Pregenerated sensors for PRKCB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000052889Ensembl transcript IDs: ENSMUST00000064921.5, ENSMUST00000064989.12, ENSMUST00000143692.8
Found 275 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | AGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGCCATATACTTaGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATATTGC | + |
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Preference number: 1 (lower is better) Translates to: RQRGGIPSRAKQPYT*IQAKLPAWKVEGYC Trigger: GCAATATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR GCA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTaGCAAATGTCATTCTTGAGTAGTTTGGGGGATGAAGGTACCGCT | + |
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Preference number: 1 (lower is better) Translates to: VLWDLARVTMWFQEQ*QMSFLSSLGDEGTA Trigger: AGCGGTACCTTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR TCA 90 bp | CACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTaGAGCCTTACACACAGGCTCGGCAATGGACTCTGCATTCACCTA | + |
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Preference number: 1 (lower is better) Translates to: HHESWKTGIGNRHSA*SLTHRLGNGLCIHL Trigger: TAGGTGAATGCAGAGTCCATTGCCGAGCCTGTGTGTAAGGCTTCAGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR CCA 90 bp | AGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTaGAAGGATATTGCTAGCATTTGGTTCATCCATCCATTTTGTAGG | + |
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Preference number: 1 (lower is better) Translates to: SSHILGFKPSSQPGK*KDIASIWFIHPFCR Trigger: CCTACAAAATGGATGGATGAACCAAATGCTAGCAATATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR CCA 90 bp | ATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTTaGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: MTNSGLVYEKPANSF*SKFMMKSLSVGVSS Trigger: GGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR CCA 90 bp | TTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTaGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAAC | + |
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Preference number: 1 (lower is better) Translates to: LSFDTVGSLDEFLEV*KSVPLSVGNALILN Trigger: GTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR CAA 90 bp | GTGGGAGTCAGTTCCACAGGCTGCCTGGTGAACTCTTTGTCGAAGTaGGAGGTGTCTCGCTTGTCTCTCATGACAGCTGTTGCGCTTGAA | + |
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Preference number: 2 (lower is better) Translates to: VGVSSTGCLVNSLSK*EVSRLSLMTAVALE Trigger: TTCAAGCGCAACAGCTGTCATGAGAGACAAGCGAGACACCTCCAACTTCGACAAAGAGTTCACCAGGCAGCCTGTGGAACTGACTCCCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGTGTAGCCTGGAGGGTTaGGGTAAAGATGGCAGTGCA | + |
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Preference number: 2 (lower is better) Translates to: VLWDLARVTMWFQEQCQMCSLEG*GKDGSA Trigger: TGCACTGCCATCTTTACCCCAACCCTCCAGGCTACA...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR CAA 90 bp | ATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATaGGTAACAGACATTCGGCCTGAAGCCTTACACACAGGCTCGGCA | + |
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Preference number: 2 (lower is better) Translates to: MTDANRGTMNPGRLE*VTDIRPEALHTGSA Trigger: TGCCGAGCCTGTGTGTAAGGCTTCAGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCAT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR TCA 90 bp | TTCCCTCTAGGGCAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGACAGCTGTTGCGCTTaGATGACAGAAATGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: FPLGQSSHILGFKPSSQPDSCCA*MTEMED Trigger: GTCCTCCATTTCTGTCATTCAAGCGCAACAGCTGTC...AGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATGCATTTTCTCTCCCGTaGGGGTCTGTGAGCCGACAT | + |
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Preference number: 2 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDAFSLP*GSVSRH Trigger: ATGTCGGCTCACAGACCCCCACGGGAGAGAAAATGC...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR TCA 90 bp | TTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGGACAGCTGTTGCGCTTaGATGACAGAAATGGAGGAC | + |
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Preference number: 2 (lower is better) Translates to: LVQVHDEEFVSGSQFHRLDSCCA*MTEMED Trigger: GTCCTCCATTTCTGTCATTCAAGCGCAACAGCTGTC...CAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAAAGACATTTGGGTTCTaGAACATGGCCACTCTAGCC | + |
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Preference number: 2 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGKTFGF*NMATLA Trigger: GGCTAGAGTGGCCATGTTTCAGAACCCAAATGTCTT...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR GCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATAGCACCCAAGCTGGTTaGCTTTTGACCCTGAAGTGC | + |
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Preference number: 2 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDSTQAG*LLTLKC Trigger: GCACTTCAGGGTCAAAAGGCAACCAGCTTGGGTGCT...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR TCA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGTGTCGGTTCATTGGATaGGTTTCTGGAAGTCTGGAA | + |
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Preference number: 2 (lower is better) Translates to: LHMTDANRGTMNPGRLELCRFIG*VSGSLE Trigger: TTCCAGACTTCCAGAAACTCATCCAATGAACCGACA...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR GCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGAGCGTGTCTCGATTATaGAGCACTTTCTACATGCCA | + |
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Preference number: 2 (lower is better) Translates to: QSSHILGFKPSSQPGKWKSVSRL*STFYMP Trigger: TGGCATGTAGAAAGTGCTGCATAATCGAGACACGCT...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR CAA 90 bp | GCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTaGAGTAGTTTGGGGGATGAAGGTACCGCTATCAGACATACAGTA | + |
|
Preference number: 2 (lower is better) Translates to: ARVTMWFQEQCQMSF*SSLGDEGTAIRHTV Trigger: TACTGTATGTCTGATAGCGGTACCTTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CCA 90 bp | TCGGTTCATTGGATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGACTCTTTGTCGAAGTTaGAGGTGTCTCGCTTGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SVHWMSFWKSGKVYLYRWTLCRS*RCLACL Trigger: GAGACAAGCGAGACACCTCCAACTTCGACAAAGAGT...CCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCATCCAATGAACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR TCA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAATAATTCCATCTCCTTaGGATGCTCCAAACTACTTG | + |
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Preference number: 2 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGIIPSP*DAPNYL Trigger: CAAGTAGTTTGGAGCATCTCAAGGAGATGGAATTAT...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATTCCCAGCCTGGAAAGTaGAAGGATATTGCTAGCATT | + |
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Preference number: 2 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDSQPGK*KDIASI Trigger: AATGCTAGCAATATCCTTCCACTTTCCAGGCTGGGA...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAGGCACCATGAATCCTaGAAGACTGGAATTGGTAAC | + |
|
Preference number: 2 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSRHHES*KTGIGN Trigger: GTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCT...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGATTAATGACAAACTCTaGGTTAGTATACGAGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LHMTDANRGTMNPGRLELINDKL*VSIREA Trigger: GGCTTCTCGTATACTAACCCAGAGTTTGTCATTAAT...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR CAA 90 bp | AATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTaGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTC | + |
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Preference number: 2 (lower is better) Translates to: NDKLWVSIREASKLI*VQVHDEEFVSGSQF Trigger: GAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | GTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCACAACTTTACACTGTCGGTTCATTaGATGAGTTTCTGGAAGTCT | + |
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Preference number: 2 (lower is better) Translates to: VSSKRHEFTGTAKLTHNFTLSVH*MSFWKS Trigger: AGACTTCCAGAAACTCATCCAATGAACCGACAGTGT...AAAGTTGTGAGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATAGGCACCATGAATCCTaGAAGACTGGAATTGGTAAC | + |
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Preference number: 2 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDRHHES*KTGIGN Trigger: GTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCT...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGGAAGCATTTTGGTATTaGACACAGTTAAGTTTTGAC | + |
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Preference number: 2 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWEAFWY*TQLSFD Trigger: GTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAAGAGTTTCTGGAAGTCTaGAAAAGTGTACCTCTATCG | + |
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Preference number: 2 (lower is better) Translates to: SYQFLNKKFPPRDTNSQEEFLEV*KSVPLS Trigger: CGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR-3UTR CCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTCATTGGATGAGTTTCTaGAAGTCTGGAAAAGTGTAC | + |
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Preference number: 2 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGHWMSF*KSGKVY Trigger: GTACACTTTTCCAGACTTCCAGAAACTCATCCAATG...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR TCA 72 bp | TCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTaGAGCCTTACACACAGGCTCGGCAATGGACTCTGC | + |
