Pregenerated sensors for PRKAR1B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025855Ensembl transcript IDs: ENSMUST00000026973.14, ENSMUST00000110889.8, ENSMUST00000110890.8, ENSMUST00000129851.8, ENSMUST00000134762.2, ENSMUST00000147505.8, ENSMUST00000148002.8, ENSMUST00000155833.8
Found 195 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCACCAGCCGCACTCAGCTACTAACCAGCAGCTCCCAGGCCTCTaGCATAGGAAATGGGTCACAGGGCCACATGGGGAGGCCCCCAGG | + |
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Preference number: 1 (lower is better) Translates to: GHQPHSATNQQLPGL*HRKWVTGPHGEAPR Trigger: CCTGGGGGCCTCCCCATGTGGCCCTGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTGCTGGTTAGTAGCTGAGTGCGGCTGGTGCCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTaGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGT | + |
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Preference number: 1 (lower is better) Translates to: SWSPGDGDSAQTHHV*KAPPSATLPAQSGR Trigger: ACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | GCTTGCTGTTCCTTGGGGTCTCCAATAGGCAGGTTGACAGAGTCATaGCTCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCA | + |
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Preference number: 1 (lower is better) Translates to: ACCSLGSPIGRLTES*LLVSRRWGLSPDSP Trigger: TGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGAGCCATGACTCTGTCAACCTGCCTATTGGAGACCCCAAGGAACAGCAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | CCCAAGATAAGGCTGCAGGGGGAGCCAGCTGTCACTGCCCTGGTCTaGGGACTCAGTTGCCTCTTGCCCTTTGTTTTTGAAGAAGCACAA | + |
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Preference number: 1 (lower is better) Translates to: PKIRLQGEPAVTALV*GLSCLLPFVFEEAQ Trigger: TTGTGCTTCTTCAAAAACAAAGGGCAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGACAGCTGGCTCCCCCTGCAGCCTTATCTTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR TCA 90 bp | TTGGGCCTAGACCAGAGAATCTTACAAGAACCAGGGACAGTGTTCTaGTTAACTCCCAGCTCTGGGGGAAAGCTACAAGGGTGGCCACAG | + |
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Preference number: 1 (lower is better) Translates to: LGLDQRILQEPGTVF*LTPSSGGKLQGWPQ Trigger: CTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTTAATCAGAACACTGTCCCTGGTTCTTGTAAGATTCTCTGGTCTAGGCCCAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | TCTGGCTGGCTCATATCACACTCCACGGTGGATGGTTTAGGGATGTaGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTAAGGGA | + |
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Preference number: 1 (lower is better) Translates to: SGWLISHSTVDGLGM*GQAWFQYIIPSCKG Trigger: TCCCTTACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAGCCAGCCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | ATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTaGTTTCAGTACATTATCCCCTCTTGTAAGGGAACAGAGAGACTC | + |
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Preference number: 1 (lower is better) Translates to: ISHSTVDGLGMWGQA*FQYIIPSCKGTERL Trigger: GAGTCTCTCTGTTCCCTTACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CCA 90 bp | GCACATTTAATAGTTCATGCAGCGCTTGGTGACATAAATAGGGGATaGAGAAGCAGGGCCACAGAATCCACAGATAGTCCACAGTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: AHLIVHAALGDINRG*RSRATESTDSPQCR Trigger: CCTGCACTGTGGACTATCTGTGGATTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAACTATTAAATGTGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCGGTCACAGGGCCACATaGGGAGGCCCCCAGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: SWSPGDGDSAQTHHVWKAGHRAT*GGPQGC Trigger: GCACCCCTGGGGGCCTCCCCATGTGGCCCTGTGACC...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CAA 90 bp | CTCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTaGGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: LLVSRRWGLSPDSPR*ESPAVSHTSCPIWA Trigger: CGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCCTTCAGGGGTCCTTCTaGGAGTTGGGGACAGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: GDGDSAQTHHVWKAPPSALQGSF*ELGTVR Trigger: GCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAG...GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | GGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCCCAACTGTCCTGACATaGGGTCAGGGTGCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: GDGDSAQTHHVWKAPPSAPTVLT*GQGAWP Trigger: AGGCCAGGCACCCTGACCTCATGTCAGGACAGTTGG...GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | GGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGTCCAGCCAGTATCAGCCACCACCTCCTaGCTTTCTGGGGCCATAGCT | + |
