Pregenerated sensors for PRKAR2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000002997Ensembl transcript IDs: ENSMUST00000003079.12, ENSMUST00000036497.16, ENSMUST00000146865.2
Found 100 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AGTTTGGAAAACAAAACCACACTTGATTGGCTACTGATCAATCAATaGGCTTGCTGGTTGACGTTCAGGACAAGGAAGAACAGAGGACTG | + |
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Preference number: 1 (lower is better) Translates to: SLENKTTLDWLLINQ*ACWLTFRTRKNRGL Trigger: CAGTCCTCTGTTCTTCCTTGTCCTGAACGTCAACCAGCAAGCTCATTGATTGATCAGTAGCCAATCAAGTGTGGTTTTGTTTTCCAAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR CCA 90 bp | TGGAATCACAGAAACTGCTTGGCATCTCCACAAACACATTCTCAGTaGACTAACCACTACTACGGAACTGTTTCACTAATGGTCTTCTTC | + |
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Preference number: 1 (lower is better) Translates to: WNHRNCLASPQTHSQ*TNHYYGTVSLMVFF Trigger: GAAGAAGACCATTAGTGAAACAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGGAGATGCCAAGCAGTTTCTGTGATTCCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR TCA 90 bp | AACTTACCCGGCCTCCAAAGCCACTCGATTACACAGGCTGCTGACTaGCATTTGTCAAAGAAGTTGAAATGTACTTTATTGCAAAAATAT | + |
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Preference number: 1 (lower is better) Translates to: NLPGLQSHSITQAAD*HLSKKLKCTLLQKY Trigger: ATATTTTTGCAATAAAGTACATTTCAACTTCTTTGACAAATGTCAGTCAGCAGCCTGTGTAATCGAGTGGCTTTGGAGGCCGGGTAAGTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR TCA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCACACAGGCTGCTGACTaGCATTTGTCAAAGAAGTTG | + |
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Preference number: 2 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGTQAAD*HLSKKL Trigger: CAACTTCTTTGACAAATGTCAGTCAGCAGCCTGTGT...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCCTTACAGAGCAAAGCCATGATTACACAGGCTGCTaGCTGACATTTGTCAAAGAA | + |
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Preference number: 2 (lower is better) Translates to: WAQTRTGLRPSGLTEQSHDYTGC*LTFVKE Trigger: TTCTTTGACAAATGTCAGTCAGCAGCCTGTGTAATC...ATGGCTTTGCTCTGTAAGGCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR GCA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCGTTAAGAATCCCAAATaGCTCTTGATACTGACAGGA | + |
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Preference number: 2 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGVKNPK*LLILTG Trigger: TCCTGTCAGTATCAAGAGGCATTTGGGATTCTTAAC...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR GCA 90 bp | CTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGCCAACGTTCAGCCTCTaGAATGCAACCTGGGAAACT | + |
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Preference number: 2 (lower is better) Translates to: LNRTELAFIAEAFISCSVPTFSL*NATWET Trigger: AGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG...CACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR CCA 90 bp | CGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGCAAACACATTCTCAGTaGACTAACCACTACTACGGA | + |
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Preference number: 2 (lower is better) Translates to: RQRSASAMQPGKLRKEDRQTHSQ*TNHYYG Trigger: TCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTG...CCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR TCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCTGCAACCTGGGAAACTaGGGAAAGAAGACAGGGGGA | + |
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Preference number: 2 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFCNLGN*GKKTGG Trigger: TCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCA...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR CCA 90 bp | ACAATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTCTCTGCAATGCAACCTaGGAAACTGAGGAAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: TILNRTELAFIAEAFISCLCNAT*ETEERR Trigger: TCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAG...ACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR GCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCTGGAATCACAGAAACTaGTTGGCATCTCCACAAACA | + |