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Preference number: 3 (lower is better) Translates to: SWKTGIGNRHSA*SLTHRLGNGLC Trigger: GCAGAGTCCATTGCCGAGCCTGTGTGTAAGGCTTCAGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| 3UTR CCA 72 bp | GGAGGGATTCCCTCTAGGGCAAAGCAGCCATATACTTaGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAA | + |
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Preference number: 3 (lower is better) Translates to: GGIPSRAKQPYT*IQAKLPAWKVE Trigger: TTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAATCCCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR GCA 72 bp | CTCCGAGCGTGTCTCGATTATGCAGCACTTTCTACATaGCACCTGCATAATTCCATCTCCTTGAGATGCTCC | + |
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Preference number: 3 (lower is better) Translates to: LRACLDYAALST*HLHNSISLRCS Trigger: GGAGCATCTCAAGGAGATGGAATTATGCAGGTGGCATGTAGAAAGTGCTGCATAATCGAGACACGCTCGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR TCA 72 bp | CCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTaGGTAGTTTGGGGGATGAAGGTACCGCTATCAGAC | + |
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Preference number: 3 (lower is better) Translates to: PCGSRNSAKCHS*VVWGMKVPLSD Trigger: GTCTGATAGCGGTACCTTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR TCA 72 bp | AATGTAGAATCAGGGTCCTTTGGGACCTGGCTAGAGTaGCCATGTGGTTCCAGGAACAGTGCCAAATGTCAT | + |
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Preference number: 3 (lower is better) Translates to: NVESGSFGTWLE*PCGSRNSAKCH Trigger: ATGACATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGACCCTGATTCTACATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR GCA 72 bp | GACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTaGCAAATGTCATTCTTGAGTAGTTTGGGGGATGAA | + |
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Preference number: 3 (lower is better) Translates to: DLARVTMWFQEQ*QMSFLSSLGDE Trigger: TTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CAA 90 bp | TTCCCTCTAGGGCAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTCATAATTCCATCTCCTaGAGATGCTCCAAACTACTT | + |
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Preference number: 3 (lower is better) Translates to: FPLGQSSHILGFKPSSQPHNSIS*RCSKLL Trigger: AAGTAGTTTGGAGCATCTCAAGGAGATGGAATTATG...AGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| 3UTR-3UTR CAA 90 bp | TTCACCTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTTGGAGGTGTCTCGCTaGTCTCTCATGACAGCTGTT | + |
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Preference number: 3 (lower is better) Translates to: FTYTLMTNSGLVYEKPANLEVSR*SLMTAV Trigger: AACAGCTGTCATGAGAGACAAGCGAGACACCTCCAA...GTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAGGTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR CAA 90 bp | TTCACCTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACAACTCTTTGTCGAAGTaGGAGGTGTCTCGCTTGTCT | + |
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Preference number: 3 (lower is better) Translates to: FTYTLMTNSGLVYEKPANNSLSK*EVSRLS Trigger: AGACAAGCGAGACACCTCCAACTTCGACAAAGAGTT...GTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAGGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR CAA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGTTCATGATGAAGAGTTaGTCAGTGGGAGTCAGTTCC | + |
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Preference number: 3 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWFMMKS*SVGVSS Trigger: GGAACTGACTCCCACTGACAAACTCTTCATCATGAA...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR CCA 72 bp | TCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTTaGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGA | + |
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Preference number: 3 (lower is better) Translates to: SGLVYEKPANSF*SKFMMKSLSVG Trigger: TCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATACTAACCCAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| 3UTR-3UTR CAA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTGCCAGCAAACTCATTTaGGTCCAAGTTCATGATGAA | + |
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Preference number: 3 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGASKLI*VQVHDE Trigger: TTCATCATGAACTTGGACCAAAATGAGTTTGCTGGC...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| CDS-3UTR GCA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGGGGCGAAGCGCACTGTaGTCTCCTCGCCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPGRSAL*SPRPRS Trigger: CGAGCGAGGGCGAGGAGAGCACAGTGCGCTTCGCCC...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR TCA 90 bp | TTCGGCCTGAAGCCTTACACACAGGCTCGGCAATGGACTCTGCATTCACCTACATCCCGAAGCCCCAGATaGAGTCGGTGCAGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: FGLKPYTQARQWTLHSPTSRSPR*SRCSGC Trigger: GCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGA...TGTAGGTGAATGCAGAGTCCATTGCCGAGCCTGTGTGTAAGGCTTCAGGCCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| CDS-3UTR GCA 90 bp | GTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGCCTGGGCGAAGCGCACTGTaGTCTCCTCGCCCTCGCTCG | + |
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Preference number: 4 (lower is better) Translates to: VQVHDEEFVSGSQFHRLPGRSAL*SPRPRS Trigger: CGAGCGAGGGCGAGGAGAGCACAGTGCGCTTCGCCC...AGGCAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
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| CDS-3UTR TCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGTCCCGAAGCCCCAGATaGAGTCGGTGCAGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWSRSPR*SRCSGC Trigger: GCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGA...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR GCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTTCCGTGTGGTCAGTaGCGCAGAGGCTGGGGACGT | + |
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Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWVPCGQ*RRGWGR Trigger: ACGTCCCCAGCCTCTGCGGCACTGACCACACGGAAC...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR TCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGCGGGGCAGGAGAACGTaGCGAACTCATGGCAGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QSSHILGFKPSSQPGKWKRGRRT*RTHGSA Trigger: AGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCG...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR GCA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTGGGCGAAGCGCACTGTaGTCTCCTCGCCCTCGCTCG | + |
|
Preference number: 4 (lower is better) Translates to: NRGTMNPGRLELVTDIRPGRSAL*SPRPRS Trigger: CGAGCGAGGGCGAGGAGAGCACAGTGCGCTTCGCCC...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGGCTTCTCCACCATGGTaGACTCCACATCGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQASPPW*TPHRHL Trigger: AAGATGACGATGTGGAGTGCACCATGGTGGAGAAGC...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGTCCGCTCTGAGAGCATaGCCTTGCCAAAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWSALRA*PCQSCL Trigger: AAGGCAGCTTTGGCAAGGTCATGCTCTCAGAGCGGA...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGAGCAGCGATCCACAGTaGTCACAGAAGGTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLARVTMWFQEQCQMSSDPQ*SQKVGL Trigger: CAGTCCTACCTTCTGTGACCACTGTGGATCGCTGCT...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGGGAGCCTTGGTACCTTaGCCAATCTTGGCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: KMAVQRTREKSKHFLSRGGALVP*PILALS Trigger: TGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCC...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTTGCCACGGCTTCCTTaGACATGGACTTGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: KMAVQRTREKSKHFLSRGLPRLP*TWTWDT Trigger: CGTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGCAGCATGGGGCTCCTTaGAACGGCCAACTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSHILGFKPSSQPGKWKQHGAP*NGQLVG Trigger: TCCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTG...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | ATTTTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGGTTCCGTGTGGTCAGTaGCGCAGAGGCTGGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: ILVQVHDEEFVSGSQFHRVPCGQ*RRGWGR Trigger: ACGTCCCCAGCCTCTGCGGCACTGACCACACGGAAC...CCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGATAATGCCCTTGCTCTaGAAGAAGAACAGACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQIMPLL*KKNRPM Trigger: CATCGGTCTGTTCTTCTTGCAGAGCAAGGGCATTAT...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGCAGCAGGACTCCAAATaGCCACCAGTCCACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWQQDSK*PPVHRL Trigger: AAGTCTGTGGACTGGTGGGCATTTGGAGTCCTGCTG...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGTACCGGAAAAACGCATaGTCCTTAATGTCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQYRKNA*SLMSRS Trigger: GGAACGAGACATTAAGGAGCATGCGTTTTTCCGGTA...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGAGTACAGGCGGTCCATaGTCTGGAAGCAGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPSTGGP*SGSRNG Trigger: TCCATTCCTGCTTCCAGACCATGGACCGCCTGTACT...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGCGGCTTCCTTGGACATaGACTTGGGATACGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWRLPWT*TWDTPH Trigger: ATGTGGCGTATCCCAAGTCCATGTCCAAGGAAGCCG...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGGCTTGCCTGGGTGTTTaGTCATTAGCCCTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLARVTMWFQEQCQMACLGV*SLALCR Trigger: TCTGCAAAGGGCTAATGACCAAACACCCAGGCAAGC...