACATGGTTGGCTTTTT | + |
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Preference number: 4 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLGAVPR*VHGWLF Trigger: AAAAAGCCAACCATGTACCCACCTTGGGACAGCACC...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGATTCACTGCCTCTCCCTaGCAAGCTTGGCAGGTCCCA | + |
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Preference number: 4 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRFTASP*QAWQVP Trigger: TGGGACCTGCCAAGCTTGTCAGGGAGAGGCAGTGAA...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | TGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGGGAACCAACTGCAGACCAAGGATaGCCTCAGCAGCATAAAACG | + |
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Preference number: 4 (lower is better) Translates to: CLGQEQNCISNLSQHREPTADQG*PQQHKT Trigger: CGTTTTATGCTGCTGAGGTCATCCTTGGTCTGCAGT...TGGTTCCCGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CAGCTGTTGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGAGCGAGCCTGTTGGGTaGTTTCAATCATCGCTAGTG | + |
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Preference number: 4 (lower is better) Translates to: QLLSRARAELHFESFTASSEPVG*FQSSLV Trigger: CACTAGCGATGATTGAAAGCACCCAACAGGCTCGCT...CGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACAACAGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGCTTCCCTTGTTAATGTaGGCGTCAAAGGTGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: QKCYLNQFPERRQIPSSLLPLLM*ASKVLS Trigger: GGACAGCACCTTTGACGCCCACATTAACAAGGGAAG...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGATCCATGCGGATGGAGTaGAACAGCTCCTCCTCGTCC | + |
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Preference number: 4 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRSMRME*NSSSSS Trigger: GGACGAGGAGGAGCTGTTCCACTCCATCCGCATGGA...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| 3UTR CAA 72 bp | TCAACAGGACTGACTACTGCAAATAGCATGCATGGGTaGGGTTGTCTTGCAGGATGCCTAAGGAGGGACTTA | + |
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Preference number: 4 (lower is better) Translates to: STGLTTANSMHG*GCLAGCLRRDL Trigger: TAAGTCCCTCCTTAGGCATCCTGCAAGACAACCCAACCCATGCATGCTATTTGCAGTAGTCAGTCCTGTTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | TGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGGGAACCAACTGATTGGTTCTCTTaGACTCTGCCAGGAAGACCT | + |
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Preference number: 4 (lower is better) Translates to: CLGQEQNCISNLSQHREPTDWFS*TLPGRP Trigger: AGGTCTTCCTGGCAGAGTTCAAGAGAACCAATCAGT...TGGTTCCCGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCTTAAGTCGCCTCCATTaGGATACTCCATCACGAAAA | + |
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Preference number: 4 (lower is better) Translates to: HPQKCYLNQFPERRQIPSLSRLH*DTPSRK Trigger: TTTTCGTGATGGAGTATCTCAATGGAGGCGACTTAA...GGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CAAGTCACACAAGGAGCTCAGCAGTCCTCCCTGCCTTTGCAGTGTTTCTTTTCTACAATTCCTTTGGAATaGAGGAACTGCAGACCAAGG | + |
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Preference number: 4 (lower is better) Translates to: QVTQGAQQSSLPLQCFFSTIPLE*RNCRPR Trigger: CCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATTGT...AGAAAAGAAACACTGCAAAGGCAGGGAGGACTGCTGAGCTCCTTGTGTGACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | GGCAGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATATTTGTCTGGCATCGGTaGTGGACGTTCATGCCACAT | + |
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Preference number: 4 (lower is better) Translates to: GSCKPPCPCWLYFPSVCIFVWHR*WTFMPH Trigger: ATGTGGCATGAACGTCCACCACCGATGCCAGACAAA...TATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCTGCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CCACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCGCTACAGTCATATGGTaGTTTCACTTTTGGTCTGAA | + |
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Preference number: 4 (lower is better) Translates to: PPPEVLLEPVPREKANPFATVIW*FHFWSE Trigger: TTCAGACCAAAAGTGAAATCACCATATGACTGTAGC...GAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCATCGGCGCTGATGCAGTaGAAAGAATCCTTCATTCTC | + |
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Preference number: 4 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSSALMQ*KESFIL Trigger: GAGAATGAAGGATTCTTTGCACTGCATCAGCGCCGA...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGGACGTTCATGCCACATaGATCACATTTGAGTCCTTG | + |
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Preference number: 4 (lower is better) Translates to: QKCYLNQFPERRQIPSSLDVHAT*ITFESL Trigger: CAAGGACTCAAATGTGATGCATGTGGCATGAACGTC...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCAGGTTCTCTTGAACTCTaGCAGGAAGACCTTGCCAAA | + |
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Preference number: 4 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSGSLEL*QEDLAK Trigger: TTTGGCAAGGTCTTCCTGGCAGAGTTCAAGAGAACC...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CAGCTGTTGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGTGTGTTAGAAATGGATaGTCCCATGCCAAGGACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QLLSRARAELHFESFTASCVRNG*SHAKDR Trigger: TCTGTCCTTGGCATGGGAGCATCCATTTCTAACACA...CGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACAACAGCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCTTATACCACAAAGATTaGCAACCTTTGTCTGGCATC | + |
|
Preference number: 4 (lower is better) Translates to: HPQKCYLNQFPERRQIPSLYHKD*QPLSGI Trigger: GATGCCAGACAAAGGTTGCCAATCTTTGTGGTATAA...GGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCAGAGACCAATTTCAACTaGGCCTTCTCGGAAGATGTG | + |
|