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Preference number: 2 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFWNHRN*LASPQT Trigger: TGTTTGTGGAGATGCCAAGCAGTTTCTGTGATTCCA...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR CCA 72 bp | TGGTTGACGTTCAGGACAAGGAAGAACAGAGGACTGTaGGCACAGACACGCACAGGGCTGCGGCCCTCGGGC | + |
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Preference number: 3 (lower is better) Translates to: WLTFRTRKNRGL*AQTRTGLRPSG Trigger: GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCTTGTCCTGAACGTCAACCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR GCA 72 bp | AGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTaGGGCCCTCGGGCCTTACAGAGCAAAGCCATATCT | + |
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Preference number: 3 (lower is better) Translates to: RTEDCGHRHAQG*GPRALQSKAIS Trigger: AGATATGGCTTTGCTCTGTAAGGCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR CAA 90 bp | TGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCCTTACAGAGCAAAGCCATAATCACAGAAACTGCTaGGCATCTCCACAAACACAT | + |
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Preference number: 3 (lower is better) Translates to: WAQTRTGLRPSGLTEQSHNHRNC*ASPQTH Trigger: ATGTGTTTGTGGAGATGCCAAGCAGTTTCTGTGATT...ATGGCTTTGCTCTGTAAGGCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR CAA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTAGTGAGAAGATAGAGTaGATAGTGAAAGATGCCAGT | + |
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Preference number: 3 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRSEKIE*IVKDAS Trigger: ACTGGCATCTTTCACTATCAACTCTATCTTCTCACT...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR-3UTR CAA 90 bp | ACAATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTAATCACAGAAACTGCTaGGCATCTCCACAAACACAT | + |
|
Preference number: 3 (lower is better) Translates to: TILNRTELAFIAEAFISCNHRNC*ASPQTH Trigger: ATGTGTTTGTGGAGATGCCAAGCAGTTTCTGTGATT...ACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR TCA 72 bp | GGCCTCCAAAGCCACTCGATTACACAGGCTGCTGACTaGCATTTGTCAAAGAAGTTGAAATGTACTTTATTG | + |
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Preference number: 3 (lower is better) Translates to: GLQSHSITQAAD*HLSKKLKCTLL Trigger: CAATAAAGTACATTTCAACTTCTTTGACAAATGTCAGTCAGCAGCCTGTGTAATCGAGTGGCTTTGGAGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR TCA 72 bp | AACAAAACCACACTTGATTGGCTACTGATCAATCAATaGGCTTGCTGGTTGACGTTCAGGACAAGGAAGAAC | + |
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Preference number: 3 (lower is better) Translates to: NKTTLDWLLINQ*ACWLTFRTRKN Trigger: GTTCTTCCTTGTCCTGAACGTCAACCAGCAAGCTCATTGATTGATCAGTAGCCAATCAAGTGTGGTTTTGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR TCA 72 bp | ACCACTGTAGGAGAGTTTGGAAAACAAAACCACACTTaGTTGGCTACTGATCAATCAATGAGCTTGCTGGTT | + |
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Preference number: 3 (lower is better) Translates to: TTVGEFGKQNHT*LATDQSMSLLV Trigger: AACCAGCAAGCTCATTGATTGATCAGTAGCCAATCAAGTGTGGTTTTGTTTTCCAAACTCTCCTACAGTGGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| 3UTR GCA 72 bp | GCCATATCTTGTGGGCATGTGGTTAAGAATCCCAAATaGCTCTTGATACTGACAGGAAACATTTCCTTTTTC | + |
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Preference number: 3 (lower is better) Translates to: AISCGHVVKNPK*LLILTGNISFF Trigger: GAAAAAGGAAATGTTTCCTGTCAGTATCAAGAGGCATTTGGGATTCTTAACCACATGCCCACAAGATATGGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR CCA 90 bp | CGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGCAGGTCCTGCCCTCATaGCCGAAGCGCGCGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: RQRSASAMQPGKLRKEDRQVLPS*PKRAAP Trigger: GGGCGCCGCGCGCTTCGGCCATGAGGGCAGGACCTG...CCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR TCA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCAAACCTCTAGAGACTTaGGGAACGGCAGGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGKPLET*GTAGTR Trigger: TCGAGTCCCTGCCGTTCCTCAAGTCTCTAGAGGTTT...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR TCA 90 bp | TGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCCTTACAGAGCAAAGCCATAAACCTCTAGAGACTTaGGGAACGGCAGGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: WAQTRTGLRPSGLTEQSHKPLET*GTAGTR Trigger: TCGAGTCCCTGCCGTTCCTCAAGTCTCTAGAGGTTT...ATGGCTTTGCTCTGTAAGGCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR CCA 90 bp | CTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGCAGGTCCTGCCCTCATaGCCGAAGCGCGCGGCGCCC | + |