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Preference number: 2 (lower is better) Translates to: GKPRRQPHFLPNLGVQPVSATTS*LSGAIA Trigger: AGCTATGGCCCCAGAAAGTCAGGAGGTGGTGGCTGA...TACTGGCTGGACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | GGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCGACATGAGGTCAGGGTaGCTGGCCTACCCGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: GDGDSAQTHHVWKAPPSADMRSG*LAYPEM Trigger: CATTTCCGGGTAGGCCAGGCACCCTGACCTCATGTC...GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGCCACAGCCCCACTCTTaGGACCTGGCAGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: HSCGPWVWLAHITLHGGWPQPHS*DLAGHR Trigger: CCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGG...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTGGTCACAGGGCCACATaGGGAGGCCCCCAGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: RLITLSHDMPVTQGTLSSGHRAT*GGPQGC Trigger: GCACCCCTGGGGGCCTCCCCATGTGGCCCTGTGACC...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGTCCAGCCAGTACAGCTCCCAGGCCTCTaGCATAGGAAATGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: GKPRRQPHFLPNLGVQPVQLPGL*HRKWVT Trigger: TGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTG...TACTGGCTGGACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCTTCAGGGGTCCTTCTaGGAGTTGGGGACAGTGCGC | + |
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Preference number: 2 (lower is better) Translates to: SWSPGDGDSAQTHHVWKALQGSF*ELGTVR Trigger: GCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAG...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTGGTCACAGGGCCACATaGGGAGGCCCCCAGGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: LISHSTVDGLGMWGQAWFGHRAT*GGPQGC Trigger: GCACCCCTGGGGGCCTCCCCATGTGGCCCTGTGACC...AAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGGGAGAGGGGATAAGGTaGCCCCAAGATAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPGEGIR*PQDKAA Trigger: TGCAGCCTTATCTTGGGGCCACCTTATCCCCTCTCC...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGGACATGAGGTCAGGGTaGCTGGCCTACCCGGAAATG | + |
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Preference number: 2 (lower is better) Translates to: HSCGPWVWLAHITLHGGWDMRSG*LAYPEM Trigger: CATTTCCGGGTAGGCCAGGCACCCTGACCTCATGTC...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | CCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTCTGGCATAGGAAATaGGTCACAGGGCCACATGGG | + |
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Preference number: 2 (lower is better) Translates to: PRLTTFGKPRRQPHFLPNLWHRK*VTGPHG Trigger: CCCATGTGGCCCTGTGACCCATTTCCTATGCCAGAG...ATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTGTCACTGCCCTGGTCTaGGGACTCAGTTGCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPVTALV*GLSCLL Trigger: CAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGAC...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCGTCACTGCCCTGGTCTaGGGACTCAGTTGCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: SWSPGDGDSAQTHHVWKAVTALV*GLSCLL Trigger: CAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGAC...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | GGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGTCCAGCCAGTACACCTCCTGACTTTCTaGGGCCATAGCTTAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: GKPRRQPHFLPNLGVQPVHLLTF*GHSLVS Trigger: AGAGACTAAGCTATGGCCCCAGAAAGTCAGGAGGTG...TACTGGCTGGACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGCAGACTCACCACGTTTaGAAAGCCCCGCCGTCAGCC | + |
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Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQQTHHV*KAPPSA Trigger: GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTG...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTCCACAGCCCCACTCTTaGGACCTGGCAGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: RLITLSHDMPVTQGTLSSPQPHS*DLAGHR Trigger: CCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGG...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGGTCACTGCCCTGGTCTaGGGACTCAGTTGCCTCTTG | + |