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | TTCCCTCTAGGGCAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTACAAAGCAGCAGACTTaGCACTGGAATCCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: FPLGQSSHILGFKPSSQPTKQQT*HWNPCF Trigger: GAAGCAGGGATTCCAGTGTCAAGTCTGCTGCTTTGT...AGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGCAATGTAGTCCGGAGTaGCACAGAATGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KMAVQRTREKSKHFLSRGQCSPE*HRMSWL Trigger: CAACCAAGACATTCTGTGGCACTCCGGACTACATTG...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGTATTCACCCTCTTCCTaGCTTAGTAACTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQYSPSS*LSNLNQ Trigger: CTGGTTCAAGTTACTAAGCCAGGAAGAGGGTGAATA...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGAGCTGTCTTTTCTTCTaGAGCCTTGGTACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWSCLFF*SLGTLA Trigger: GGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCT...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAGTACAGGCGGTCCATaGTCTGGAAGCAGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPLRQALHMTDANRGTMSTGGP*SGSRNG Trigger: TCCATTCCTGCTTCCAGACCATGGACCGCCTGTACT...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGTTGCCACGGCTTCCTTaGACATGGACTTGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: LHMTDANRGTMNPGRLELLPRLP*TWTWDT Trigger: CGTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAA...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTTCCTGATGACTTCCTaGTCAGGAGGTGTTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: KMAVQRTREKSKHFLSRGFLMTS*SGGVRT Trigger: AGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| 3UTR CAA 72 bp | AGTTCCACAGGCTGCCTGGTGAACTCTTTGTCGAAGTaGGAGGTGTCTCGCTTGTCTCTCATGACAGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSTGCLVNSLSK*EVSRLSLMTAV Trigger: AACAGCTGTCATGAGAGACAAGCGAGACACCTCCAACTTCGACAAAGAGTTCACCAGGCAGCCTGTGGAACT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTCGGGGCAGGAGAACGTaGCGAACTCATGGCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSRGRRT*RTHGSA Trigger: AGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCG...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGTTTAACGTAGGGATCTaGCAAGCCATTGGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWFNVGI*QAIGVH Trigger: ATGGACCCCAATGGCTTGTCAGATCCCTACGTTAAA...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | GCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATAATCACGCAGCGCTTGTaGACGTTCATCATACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AAIYLDSSQAPSLESGRIITQRL*TFIIQV Trigger: CACCTGTATGATGAACGTGCACAAGCGCTGCGTGAT...TATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | CTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGATGGTCATTAGCCCTTTaGAGATTGCCACGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRQALHMTDANRGTMNPGWSLAL*RLPRLP Trigger: AGGAAGCCGTGGCAATCTGCAAAGGGCTAATGACCA...TCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGTGGTCATTAGCCCTTTaGAGATTGCCACGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: QSSHILGFKPSSQPGKWKWSLAL*RLPRLP Trigger: AGGAAGCCGTGGCAATCTGCAAAGGGCTAATGACCA...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGCCTAGCTGTCTTTTCTTCTaGAGCCTTGGTACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VQVHDEEFVSGSQFHRLPSCLFF*SLGTLA Trigger: GGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCT...AGGCAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTCCACATCGTCATCTTaGATCACCACGTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPSTSSS*ITTSFF Trigger: GAAGAAGGACGTGGTGATCCAAGATGACGATGTGGA...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATATGCCACAGAATGTCTTaGTTGTCACCCCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AAIYLDSSQAPSLESGRICHRMS*LSPHPR Trigger: TCTGGGATGGGGTGACAACCAAGACATTCTGTGGCA...TATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGTGCCACAGAATGTCTTaGTTGTCACCCCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KSPLRQALHMTDANRGTMCHRMS*LSPHPR Trigger: TCTGGGATGGGGTGACAACCAAGACATTCTGTGGCA...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGCGGCTTCCTTGGACATaGACTTGGGATACGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: LVQVHDEEFVSGSQFHRLRLPWT*TWDTPH Trigger: ATGTGGCGTATCCCAAGTCCATGTCCAAGGAAGCCG...CAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATGTTAGGACTGGTGGATaGCGGGTGAAAAACCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDVRTGG*RVKNRS Trigger: CGACCGGTTTTTCACCCGCCATCCACCAGTCCTAAC...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGAGGGCTGATAAGCAATaGTCTCTGGAGCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPRADKQ*SLEQCS Trigger: ACTACATTGCTCCAGAGATCATTGCTTATCAGCCCT...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTCCACAGGCTGCCTGGTaGACTCTTTGTCGAAGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSPQAAW*TLCRSW Trigger: CCAACTTCGACAAAGAGTTCACCAGGCAGCCTGTGG...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR TCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATCTGGTGGATGGCGGGTaGAAAACCGGTCGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDLVDGG*KTGRSF Trigger: AAAACTTCGACCGGTTTTTCACCCGCCATCCACCAG...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGTTCCGTGTGGTCAGTaGCGCAGAGGCTGGGGACGT | + |
|
Preference number: 4 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDVPCGQ*RRGWGR Trigger: ACGTCCCCAGCCTCTGCGGCACTGACCACACGGAAC...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGTCATCCGGTCCCTGTTaGCATTGTTGTCAAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWSSGPC*HCCQIW Trigger: CCAAATTTGACAACAATGGCAACAGGGACCGGATGA...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATATACCTTGGCCAATCTTaGCTCTCTCAAACTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: AAIYLDSSQAPSLESGRIYLGQS*LSQTSA Trigger: GGCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTA...TATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATTTCTTCTGGAGCCTTaGTACCTTGGCCAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGFLLEP*YLGQSW Trigger: CCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAA...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGCCTTTTCTTCTGGAGCCTTaGTACCTTGGCCAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: VQVHDEEFVSGSQFHRLPFLLEP*YLGQSW Trigger: CCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAA...AGGCAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGAGAAGAACAGACCGATaGCAATCTCTGCGGCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QSSHILGFKPSSQPGKWKRRTDR*QSLRRK Trigger: TTTACGCCGCAGAGATTGCCATCGGTCTGTTCTTCT...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | TCGGTTCATTGGATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGCGGCTTCCTTGGACATaGACTTGGGATACGCCACAT | + |
|
Preference number: 4 (lower is better) Translates to: SVHWMSFWKSGKVYLYRWRLPWT*TWDTPH Trigger: ATGTGGCGTATCCCAAGTCCATGTCCAAGGAAGCCG...CCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCATCCAATGAACCGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| 3UTR CAA 72 bp | GCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATaGGTAACAGACATTCGGCCTGAAGCCTTACACACA | + |
|
Preference number: 4 (lower is better) Translates to: ANRGTMNPGRLE*VTDIRPEALHT Trigger: TGTGTGTAAGGCTTCAGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGC 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGTCTGATTCCTTCAGCTaGAATCTGAAGGTTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VLWDLARVTMWFQEQCQMSDSFS*NLKVSF Trigger: GAATGAAACCTTCAGATTTCAGCTGAAGGAATCAGA...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTCTTGGTCTTCTGTTTaGTCTCACTTTTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPSWSSV*SHFWDQ Trigger: CTGATCCCAAAAGTGAGAGCAAACAGAAGACCAAGA...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR GCA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGTCATCCGGTCCCTGTTaGCATTGTTGTCAAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LHMTDANRGTMNPGRLELSSGPC*HCCQIW Trigger: CCAAATTTGACAACAATGGCAACAGGGACCGGATGA...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTACAGCAGGACTCCAAATaGCCACCAGTCCACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLQQDSK*PPVHRL Trigger: AAGTCTGTGGACTGGTGGGCATTTGGAGTCCTGCTG...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATGTGGCTGAATCTCCTTaGGTTCGAGTTTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDVAESP*VRVSPS Trigger: ACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCAC...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGGACTGGAGTACGTGTaGATCTTAAACTTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWGLEYV*ILNLCL Trigger: CAAACACAAGTTTAAGATCCACACGTACTCCAGTCC...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCAGCAGCGATCCACAGTaGTCACAGAAGGTAGGACTG | + |
|
Preference number: 4 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFSSDPQ*SQKVGL Trigger: CAGTCCTACCTTCTGTGACCACTGTGGATCGCTGCT...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | TTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGCTGTACCTTGGCCAATCTTaGCTCTCTCAAACTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: LVQVHDEEFVSGSQFHRLYLGQS*LSQTSA Trigger: GGCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTA...CAGCCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTGGAGCCTTGGTACCTTaGCCAATCTTGGCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: EFLEVWKSVPLSVGNALIGALVP*PILALS Trigger: TGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCC...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTGCCACGGCTTCCTTaGACATGGACTTGGGATACG | + |