Preference number: 4 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSETNFN*AFSEDV Trigger: CACATCTTCCGAGAAGGCCCAGTTGAAATTGGTCTC...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGGCCTGGTTTCGTTTTTaGTGGAGCATGGGAGACCAA | + |
|
Preference number: 4 (lower is better) Translates to: KEGLICHQITGNNVIRDWAWFRF*WSMGDQ Trigger: TTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGC...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTAGAGAGTCTCCATCCCTaGGTTAATGAAGGAAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLESLHP*VNEGKV Trigger: AACTTTTCCTTCATTAACCCAGGGATGGAGACTCTC...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGCATCTGCCCATTTTCTaGTTCCACATACTCTTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QKCYLNQFPERRQIPSSLHLPIF*FHILFD Trigger: GTCAAAGAGTATGTGGAATCAGAAAATGGGCAGATG...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGAGAATGGTTGTACTTCTaGCCCAGCAAGATCTCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SCKPPCPCWLYFPSVCIREWLYF*PSKISG Trigger: TCCGGAGATCTTGCTGGGTCAGAAGTACAACCATTC...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR GCA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGATCACATTTGAGTCCTTaGCTCGCCAGCCCCCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: FQVSCYVYWRASHYNLLRSHLSP*LASPQS Trigger: GCTCTGGGGGCTGGCGAGGCAAGGACTCAAATGTGA...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTAATGGTTGGCTTTTTCTaGATGTACATCTGCCCATTT | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLMVGFF*MYICPF Trigger: AAATGGGCAGATGTACATCCAGAAAAAGCCAACCAT...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | GGCAGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGACAGAGCAAAATGTaGGTTGAGGGAAAAAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GSCKPPCPCWLYFPSVCIRQSKM*VEGKRW Trigger: CCACCTTTTTCCCTCAACCCACATTTTGCTCTGTCT...TATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCTGCC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCATGGCAACTTTGGATGTaGTACATTAAGTCGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSWQLWM*YIKSPP Trigger: TGGAGGCGACTTAATGTACCACATCCAAAGTTGCCA...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTACATAAAACGTGGCTCTaGAAAGATCAAATTTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLHKTWL*KDQICG Trigger: GCCACAAATTTGATCTTTCCAGAGCCACGTTTTATG...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR TCA 90 bp | AGAGTTAATAATGATCTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATTCTTGCCCTTCACGATaGTCTGCATCACCCTTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: RVNNDLTSRAAVRDSRRYSCPSR*SASPFP Trigger: AGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGA...ATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAGATCATTATTAACTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR TCA 90 bp | CAAGTCACACAAGGAGCTCAGCAGTCCTCCCTGCCTTTGCAGTGTTTCTTTTCTCAAAGTCTGCTATTTTaGTATGTCCATCTCTGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: QVTQGAQQSSLPLQCFFSQSLLF*YVHLCL Trigger: TAGACAGAGATGGACATATCAAAATAGCAGACTTTG...AGAAAAGAAACACTGCAAAGGCAGGGAGGACTGCTGAGCTCCTTGTGTGACTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR GCA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGAAAATGGATGCTCCCATaGCAAGGACAGAACCCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRKWMLP*QGQNPL Trigger: AAGAGGGTTCTGTCCTTGGCATGGGAGCATCCATTT...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | CTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCAGTCTGGCATCGGTGGTaGACGTTCATGCCACATGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGNFGASQNEQICKFQVSVWHRW*TFMPHA Trigger: TGCATGTGGCATGAACGTCCACCACCGATGCCAGAC...TGAAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | GGCAGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAGCACATCCCAAAGTCTaGTATTTTGATATGTCCATC | + |
|
Preference number: 4 (lower is better) Translates to: GSCKPPCPCWLYFPSVCIAHPKV*YFDMSI Trigger: GATGGACATATCAAAATAGCAGACTTTGGGATGTGC...TATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGAAAAGAGATTTTCCTTaGTCTGGAATGTGCAGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QKCYLNQFPERRQIPSSLKRDFP*SGMCRT Trigger: TGTTCTGCACATTCCAGACCAAGGAAAATCTCTTTT...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAGGTTGTCCATGCGGATaGAGTGGAACAGCTCCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARGCPCG*SGTAPP Trigger: AGGAGGAGCTGTTCCACTCCATCCGCATGGACAACC...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR TCA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGAACCGGCCGATTTATTTaGCCCATCCAAAGGGGAATC | + |
|
Preference number: 4 (lower is better) Translates to: FQVSCYVYWRASHYNLLRTGRFI*PIQRGI Trigger: GATTCCCCTTTGGATGGGTCAAATAAATCGGCCGGT...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR GCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAAGAAGGGGTTGTCCATaGGGATGGAGTGGAACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARRRGCP*GWSGTA Trigger: AGCTGTTCCACTCCATCCGCATGGACAACCCCTTCT...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGTCCCACAGTCAAAGTTaGATAAACCGATTCGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: KEGLICHQITGNNVIRDWSHSQS*INRFEE Trigger: TTCTTCGAATCGGTTTATCCAACTTTGACTGTGGGA...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGACGAAACAAAGGATGCTaGCGGATGTCTCCTCTCACT | + |
|
Preference number: 4 (lower is better) Translates to: FQVSCYVYWRASHYNLLRRNKGC*RMSPLT Trigger: AGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCG...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | AGAGTTAATAATGATCTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATCAAGCTCTTCCCAGTTaGTCTCTCGAAACAAAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: RVNNDLTSRAAVRDSRRYQALPS*SLETKD Trigger: ATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTG...ATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAGATCATTATTAACTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAACGGGATGATGTCAATTCCTTGTCGAAATTaGTACAGTCATATGGTGATT | + |