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Preference number: 4 (lower is better) Translates to: LNRTELAFIAEAFISCSVQVLPS*PKRAAP Trigger: GGGCGCCGCGCGCTTCGGCCATGAGGGCAGGACCTG...CACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCCGCTCGTTCTCCTGCTaGAGCCGCGTGAAGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSRSFSC*SRVKCC Trigger: GCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCG...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR TCA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACCCTGCTGCAGCCGCGTaGAGTGCTGCAGCGCGAACT | + |
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Preference number: 4 (lower is better) Translates to: ERQRSASAMQPGKLRKEDPAAAA*SAAART Trigger: AGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGG...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR TCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCGCTCCTCGGCGAAGTTaGCACCCTTACTGGGGATGC | + |
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Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSAPRRS*HPYWGC Trigger: GCATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGC...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | CGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGAGCCGCGTGAAGTGCTaGAGCGCGAACTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RQRSASAMQPGKLRKEDRSRVKC*SANSSR Trigger: CCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCT...CCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCTTGCGCTCGTTCTCCTaGTGCAGCCGCGTGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSLRSFS*CSRVKC Trigger: GCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAA...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCATGGCATCTAAAACTTaGGACATCTGCTCTGGATCC | + |
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Preference number: 4 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGMASKT*DICSGS Trigger: GGATCCAGAGCAGATGTCCCAAGTTTTAGATGCCAT...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000036497.16 |
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| CDS-3UTR TCA 90 bp | CTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGCCTGCTGCAGCCGCGTaGAGTGCTGCAGCGCGAACT | + |
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Preference number: 4 (lower is better) Translates to: LNRTELAFIAEAFISCSVPAAAA*SAAART Trigger: AGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGG...CACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | GCTTGGCATCTCCACAAACACATTCTCAGTGGACTAACCACTACTACGGAACTGAGGTCGGCGGGCTGGTaGCTCAGCACCTCCACCGTG | + |
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Preference number: 4 (lower is better) Translates to: AWHLHKHILSGLTTTTELRSAGW*LSTSTV Trigger: CACGGTGGAGGTGCTGAGGCACCAGCCCGCCGACCT...CAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGGAGATGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTAGCGCGCGGCGCCCTTaGGCTCGTTCTCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRSARRP*ARSPAA Trigger: TGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCT...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | GCTTGGCATCTCCACAAACACATTCTCAGTGGACTAACCACTACTACGGAACTGAGCGCGCGGCGCCCTTaGGCTCGTTCTCCTGCTGCA | + |
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Preference number: 4 (lower is better) Translates to: AWHLHKHILSGLTTTTELSARRP*ARSPAA Trigger: TGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCT...CAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGGAGATGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCCATTGTAAACTTTGGTaGCAATCACATCCACCACCT | + |