|
Preference number: 4 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLLPRLP*TWTWDT Trigger: CGTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAA...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAATCCCGAAGCCCCAGATaGAGTCGGTGCAGTGGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQESRSPR*SRCSGC Trigger: GCAGCCACTGCACCGACTTCATCTGGGGCTTCGGGA...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACGGGGCAGGAGAACGTaGCGAACTCATGGCAGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQERGRRT*RTHGSA Trigger: AGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCG...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTATGACAGAGATCCCATaGAGTCATTCCTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRGTMNPGRLELVTDIRPMTEIP*SHSCWS Trigger: TGACCAGCAGGAATGACTTCATGGGATCTCTGTCAT...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTTCCGCTCTGAGAGCATaGCCTTGCCAAAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSSALRA*PCQSCL Trigger: AAGGCAGCTTTGGCAAGGTCATGCTCTCAGAGCGGA...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTATCACGCAGCGCTTGTaGACGTTCATCATACAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFLEVWKSVPLSVGNALIITQRL*TFIIQV Trigger: CACCTGTATGATGAACGTGCACAAGCGCTGCGTGAT...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGTCTTGGTCTTCTGTTTaGTCTCACTTTTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: LHMTDANRGTMNPGRLELSWSSV*SHFWDQ Trigger: CTGATCCCAAAAGTGAGAGCAAACAGAAGACCAAGA...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGGCTTCTCCACCATGGTaGACTCCACATCGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: ILVQVHDEEFVSGSQFHRASPPW*TPHRHL Trigger: AAGATGACGATGTGGAGTGCACCATGGTGGAGAAGC...CCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCGTGGCTGAATCTCCTTaGGTTCGAGTTTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFVAESP*VRVSPS Trigger: ACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCAC...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGTTTGCTCTCACTTTTaGGATCAGGGATCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QSSHILGFKPSSQPGKWKVCSHF*DQGSVS Trigger: TGAAACTGATCCCTGATCCCAAAAGTGAGAGCAAAC...CTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAGGTTTCATTCCACTCTaGATTGAGGGAACACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGGFIPL*IEGTLD Trigger: ATCAAGTGTTCCCTCAATCCAGAGTGGAATGAAACC...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTGCTTGCCTGGGTGTTTaGTCATTAGCCCTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSACLGV*SLALCR Trigger: TCTGCAAAGGGCTAATGACCAAACACCCAGGCAAGC...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAACTCTTTGTCGAAGTTaGAGGTGTCTCGCTTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: MTDANRGTMNPGRLELVTTLCRS*RCLACL Trigger: GAGACAAGCGAGACACCTCCAACTTCGACAAAGAGT...TGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| 3UTR CAA 72 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTaGAGTAGTTTGGGGGATGAAGGTACCGCTATCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TMWFQEQCQMSF*SSLGDEGTAIR Trigger: TCTGATAGCGGTACCTTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTTTTAACGTAGGGATCTaGCAAGCCATTGGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSFNVGI*QAIGVH Trigger: ATGGACCCCAATGGCTTGTCAGATCCCTACGTTAAA...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTTAACGTAGGGATCTaGCAAGCCATTGGGGTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLFNVGI*QAIGVH Trigger: ATGGACCCCAATGGCTTGTCAGATCCCTACGTTAAA...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR TCA 90 bp | GATTATGCAGCACTTTCTACATGCCACCTGCATAATTCCATCTCCTTGAGATGCATGACAGAGATCCCATaGAGTCATTCCTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: DYAALSTCHLHNSISLRCMTEIP*SHSCWS Trigger: TGACCAGCAGGAATGACTTCATGGGATCTCTGTCAT...GCATCTCAAGGAGATGGAATTATGCAGGTGGCATGTAGAAAGTGCTGCATAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR TCA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATTCCGCTCTGAGAGCATaGCCTTGCCAAAGCTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDSALRA*PCQSCL Trigger: AAGGCAGCTTTGGCAAGGTCATGCTCTCAGAGCGGA...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTCTGGTGGATGGCGGGTaGAAAACCGGTCGAAGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSLVDGG*KTGRSF Trigger: AAAACTTCGACCGGTTTTTCACCCGCCATCCACCAG...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCAATGTAGTCCGGAGTaGCACAGAATGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: EFLEVWKSVPLSVGNALIQCSPE*HRMSWL Trigger: CAACCAAGACATTCTGTGGCACTCCGGACTACATTG...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGGTGGCTGAATCTCCTTaGGTTCGAGTTTCTCCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWVAESP*VRVSPS Trigger: ACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCAC...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCACAACTTTAGCTGTCTTTTCTTCTaGAGCCTTGGTACCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKRHEFTGTAKLTHNFSCLFF*SLGTLA Trigger: GGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCT...AAAGTTGTGAGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATCCACATCGTCATCTTaGATCACCACGTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLSTSSS*ITTSFF Trigger: GAAGAAGGACGTGGTGATCCAAGATGACGATGTGGA...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAGAAGAACAGACCGATaGCAATCTCTGCGGCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSRRTDR*QSLRRK Trigger: TTTACGCCGCAGAGATTGCCATCGGTCTGTTCTTCT...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTGTTAGGACTGGTGGATaGCGGGTGAAAAACCGGTCG | + |
|
Preference number: 4 (lower is better) Translates to: LHINDKLWVSIREASKLIVRTGG*RVKNRS Trigger: CGACCGGTTTTTCACCCGCCATCCACCAGTCCTAAC...AATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCACAGCATGGGGCTCCTTaGAACGGCCAACTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSQHGAP*NGQLVG Trigger: TCCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTG...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTCAGCATGGGGCTCCTTaGAACGGCCAACTTGTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGQHGAP*NGQLVG Trigger: TCCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTG...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAGGGCTGATAAGCAATaGTCTCTGGAGCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSRADKQ*SLEQCS Trigger: ACTACATTGCTCCAGAGATCATTGCTTATCAGCCCT...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTGCTTCTCCACCATGGTaGACTCCACATCGTCATCTT | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSASPPW*TPHRHL Trigger: AAGATGACGATGTGGAGTGCACCATGGTGGAGAAGC...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTAATAATGCCCTTGCTCTaGAAGAAGAACAGACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLIMPLL*KKNRPM Trigger: CATCGGTCTGTTCTTCTTGCAGAGCAAGGGCATTAT...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ATTTTGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGGAGTCAGTTCCACAGGTACCGGAAAAACGCATaGTCCTTAATGTCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: ILVQVHDEEFVSGSQFHRYRKNA*SLMSRS Trigger: GGAACGAGACATTAAGGAGCATGCGTTTTTCCGGTA...CCTGTGGAACTGACTCCCACTGACAAACTCTTCATCATGAACTTGGACCAAAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTGTTTGCTCTCACTTTTaGGATCAGGGATCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NRGTMNPGRLELVTDIRPVCSHF*DQGSVS Trigger: TGAAACTGATCCCTGATCCCAAAAGTGAGAGCAAAC...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | TCGGTTCATTGGATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGTATTCACCCTCTTCCTaGCTTAGTAACTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: SVHWMSFWKSGKVYLYRWYSPSS*LSNLNQ Trigger: CTGGTTCAAGTTACTAAGCCAGGAAGAGGGTGAATA...CCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCATCCAATGAACCGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTTGCCACAGAATGTCTTaGTTGTCACCCCATCCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSCHRMS*LSPHPR Trigger: TCTGGGATGGGGTGACAACCAAGACATTCTGTGGCA...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| 3UTR CAA 72 bp | TTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTaGGGGGATGAAGGTACCGCTATCAGACATACAGTA | + |
|
Preference number: 4 (lower is better) Translates to: FQEQCQMSFLSS*GDEGTAIRHTV Trigger: TACTGTATGTCTGATAGCGGTACCTTCATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| 3UTR CAA 72 bp | CTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTaGGTCCAAGTTCATGATGAAGAGTTTGTCAGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LWVSIREASKLI*VQVHDEEFVSG Trigger: CCCACTGACAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTTCTGATTCCTTCAGCTaGAATCTGAAGGTTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: NRGTMNPGRLELVTDIRPSDSFS*NLKVSF Trigger: GAATGAAACCTTCAGATTTCAGCTGAAGGAATCAGA...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGAGGGCTGATAAGCAATaGTCTCTGGAGCAATGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWRADKQ*SLEQCS Trigger: ACTACATTGCTCCAGAGATCATTGCTTATCAGCCCT...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGATAATGCCCTTGCTCTaGAAGAAGAACAGACCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWIMPLL*KKNRPM Trigger: CATCGGTCTGTTCTTCTTGCAGAGCAAGGGCATTAT...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | GTATACGAGAAGCCAGCAAACTCATTTTGGTCCAAGTTCATGATGAAGAGTTTGCAATGTAGTCCGGAGTaGCACAGAATGTCTTGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: VYEKPANSFWSKFMMKSLQCSPE*HRMSWL Trigger: CAACCAAGACATTCTGTGGCACTCCGGACTACATTG...CAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGTACCGGAAAAACGCATaGTCCTTAATGTCTCGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWYRKNA*SLMSRS Trigger: GGAACGAGACATTAAGGAGCATGCGTTTTTCCGGTA...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGGGAGCCTTGGTACCTTaGCCAATCTTGGCTCTCTCA | + |