|
Preference number: 4 (lower is better) Translates to: LTSRAAVRDSRRYNGMMSIPCRN*YSHMVI Trigger: AATCACCATATGACTGTAGCAATTTCGACAAGGAAT...TGACATCATCCCGTTATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | AGAGTTAATAATGATCTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATCCCCAGACAAATTCATaGCAGACAGAGCAAAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: RVNNDLTSRAAVRDSRRYPQTNS*QTEQNV Trigger: CACATTTTGCTCTGTCTGCCATGAATTTGTCTGGGG...ATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAGATCATTATTAACTCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | AGAGTTAATAATGATCTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATGTTTTTGGTGGAGCATaGGAGACCAATTTCAACTGG | + |
|
Preference number: 4 (lower is better) Translates to: RVNNDLTSRAAVRDSRRYVFGGA*ETNFNW Trigger: CCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAAC...ATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAGATCATTATTAACTCT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | TACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGCCCTTCACGATGATCTaGATCACCCTTCCCTTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: YISTLSSQHLINIYKHRTPFTMI*ITLPLL Trigger: TAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGG...CGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGTA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | TGCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTCCTTGGTCTGGAATGTaGAGAACATGTGTGTTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: CLGNFGASQNEQICKFQVPWSGM*RTCVLE Trigger: TTCTAACACACATGTTCTGCACATTCCAGACCAAGG...AACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | GCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCTAGCATGTTCTCTTTaGACATCCCAAAGTCTGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALGILGLARMNRFVNFKFLACSL*TSQSLL Trigger: TAGCAGACTTTGGGATGTGCAAAGAGAACATGCTAG...AAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | TGCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTGGTTTCGTTTTTGGTaGAGCATGGGAGACCAATTT | + |
|
Preference number: 4 (lower is better) Translates to: CLGNFGASQNEQICKFQVWFRFW*SMGDQF Trigger: AAATTGGTCTCCCATGCTCCACCAAAAACGAAACCA...AACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR TCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCAT | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARISIRP*GFSSNH Trigger: ATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAAT...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGAAGGTGGGTACATGGTTaGCTTTTTCTGGATGTACAT | + |
|
Preference number: 4 (lower is better) Translates to: FQVSCYVYWRASHYNLLRRWVHG*LFLDVH Trigger: ATGTACATCCAGAAAAAGCCAACCATGTACCCACCT...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGACGGATCCTGTGCACTTaGCTATCACTTTATCAATGC | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARRILCT*LSLYQC Trigger: GCATTGATAAAGTGATAGCCAAGTGCACAGGATCCG...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | GCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTTTGAATCTCTCCTTATaGAACATGGTTTCTCGGCTA | + |
|
Preference number: 4 (lower is better) Translates to: ALGILGLARMNRFVNFKFLNLSL*NMVSRL Trigger: TAGCCGAGAAACCATGTTCCATAAGGAGAGATTCAA...AAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR GCA 90 bp | CTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCACTATCACTTTATCAATaGACTTCTTGTGAATCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGNFGASQNEQICKFQVSLSLYQ*TSCESL Trigger: CAGCGATTCACAAGAAGTGCATTGATAAAGTGATAG...TGAAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAAGATTTTCCTTGGTCTaGAATGTGCAGAACATGTGT | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARRFSLV*NVQNMC Trigger: ACACATGTTCTGCACATTCCAGACCAAGGAAAATCT...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGAAATTTGTGGCAACTTTaGATGTGGTACATTAAGTCG | + |
|
Preference number: 4 (lower is better) Translates to: FQVSCYVYWRASHYNLLRNLWQL*MWYIKS Trigger: CGACTTAATGTACCACATCCAAAGTTGCCACAAATT...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | CTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCAGAAAGATCAAATTTGTaGCAACTTTGGATGTGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LGNFGASQNEQICKFQVSERSNL*QLWMWY Trigger: GTACCACATCCAAAGTTGCCACAAATTTGATCTTTC...TGAAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CCA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGATCAGCCATTAGCTTCTaGTTTATACCACAAAGATTG | + |
|
Preference number: 4 (lower is better) Translates to: TYPRYHHNISSTYINIARSAISF*FIPQRL Trigger: CAATCTTTGTGGTATAAACCAGAAGCTAATGGCTGA...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| 3UTR CAA 72 bp | TTGCCATCAAATCACTGGGAACAACGTGATAAGGGATaGGTTTTCTTTATCTTAGAAGAGTCATGCATTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LPSNHWEQRDKG*VFFILEESCIL Trigger: TAAAATGCATGACTCTTCTAAGATAAAGAAAACCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS TCA 90 bp | CCTGCGCATGCTCACTTCGGGTTCAGGAGGACCGGCCGATTTATTTaGCCCATCCAAAGGGGAATCCCAGGAAATGCCCTGGGGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: PAHAHFGFRRTGRFI*PIQRGIPGNALGFS Trigger: AGAGAACCCCAGGGCATTTCCTGGGATTCCCCTTTGGATGGGTCAAATAAATCGGCCGGTCCTCCTGAACCCGAAGTGAGCATGCGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS TCA 90 bp | CTTGCGGCATCTCTCCGCCAGGGAGTAGAGTTCCACGGTTGTTTCTaGGATGAGGTCTACATTCTTGCCCTTCACGATGATCTGCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LAASLRQGVEFHGCF*DEVYILALHDDLHH Trigger: GTGATGCAGATCATCGTGAAGGGCAAGAATGTAGACCTCATCTCAGAAACAACCGTGGAACTCTACTCCCTGGCGGAGAGATGCCGCAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | CTCTTTTCCCAGGTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTTaGTGGAGCATGGGAGACCAATTTCAACTGGGCCTTCTCGGAAGA | + |