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Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQVTALV*GLSCLL Trigger: CAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGAC...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTGGAGAGGGGATAAGGTaGCCCCAAGATAAGGCTGCA | + |
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Preference number: 2 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPGEGIR*PQDKAA Trigger: TGCAGCCTTATCTTGGGGCCACCTTATCCCCTCTCC...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAGGAGCCAGCTGTCACTaGCCTGGTCTGGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATEGASCH*PGLGTQ Trigger: CTGAGTCCCCAGACCAGGGCAGTGACAGCTGGCTCC...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCCAGCTCCCAGGCCTCTaGCATAGGAAATGGGTCACA | + |
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Preference number: 2 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGQLPGL*HRKWVT Trigger: TGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTG...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR CAA 90 bp | CAAGTTGGAGTTGCTTGCTGTTCCTTGGGGTCTCCAATAGGCAGGTaGACAGAGTCATGGCTCCTGGTCTCCAGGAGATGGGGACTCAGC | + |
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Preference number: 2 (lower is better) Translates to: QVGVACCSLGSPIGR*TESWLLVSRRWGLS Trigger: GCTGAGTCCCCATCTCCTGGAGACCAGGAGCCATGACTCTGTCAACCTGCCTATTGGAGACCCCAAGGAACAGCAAGCAACTCCAACTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTGAGAGTTGGGGACAGTaGGCAGGGACCAAGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: RLITLSHDMPVTQGTLSSESWGQ*AGTKNA Trigger: GGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTC...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGCAAGTTGGAGTTGCTTaGTGTTCCTTGGGGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HSCGPWVWLAHITLHGGWQVGVA*CSLGSP Trigger: TGGAGACCCCAAGGAACAGCAAGCAACTCCAACTTG...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTGGAGCCAGCTGTCACTaGCCTGGTCTGGGGACTCAG | + |
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Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCGASCH*PGLGTQ Trigger: CTGAGTCCCCAGACCAGGGCAGTGACAGCTGGCTCC...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCCAAGTTGGAGTTGCTTaGTGTTCCTTGGGGTCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGQVGVA*CSLGSP Trigger: TGGAGACCCCAAGGAACAGCAAGCAACTCCAACTTG...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGCACCTCCTGACTTTCTaGGGCCATAGCTTAGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQHLLTF*GHSLVS Trigger: AGAGACTAAGCTATGGCCCCAGAAAGTCAGGAGGTG...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAATTGTGGACACTCATGTaGCCCTTGGGTCTGGCTGGC | + |
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Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATELWTLM*PLGLAG Trigger: GCCAGCCAGACCCAAGGGCCACATGAGTGTCCACAA...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | TTTACACTTGGGCCTAGACCAGAGAATCTTACAAGAACCAGGGACAGTGTTCTGCCACAGCCCCACTCTTaGGACCTGGCAGGACACAGG | + |
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Preference number: 2 (lower is better) Translates to: FTLGPRPENLTRTRDSVLPQPHS*DLAGHR Trigger: CCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGG...CAGAACACTGTCCCTGGTTCTTGTAAGATTCTCTGGTCTAGGCCCAAGTGTAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTCCAACTGTCCTGACATaGGGTCAGGGTGCCTGGCCT | + |
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Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCPTVLT*GQGAWP Trigger: AGGCCAGGCACCCTGACCTCATGTCAGGACAGTTGG...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR TCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGGGGGCAAGAAAAGGTTaGTCACACTGTCTCATGACA | + |
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Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQGARKG*SHCLMT Trigger: TGTCATGAGACAGTGTGATCAACCTTTTCTTGCCCC...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| 3UTR-3UTR GCA 90 bp | GGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTGGCAGGACACAGGACTCAGTTGCCTCTTaGCCTTTGTTTTTGAAGAAG | + |
|