|
Preference number: 4 (lower is better) Translates to: ILKQKVSSKRHEFTGTAKGALVP*PILALS Trigger: TGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCC...CTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCAAGTACAGGCGGTCCATaGTCTGGAAGCAGGAATGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSSTGGP*SGSRNG Trigger: TCCATTCCTGCTTCCAGACCATGGACCGCCTGTACT...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTACAAAGCAGCAGACTTaGCACTGGAATCCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGTKQQT*HWNPCF Trigger: GAAGCAGGGATTCCAGTGTCAAGTCTGCTGCTTTGT...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATTCTTGGTCTTCTGTTTaGTCTCACTTTTGGGATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QAKHTKKSPLRQALHMTDSWSSV*SHFWDQ Trigger: CTGATCCCAAAAGTGAGAGCAAACAGAAGACCAAGA...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACAGCAGGACTCCAAATaGCCACCAGTCCACAGACTT | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQEQQDSK*PPVHRL Trigger: AAGTCTGTGGACTGGTGGGCATTTGGAGTCCTGCTG...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGGACTGGAGTACGTGTaGATCTTAAACTTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: QAKHTKKSPLRQALHMTDGLEYV*ILNLCL Trigger: CAAACACAAGTTTAAGATCCACACGTACTCCAGTCC...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCACAACTTTTATTCACCCTCTTCCTaGCTTAGTAACTTGAACCAG | + |
|
Preference number: 4 (lower is better) Translates to: VSSKRHEFTGTAKLTHNFYSPSS*LSNLNQ Trigger: CTGGTTCAAGTTACTAAGCCAGGAAGAGGGTGAATA...AAAGTTGTGAGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTGCTTGCCTGGGTGTTTaGTCATTAGCCCTTTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGACLGV*SLALCR Trigger: TCTGCAAAGGGCTAATGACCAAACACCCAGGCAAGC...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCCCAGCAAACTCATTTTaGTCCAAGTTCATGATGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFPANSF*SKFMMK Trigger: CTTCATCATGAACTTGGACCAAAATGAGTTTGCTGG...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATTTCCTGATGACTTCCTaGTCAGGAGGTGTTAGGACT | + |
|
Preference number: 4 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDFLMTS*SGGVRT Trigger: AGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAA...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTATGACAGAGATCCCATaGAGTCATTCCTGCTGGTCA | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGMTEIP*SHSCWS Trigger: TGACCAGCAGGAATGACTTCATGGGATCTCTGTCAT...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR GCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAATGGTCATTAGCCCTTTaGAGATTGCCACGGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQEWSLAL*RLPRLP Trigger: AGGAAGCCGTGGCAATCTGCAAAGGGCTAATGACCA...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTGGACTGGAGTACGTGTaGATCTTAAACTTGTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSGLEYV*ILNLCL Trigger: CAAACACAAGTTTAAGATCCACACGTACTCCAGTCC...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GTATACGAGAAGCCAGCAAACTCATTTTGGTCCAAGTTCATGATGAAGAGTTTGGGTTTCATTCCACTCTaGATTGAGGGAACACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: VYEKPANSFWSKFMMKSLGFIPL*IEGTLD Trigger: ATCAAGTGTTCCCTCAATCCAGAGTGGAATGAAACC...CAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTTCTTCTGGAGCCTTaGTACCTTGGCCAATCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSFLLEP*YLGQSW Trigger: CCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAA...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCCACATCGTCATCTTaGATCACCACGTCCTTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGSTSSS*ITTSFF Trigger: GAAGAAGGACGTGGTGATCCAAGATGACGATGTGGA...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTAGAAGAACAGACCGATaGCAATCTCTGCGGCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGRRTDR*QSLRRK Trigger: TTTACGCCGCAGAGATTGCCATCGGTCTGTTCTTCT...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR TCA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTTCTGATTCCTTCAGCTaGAATCTGAAGGTTTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSSDSFS*NLKVSF Trigger: GAATGAAACCTTCAGATTTCAGCTGAAGGAATCAGA...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGGTTTCATTCCACTCTaGATTGAGGGAACACTTGAT | + |
|
Preference number: 4 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDGFIPL*IEGTLD Trigger: ATCAAGTGTTCCCTCAATCCAGAGTGGAATGAAACC...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAATACCTTGGCCAATCTTaGCTCTCTCAAACTTCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQEYLGQS*LSQTSA Trigger: GGCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTA...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | GTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCACAACTTTATTAATGACAAACTCTaGGTTAGTATACGAGAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: VSSKRHEFTGTAKLTHNFINDKL*VSIREA Trigger: GGCTTCTCGTATACTAACCCAGAGTTTGTCATTAAT...AAAGTTGTGAGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR GCA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAATCATCCGGTCCCTGTTaGCATTGTTGTCAAATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SYQFLNKKFPPRDTNSQESSGPC*HCCQIW Trigger: CCAAATTTGACAACAATGGCAACAGGGACCGGATGA...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CCA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCAGTTTGCTCTCACTTTTaGGATCAGGGATCAGTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSVCSHF*DQGSVS Trigger: TGAAACTGATCCCTGATCCCAAAAGTGAGAGCAAAC...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTGCCGGAGGGCGCCTTaGCGGGCGAAGCGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGCRRAP*RAKRTV Trigger: CACAGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGCA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS TCA 90 bp | GGTCATCAGAGGCCGGGCCCTTGTCCGCACCGGGGCAGGAGAACGTaGCGAACTCATGGCAGCGCTTGTGTACAACAAAGCAGCAGACTT | + |
|
Preference number: 5 (lower is better) Translates to: GHQRPGPCPHRGRRT*RTHGSACVQQSSRL Trigger: AAGTCTGCTGCTTTGTTGTACACAAGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCGGTGCGGACAAGGGCCCGGCCTCTGATGACC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTAGGGCAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTTGCCGCAGCTCTTCATaGCCCTCGCTTCCTTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FPLGQSSHILGFKPSSQPCRSSS*PSLPSG Trigger: GCCCGAAGGAAGCGAGGGCAATGAAGAGCTGCGGCA...AGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGGGATCTGACAAGCCATaGGGGTCCATAGGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQGSDKP*GSIGTR Trigger: TCTGGTACCTATGGACCCCAATGGCTTGTCAGATCC...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CTCAACTGCTTCCAGAACAGGCAGCGTGGAGGGATTCCCTCTAGGGCAAAGCAGGAATCCAGCATCACGTaGTCAAGTTTCAGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LNCFQNRQRGGIPSRAKQESSIT*SSFRSR Trigger: CCGCGACCTGAAACTTGACAACGTGATGCTGGATTC...CTGCTTTGCCCTAGAGGGAATCCCTCCACGCTGCCTGTTCTGGAAGCAGTTGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | ACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACTGCCGCAGCTCTTCATaGCCCTCGCTTCCTTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TDANRGTMNPGRLELVTDCRSSS*PSLPSG Trigger: GCCCGAAGGAAGCGAGGGCAATGAAGAGCTGCGGCA...GTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGACAGCATGGGGCTCCTaGAAACGGCCAACTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGTAWGS*KRPTCW Trigger: CCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTGT...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTTGCCGGAGGGCGCCTTaGCGGGCGAAGCGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSCRRAP*RAKRTV Trigger: CACAGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGCA...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGAGCCTTGGTACCTaGGCCAATCTTGGCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPWSLGT*ANLGSL Trigger: GAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCA...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGATTGCCACGGCTTCCTaGGACATGGACTTGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: VLWDLARVTMWFQEQCQMIATAS*DMDLGY Trigger: GTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAAT...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTTAGCCCTTTGCAGATaGCCACGGCTTCCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGLALCR*PRLPWT Trigger: TGTCCAAGGAAGCCGTGGCAATCTGCAAAGGGCTAA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTGCCGGAGGGCGCCTTaGCGGGCGAAGCGCACTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LHINDKLWVSIREASKLICRRAP*RAKRTV Trigger: CACAGTGCGCTTCGCCCGCAAAGGCGCCCTCCGGCA...AATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTTCATCACGCAGCGCTaGTGCACGTTCATCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGFITQR*CTFIIQ Trigger: CTGTATGATGAACGTGCACAAGCGCTGCGTGATGAA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATGCCGCAGCTCTTCATaGCCCTCGCTTCCTTCGGGC | + |
|
Preference number: 5 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLCRSSS*PSLPSG Trigger: GCCCGAAGGAAGCGAGGGCAATGAAGAGCTGCGGCA...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAGTGCCACAGAATGTCTaGGTTGTCACCCCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGVPQNV*VVTPSQ Trigger: CTGGGATGGGGTGACAACCAAGACATTCTGTGGCAC...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS CCA 90 bp | ATATTCCTGATGACTTCCTGGTCAGGAGGTGTTAGGACTGGTGGATaGCGGGTGAAAAACCGGTCGAAGTTTTCAGCGTTTCGCCCACAA | + |