|
Preference number: 5 (lower is better) Translates to: LFSQVLVRMVAWFRF*WSMGDQFQLGLLGR Trigger: TCTTCCGAGAAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTGGGAAAAGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS GCA 90 bp | CTTGAGGTTTCAGCTCTAACCATATTTCTGTCCGCCCATTGTTCTTaGGGCATCTCTCCGCCAGGGAGTAGAGTTCCACGGTTGTTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LEVSALTIFLSAHCS*GISPPGSRVPRLFL Trigger: CAGAAACAACCGTGGAACTCTACTCCCTGGCGGAGAGATGCCGCAAGAACAATGGGCGGACAGAAATATGGTTAGAGCTGAAACCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | TTCTTGCCCTTCACGATGATCTGCATCACCCTTCCCTTGTTAATGTaGGCGTCAAAGGTGCTGTCCCAAGGTGGGTACATGGTTGGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: FLPFTMICITLPLLM*ASKVLSQGGYMVGF Trigger: AAAGCCAACCATGTACCCACCTTGGGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | TTTTCCCAGGTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTTGGTaGAGCATGGGAGACCAATTTCAACTGGGCCTTCTCGGAAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: FSQVLVRMVAWFRFW*SMGDQFQLGLLGRC Trigger: ACATCTTCCGAGAAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTGGGAAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 90 bp | TTCCTTTCAAGCTCTTCCCAGTTGATCTCTCGAAACAAAGGATGCTaGCGGATGTCTCCTCTCACTCCCAGCCTCTTCTCAGGTTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: FLSSSSQLISRNKGC*RMSPLTPSLFSGSL Trigger: GAGAGAACCTGAGAAGAGGCTGGGAGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTGAAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS-3UTR CAA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGCTCTCCCTGACAAGCTaGGCAGGTCCCACAGTCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QKCYLNQFPERRQIPSSLLSLTS*AGPTVK Trigger: TTTGACTGTGGGACCTGCCAAGCTTGTCAGGGAGAG...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | TGCTCAGAGCTTCCCCTTTCCCTCCCTTCTGTCATCGACATTTCCACAGACATGTGCATCACCCTTCCCTaGTTAATGTGGGCGTCAAAG | + |
|
Preference number: 5 (lower is better) Translates to: CSELPLSLPSVIDISTDMCITLP*LMWASK Trigger: CTTTGACGCCCACATTAACAAGGGAAGGGTGATGCA...CATGTCTGTGGAAATGTCGATGACAGAAGGGAGGGAAAGGGGAAGCTCTGAGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | CCACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCAGAGCAAAATGTGGGTaGAGGGAAAAAGGTGGCCGT | + |
|
Preference number: 5 (lower is better) Translates to: PPPEVLLEPVPREKANPFRAKCG*REKGGR Trigger: ACGGCCACCTTTTTCCCTCAACCCACATTTTGCTCT...GAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTGG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS TCA 90 bp | CACTTGACATGGTGGACTTTGGCCTGTTTGATGGCTCCTCGGCGCTaGTGCAGTGCAAAGAATCCTTCATTCTCAAACTCACTCATGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HLTWWTLACLMAPRR*CSAKNPSFSNSLMS Trigger: GGACATGAGTGAGTTTGAGAATGAAGGATTCTTTGCACTGCATCAGCGCCGAGGAGCCATCAAACAGGCCAAAGTCCACCATGTCAAGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 90 bp | TCTTTCCTTTCAAGCTCTTCCCAGTTGATCTCTCGAAACAAAGGATaGTGGCGGATGTCTCCTCTCACTCCCAGCCTCTTCTCAGGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFLSSSSQLISRNKG*WRMSPLTPSLFSGS Trigger: AGAACCTGAGAAGAGGCTGGGAGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTGAAAGGAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | CACCCTTCCCTTGTTAATGTGGGCGTCAAAGGTGCTGTCCCAAGGTaGGTACATGGTTGGCTTTTTCTGGATGTACATCTGCCCATTTTC | + |
|
Preference number: 5 (lower is better) Translates to: HPSLVNVGVKGAVPR*VHGWLFLDVHLPIF Trigger: GAAAATGGGCAGATGTACATCCAGAAAAAGCCAACCATGTACCCACCTTGGGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 90 bp | TGGTTTATACCACAAAGATTGGCAACCTTTGTCTGGCATCGGTGGTaGACGTTCATGCCACATGCATCACATTTGAGTCCTTGCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: WFIPQRLATFVWHRW*TFMPHASHLSPCLA Trigger: GGCGAGGCAAGGACTCAAATGTGATGCATGTGGCATGAACGTCCACCACCGATGCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | CCTTCTCGGAAGATGTGTTCTGAATCTCGTAAGGAGCGAGCCTGTTaGGTGCTTTCAATCATCGCTAGTGCTTCAGCCATTAGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: PSRKMCSESRKERAC*VLSIIASASAISFW Trigger: CCAGAAGCTAATGGCTGAAGCACTAGCGATGATTGAAAGCACCCAACAGGCTCGCTCCTTACGAGATTCAGAACACATCTTCCGAGAAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 90 bp | GTCTCCATCCCTGGGTTAATGAAGGAAAAGTTGCTGAACATGTTCTaGTCCATGCTGTTGATGAGTGCTCTGTCGGCGAATGATAGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSIPGLMKEKLLNMF*SMLLMSALSANDSR Trigger: CCGGCTATCATTCGCCGACAGAGCACTCATCAACAGCATGGACCAGAACATGTTCAGCAACTTTTCCTTCATTAACCCAGGGATGGAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTAATGGTTTCTCGGCTATaGATTGCGGATCCTGTGCAC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLMVSRL*IADPVH Trigger: GTGCACAGGATCCGCAATCAATAGCCGAGAAACCAT...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | CCCTCCCTTCTGTCATCGACATTTCCACAGACATGCACACATCAACGTGGCTTATCTGCCAGGAAGACCTaGCCAAAACTTCCTTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: PSLLSSTFPQTCTHQRGLSARKT*PKLPFP Trigger: GGGAAAAGGAAGTTTTGGCAAGGTCTTCCTGGCAGA...TAAGCCACGTTGATGTGTGCATGTCTGTGGAAATGTCGATGACAGAAGGGAGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS GCA 90 bp | GTTGTTTCTGAGATGAGGTCTACATTCTTGCCCTTCACGATGATCTaGATCACCCTTCCCTTGTTAATGTGGGCGTCAAAGGTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: VVSEMRSTFLPFTMI*ITLPLLMWASKVLS Trigger: GGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAATGTAGACCTCATCTCAGAAACAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | CCACCCCCAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCAAGGTGGGTACATGGTaGGCTTTTTCTGGATGTACA | + |
|
Preference number: 5 (lower is better) Translates to: PPPEVLLEPVPREKANPFKVGTW*AFSGCT Trigger: TGTACATCCAGAAAAAGCCAACCATGTACCCACCTT...GAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTGGGGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CAA 90 bp | GGCGTGGTTTGTGCTGTAGGTAACAAGTCACACAAGGAGCTCAGCAGTCCTCCCTTTATACCACAAAGATaGGCAACCTTTGTCTGGCAT | + |