Preference number: 2 (lower is better) Translates to: GKATRVATAPLLRPGRTQDSVAS*PLFLKK Trigger: CTTCTTCAAAAACAAAGGGCAAGAGGCAACTGAGTC...CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR GCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGCGCAGGGACCAAGAATaGCTTTCAACCTCTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQRRDQE*LSTSVS Trigger: AGAAACAGAGGTTGAAAGGCATTCTTGGTCCCTGCG...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGCTCCCAGGCCTCTaGCATAGGAAATGGGTCACA | + |
|
Preference number: 2 (lower is better) Translates to: LISHSTVDGLGMWGQAWFQLPGL*HRKWVT Trigger: TGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTG...AAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTCAGACTCACCACGTTTaGAAAGCCCCGCCGTCAGCC | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCQTHHV*KAPPSA Trigger: GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTG...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GACAGGGATTCGGGCTTTACAGAGAGAGTCTGGGAAGGCTCAAAACTACAACTTTCAGCCACCACCTCCTaGCTTTCTGGGGCCATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DRDSGFTERVWEGSKLQLSATTS*LSGAIA Trigger: AGCTATGGCCCCAGAAAGTCAGGAGGTGGTGGCTGA...AAGTTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAAGCCCGAATCCCTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTTCAGCCACCACCTCCTaGCTTTCTGGGGCCATAGCT | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCSATTS*LSGAIA Trigger: AGCTATGGCCCCAGAAAGTCAGGAGGTGGTGGCTGA...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTAGGTTGACAGAGTCATaGCTCCTGGTCTCCAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: LISHSTVDGLGMWGQAWFRLTES*LLVSRR Trigger: TCTCCTGGAGACCAGGAGCCATGACTCTGTCAACCT...AAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAAGGTTGACAGAGTCATaGCTCCTGGTCTCCAGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATERLTES*LLVSRR Trigger: TCTCCTGGAGACCAGGAGCCATGACTCTGTCAACCT...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGTATTTATTCCAAAAGTaGGTCCAGAGAAAGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: HSCGPWVWLAHITLHGGWYLFQK*VQRKGR Trigger: CCTACCCTTTCTCTGGACTCACTTTTGGAATAAATA...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCTTGCCCTTTGTTTTTaGAGAAGCACAAGATGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: SWSPGDGDSAQTHHVWKALALCF*RSTRWL Trigger: TAACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAG...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | AACTCCCAGCTCTGGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACTTGCCCTTTGTTTTTaGAGAAGCACAAGATGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: NSQLWGKATRVATAPLLRLALCF*RSTRWL Trigger: TAACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAG...TCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAACAGAGAGACTCGGGTaGGAGGTGTTTGGAAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATETERLG*EVFGSQ Trigger: TTGACTTCCAAACACCTCTCACCCGAGTCTCTCTGT...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTCTCTGGCATAGGAAATaGGTCACAGGGCCACATGGG | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCLWHRK*VTGPHG Trigger: CCCATGTGGCCCTGTGACCCATTTCCTATGCCAGAG...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGTATTTATTCCAAAAGTaGGTCCAGAGAAAGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: NPQIVHSAGTTHMARATQYLFQK*VQRKGR Trigger: CCTACCCTTTCTCTGGACTCACTTTTGGAATAAATA...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAGGGGCAAGAAAAGGTTaGTCACACTGTCTCATGACA | + |
|
Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATEGARKG*SHCLMT Trigger: TGTCATGAGACAGTGTGATCAACCTTTTCTTGCCCC...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCTTTACAGAGAGAGTCTaGGAAGGCTCAAAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGFTERV*EGSKLQ Trigger: TTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAA...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTACAGAGAGACTCGGGTaGGAGGTGTTTGGAAGTCAA | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCTERLG*EVFGSQ Trigger: TTGACTTCCAAACACCTCTCACCCGAGTCTCTCTGT...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTCTAGCAAGTTGGAGTTaGTTGCTGTTCCTTGGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCLASWS*LLFLGV Trigger: GACCCCAAGGAACAGCAAGCAACTCCAACTTGCTAG...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCTTTCAACCTCTGTTTCTTCTCTCAGCTTGAGTGCTCATTTGAGGACATCTGGAGAGGGGATAAGGTaGCCCCAAGATAAGGCTGCA | + |