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Preference number: 4 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGHCKLW*QSHPPP Trigger: AGGTGGTGGATGTGATTGGCACCAAAGTTTACAATG...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR CCA 90 bp | GCTTGGCATCTCCACAAACACATTCTCAGTGGACTAACCACTACTACGGAACTGAGCAGGTCGGCGGGCTaGTGCCTCAGCACCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: AWHLHKHILSGLTTTTELSRSAG*CLSTST Trigger: GGTGGAGGTGCTGAGGCACCAGCCCGCCGACCTGCT...CAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTGTGGAGATGCCAAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | CTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGAGCCGCGTGAAGTGCTaGAGCGCGAACTCCAGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LNRTELAFIAEAFISCSVSRVKC*SANSSR Trigger: CCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCT...CACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR GCA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACTTGCGCTCGTTCTCCTaGTGCAGCCGCGTGAAGTGC | + |
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Preference number: 4 (lower is better) Translates to: ERQRSASAMQPGKLRKEDLRSFS*CSRVKC Trigger: GCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAA...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCAGCAGGTCGGCGGGCTaGTGCCTCAGCACCTCCACC | + |
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Preference number: 4 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFSRSAG*CLSTST Trigger: GGTGGAGGTGCTGAGGCACCAGCCCGCCGACCTGCT...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCGAACCGGTTTATAACTaGAGCGTTGAACGCCCCTGC | + |
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Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSEPVYN*SVERPC Trigger: GCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTC...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGCTCTCCAAAGTACTaGCCCCGAAAGCACCGAGCG | + |
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Preference number: 4 (lower is better) Translates to: ERQRSASAMQPGKLRKEDSSPKY*PRKHRA Trigger: CGCTCGGTGCTTTCGGGGCCAGTACTTTGGAGAGCT...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR CCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCTGCAGACGCTGCTCTTaGTTTGTTAGTGACCAGGGC | + |
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Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSCRRCS*FVSDQG Trigger: GCCCTGGTCACTAACAAACCAAGAGCAGCGTCTGCA...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR TCA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGAAACCTCTAGAGACTTaGGGAACGGCAGGGACTCGA | + |
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Preference number: 4 (lower is better) Translates to: PTFSLCNATWETEERRQGKPLET*GTAGTR Trigger: TCGAGTCCCTGCCGTTCCTCAAGTCTCTAGAGGTTT...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS-3UTR CCA 90 bp | CTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGAGCTCTCCAAAGTACTaGCCCCGAAAGCACCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LNRTELAFIAEAFISCSVSSPKY*PRKHRA Trigger: CGCTCGGTGCTTTCGGGGCCAGTACTTTGGAGAGCT...CACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCTGGGATGTATTATCCTaGACTCTGCATCGTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSWDVLS*TLHRLP Trigger: AGGAAGACGATGCAGAGTCCAGGATAATACATCCCA...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCATGGCATCTAAAACTTaGGACATCTGCTCTGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSMASKT*DICSGS Trigger: GGATCCAGAGCAGATGTCCCAAGTTTTAGATGCCAT...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR GCA 90 bp | TTCTTGTTTTTCTGTTTTGGGAATTGTTCCTCCTTTAACACAGAGCTTCTGAACAGGTCGGCGGGCTGGTaGCTCAGCACCTCCACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: FLFFCFGNCSSFNTELLNRSAGW*LSTSTV Trigger: CACGGTGGAGGTGCTGAGGCACCAGCCCGCCGACCT...GTTCAGAAGCTCTGTGTTAAAGGAGGAACAATTCCCAAAACAGAAAAACAAGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGTTGGGACATCTGCTCTaGATCCAGGTTCTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PTFSLCNATWETEERRQGLGHLL*IQVLKQ Trigger: CTGTTTAAGAACCTGGATCCAGAGCAGATGTCCCAA...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR TCA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGATGTTCCTCTGTCAATaGCGTAAAAGTTGTCACCGT | + |
|