|
Preference number: 5 (lower is better) Translates to: GVVCAVGNKSHKELSSPPFIPQR*ATFVWH Trigger: ATGCCAGACAAAGGTTGCCAATCTTTGTGGTATAAA...GGGAGGACTGCTGAGCTCCTTGTGTGACTTGTTACCTACAGCACAAACCACGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS GCA 90 bp | CTCGGAAGATGTGTTCTGAATCTCGTAAGGAGCGAGCCTGTTGGGTaGTTTCAATCATCGCTAGTGCTTCAGCCATTAGCTTCTGGTTTA | + |
|
Preference number: 5 (lower is better) Translates to: LGRCVLNLVRSEPVG*FQSSLVLQPLASGL Trigger: TAAACCAGAAGCTAATGGCTGAAGCACTAGCGATGATTGAAAGCACCCAACAGGCTCGCTCCTTACGAGATTCAGAACACATCTTCCGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CCA 90 bp | TTCTGGTTTATACCACAAAGATTGGCAACCTTTGTCTGGCATCGGTaGTGGACGTTCATGCCACATGCATCACATTTGAGTCCTTGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: FWFIPQRLATFVWHR*WTFMPHASHLSPCL Trigger: GAGGCAAGGACTCAAATGTGATGCATGTGGCATGAACGTCCACCACCGATGCCAGACAAAGGTTGCCAATCTTTGTGGTATAAACCAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | CAGAAGTGTTACTTGAACCAGTTCCCAGAGAGAAGGCAAATCCCTTCCAGTCTGGCGGATCCTGTGCACTaGGCTATCACTTTATCAATG | + |
|
Preference number: 5 (lower is better) Translates to: QKCYLNQFPERRQIPSSLADPVH*AITLSM Trigger: CATTGATAAAGTGATAGCCAAGTGCACAGGATCCGC...CAGACTGGAAGGGATTTGCCTTCTCTCTGGGAACTGGTTCAAGTAACACTTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS CCA 90 bp | GCGTCAAAGGTGCTGTCCCAAGGTGGGTACATGGTTGGCTTTTTCTaGATGTACATCTGCCCATTTTCTGATTCCACATACTCTTTGACA | + |
|
Preference number: 5 (lower is better) Translates to: ASKVLSQGGYMVGFF*MYICPFSDSTYSLT Trigger: TGTCAAAGAGTATGTGGAATCAGAAAATGGGCAGATGTACATCCAGAAAAAGCCAACCATGTACCCACCTTGGGACAGCACCTTTGACGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | TGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGGGAACCAATTAAGTCGCCTCCATaGAGATACTCCATCACGAAA | + |
|
Preference number: 5 (lower is better) Translates to: CLGQEQNCISNLSQHREPIKSPP*RYSITK Trigger: TTTCGTGATGGAGTATCTCAATGGAGGCGACTTAAT...TGGTTCCCGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGCCTAGCATGTTCTCTTaGCACATCCCAAAGTCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGLICHQITGNNVIRDWPSMFS*HIPKSA Trigger: AGCAGACTTTGGGATGTGCAAAGAGAACATGCTAGG...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | GCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTTTCTGGTCCATGCTGTaGATGAGTGCTCTGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: ALGILGLARMNRFVNFKFFWSML*MSALSA Trigger: CGCCGACAGAGCACTCATCAACAGCATGGACCAGAA...AAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS TCA 90 bp | CCCTGTAGACAATTCCTTTGGAATGAAGGAACTGCAGACCAAGGATaGCCTCAGCAGCATAAAACGTGGCTCTGGAAAGATCAAATTTGT | + |
|
Preference number: 5 (lower is better) Translates to: PCRQFLWNEGTADQG*PQQHKTWLWKDQIC Trigger: ACAAATTTGATCTTTCCAGAGCCACGTTTTATGCTGCTGAGGTCATCCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATTGTCTACAGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | CAGCTGTTGTCTAGGGCAAGAGCAGAACTGCATTTCGAATCTTTCACAGCATCGTTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGC | + |
|
Preference number: 5 (lower is better) Translates to: QLLSRARAELHFESFTASFPESI*HSLAFG Trigger: GCCGAATGCTAATGAATGCAAGATACTTTCTGGAAA...CGATGCTGTGAAAGATTCGAAATGCAGTTCTGCTCTTGCCCTAGACAACAGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGACCCTCTTTTCCACCATaGTACACTCGACGTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRPSFPP*YTRRHH Trigger: ATGATGACGTCGAGTGTACAATGGTGGAAAAGAGGG...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAGGCCTGGTTTCGTTTTaGGTGGAGCATGGGAGACCA | + |
|
Preference number: 5 (lower is better) Translates to: TYPRYHHNISSTYINIARGLVSF*VEHGRP Trigger: TGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCC...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGCTGGAAAGATCAAATTaGTGGCAACTTTGGATGTGG | + |
|
Preference number: 5 (lower is better) Translates to: KEGLICHQITGNNVIRDWLERSN*WQLWMW Trigger: CCACATCCAAAGTTGCCACAAATTTGATCTTTCCAG...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGATCAAGCTCTTCCCAGTaGATCTCTCGAAACAAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRSSSSQ*ISRNKG Trigger: TCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTGA...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS TCA 90 bp | TCACTCATTTCCAGAAAGTATCTTGCATTCATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCATATTTCTGTCCGCCCATTGTTCTTG | + |
|
Preference number: 5 (lower is better) Translates to: SLISRKYLAFISIRP*GFSSNHISVRPLFL Trigger: CAAGAACAATGGGCGGACAGAAATATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGAAATGAGTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 90 bp | GATCTTGAATCTCTCCTTATGGAACATGGTTTCTCGGCTATTGATTaGGGATCCTGTGCACTTGGCTATCACTTTATCAATGCACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: DLESLLMEHGFSAID*GSCALGYHFINALL Trigger: AAGAAGTGCATTGATAAAGTGATAGCCAAGTGCACAGGATCCGCAATCAATAGCCGAGAAACCATGTTCCATAAGGAGAGATTCAAGATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS-3UTR CAA 90 bp | AAGGAGGGACTTATTTGCCATCAAATCACTGGGAACAACGTGATAAGGGATTGGCCAAAGTCTGCTATTTaGATATGTCCATCTCTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: KEGLICHQITGNNVIRDWPKSAI*ICPSLS Trigger: AGACAGAGATGGACATATCAAAATAGCAGACTTTGG...CCAATCCCTTATCACGTTGTTCCCAGTGATTTGATGGCAAATAAGTCCCTCCTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | TACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGTTGACATGGTGGACTTaGGCCTGTTTGATGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: YISTLSSQHLINIYKHRTLTWWT*ACLMAP Trigger: AGGAGCCATCAAACAGGCCAAAGTCCACCATGTCAA...CGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGTA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | GCCTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTTGTGGCATGTCGATCTaGAATCTCTCCTTATGGAAC | + |