|
Preference number: 2 (lower is better) Translates to: CLSTSVSSLSLSAHLRTSGEGIR*PQDKAA Trigger: TGCAGCCTTATCTTGGGGCCACCTTATCCCCTCTCC...AGATGTCCTCAAATGAGCACTCAAGCTGAGAGAAGAAACAGAGGTTGAAAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR GCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTCGCAGGGACCAAGAATaGCTTTCAACCTCTGTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCRRDQE*LSTSVS Trigger: AGAAACAGAGGTTGAAAGGCATTCTTGGTCCCTGCG...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR TCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAACTTGCCCTTTGTTTTTaGAGAAGCACAAGATGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATELALCF*RSTRWL Trigger: TAACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAG...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAATTTACAGAGAGAGTCTaGGAAGGCTCAAAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: VHAALGDINRGWRSRATEFTERV*EGSKLQ Trigger: TTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAA...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTTTTACAGAGAGAGTCTaGGAAGGCTCAAAACTACAA | + |
|
Preference number: 2 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCFTERV*EGSKLQ Trigger: TTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAA...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CAA 90 bp | GAATGCCTTTCAACCTCTGTTTCTTCTCTCAGCTTGAGTGCTCATTaGAGGACATCTCCATTTGTCACAATCTGTTTTACACTTGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: ECLSTSVSSLSLSAH*RTSPFVTICFTLGP Trigger: AGGCCCAAGTGTAAAACAGATTGTGACAAATGGAGATGTCCTCAAATGAGCACTCAAGCTGAGAGAAGAAACAGAGGTTGAAAGGCATTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | CCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTaGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: PGDGDSAQTHHV*KAPPSATLPAQ Trigger: TTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | CCGCACTCAGCTACTAACCAGCAGCTCCCAGGCCTCTaGCATAGGAAATGGGTCACAGGGCCACATGGGGAG | + |
|
Preference number: 3 (lower is better) Translates to: PHSATNQQLPGL*HRKWVTGPHGE Trigger: CTCCCCATGTGGCCCTGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTGCTGGTTAGTAGCTGAGTGCGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR TCA 72 bp | GGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTaGGACCTGGCAGGACACAGGGCCAGTTCAAGTATG | + |
|
Preference number: 3 (lower is better) Translates to: GGKLQGWPQPHS*DLAGHRASSSM Trigger: CATACTTGAACTGGCCCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR GCA 72 bp | AGAAGCAGGGCCACAGAATCCACAGATAGTCCACAGTaGAGGCACGACACACATGGCCAGGGCCACACAGCG | + |
|
Preference number: 3 (lower is better) Translates to: RSRATESTDSPQ*RHDTHGQGHTA Trigger: CGCTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATTCTGTGGCCCTGCTTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTGCCACAGCCCCACTCTaGAGACCTGGCAGGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: RLITLSHDMPVTQGTLSSATAPL*RPGRTQ Trigger: CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGC...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGTCGGGTGAGAGGTGTTaGGAAGTCAAGGGACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: HSCGPWVWLAHITLHGGWSGERC*EVKGQG Trigger: TCCCTGTCCCTTGACTTCCAAACACCTCTCACCCGA...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | AGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTaGCAGGACACAGGGCCAGTTCAAGTATGGGGATCA | + |
|
Preference number: 3 (lower is better) Translates to: SYKGGHSPTLET*QDTGPVQVWGS Trigger: TGATCCCCATACTTGAACTGGCCCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGACACTCATGTGGCCCTaGGGTCTGGCTGGCTCATAT | + |
|
Preference number: 3 (lower is better) Translates to: NPQIVHSAGTTHMARATQTLMWP*GLAGSY Trigger: ATATGAGCCAGCCAGACCCAAGGGCCACATGAGTGT...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR TCA 72 bp | GGTCACCTAGACGTGCACAGCGGGGCAAGAAAAGGTTaGTCACACTGTCTCATGACATGCCGGTCACCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: GHLDVHSGARKG*SHCLMTCRSPR Trigger: CCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCTTTTCTTGCCCCGCTGTGCACGTCTAGGTGACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | AGAACCAGGGACAGTGTTCTGATTAACTCCCAGCTCTaGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: RTRDSVLINSQL*GKATRVATAPL Trigger: GAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTTAATCAGAACACTGTCCCTGGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | GCAGTTGTGGACACTCATGTGGCCCTTGGGTCTGGCTaGCTCATATCACACTCCACGGTGGATGGTTTAGGG | + |