Preference number: 4 (lower is better) Translates to: PTFSLCNATWETEERRQGMFLCQ*RKSCHR Trigger: ACGGTGACAACTTTTACGTCATTGACAGAGGAACAT...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR TCA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCCTCCAGATTCTACAATaGAGAAAGAGTCTGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: RSASAMQPGKLRKEDRGSLQILQ*RKSLPN Trigger: ATTTGGCAGACTCTTTCTTCATTGTAGAATCTGGAG...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR GCA 90 bp | CGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGCATTGTAAACTTTGGTaGCAATCACATCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: RQRSASAMQPGKLRKEDRHCKLW*QSHPPP Trigger: AGGTGGTGGATGTGATTGGCACCAAAGTTTACAATG...CCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CCA 90 bp | CAAACACATTCTCAGTGGACTAACCACTACTACGGAACTGTTTCACTAATGGTCAGCTCTCCAAAGTACTaGCCCCGAAAGCACCGAGCG | + |
|
Preference number: 4 (lower is better) Translates to: QTHSQWTNHYYGTVSLMVSSPKY*PRKHRA Trigger: CGCTCGGTGCTTTCGGGGCCAGTACTTTGGAGAGCT...GACCATTAGTGAAACAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCTGCAGACGCTGCTCTTaGTTTGTTAGTGACCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFCRRCS*FVSDQG Trigger: GCCCTGGTCACTAACAAACCAAGAGCAGCGTCTGCA...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTTTTTCTGTTTTGGGAATTGTTCCTCCTTTAACACAGAGCTTCTGAACGCTCCTCGGCGAAGTTaGCACCCTTACTGGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FLFFCFGNCSSFNTELLNAPRRS*HPYWGC Trigger: GCATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGC...GTTCAGAAGCTCTGTGTTAAAGGAGGAACAATTCCCAAAACAGAAAAACAAGAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR TCA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACCTCCAGATTCTACAATaGAGAAAGAGTCTGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: ERQRSASAMQPGKLRKEDLQILQ*RKSLPN Trigger: ATTTGGCAGACTCTTTCTTCATTGTAGAATCTGGAG...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTACAGCAGGATGTCTTTaGAAGCCTCTTGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRTAGCL*KPLAIC Trigger: ACAGATTGCAAGAGGCTTGCAAAGACATCCTGCTGT...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CCA 90 bp | CAAACACATTCTCAGTGGACTAACCACTACTACGGAACTGTTTCACTAATGGTCTGCAGACGCTGCTCTTaGTTTGTTAGTGACCAGGGC | + |
|
Preference number: 4 (lower is better) Translates to: QTHSQWTNHYYGTVSLMVCRRCS*FVSDQG Trigger: GCCCTGGTCACTAACAAACCAAGAGCAGCGTCTGCA...GACCATTAGTGAAACAGTTCCGTAGTAGTGGTTAGTCCACTGAGAATGTGTTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR GCA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTCATTGTAAACTTTGGTaGCAATCACATCCACCACCT | + |
|
Preference number: 4 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRHCKLW*QSHPPP Trigger: AGGTGGTGGATGTGATTGGCACCAAAGTTTACAATG...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR GCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCACAGCAGGATGTCTTTaGAAGCCTCTTGCAATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFTAGCL*KPLAIC Trigger: ACAGATTGCAAGAGGCTTGCAAAGACATCCTGCTGT...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CCA 90 bp | ACAATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTTGGGACATCTGCTCTaGATCCAGGTTCTTAAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TILNRTELAFIAEAFISCLGHLL*IQVLKQ Trigger: CTGTTTAAGAACCTGGATCCAGAGCAGATGTCCCAA...ACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATTGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CCA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACCCAATTTTTCAAACATaGCATCTAAAACTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ERQRSASAMQPGKLRKEDPIFQT*HLKLGT Trigger: TGTCCCAAGTTTTAGATGCCATGTTTGAAAAATTGG...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CCA 90 bp | ACAATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTCCAATTTTTCAAACATaGCATCTAAAACTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: TILNRTELAFIAEAFISCPIFQT*HLKLGT Trigger: TGTCCCAAGTTTTAGATGCCATGTTTGAAAAATTGG...ACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATTGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CCA 90 bp | AATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCCAATTTTTCAAACATaGCATCTAAAACTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: NTEQNRAGIHSRGIHFLFPIFQT*HLKLGT Trigger: TGTCCCAAGTTTTAGATGCCATGTTTGAAAAATTGG...GAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR TCA 90 bp | TTCTTGTTTTTCTGTTTTGGGAATTGTTCCTCCTTTAACACAGAGCTTCTGAACCTCCAGATTCTACAATaGAGAAAGAGTCTGCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: FLFFCFGNCSSFNTELLNLQILQ*RKSLPN Trigger: ATTTGGCAGACTCTTTCTTCATTGTAGAATCTGGAG...GTTCAGAAGCTCTGTGTTAAAGGAGGAACAATTCCCAAAACAGAAAAACAAGAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS TCA 90 bp | CGAAGCGCGCGGCGCCCTTGCGCTCGTTCTCCTGCTGCAGCCGCGTaGAGTGCTGCAGCGCGAACTCCAGCAGGTCGGCGGGCTGGTGCC | + |