|
Preference number: 5 (lower is better) Translates to: IFLMTSWSGGVRTGG*RVKNRSKFSAFRPQ Trigger: TTGTGGGCGAAACGCTGAAAACTTCGACCGGTTTTTCACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAATAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GTCCTTTGGGACCTGGCTAGAGTGACCATGTGGTTCCAGGAACAGTGCCAAATGATCTTAAACTTGTGTTaGCTCCGGGGGTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: VLWDLARVTMWFQEQCQMILNLC*LRGSSE Trigger: CTCTGATGACCCCCGGAGCAAACACAAGTTTAAGAT...CATTTGGCACTGTTCCTGGAACCACATGGTCACTCTAGCCAGGTCCCAAAGGAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGCTCCACATCGTCATCTaGGATCACCACGTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: KDGSAEDQGEKQAFSLPWLHIVI*DHHVLL Trigger: AAGAAGGACGTGGTGATCCAAGATGACGATGTGGAG...CCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | ACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACACAGCATGGGGCTCCTaGAAACGGCCAACTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: TDANRGTMNPGRLELVTDTAWGS*KRPTCW Trigger: CCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTGT...GTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGAATCCAGCATCACGTaGTCAAGTTTCAGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: LHMTDANRGTMNPGRLELESSIT*SSFRSR Trigger: CCGCGACCTGAAACTTGACAACGTGATGCTGGATTC...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGATTAGCCCTTTGCAGATaGCCACGGCTTCCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: LRQALHMTDANRGTMNPGLALCR*PRLPWT Trigger: TGTCCAAGGAAGCCGTGGCAATCTGCAAAGGGCTAA...TCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | TTCCCTCTAGGGCAAAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTAACAAAGCAGCAGACTaGACACTGGAATCCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FPLGQSSHILGFKPSSQPNKAAD*TLESLL Trigger: AAGCAGGGATTCCAGTGTCAAGTCTGCTGCTTTGTT...AGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTTTGCCCTAGAGGGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAACTCATGGCAGCGCTaGTGTACAACAAAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KSPLRQALHMTDANRGTMNSWQR*CTTKQQ Trigger: CTGCTGCTTTGTTGTACACAAGCGCTGCCATGAGTT...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAAACTCATGGCAGCGCTaGTGTACAACAAAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGNSWQR*CTTKQQ Trigger: CTGCTGCTTTGTTGTACACAAGCGCTGCCATGAGTT...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGTGTTTGCTCTCACTTTaGGGATCAGGGATCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGCLLSL*GSGISF Trigger: GAAACTGATCCCTGATCCCAAAAGTGAGAGCAAACA...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | GGTAAAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGGGATTGAGGGAACACTaGATGGTCTTGGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: GKDGSAEDQGEKQAFSLPGLREH*MVLVFC Trigger: ACAGAAGACCAAGACCATCAAGTGTTCCCTCAATCC...CGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTTTACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGAGTACCTTGGCCAATCTaGGCTCTCTCAAACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGVPWPI*ALSNFC Trigger: GCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTAC...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATTCTGAGAGCATGACCTaGCCAAAGCTGCCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDSESMT*PKLPFP Trigger: GGGGAAAGGCAGCTTTGGCAAGGTCATGCTCTCAGA...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR CAA 90 bp | ACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACGAATCCAGCATCACGTaGTCAAGTTTCAGGTCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: TDANRGTMNPGRLELVTDESSIT*SSFRSR Trigger: CCGCGACCTGAAACTTGACAACGTGATGCTGGATTC...GTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGACACAGAATGTCTTGGTaGTCACCCCATCCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGHRMSW*SPHPRC Trigger: ACATCTGGGATGGGGTGACAACCAAGACATTCTGTG...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR CAA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTGTGCCACAGAATGTCTaGGTTGTCACCCCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: NRGTMNPGRLELVTDIRPVPQNV*VVTPSQ Trigger: CTGGGATGGGGTGACAACCAAGACATTCTGTGGCAC...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATCCTTGGACATGGACTaGGGATACGCCACATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGSLDMD*GYATLC Trigger: ACACAATGTGGCGTATCCCAAGTCCATGTCCAAGGA...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGTGCCTGGTGAACTCTTaGTCGAAGTTGGAGGTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHMTDANRGTMNPGRLELCLVNS*SKLEVS Trigger: AGACACCTCCAACTTCGACAAAGAGTTCACCAGGCA...CAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR CAA 90 bp | ACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACGTGTGGATCTTAAACTaGTGTTTGCTCCGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TDANRGTMNPGRLELVTDVWILN*CLLRGS Trigger: TGACCCCCGGAGCAAACACAAGTTTAAGATCCACAC...GTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACATTCGGCCTGGATCTGACAAGCCATaGGGGTCCATAGGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: NRGTMNPGRLELVTDIRPGSDKP*GSIGTR Trigger: TCTGGTACCTATGGACCCCAATGGCTTGTCAGATCC...AGGCCGAATGTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGGGATTGAGGGAACACTaGATGGTCTTGGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: KSPLRQALHMTDANRGTMGLREH*MVLVFC Trigger: ACAGAAGACCAAGACCATCAAGTGTTCCCTCAATCC...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTGGAGCCTTGGTACCTaGGCCAATCTTGGCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFWSLGT*ANLGSL Trigger: GAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCA...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTACAGCATGGGGCTCCTaGAAACGGCCAACTTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: EFLEVWKSVPLSVGNALITAWGS*KRPTCW Trigger: CCAACAAGTTGGCCGTTTCAAGGAGCCCCATGCTGT...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | ACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGACCACAGAATGTCTTGGTaGTCACCCCATCCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TDANRGTMNPGRLELVTDHRMSW*SPHPRC Trigger: ACATCTGGGATGGGGTGACAACCAAGACATTCTGTG...GTCTGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTGTGCCACAGAATGTCTaGGTTGTCACCCCATCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: EFLEVWKSVPLSVGNALIVPQNV*VVTPSQ Trigger: CTGGGATGGGGTGACAACCAAGACATTCTGTGGCAC...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | AAGCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATTGGGATACGCCACATaGTGTTCCATGATTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: KQPYTWIQAKLPAWKVEGLGYAT*CSMIDW Trigger: CCAGTCAATCATGGAACACAATGTGGCGTATCCCAA...TCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGCTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS-3UTR CAA 90 bp | ATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACATTAGCCCTTTGCAGATaGCCACGGCTTCCTTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: MTDANRGTMNPGRLELVTLALCR*PRLPWT Trigger: TGTCCAAGGAAGCCGTGGCAATCTGCAAAGGGCTAA...TGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTCGCTTGCCTGGGTGTTaGGTCATTAGCCCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSRLPGC*VISPLQ Trigger: CTGCAAAGGGCTAATGACCAAACACCCAGGCAAGCG...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
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| CDS-3UTR CAA 90 bp | GATTATGCAGCACTTTCTACATGCCACCTGCATAATTCCATCTCCTTGAGATGCCGCTTGCCTGGGTGTTaGGTCATTAGCCCTTTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: DYAALSTCHLHNSISLRCRLPGC*VISPLQ Trigger: CTGCAAAGGGCTAATGACCAAACACCCAGGCAAGCG...GCATCTCAAGGAGATGGAATTATGCAGGTGGCATGTAGAAAGTGCTGCATAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
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| CDS CCA 90 bp | GAAAATCCTTCGAATTCTGATTGGTCAATATTCCTGATGACTTCCTaGTCAGGAGGTGTTAGGACTGGTGGATGGCGGGTGAAAAACCGG | + |
|
Preference number: 5 (lower is better) Translates to: ENPSNSDWSIFLMTS*SGGVRTGGWRVKNR Trigger: CCGGTTTTTCACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATGTGTGGATCTTAAACTaGTGTTTGCTCCGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDVWILN*CLLRGS Trigger: TGACCCCCGGAGCAAACACAAGTTTAAGATCCACAC...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCGGATCTGACAAGCCATaGGGGTCCATAGGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFGSDKP*GSIGTR Trigger: TCTGGTACCTATGGACCCCAATGGCTTGTCAGATCC...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGTGTTTGCTCTCACTTTaGGGATCAGGGATCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPLRQALHMTDANRGTMCLLSL*GSGISF Trigger: GAAACTGATCCCTGATCCCAAAAGTGAGAGCAAACA...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGATGTTTGCTCTCACTTTaGGGATCAGGGATCAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LRQALHMTDANRGTMNPGCLLSL*GSGISF Trigger: GAAACTGATCCCTGATCCCAAAAGTGAGAGCAAACA...TCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACAGTACCTTGGCCAATCTaGGCTCTCTCAAACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: MTDANRGTMNPGRLELVTVPWPI*ALSNFC Trigger: GCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTAC...TGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAGATGGCAGTGCAGAGGACCAGGGAGAAAAGCAAGCATTTTCTCTCCCGTGGGCCATTGTTGTCAAATTaGGAGATAGTGTTAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KMAVQRTREKSKHFLSRGPLLSN*EIVLAV Trigger: GACAGCTAACACTATCTCCAAATTTGACAACAATGG...CCCACGGGAGAGAAAATGCTTGCTTTTCTCCCTGGTCCTCTGCACTGCCATCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGTCTGAGAGCATGACCTaGCCAAAGCTGCCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWSESMT*PKLPFP Trigger: GGGGAAAGGCAGCTTTGGCAAGGTCATGCTCTCAGA...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | TCGGTTCATTGGATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGAACAAAGCAGCAGACTaGACACTGGAATCCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: SVHWMSFWKSGKVYLYRWNKAAD*TLESLL Trigger: AAGCAGGGATTCCAGTGTCAAGTCTGCTGCTTTGTT...CCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCATCCAATGAACCGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTTTCATCACGCAGCGCTaGTGCACGTTCATCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: VSGSLEKCTSIGGQCSYSFITQR*CTFIIQ Trigger: CTGTATGATGAACGTGCACAAGCGCTGCGTGATGAA...AGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTTCATCACGCAGCGCTaGTGCACGTTCATCATACAG | + |