|
Preference number: 3 (lower is better) Translates to: AVVDTHVALGSG*LISHSTVDGLG Trigger: CCCTAAACCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTGTCCACAACTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | GGGACACTAAGCAGTTGTGGACACTCATGTGGCCCTTaGGTCTGGCTGGCTCATATCACACTCCACGGTGGA | + |
|
Preference number: 3 (lower is better) Translates to: GTLSSCGHSCGP*VWLAHITLHGG Trigger: TCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTGTCCACAACTGCTTAGTGTCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGTCTCCAATAGGCAGGTaGACAGAGTCATGGCTCCTG | + |
|
Preference number: 3 (lower is better) Translates to: NPQIVHSAGTTHMARATQSPIGR*TESWLL Trigger: CAGGAGCCATGACTCTGTCAACCTGCCTATTGGAGA...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTGCCACAGCCCCACTCTaGAGACCTGGCAGGACACAG | + |
|
Preference number: 3 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCATAPL*RPGRTQ Trigger: CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGC...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | CCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATAGCTTGAGTGCTCATTaGAGGACATCTCCATTTGTC | + |
|
Preference number: 3 (lower is better) Translates to: PRLTTFGKPRRQPHFLPNSLSAH*RTSPFV Trigger: GACAAATGGAGATGTCCTCAAATGAGCACTCAAGCT...ATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | TGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATaGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: WVWLAHITLHGG*FRDVGSSLVSV Trigger: TACTGAAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | CTAAGCAGTTGTGGACACTCATGTGGCCCTTGGGTCTaGCTGGCTCATATCACACTCCACGGTGGATGGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LSSCGHSCGPWV*LAHITLHGGWF Trigger: AAACCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTGTCCACAACTGCTTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCTTGCCCTTTGTTTTaGAAGAAGCACAAGATGGTT | + |
|
Preference number: 3 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPSCPLF*KKHKMV Trigger: AACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAGA...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAGCAAGTTGGAGTTGCTaGCTGTTCCTTGGGGTCTCC | + |
|
Preference number: 3 (lower is better) Translates to: VHAALGDINRGWRSRATEASWSC*LFLGVS Trigger: GGAGACCCCAAGGAACAGCAAGCAACTCCAACTTGC...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAATCGGGTGAGAGGTGTTaGGAAGTCAAGGGACAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: VHAALGDINRGWRSRATESGERC*EVKGQG Trigger: TCCCTGTCCCTTGACTTCCAAACACCTCTCACCCGA...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR GCA 72 bp | GAGCCAGCTGTCACTGCCCTGGTCTGGGGACTCAGTTaGCTCTTGCCCTTTGTTTTTGAAGAAGCACAAGAT | + |
|
Preference number: 3 (lower is better) Translates to: EPAVTALVWGLS*LLPFVFEEAQD Trigger: ATCTTGTGCTTCTTCAAAAACAAAGGGCAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGACAGCTGGCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTACTAGCAAGTTGGAGTaGCTTGCTGTTCCTTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: RLITLSHDMPVTQGTLSSTSKLE*LAVPWG Trigger: ACCCCAAGGAACAGCAAGCAACTCCAACTTGCTAGT...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGACTTTAACTAGCAAGTaGGAGTTGCTTGCTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HSCGPWVWLAHITLHGGWTLTSK*ELLAVP Trigger: AGGAACAGCAAGCAACTCCAACTTGCTAGTTAAAGT...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTGTTGCTTGCTGTTCCTaGGGGTCTCCAATAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCVACCS*GSPIGR Trigger: CCTGCCTATTGGAGACCCCAAGGAACAGCAAGCAAC...