|
Preference number: 5 (lower is better) Translates to: RSARRPCARSPAAAA*SAAARTPAGRRAGA Trigger: GGCACCAGCCCGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTTCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS TCA 90 bp | CCTCGCCGTTCTCGGAGTCGGAGCGCATGGGCTCCTCGGCGAAGTTaGCACCCTTACTGGGGATGCCGCCCCCGGCGGCTGCGCCCGCGT | + |
|
Preference number: 5 (lower is better) Translates to: PRRSRSRSAWAPRRS*HPYWGCRPRRLRPR Trigger: ACGCGGGCGCAGCCGCCGGGGGCGGCATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGCCCATGCGCTCCGACTCCGAGAACGGCGAGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 90 bp | CGCGCGGCGCCCTTGCGCTCGTTCTCCTGCTGCAGCCGCGTGAAGTaGTGCAGCGCGAACTCCAGCAGGTCGGCGGGCTGGTGCCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RAAPLRSFSCCSRVK*CSANSSRSAGWCLS Trigger: GCTGAGGCACCAGCCCGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 90 bp | GCGGCGCCCTTGCGCTCGTTCTCCTGCTGCAGCCGCGTGAAGTGCTaGAGCGCGAACTCCAGCAGGTCGGCGGGCTGGTGCCTCAGCACC | + |
|
Preference number: 5 (lower is better) Translates to: AAPLRSFSCCSRVKC*SANSSRSAGWCLST Trigger: GGTGCTGAGGCACCAGCCCGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 90 bp | CCCTCATGGCCGAAGCGCGCGGCGCCCTTGCGCTCGTTCTCCTGCTaGAGCCGCGTGAAGTGCTGCAGCGCGAACTCCAGCAGGTCGGCG | + |
|
Preference number: 5 (lower is better) Translates to: PSWPKRAAPLRSFSC*SRVKCCSANSSRSA Trigger: CGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTTCGGCCATGAGGG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 90 bp | CTGCCCTCATGGCCGAAGCGCGCGGCGCCCTTGCGCTCGTTCTCCTaGTGCAGCCGCGTGAAGTGCTGCAGCGCGAACTCCAGCAGGTCG | + |
|
Preference number: 5 (lower is better) Translates to: LPSWPKRAAPLRSFS*CSRVKCCSANSSRS Trigger: CGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTTCGGCCATGAGGGCAG 70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 90 bp | GGCACGCCTTGTGAACCGGTTTATAACTGGAGCGTTGAACGCCCCTaGTTCCGCGGCCTCCTCCTCCTCGCCGTTCTCGGAGTCGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: GTPCEPVYNWSVERP*FRGLLLLAVLGVGA Trigger: CGCTCCGACTCCGAGAACGGCGAGGAGGAGGAGGCCGCGGAAGCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTCACAAGGCGTGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CCA 90 bp | AGCTTCTGCACAGACCGAGGCACGCCTTGTGAACCGGTTTATAACTaGAGCGTTGAACGCCCCTGCTTCCGCGGCCTCCTCCTCCTCGCC | + |
|
Preference number: 5 (lower is better) Translates to: SFCTDRGTPCEPVYN*SVERPCFRGLLLLA Trigger: GGCGAGGAGGAGGAGGCCGCGGAAGCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTCACAAGGCGTGCCTCGGTCTGTGCAGAAGCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAAGCGCGCGGCGCCCTaGCGCTCGTTCTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ERQRSASAMQPGKLRKEDKRAAP*RSFSCC Trigger: GCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTT...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CAA 90 bp | AGGAAGAACAGAGGACTGTGGGCACAGACACGCACAGGGCTGCGGCCCTCGGGCAACAGCAGGATGTCTTaGCAAGCCTCTTGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: RKNRGLWAQTRTGLRPSGNSRMS*QASCNL Trigger: CAGATTGCAAGAGGCTTGCAAAGACATCCTGCTGTT...GCCCGAGGGCCGCAGCCCTGTGCGTGTCTGTGCCCACAGTCCTCTGTTCTTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTAAGCGCGCGGCGCCCTaGCGCTCGTTCTCCTGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRKRAAP*RSFSCC Trigger: GCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTT...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGGCTCCTCGGCGAAGTaGACACCCTTACTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: PTFSLCNATWETEERRQGGSSAK*TPLLGM Trigger: CATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGCC...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 57% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | ACAATACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTGGCTCCTCGGCGAAGTaGACACCCTTACTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: TILNRTELAFIAEAFISCGSSAK*TPLLGM Trigger: CATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGCC...ACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGTATTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGAACAGCAGGATGTCTTaGCAAGCCTCTTGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTFSLCNATWETEERRQGNSRMS*QASCNL Trigger: CAGATTGCAAGAGGCTTGCAAAGACATCCTGCTGTT...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CAA 90 bp | CCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGTCTTTGCAAGCCTCTaGCAATCTGTTTCTCTGATC | + |