|
Preference number: 5 (lower is better) Translates to: SFWKSGKVYLYRWAMLLFFITQR*CTFIIQ Trigger: CTGTATGATGAACGTGCACAAGCGCTGCGTGATGAA...GAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GCAGCCATATACTTGGATTCAAGCCAAGCTCCCAGCCTGGAAAGTGGAAGGATATCCCTGTTGCCATTGTaGTCAAATTTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: AAIYLDSSQAPSLESGRISLLPL*SNLEIV Trigger: CACTATCTCCAAATTTGACAACAATGGCAACAGGGA...TATCCTTCCACTTTCCAGGCTGGGAGCTTGGCTTGAATCCAAGTATATGGCTGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | GTATACGAGAAGCCAGCAAACTCATTTTGGTCCAAGTTCATGATGAAGAGTTTGTCTGAGAGCATGACCTaGCCAAAGCTGCCTTTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: VYEKPANSFWSKFMMKSLSESMT*PKLPFP Trigger: GGGGAAAGGCAGCTTTGGCAAGGTCATGCTCTCAGA...CAAACTCTTCATCATGAACTTGGACCAAAATGAGTTTGCTGGCTTCTCGTATAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATATTGCCACGGCTTCCTaGGACATGGACTTGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: QAKHTKKSPLRQALHMTDIATAS*DMDLGY Trigger: GTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAAT...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGAATCCTGGAGCCAGCAAACTCATTTaGGTCCAAGTTCATGATGAA | + |
|
Preference number: 5 (lower is better) Translates to: LRQALHMTDANRGTMNPGASKLI*VQVHDE Trigger: TTCATCATGAACTTGGACCAAAATGAGTTTGCTGGC...TCCAGGATTCATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCACAACTTTAACTCATGGCAGCGCTaGTGTACAACAAAGCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSKRHEFTGTAKLTHNFNSWQR*CTTKQQ Trigger: CTGCTGCTTTGTTGTACACAAGCGCTGCCATGAGTT...AAAGTTGTGAGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGTACCTTGGCCAATCTaGGCTCTCTCAAACTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QAKHTKKSPLRQALHMTDVPWPI*ALSNFC Trigger: GCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTAC...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATGCCAATAGAGGCACCATGCCATTGTTGTCAAATTaGGAGATAGTGTTAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KSPLRQALHMTDANRGTMPLLSN*EIVLAV Trigger: GACAGCTAACACTATCTCCAAATTTGACAACAATGG...CATGGTGCCTCTATTGGCATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ACCATGTGGTTCCAGGAACAGTGCCAAATGTCATTCTTGAGTAGTTTGGGGGATCGGTCCCTGTTGCCATaGTTGTCAAATTTGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: TMWFQEQCQMSFLSSLGDRSLLP*LSNLEI Trigger: TATCTCCAAATTTGACAACAATGGCAACAGGGACCG...ATCCCCCAAACTACTCAAGAATGACATTTGGCACTGTTCCTGGAACCACATGGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000064989.12 |
||
| CDS-3UTR CAA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATCTCCACATCGTCATCTaGGATCACCACGTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: QAKHTKKSPLRQALHMTDLHIVI*DHHVLL Trigger: AAGAAGGACGTGGTGATCCAAGATGACGATGTGGAG...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATGAGTTTCTGGAAGTCTGGCACAGAATGTCTTGGTaGTCACCCCATCCCAGATGT | + |
|
Preference number: 5 (lower is better) Translates to: TQLSFDTVGSLDEFLEVWHRMSW*SPHPRC Trigger: ACATCTGGGATGGGGTGACAACCAAGACATTCTGTG...CCAGACTTCCAGAAACTCATCCAATGAACCGACAGTGTCAAAACTTAACTGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTTTGGGATACGCCACATaGTGTTCCATGATTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: EFLEVWKSVPLSVGNALILGYAT*CSMIDW Trigger: CCAGTCAATCATGGAACACAATGTGGCGTATCCCAA...AATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATTCCTTGGACATGGACTaGGGATACGCCACATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: QAKHTKKSPLRQALHMTDSLDMD*GYATLC Trigger: ACACAATGTGGCGTATCCCAAGTCCATGTCCAAGGA...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ATGAGTTTCTGGAAGTCTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTAAACTCTTTGTCGAAGTaGGAGGTGTCTCGCTTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: MSFWKSGKVYLYRWAMLLNSLSK*EVSRLS Trigger: AGACAAGCGAGACACCTCCAACTTCGACAAAGAGTT...TAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAGACTTCCAGAAACTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR CAA 90 bp | ATGACGGATGCCAATAGAGGCACCATGAATCCTGGAAGACTGGAATTGGTAACATTCATGATGAAGAGTTaGTCAGTGGGAGTCAGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: MTDANRGTMNPGRLELVTFMMKS*SVGVSS Trigger: GGAACTGACTCCCACTGACAAACTCTTCATCATGAA...TGTTACCAATTCCAGTCTTCCAGGATTCATGGTGCCTCTATTGGCATCCGTCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS-3UTR CAA 90 bp | CAAGCTAAACATACAAAGAAAAGCCCTCTAAGACAAGCTCTCCACATGACGGATATCTTAAACTTGTGTTaGCTCCGGGGGTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: QAKHTKKSPLRQALHMTDILNLC*LRGSSE Trigger: CTCTGATGACCCCCGGAGCAAACACAAGTTTAAGAT...ATCCGTCATGTGGAGAGCTTGTCTTAGAGGGCTTTTCTTTGTATGTTTAGCTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | TTCACCTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACGTGTGGATCTTAAACTaGTGTTTGCTCCGGGGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FTYTLMTNSGLVYEKPANVWILN*CLLRGS Trigger: TGACCCCCGGAGCAAACACAAGTTTAAGATCCACAC...GTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAGGTGAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGTGGAGCCTTGGTACCTaGGCCAATCTTGGCTCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: ILKQKVSSKRHEFTGTAKWSLGT*ANLGSL Trigger: GAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCA...CTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTGGAAAAGTGTACCTCTATCGGTGGGCAATGCTCTTATTCTAAACTAAACAGTTTGGGATACGCCACATaGTGTTCCATGATTGACTGG | + |
|
Preference number: 5 (lower is better) Translates to: LEKCTSIGGQCSYSKLNSLGYAT*CSMIDW Trigger: CCAGTCAATCATGGAACACAATGTGGCGTATCCCAA...ACTGTTTAGTTTAGAATAAGAGCATTGCCCACCGATAGAGGTACACTTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | CTACACATTAATGACAAACTCTGGGTTAGTATACGAGAAGCCAGCAAACTCATTTCCTTGGACATGGACTaGGGATACGCCACATTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LHINDKLWVSIREASKLISLDMD*GYATLC Trigger: ACACAATGTGGCGTATCCCAAGTCCATGTCCAAGGA...AATGAGTTTGCTGGCTTCTCGTATACTAACCCAGAGTTTGTCATTAATGTGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCAATTGCCACGGCTTCCTaGGACATGGACTTGGGATAC | + |
|
Preference number: 5 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSIATAS*DMDLGY Trigger: GTATCCCAAGTCCATGTCCAAGGAAGCCGTGGCAAT...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ACAAATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTCTCCACATCGTCATCTaGGATCACCACGTCCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TNTEAFWYWTQLSFDTVGLHIVI*DHHVLL Trigger: AAGAAGGACGTGGTGATCCAAGATGACGATGTGGAG...ACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATTTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCAATCTTAAACTTGTGTTaGCTCCGGGGGTCATCAGAG | + |
|
Preference number: 5 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSILNLC*LRGSSE Trigger: CTCTGATGACCCCCGGAGCAAACACAAGTTTAAGAT...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | ATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGGGATTGAGGGAACACTaGATGGTCTTGGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILKQKVSSKRHEFTGTAKGLREH*MVLVFC Trigger: ACAGAAGACCAAGACCATCAAGTGTTCCCTCAATCC...CTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | GAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATTGGATTCCCTGTTGCCATTGTaGTCAAATTTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: EAFWYWTQLSFDTVGSLDSLLPL*SNLEIV Trigger: CACTATCTCCAAATTTGACAACAATGGCAACAGGGA...ATCCAATGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACTGCAAAGCTTACTCCATTGTTGTCAAATTaGGAGATAGTGTTAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KQKVSSKRHEFTGTAKLTPLLSN*EIVLAV Trigger: GACAGCTAACACTATCTCCAAATTTGACAACAATGG...AGTAAGCTTTGCAGTTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGAAGCATTTTGGTATTGGACACAGTTAAGTTTTGACACTGTCGGTTCATCCCTGTTGCCATTGTaGTCAAATTTGGAGATAGTG | + |
|
Preference number: 5 (lower is better) Translates to: NTEAFWYWTQLSFDTVGSSLLPL*SNLEIV Trigger: CACTATCTCCAAATTTGACAACAATGGCAACAGGGA...TGAACCGACAGTGTCAAAACTTAACTGTGTCCAATACCAAAATGCTTCAGTATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS-3UTR CAA 90 bp | TCATACCAATTCTTAAACAAAAAGTTTCCTCCAAGAGACACGAATTCACAGGAACGGTCCCTGTTGCCATaGTTGTCAAATTTGGAGATA | + |
|
Preference number: 5 (lower is better) Translates to: SYQFLNKKFPPRDTNSQERSLLP*LSNLEI Trigger: TATCTCCAAATTTGACAACAATGGCAACAGGGACCG...TTCCTGTGAATTCGTGTCTCTTGGAGGAAACTTTTTGTTTAAGAATTGGTATGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000064921.5 ENSMUST00000143692.8 |
||
| CDS CCA 90 bp | TTTAAAAATTCAGAGTTAACAAAGGAAAATCCTTCGAATTCTGATTaGTCAATATTCCTGATGACTTCCTGGTCAGGAGGTGTTAGGACT | + |
|
Preference number: 5 (lower is better) Translates to: FKNSELTKENPSNSD*SIFLMTSWSGGVRT Trigger: AGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGAATTTTTAAA 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | TTGTGTTTGCTCCGGGGGTCATCAGAGGCCGGGCCCTaGTCCGCACCGGGGCAGGAGAACGTGACGAACTCA | + |
|