|
Preference number: 5 (lower is better) Translates to: ALGILGLARMNRFVNFKFCGMSI*NLSLWN Trigger: GTTCCATAAGGAGAGATTCAAGATCGACATGCCACA...AAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAGGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | AGCTGTAAACCACCCTGCCCTTGTTGGTTATACTTTCCTTCTGTGTGTATAAGATTAATGAAGGAAAAGTaGCTGAACATGTTCTGGTCC | + |
|
Preference number: 5 (lower is better) Translates to: SCKPPCPCWLYFPSVCIRLMKEK*LNMFWS Trigger: GGACCAGAACATGTTCAGCAACTTTTCCTTCATTAA...TCTTATACACACAGAAGGAAAGTATAACCAACAAGGGCAGGGTGGTTTACAGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS-3UTR CAA 90 bp | ACATATCCACGTTATCATCACAACATCTCATCAACATATATAAACATCGCACGAATGAGGTCTACATTCTaGCCCTTCACGATGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TYPRYHHNISSTYINIARMRSTF*PFTMIC Trigger: GCAGATCATCGTGAAGGGCAAGAATGTAGACCTCAT...TCGTGCGATGTTTATATATGTTGATGAGATGTTGTGATGATAACGTGGATATGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CAA 90 bp | CTTGGGAATTTTGGGGCTAGCCAGAATGAACAGATTTGTAAATTTCAAGTTTCAACTCACTCATGTCCTTaGTGTCACTCATTTCCAGAA | + |
|
Preference number: 5 (lower is better) Translates to: LGNFGASQNEQICKFQVSTHSCP*CHSFPE Trigger: TTCTGGAAATGAGTGACACAAAGGACATGAGTGAGT...TGAAACTTGAAATTTACAAATCTGTTCATTCTGGCTAGCCCCAAAATTCCCAAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CAA 90 bp | AGAGTTAATAATGATCTAACTTCAAGGGCTGCTGTGAGAGATTCCAGGAGATATAATTCCTTGTCGAAATaGCTACAGTCATATGGTGAT | + |
|
Preference number: 5 (lower is better) Translates to: RVNNDLTSRAAVRDSRRYNSLSK*LQSYGD Trigger: ATCACCATATGACTGTAGCAATTTCGACAAGGAATT...ATATCTCCTGGAATCTCTCACAGCAGCCCTTGAAGTTAGATCATTATTAACTCT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS-3UTR CAA 90 bp | TTTCAAGTTTCATGCTATGTTTATTGGAGAGCTTCCCATTACAATCTGCTCAGATCACTTAGGAATTCCTaGTCGAAATTGCTACAGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FQVSCYVYWRASHYNLLRSLRNS*SKLLQS Trigger: TGACTGTAGCAATTTCGACAAGGAATTCCTAAGTGA...TCTGAGCAGATTGTAATGGGAAGCTCTCCAATAAACATAGCATGAAACTTGAAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS CCA 72 bp | CGAGCCACCTCGGGTAGAAGGGGTTGTCCATGCGGATaGAGTGGAACAGCTCCTCCTCGTCCTGCCCGTGGA | + |
|
Preference number: 6 (lower is better) Translates to: RATSGRRGCPCG*SGTAPPRPARG Trigger: TCCACGGGCAGGACGAGGAGGAGCTGTTCCACTCCATCCGCATGGACAACCCCTTCTACCCGAGGTGGCTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
||
| CDS TCA 72 bp | ATCGGTGGTGGACGTTCATGCCACATGCATCACATTTaGGTCCTTGCCTCGCCAGCCCCCAGAGCAGGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: IGGGRSCHMHHI*VLASPAPRAGY Trigger: GTACCCTGCTCTGGGGGCTGGCGAGGCAAGGACTCAAATGTGATGCATGTGGCATGAACGTCCACCACCGAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS CAA 90 bp | TCCTGCGCATGCTCACTTCGGGTTCAGGAGGACCGGCCGATTTATTaGACCCATCCAAAGGGGAATCCCAGGAAATGCCCTGGGGTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: SCACSLRVQEDRPIY*THPKGNPRKCPGVL Trigger: GAGAACCCCAGGGCATTTCCTGGGATTCCCCTTTGGATGGGTCAAATAAATCGGCCGGTCCTCCTGAACCCGAAGTGAGCATGCGCAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS TCA 72 bp | GCTCACTTCGGGTTCAGGAGGACCGGCCGATTTATTTaGCCCATCCAAAGGGGAATCCCAGGAAATGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: AHFGFRRTGRFI*PIQRGIPGNAL Trigger: CAGGGCATTTCCTGGGATTCCCCTTTGGATGGGTCAAATAAATCGGCCGGTCCTCCTGAACCCGAAGTGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
||
| CDS GCA 72 bp | ATACTCTTTGACAAGCACAGCGCAGTAGGGGTTCACTaGCTCTCCCTGACAAGCTTGGCAGGTCCCACAGTC | + |
|
Preference number: 6 (lower is better) Translates to: ILFDKHSAVGVH*LSLTSLAGPTV Trigger: GACTGTGGGACCTGCCAAGCTTGTCAGGGAGAGGCAGTGAACCCCTACTGCGCTGTGCTTGTCAAAGAGTAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 72 bp | TCAGCTCTAACCATATTTCTGTCCGCCCATTGTTCTTaGGGCATCTCTCCGCCAGGGAGTAGAGTTCCACGG | + |
|
Preference number: 6 (lower is better) Translates to: SALTIFLSAHCS*GISPPGSRVPR Trigger: CCGTGGAACTCTACTCCCTGGCGGAGAGATGCCGCAAGAACAATGGGCGGACAGAAATATGGTTAGAGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | CAGGTTCTCTCACAAAAAGCTTCACTAGAAGGTCCTTaGCCTCCCTTTCGAGCCACCTCGGGTAGAAGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: QVLSQKASLEGP*PPFRATSGRRG Trigger: ACCCCTTCTACCCGAGGTGGCTCGAAAGGGAGGCCAAGGACCTTCTAGTGAAGCTTTTTGTGAGAGAACCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS CAA 72 bp | CCAGGTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTaGGTGGAGCATGGGAGACCAATTTCAACTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: PGVGTHGGLVSF*VEHGRPISTGP Trigger: AGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | TGCTCACTTCGGGTTCAGGAGGACCGGCCGATTTATTaGACCCATCCAAAGGGGAATCCCAGGAAATGCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CSLRVQEDRPIY*THPKGNPRKCP Trigger: AGGGCATTTCCTGGGATTCCCCTTTGGATGGGTCAAATAAATCGGCCGGTCCTCCTGAACCCGAAGTGAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 72 bp | TCAAGCTCTTCCCAGTTGATCTCTCGAAACAAAGGATaGTGGCGGATGTCTCCTCTCACTCCCAGCCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSSSQLISRNKG*WRMSPLTPSLF Trigger: GAAGAGGCTGGGAGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | GTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTTGGTaGAGCATGGGAGACCAATTTCAACTGGGCCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: VLVRMVAWFRFW*SMGDQFQLGLL Trigger: GAGAAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | CAGGTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTTaGTGGAGCATGGGAGACCAATTTCAACTGGGCCTT | + |
|