|
Preference number: 5 (lower is better) Translates to: PTFSLCNATWETEERRQGVFASL*QSVSLI Trigger: GATCAGAGAAACAGATTGCAAGAGGCTTGCAAAGAC...CCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS-3UTR CAA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: ERQRSASAMQPGKLRKEDAALGV*YIKASS Trigger: AGAACTGGCCTTAATGTACAATACACCCAGAGCAGC...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CAA 90 bp | CGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGGGGAGCCAACAATATCCATGTTaGTTCCAAACAGCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: RSASAMQPGKLRKEDRGSQQYPC*FQTAQL Trigger: TAGTTGCGCTGTTTGGAACAAACATGGATATTGTTG...GCTCCCCCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CAA 90 bp | ACTGAACAGAACAGAGCTGGCATTCATAGCCGAGGCATTCATTTCCTGTTCCGTGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: TEQNRAGIHSRGIHFLFRAALGV*YIKASS Trigger: AGAACTGGCCTTAATGTACAATACACCCAGAGCAGC...ACGGAACAGGAAATGAATGCCTCGGCTATGAATGCCAGCTCTGTTCTGTTCAGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CAA 90 bp | CGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACAGGCAACAATATCCATGTTaGTTCCAAACAGCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: RQRSASAMQPGKLRKEDRQQYPC*FQTAQL Trigger: TAGTTGCGCTGTTTGGAACAAACATGGATATTGTTG...CCTGTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS-3UTR CAA 90 bp | GAACGCCAACGTTCAGCCTCTGCAATGCAACCTGGGAAACTGAGGAAAGAAGACCAACAATATCCATGTTaGTTCCAAACAGCGCAACTA | + |
|
Preference number: 5 (lower is better) Translates to: ERQRSASAMQPGKLRKEDQQYPC*FQTAQL Trigger: TAGTTGCGCTGTTTGGAACAAACATGGATATTGTTG...GTCTTCTTTCCTCAGTTTCCCAGGTTGCATTGCAGAGGCTGAACGTTGGCGTTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
||
| CDS GCA 90 bp | TCTGTTTCTCTGATCATCGGTTTTGGGATGTATTATCCTGGACTCTaGATCGTCTTCCTCTTCATCAGGATTATAAGCTTCTGCACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: SVSLIIGFGMYYPGL*IVFLFIRIISFCTD Trigger: GTCTGTGCAGAAGCTTATAATCCTGATGAAGAGGAAGACGATGCAGAGTCCAGGATAATACATCCCAAAACCGATGATCAGAGAAACAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
||
| CDS CCA 90 bp | CTTGCAATCTGTTTCTCTGATCATCGGTTTTGGGATGTATTATCCTaGACTCTGCATCGTCTTCCTCTTCATCAGGATTATAAGCTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: LAICFSDHRFWDVLS*TLHRLPLHQDYKLL Trigger: CAGAAGCTTATAATCCTGATGAAGAGGAAGACGATGCAGAGTCCAGGATAATACATCCCAAAACCGATGATCAGAGAAACAGATTGCAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS-3UTR CAA 90 bp | TTCTTGTTTTTCTGTTTTGGGAATTGTTCCTCCTTTAACACAGAGCTTCTGAACGCTGCTCTGGGTGTATaGTACATTAAGGCCAGTTCT | + |
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Preference number: 5 (lower is better) Translates to: FLFFCFGNCSSFNTELLNAALGV*YIKASS Trigger: AGAACTGGCCTTAATGTACAATACACCCAGAGCAGC...GTTCAGAAGCTCTGTGTTAAAGGAGGAACAATTCCCAAAACAGAAAAACAAGAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS TCA 72 bp | CGGCGCCCTTGCGCTCGTTCTCCTGCTGCAGCCGCGTaGAGTGCTGCAGCGCGAACTCCAGCAGGTCGGCGG | + |
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Preference number: 6 (lower is better) Translates to: RRPCARSPAAAA*SAAARTPAGRR Trigger: CCGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 72 bp | TGGCCGAAGCGCGCGGCGCCCTTGCGCTCGTTCTCCTaGTGCAGCCGCGTGAAGTGCTGCAGCGCGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: WPKRAAPLRSFS*CSRVKCCSANS Trigger: GGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTTCGGCCA 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CAA 72 bp | CAGGTCCTGCCCTCATGGCCGAAGCGCGCGGCGCCCTaGCGCTCGTTCTCCTGCTGCAGCCGCGTGAAGTGC | + |