Preference number: 6 (lower is better) Translates to: LCLLRGSSEAGP*SAPGQENVTNS Trigger: TGAGTTCGTCACGTTCTCCTGCCCCGGTGCGGACAAGGGCCCGGCCTCTGATGACCCCCGGAGCAAACACAA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS TCA 72 bp | AGGCCGGGCCCTTGTCCGCACCGGGGCAGGAGAACGTaGCGAACTCATGGCAGCGCTTGTGTACAACAAAGC | + |
|
Preference number: 6 (lower is better) Translates to: RPGPCPHRGRRT*RTHGSACVQQS Trigger: GCTTTGTTGTACACAAGCGCTGCCATGAGTTCGTCACGTTCTCCTGCCCCGGTGCGGACAAGGGCCCGGCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 90 bp | TCACAGAAGGTAGGACTGGAGTACGTGTGGATCTTAAACTTGTGTTaGCTCCGGGGGTCATCAGAGGCCGGGCCCTTGTCCGCACCGGGG | + |
|
Preference number: 6 (lower is better) Translates to: SQKVGLEYVWILNLC*LRGSSEAGPLSAPG Trigger: CCCCGGTGCGGACAAGGGCCCGGCCTCTGATGACCCCCGGAGCAAACACAAGTTTAAGATCCACACGTACTCCAGTCCTACCTTCTGTGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 90 bp | CAGTGGTCACAGAAGGTAGGACTGGAGTACGTGTGGATCTTAAACTaGTGTTTGCTCCGGGGGTCATCAGAGGCCGGGCCCTTGTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: QWSQKVGLEYVWILN*CLLRGSSEAGPLSA Trigger: TGCGGACAAGGGCCCGGCCTCTGATGACCCCCGGAGCAAACACAAGTTTAAGATCCACACGTACTCCAGTCCTACCTTCTGTGACCACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS TCA 72 bp | CCTGGTCAGGAGGTGTTAGGACTGGTGGATGGCGGGTaGAAAACCGGTCGAAGTTTTCAGCGTTTCGCCCAC | + |
|
Preference number: 6 (lower is better) Translates to: PGQEVLGLVDGG*KTGRSFQRFAH Trigger: GTGGGCGAAACGCTGAAAACTTCGACCGGTTTTTCACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | GTAGGACTGGAGTACGTGTGGATCTTAAACTTGTGTTaGCTCCGGGGGTCATCAGAGGCCGGGCCCTTGTCC | + |
|
Preference number: 6 (lower is better) Translates to: VGLEYVWILNLC*LRGSSEAGPLS Trigger: GGACAAGGGCCCGGCCTCTGATGACCCCCGGAGCAAACACAAGTTTAAGATCCACACGTACTCCAGTCCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | CAGAAGGTAGGACTGGAGTACGTGTGGATCTTAAACTaGTGTTTGCTCCGGGGGTCATCAGAGGCCGGGCCC | + |
|
Preference number: 6 (lower is better) Translates to: QKVGLEYVWILN*CLLRGSSEAGP Trigger: GGGCCCGGCCTCTGATGACCCCCGGAGCAAACACAAGTTTAAGATCCACACGTACTCCAGTCCTACCTTCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 90 bp | CCTTGGCCAATCTTGGCTCTCTCAAACTTCTGCCGCAGCTCTTCATaGCCCTCGCTTCCTTCGGGCGGCACGGGCACATTGAAGTATTCA | + |
|
Preference number: 6 (lower is better) Translates to: PWPILALSNFCRSSS*PSLPSGGTGTLKYS Trigger: TGAATACTTCAATGTGCCCGTGCCGCCCGAAGGAAGCGAGGGCAATGAAGAGCTGCGGCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS GCA 72 bp | CTTGCTCTGCAAGAAGAACAGACCGATGGCAATCTCTaGGGCGTAAAATACAGCATGGGGCTCCTTGAAACG | + |
|
Preference number: 6 (lower is better) Translates to: LALQEEQTDGNL*GVKYSMGLLET Trigger: CGTTTCAAGGAGCCCCATGCTGTATTTTACGCCGCAGAGATTGCCATCGGTCTGTTCTTCTTGCAGAGCAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CCA 72 bp | GTGTTAGCTGTCTTTTCTTCTGGAGCCTTGGTACCTTaGCCAATCTTGGCTCTCTCAAACTTCTGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: VLAVFSSGALVP*PILALSNFCRS Trigger: GCTGCGGCAGAAGTTTGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCTAACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CCA 72 bp | ATGACTTCCTGGTCAGGAGGTGTTAGGACTGGTGGATaGCGGGTGAAAAACCGGTCGAAGTTTTCAGCGTTT | + |
|
Preference number: 6 (lower is better) Translates to: MTSWSGGVRTGG*RVKNRSKFSAF Trigger: AAACGCTGAAAACTTCGACCGGTTTTTCACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGGAAGTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CAA 90 bp | GGCACGGGCACATTGAAGTATTCACCCTCTTCCTGGCTTAGTAACTaGAACCAGCCATCCACACCGGCTTTCTGTAGTTCTGAAATCCCA | + |
|
Preference number: 6 (lower is better) Translates to: GTGTLKYSPSSWLSN*NQPSTPAFCSSEIP Trigger: TGGGATTTCAGAACTACAGAAAGCCGGTGTGGATGGCTGGTTCAAGTTACTAAGCCAGGAAGAGGGTGAATACTTCAATGTGCCCGTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CCA 72 bp | CCGGTCGAAGTTTTCAGCGTTTCGCCCACAAGCTTTTaGTTTATAAGGTGGCTGAATCTCCTTGCGTTCGAG | + |
|
Preference number: 6 (lower is better) Translates to: PVEVFSVSPTSF*FIRWLNLLAFE Trigger: CTCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTTGTGGGCGAAACGCTGAAAACTTCGACCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CCA 72 bp | TCGAATTCTGATTGGTCAATATTCCTGATGACTTCCTaGTCAGGAGGTGTTAGGACTGGTGGATGGCGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SNSDWSIFLMTS*SGGVRTGGWRV Trigger: CACCCGCCATCCACCAGTCCTAACACCTCCTGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CCA 72 bp | GGTGTCTCGCTTGTCTCTAGCTTTTGGTTTATAAGGTaGCTGAATCTCCTTGCGTTCGAGTTTCTCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: GVSLVSSFWFIR*LNLLAFEFLPV Trigger: GACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTAGAGACAAGCGAGACACC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS CCA 72 bp | TTCAGCGTTTCGCCCACAAGCTTTTGGTTTATAAGGTaGCTGAATCTCCTTGCGTTCGAGTTTCTCCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: FSVSPTSFWFIR*LNLLAFEFLPV Trigger: GACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTTGTGGGCGAAACGCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CAA 72 bp | AGTTCCACAGGCTGCCTGGTGAACTCTTTGTCGAAGTaGGAGGTGTCTCGCTTGTCTCTAGCTTTTGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SSTGCLVNSLSK*EVSRLSLAFGL Trigger: TAAACCAAAAGCTAGAGACAAGCGAGACACCTCCAACTTCGACAAAGAGTTCACCAGGCAGCCTGTGGAACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000064921.5 |
||
| CDS CAA 72 bp | ACCGGTCGAAGTTTTCAGCGTTTCGCCCACAAGCTTTaGGTTTATAAGGTGGCTGAATCTCCTTGCGTTCGA | + |
|
Preference number: 6 (lower is better) Translates to: TGRSFQRFAHKL*VYKVAESPCVR Trigger: TCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTTGTGGGCGAAACGCTGAAAACTTCGACCGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CAA 72 bp | ACATTGAAGTATTCACCCTCTTCCTGGCTTAGTAACTaGAACCAGCCATCCACACCGGCTTTCTGTAGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: TLKYSPSSWLSN*NQPSTPAFCSS Trigger: AGAACTACAGAAAGCCGGTGTGGATGGCTGGTTCAAGTTACTAAGCCAGGAAGAGGGTGAATACTTCAATGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CAA 72 bp | TTGGAGATAGTGTTAGCTGTCTTTTCTTCTGGAGCCTaGGTACCTTGGCCAATCTTGGCTCTCTCAAACTTC | + |
|
Preference number: 6 (lower is better) Translates to: LEIVLAVFSSGA*VPWPILALSNF Trigger: GAAGTTTGAGAGAGCCAAGATTGGCCAAGGTACCAAGGCTCCAGAAGAAAAGACAGCTAACACTATCTCCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS CAA 90 bp | AGGAAGTTAAAATCGGTCAGTTTCATCCGGTCCCTGTTGCCATTGTaGTCAAATTTGGAGATAGTGTTAGCTGTCTTTTCTTCTGGAGCC | + |
|
Preference number: 6 (lower is better) Translates to: RKLKSVSFIRSLLPL*SNLEIVLAVFSSGA Trigger: GGCTCCAGAAGAAAAGACAGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAACTTCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
||
| CDS GCA 72 bp | CACAAGCTTTTGGTTTATAAGGTGGCTGAATCTCCTTaGGTTCGAGTTTCTCCCAGTCAATATACCGGAAAA | + |
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Preference number: 6 (lower is better) Translates to: HKLLVYKVAESP*VRVSPSQYTGK Trigger: TTTTCCGGTATATTGACTGGGAGAAACTCGAACGCAAGGAGATTCAGCCACCTTATAAACCAAAAGCTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 90 bp | AGCACCATCAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCCCTGTaGCCATTGTTGTCAAATTTGGAGATAGTGTTAGCTGTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: STIRKLKSVSFIRSL*PLLSNLEIVLAVFS Trigger: AGAAAAGACAGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAACTTCCTGATGGTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | AAATCGGTCAGTTTCATCCGGTCCCTGTTGCCATTGTaGTCAAATTTGGAGATAGTGTTAGCTGTCTTTTCT | + |
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Preference number: 6 (lower is better) Translates to: KSVSFIRSLLPL*SNLEIVLAVFS Trigger: AGAAAAGACAGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | AGGAAGTTAAAATCGGTCAGTTTCATCCGGTCCCTGTaGCCATTGTTGTCAAATTTGGAGATAGTGTTAGCT | + |
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Preference number: 6 (lower is better) Translates to: RKLKSVSFIRSL*PLLSNLEIVLA Trigger: AGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAACTTCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 90 bp | ATCAGGAAGTTAAAATCGGTCAGTTTCATCCGGTCCCTGTTGCCATaGTTGTCAAATTTGGAGATAGTGTTAGCTGTCTTTTCTTCTGGA | + |
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Preference number: 6 (lower is better) Translates to: IRKLKSVSFIRSLLP*LSNLEIVLAVFSSG Trigger: TCCAGAAGAAAAGACAGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAACTTCCTGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CCA 72 bp | TCAGAGTTAACAAAGGAAAATCCTTCGAATTCTGATTaGTCAATATTCCTGATGACTTCCTGGTCAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: SELTKENPSNSD*SIFLMTSWSGG Trigger: ACCTCCTGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS CAA 72 bp | TTAAAATCGGTCAGTTTCATCCGGTCCCTGTTGCCATaGTTGTCAAATTTGGAGATAGTGTTAGCTGTCTTT | + |
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Preference number: 6 (lower is better) Translates to: LKSVSFIRSLLP*LSNLEIVLAVF Trigger: AAAGACAGCTAACACTATCTCCAAATTTGACAACAATGGCAACAGGGACCGGATGAAACTGACCGATTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000064921.5 ENSMUST00000064989.12 ENSMUST00000143692.8 |
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| CDS TCA 72 bp | AAATTCAGAGTTAACAAAGGAAAATCCTTCGAATTCTaGTTGGTCAATATTCCTGATGACTTCCTGGTCAGG | + |
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Preference number: 6 (lower is better) Translates to: KFRVNKGKSFEF*LVNIPDDFLVR Trigger: CCTGACCAGGAAGTCATCAGGAATATTGACCAATCAGAATTCGAAGGATTTTCCTTTGTTAACTCTGAATTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000064989.12 ENSMUST00000143692.8 |
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