Preference number: 6 (lower is better) Translates to: QVLVRMVAWFRF*WSMGDQFQLGL Trigger: AAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | AGCTCTTCCCAGTTGATCTCTCGAAACAAAGGATGCTaGCGGATGTCTCCTCTCACTCCCAGCCTCTTCTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSSQLISRNKGC*RMSPLTPSLFS Trigger: TGAGAAGAGGCTGGGAGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | TCTCTTTTCCCAGGTGTTGGTACGCATGGTGGCCTGGTTTCGTTTTaGGTGGAGCATGGGAGACCAATTTCAACTGGGCCTTCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: SLFPGVGTHGGLVSF*VEHGRPISTGPSRK Trigger: CTTCCGAGAAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTGGGAAAAGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | AGGTCTACATTCTTGCCCTTCACGATGATCTGCATCACCCTTCCCTaGTTAATGTGGGCGTCAAAGGTGCTGTCCCAAGGTGGGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: RSTFLPFTMICITLP*LMWASKVLSQGGYM Trigger: CATGTACCCACCTTGGGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAATGTAGACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | TTCACGATGATCTGCATCACCCTTCCCTTGTTAATGTaGGCGTCAAAGGTGCTGTCCCAAGGTGGGTACATG | + |
|
Preference number: 6 (lower is better) Translates to: FTMICITLPLLM*ASKVLSQGGYM Trigger: CATGTACCCACCTTGGGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | TACGCATGGTGGCCTGGTTTCGTTTTTGGTGGAGCATaGGAGACCAATTTCAACTGGGCCTTCTCGGAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: YAWWPGFVFGGA*ETNFNWAFSED Trigger: ATCTTCCGAGAAGGCCCAGTTGAAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | GGGCGTCAAAGGTGCTGTCCCAAGGTGGGTACATGGTaGGCTTTTTCTGGATGTACATCTGCCCATTTTCTG | + |
|
Preference number: 6 (lower is better) Translates to: GRQRCCPKVGTW*AFSGCTSAHFL Trigger: CAGAAAATGGGCAGATGTACATCCAGAAAAAGCCAACCATGTACCCACCTTGGGACAGCACCTTTGACGCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | TTCTTGCCCTTCACGATGATCTGCATCACCCTTCCCTaGTTAATGTGGGCGTCAAAGGTGCTGTCCCAAGGT | + |
|
Preference number: 6 (lower is better) Translates to: FLPFTMICITLP*LMWASKVLSQG Trigger: ACCTTGGGACAGCACCTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | GGTCTGAAGGGTGGGTCAATCTCTTTCCTTTCAAGCTCTTCCCAGTaGATCTCTCGAAACAAAGGATGCTGGCGGATGTCTCCTCTCACT | + |
|
Preference number: 6 (lower is better) Translates to: GLKGGSISFLSSSSQ*ISRNKGCWRMSPLT Trigger: AGTGAGAGGAGACATCCGCCAGCATCCTTTGTTTCGAGAGATCAACTGGGAAGAGCTTGAAAGGAAAGAGATTGACCCACCCTTCAGACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS TCA 72 bp | TGGTGGACTTTGGCCTGTTTGATGGCTCCTCGGCGCTaGTGCAGTGCAAAGAATCCTTCATTCTCAAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: WWTLACLMAPRR*CSAKNPSFSNS Trigger: TGAGTTTGAGAATGAAGGATTCTTTGCACTGCATCAGCGCCGAGGAGCCATCAAACAGGCCAAAGTCCACCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | CCACAAAGATTGGCAACCTTTGTCTGGCATCGGTGGTaGACGTTCATGCCACATGCATCACATTTGAGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: PQRLATFVWHRW*TFMPHASHLSP Trigger: AGGACTCAAATGTGATGCATGTGGCATGAACGTCCACCACCGATGCCAGACAAAGGTTGCCAATCTTTGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | GTTCTCTTTTCCCAGGTGTTGGTACGCATGGTGGCCTaGTTTCGTTTTTGGTGGAGCATGGGAGACCAATTT | + |
|
Preference number: 6 (lower is better) Translates to: VLFSQVLVRMVA*FRFWWSMGDQF Trigger: AAATTGGTCTCCCATGCTCCACCAAAAACGAAACCAGGCCACCATGCGTACCAACACCTGGGAAAAGAGAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | AAGGAAAAGTTGCTGAACATGTTCTGGTCCATGCTGTaGATGAGTGCTCTGTCGGCGAATGATAGCCGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: KEKLLNMFWSML*MSALSANDSRG Trigger: ACCCCGGCTATCATTCGCCGACAGAGCACTCATCAACAGCATGGACCAGAACATGTTCAGCAACTTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 72 bp | GAGATGAGGTCTACATTCTTGCCCTTCACGATGATCTaGATCACCCTTCCCTTGTTAATGTGGGCGTCAAAG | + |
|
Preference number: 6 (lower is better) Translates to: EMRSTFLPFTMI*ITLPLLMWASK Trigger: CTTTGACGCCCACATTAACAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAATGTAGACCTCATCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS GCA 72 bp | GTCTGGAATGTGCAGAACATGTGTGTTAGAAATGGATaGTCCCATGCCAAGGACAGAACCCTCTTTTCCACC | + |
|
Preference number: 6 (lower is better) Translates to: VWNVQNMCVRNG*SHAKDRTLFST Trigger: GGTGGAAAAGAGGGTTCTGTCCTTGGCATGGGAGCATCCATTTCTAACACACATGTTCTGCACATTCCAGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | CTTGTTAATGTGGGCGTCAAAGGTGCTGTCCCAAGGTaGGTACATGGTTGGCTTTTTCTGGATGTACATCTG | + |
|
Preference number: 6 (lower is better) Translates to: LVNVGVKGAVPR*VHGWLFLDVHL Trigger: CAGATGTACATCCAGAAAAAGCCAACCATGTACCCACCTTGGGACAGCACCTTTGACGCCCACATTAACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | AGTTCCACGGTTGTTTCTGAGATGAGGTCTACATTCTaGCCCTTCACGATGATCTGCATCACCCTTCCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: SSTVVSEMRSTF*PFTMICITLPL Trigger: CAAGGGAAGGGTGATGCAGATCATCGTGAAGGGCAAGAATGTAGACCTCATCTCAGAAACAACCGTGGAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | CCAGACAAATTCATGGCAGACAGAGCAAAATGTGGGTaGAGGGAAAAAGGTGGCCGTGAACTCGTGACACTT | + |
|
Preference number: 6 (lower is better) Translates to: PDKFMADRAKCG*REKGGRELVTL Trigger: AAGTGTCACGAGTTCACGGCCACCTTTTTCCCTCAACCCACATTTTGCTCTGTCTGCCATGAATTTGTCTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | GGGTTAATGAAGGAAAAGTTGCTGAACATGTTCTGGTCCATGCTGTaGATGAGTGCTCTGTCGGCGAATGATAGCCGGGGTTTCTCACTT | + |
|
Preference number: 6 (lower is better) Translates to: GLMKEKLLNMFWSML*MSALSANDSRGFSL Trigger: AAGTGAGAAACCCCGGCTATCATTCGCCGACAGAGCACTCATCAACAGCATGGACCAGAACATGTTCAGCAACTTTTCCTTCATTAACCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | CAGGAGCAAATGAGAGTCTCCATCCCTGGGTTAATGAAGGAAAAGTaGCTGAACATGTTCTGGTCCATGCTGTTGATGAGTGCTCTGTCG | + |
|
Preference number: 6 (lower is better) Translates to: QEQMRVSIPGLMKEK*LNMFWSMLLMSALS Trigger: CGACAGAGCACTCATCAACAGCATGGACCAGAACATGTTCAGCAACTTTTCCTTCATTAACCCAGGGATGGAGACTCTCATTTGCTCCTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000028118.9 |
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| CDS GCA 72 bp | TTGCGGATCCTGTGCACTTGGCTATCACTTTATCAATaGACTTCTTGTGAATCGCTGCATTACACTGTCGGC | + |