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Preference number: 6 (lower is better) Translates to: QVLPSWPKRAAP*RSFSCCSRVKC Trigger: GCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAAGGGCGCCGCGCGCTTCGGCCATGAGGGCAGGACCTG 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS TCA 72 bp | TCTCGGAGTCGGAGCGCATGGGCTCCTCGGCGAAGTTaGCACCCTTACTGGGGATGCCGCCCCCGGCGGCTG | + |
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Preference number: 6 (lower is better) Translates to: SRSRSAWAPRRS*HPYWGCRPRRL Trigger: CAGCCGCCGGGGGCGGCATCCCCAGTAAGGGTGTCAACTTCGCCGAGGAGCCCATGCGCTCCGACTCCGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS GCA 72 bp | TTGCGCTCGTTCTCCTGCTGCAGCCGCGTGAAGTGCTaGAGCGCGAACTCCAGCAGGTCGGCGGGCTGGTGC | + |
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Preference number: 6 (lower is better) Translates to: LRSFSCCSRVKC*SANSSRSAGWC Trigger: GCACCAGCCCGCCGACCTGCTGGAGTTCGCGCTGCAGCACTTCACGCGGCTGCAGCAGGAGAACGAGCGCAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CAA 90 bp | GCACAGACCGAGGCACGCCTTGTGAACCGGTTTATAACTGGAGCGTaGAACGCCCCTGCTTCCGCGGCCTCCTCCTCCTCGCCGTTCTCG | + |
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Preference number: 6 (lower is better) Translates to: AQTEARLVNRFITGA*NAPASAASSSSPFS Trigger: CGAGAACGGCGAGGAGGAGGAGGCCGCGGAAGCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTCACAAGGCGTGCCTCGGTCTGTGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CAA 72 bp | GAGGCACGCCTTGTGAACCGGTTTATAACTGGAGCGTaGAACGCCCCTGCTTCCGCGGCCTCCTCCTCCTCG | + |
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Preference number: 6 (lower is better) Translates to: EARLVNRFITGA*NAPASAASSSS Trigger: CGAGGAGGAGGAGGCCGCGGAAGCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTCACAAGGCGTGCCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CCA 72 bp | ACAGACCGAGGCACGCCTTGTGAACCGGTTTATAACTaGAGCGTTGAACGCCCCTGCTTCCGCGGCCTCCTC | + |
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Preference number: 6 (lower is better) Translates to: TDRGTPCEPVYN*SVERPCFRGLL Trigger: GAGGAGGCCGCGGAAGCAGGGGCGTTCAACGCTCCAGTTATAAACCGGTTCACAAGGCGTGCCTCGGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CAA 72 bp | AGCCTTTCAAATGCTTGCACATCCATGGCTAAGCATTaGACAGTCCCGATGGCGTGTGCAGACGCTGCTCTT | + |
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Preference number: 6 (lower is better) Translates to: SLSNACTSMAKH*TVPMACADAAL Trigger: AAGAGCAGCGTCTGCACACGCCATCGGGACTGTCAAATGCTTAGCCATGGATGTGCAAGCATTTGAAAGGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS CAA 90 bp | GGTCCCAAAAGCCTTTCAAATGCTTGCACATCCATGGCTAAGCATTaGACAGTCCCGATGGCGTGTGCAGACGCTGCTCTTGGTTTGTTA | + |
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Preference number: 6 (lower is better) Translates to: GPKSLSNACTSMAKH*TVPMACADAALGLL Trigger: TAACAAACCAAGAGCAGCGTCTGCACACGCCATCGGGACTGTCAAATGCTTAGCCATGGATGTGCAAGCATTTGAAAGGCTTTTGGGACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS GCA 72 bp | ATTTCCATGCAAGGTCCCAAAAGCCTTTCAAATGCTTaGACATCCATGGCTAAGCATTTGACAGTCCCGATG | + |
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Preference number: 6 (lower is better) Translates to: ISMQGPKSLSNA*TSMAKHLTVPM Trigger: CATCGGGACTGTCAAATGCTTAGCCATGGATGTGCAAGCATTTGAAAGGCTTTTGGGACCTTGCATGGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 ENSMUST00000146865.2 |
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| CDS GCA 72 bp | CTGATCATCGGTTTTGGGATGTATTATCCTGGACTCTaGATCGTCTTCCTCTTCATCAGGATTATAAGCTTC | + |
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Preference number: 6 (lower is better) Translates to: LIIGFGMYYPGL*IVFLFIRIISF Trigger: GAAGCTTATAATCCTGATGAAGAGGAAGACGATGCAGAGTCCAGGATAATACATCCCAAAACCGATGATCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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| CDS CCA 72 bp | TGTTTCTCTGATCATCGGTTTTGGGATGTATTATCCTaGACTCTGCATCGTCTTCCTCTTCATCAGGATTAT | + |
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Preference number: 6 (lower is better) Translates to: CFSDHRFWDVLS*TLHRLPLHQDY Trigger: ATAATCCTGATGAAGAGGAAGACGATGCAGAGTCCAGGATAATACATCCCAAAACCGATGATCAGAGAAACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000003079.12 ENSMUST00000036497.16 |
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