|
Preference number: 6 (lower is better) Translates to: LRILCTWLSLYQ*TSCESLHYTVG Trigger: GCCGACAGTGTAATGCAGCGATTCACAAGAAGTGCATTGATAAAGTGATAGCCAAGTGCACAGGATCCGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | GTGCTGTCCCAAGGTGGGTACATGGTTGGCTTTTTCTaGATGTACATCTGCCCATTTTCTGATTCCACATAC | + |
|
Preference number: 6 (lower is better) Translates to: VLSQGGYMVGFF*MYICPFSDSTY Trigger: GTATGTGGAATCAGAAAATGGGCAGATGTACATCCAGAAAAAGCCAACCATGTACCCACCTTGGGACAGCAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | AAGATGTGTTCTGAATCTCGTAAGGAGCGAGCCTGTTaGGTGCTTTCAATCATCGCTAGTGCTTCAGCCATT | + |
|
Preference number: 6 (lower is better) Translates to: KMCSESRKERAC*VLSIIASASAI Trigger: AATGGCTGAAGCACTAGCGATGATTGAAAGCACCCAACAGGCTCGCTCCTTACGAGATTCAGAACACATCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | GCGAATGATAGCCGGGGTTTCTCACTTAGGAATTCCTTGTCGAAATaGCTACAGTCATATGGTGATTTCACTTTTGGTCTGAAGGGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ANDSRGFSLRNSLSK*LQSYGDFTFGLKGG Trigger: CCCACCCTTCAGACCAAAAGTGAAATCACCATATGACTGTAGCAATTTCGACAAGGAATTCCTAAGTGAGAAACCCCGGCTATCATTCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | GCTCTGTCGGCGAATGATAGCCGGGGTTTCTCACTTAGGAATTCCTaGTCGAAATTGCTACAGTCATATGGTGATTTCACTTTTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: ALSANDSRGFSLRNS*SKLLQSYGDFTFGL Trigger: CAGACCAAAAGTGAAATCACCATATGACTGTAGCAATTTCGACAAGGAATTCCTAAGTGAGAAACCCCGGCTATCATTCGCCGACAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS TCA 72 bp | CAATTCCTTTGGAATGAAGGAACTGCAGACCAAGGATaGCCTCAGCAGCATAAAACGTGGCTCTGGAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: QFLWNEGTADQG*PQQHKTWLWKD Trigger: ATCTTTCCAGAGCCACGTTTTATGCTGCTGAGGTCATCCTTGGTCTGCAGTTCCTTCATTCCAAAGGAATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS TCA 72 bp | TCCAGAAAGTATCTTGCATTCATTAGCATTCGGCCTTaGGGTTTCAGCTCTAACCATATTTCTGTCCGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: SRKYLAFISIRP*GFSSNHISVRP Trigger: TGGGCGGACAGAAATATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS TCA 72 bp | TGCCAAAACTTCCTTTTCCCAACATCTTGTGCAGGATaGAGTCATCGATCTTCAGTTTCAGCTGCAGTGAAG | + |
|
Preference number: 6 (lower is better) Translates to: CQNFLFPTSCAG*SHRSSVSAAVK Trigger: CTTCACTGCAGCTGAAACTGAAGATCGATGACTTCATCCTGCACAAGATGTTGGGAAAAGGAAGTTTTGGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | ATGAGAGTCTCCATCCCTGGGTTAATGAAGGAAAAGTaGCTGAACATGTTCTGGTCCATGCTGTTGATGAGT | + |
|
Preference number: 6 (lower is better) Translates to: MRVSIPGLMKEK*LNMFWSMLLMS Trigger: ACTCATCAACAGCATGGACCAGAACATGTTCAGCAACTTTTCCTTCATTAACCCAGGGATGGAGACTCTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | AACGTGGCTCTGGAAAGATCAAATTTGTGGCAACTTTaGATGTGGTACATTAAGTCGCCTCCATTGAGATAC | + |
|
Preference number: 6 (lower is better) Translates to: NVALERSNLWQL*MWYIKSPPLRY Trigger: GTATCTCAATGGAGGCGACTTAATGTACCACATCCAAAGTTGCCACAAATTTGATCTTTCCAGAGCCACGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | TTGAATCTCTCCTTATGGAACATGGTTTCTCGGCTATaGATTGCGGATCCTGTGCACTTGGCTATCACTTTA | + |
|
Preference number: 6 (lower is better) Translates to: LNLSLWNMVSRL*IADPVHLAITL Trigger: TAAAGTGATAGCCAAGTGCACAGGATCCGCAATCAATAGCCGAGAAACCATGTTCCATAAGGAGAGATTCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | AGCCGGGGTTTCTCACTTAGGAATTCCTTGTCGAAATaGCTACAGTCATATGGTGATTTCACTTTTGGTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SRGFSLRNSLSK*LQSYGDFTFGL Trigger: CAGACCAAAAGTGAAATCACCATATGACTGTAGCAATTTCGACAAGGAATTCCTAAGTGAGAAACCCCGGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | GCGAATGATAGCCGGGGTTTCTCACTTAGGAATTCCTaGTCGAAATTGCTACAGTCATATGGTGATTTCACT | + |
|
Preference number: 6 (lower is better) Translates to: ANDSRGFSLRNS*SKLLQSYGDFT Trigger: AGTGAAATCACCATATGACTGTAGCAATTTCGACAAGGAATTCCTAAGTGAGAAACCCCGGCTATCATTCGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CCA 72 bp | GGTTGGACTCTTGTAGTTGTAGACTTTGAATCTGTGTaGCATGTCGATCTTGAATCTCTCCTTATGGAACAT | + |
|
Preference number: 6 (lower is better) Translates to: GWTLVVVDFESV*HVDLESLLMEH Trigger: ATGTTCCATAAGGAGAGATTCAAGATCGACATGCCACACAGATTCAAAGTCTACAACTACAAGAGTCCAACC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 72 bp | TCATGTCCTTTGTGTCACTCATTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGCCTTGAGGTTTCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SCPLCHSFPESI*HSLAFGLEVSA Trigger: AGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGAAATGAGTGACACAAAGGACATGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | CAAACTCACTCATGTCCTTTGTGTCACTCATTTCCAGAAAGTATCTaGCATTCATTAGCATTCGGCCTTGAGGTTTCAGCTCTAACCATA | + |
|
Preference number: 6 (lower is better) Translates to: QTHSCPLCHSFPESI*HSLAFGLEVSALTI Trigger: TATGGTTAGAGCTGAAACCTCAAGGCCGAATGCTAATGAATGCAAGATACTTTCTGGAAATGAGTGACACAAAGGACATGAGTGAGTTTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS TCA 72 bp | AATTGCTACAGTCATATGGTGATTTCACTTTTGGTCTaGAGGGTGGGTCAATCTCTTTCCTTTCAAGCTCTT | + |
|
Preference number: 6 (lower is better) Translates to: NCYSHMVISLLV*RVGQSLSFQAL Trigger: AAGAGCTTGAAAGGAAAGAGATTGACCCACCCTTCAGACCAAAAGTGAAATCACCATATGACTGTAGCAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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| CDS CAA 90 bp | GATGCAGTGCAAAGAATCCTTCATTCTCAAACTCACTCATGTCCTTaGTGTCACTCATTTCCAGAAAGTATCTTGCATTCATTAGCATTC | + |
|
Preference number: 6 (lower is better) Translates to: DAVQRILHSQTHSCP*CHSFPESILHSLAF Trigger: GAATGCTAATGAATGCAAGATACTTTCTGGAAATGAGTGACACAAAGGACATGAGTGAGTTTGAGAATGAAGGATTCTTTGCACTGCATC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000028118.9 ENSMUST00000102970.5 |
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