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | GACAGGGATTCGGGCTTTACAGAGAGAGTCTGGGAAGGCTCAAAACTACAACTTGTTGCTTGCTGTTCCTaGGGGTCTCCAATAGGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: DRDSGFTERVWEGSKLQLVACCS*GSPIGR Trigger: CCTGCCTATTGGAGACCCCAAGGAACAGCAAGCAAC...AAGTTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAAGCCCGAATCCCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | CTTGAGACCTGGCAGGACACAGGGCCAGTTCAAGTATaGGGATCAGACAAGAATTCCCAGAAGACTTGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: LETWQDTGPVQV*GSDKNSQKTWR Trigger: TCTCCAAGTCTTCTGGGAATTCTTGTCTGATCCCCATACTTGAACTGGCCCTGTGTCCTGCCAGGTCTCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR TCA 72 bp | GACCAGAGAATCTTACAAGAACCAGGGACAGTGTTCTaGTTAACTCCCAGCTCTGGGGGAAAGCTACAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DQRILQEPGTVF*LTPSSGGKLQG Trigger: CCCTTGTAGCTTTCCCCCAGAGCTGGGAGTTAATCAGAACACTGTCCCTGGTTCTTGTAAGATTCTCTGGTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | TCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTaGTTTCAGTACATTATCCCCTCTTGTAAGGGAACA | + |
|
Preference number: 3 (lower is better) Translates to: STVDGLGMWGQA*FQYIIPSCKGT Trigger: TGTTCCCTTACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTaGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: LISHSTVDGLGM*GQAWFQYIIPS Trigger: AGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTACTTTAACTAGCAAGTaGGAGTTGCTTGCTGTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: RLITLSHDMPVTQGTLSSTLTSK*ELLAVP Trigger: AGGAACAGCAAGCAACTCCAACTTGCTAGTTAAAGT...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR GCA 72 bp | CTGTCACTGCCCTGGTCTGGGGACTCAGTTGCCTCTTaGCCTTTGTTTTTGAAGAAGCACAAGATGGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: LSLPWSGDSVAS*PLFLKKHKMVI Trigger: AATAACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGACAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CCA 72 bp | ATAGTTCATGCAGCGCTTGGTGACATAAATAGGGGATaGAGAAGCAGGGCCACAGAATCCACAGATAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: IVHAALGDINRG*RSRATESTDSP Trigger: TGGACTATCTGTGGATTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTGGGGGTGCCGTAGATaGGAGCCAGCTCCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPWGCRR*EPAPRS Trigger: GCTTCGGGGAGCTGGCTCTCATCTACGGCACCCCCA...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | GGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGTCCAGCCAGTACTAACTTCACACACTTaGGGGGACCCCGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: GKPRRQPHFLPNLGVQPVLTSHT*GDPGPP Trigger: TGGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAG...TACTGGCTGGACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGCCTCTGGCATAGGAAATGGGTCACAGGGCCACATGGGGAGGCCCCCAGGTGCCGAGCCAGGATCTaGCTGTTTTCCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PGLWHRKWVTGPHGEAPRCRARI*LFSSFS Trigger: GGAGAAGGAGGAAAACAGGCAGATCCTGGCTCGGCA...CCTGGGGGCCTCCCCATGTGGCCCTGTGACCCATTTCCTATGCCAGAGGCCTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | TCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTaGGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: SRRWGLSPDSPR*ESPAVSHTSCP Trigger: TGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGCGATACCCCAGAGCTTaGGGTCCGTCTTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPRYPRA*GPSWPS Trigger: TGAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCG...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGATGGGGGTGCCGTAGATaGGAGCCAGCTCCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: INLGPSGVLLRVGDSAQGWGCRR*EPAPRS Trigger: GCTTCGGGGAGCTGGCTCTCATCTACGGCACCCCCA...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGCTAACTTCACACACTTaGGGGGACCCCGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: HSCGPWVWLAHITLHGGWLTSHT*GDPGPP Trigger: TGGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAG...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | GGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCAGCCTGGCCAGCGCGGTCATaGTCTTATAGTCCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDGDSAQTHHVWKAPPSAWPARS*SYSPWE Trigger: TTCCCAAGGACTATAAGACCATGACCGCGCTGGCCA...GGCTGACGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGATCACACTGGGAGTTTaGCTTCTGCCGAGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPITLGV*LLPSQD Trigger: ATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGAT...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | GGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTGGCAGGACACAGGTTTCCCCACCGATGTaGGTGACAGGAAACATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GKATRVATAPLLRPGRTQVSPPM*VTGNMA Trigger: CGCCATGTTTCCTGTCACTCACATCGGTGGGGAAAC...CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTCGATACCCCAGAGCTTaGGGTCCGTCTTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPRYPRA*GPSWPS Trigger: TGAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCG...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGTCGTCGCTGGAGGACTaGAGCAGTGCCCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HSCGPWVWLAHITLHGGWSSLED*SSALCD Trigger: ATCACAGAGGGCACTGCTTCAGTCCTCCAGCGACGA...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTGGGGTTTGGAGGTGTTaGGGAGATCTCCTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPGVWRC*GDLLIV Trigger: CACGATGAGGAGATCTCCCCAACACCTCCAAACCCC...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCGGGGTTTGGAGGTGTTaGGGAGATCTCCTCATCGTG | + |
|
Preference number: 4 (lower is better) Translates to: SWSPGDGDSAQTHHVWKAGVWRC*GDLLIV Trigger: CACGATGAGGAGATCTCCCCAACACCTCCAAACCCC...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | TGGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTaGAGACCTGGCAGGACACAGGGCCAGTTCAAGTAT | + |
|
Preference number: 4 (lower is better) Translates to: WGKATRVATAPL*RPGRTQGQFKY Trigger: ATACTTGAACTGGCCCTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | GGGGACACTAAGCAGTTGTGGACACTCATGTGGCCCTaGGGTCTGGCTGGCTCATATCACACTCCACGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDTKQLWTLMWP*GLAGSYHTPRW Trigger: CCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTGTCCACAACTGCTTAGTGTCCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCGTTTCCCCACCGATGTaGGTGACAGGAAACATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGVSPPM*VTGNMA Trigger: CGCCATGTTTCCTGTCACTCACATCGGTGGGGAAAC...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACGATACCCCAGAGCTTaGGGTCCGTCTTGGCCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: INLGPSGVLLRVGDSAQGRYPRA*GPSWPS Trigger: TGAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCG...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTCTAACTTCACACACTTaGGGGGACCCCGGGCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSLTSHT*GDPGPP Trigger: TGGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAG...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGCATTCTTTGAGCACCTaGTGGATGCCATGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPHSLST*WMPCFC Trigger: GCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATG...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | GGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTGGCAGGACACAGTCTCCATCTTCAAACTaGACAGGCTCCAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GKATRVATAPLLRPGRTQSPSSN*TGSRAS Trigger: TGATGCCCTGGAGCCTGTGCAGTTTGAAGATGGAGA...CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGATCCTCATCCTCCGAGTaGAAGCATGATGGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: INLGPSGVLLRVGDSAQGSSSSE*KHDGEA Trigger: GGCCTCCCCATCATGCTTCCACTCGGAGGATGAGGA...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGTGAGTCCAGAGAAAGGGTAGGCTCCGGGCCGGGCACCAGCCGCACTCAGGAGATCTCCTCATCGTaGGAATCACACTGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: KSESRERVGSGPGTSRTQEISSS*ESHWEF Trigger: AAACTCCCAGTGTGATTCCCACGATGAGGAGATCTC...CTGAGTGCGGCTGGTGCCCGGCCCGGAGCCTACCCTTTCTCTGGACTCACTTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGATCACACTGGGAGTTTaGCTTCTGCCGAGCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: NPQIVHSAGTTHMARATQITLGV*LLPSQD Trigger: ATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGAT...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTCGTCGCTGGAGGACTaGAGCAGTGCCCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSSSLED*SSALCD Trigger: ATCACAGAGGGCACTGCTTCAGTCCTCCAGCGACGA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTTCCAACTTCTCAAAGTaGTCCCGGAGGAATCGCAGT | + |
|
Preference number: 4 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPSNFSK*SRRNRS Trigger: ACTGCGATTCCTCCGGGAGCACTTTGAGAAGTTGGA...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | CTAACCAGCAGCTCCCAGGCCTCTGGCATAGGAAATGGGTCACAGGGCCACATGTCTCCATCTTCAAACTaGACAGGCTCCAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: LTSSSQASGIGNGSQGHMSPSSN*TGSRAS Trigger: TGATGCCCTGGAGCCTGTGCAGTTTGAAGATGGAGA...CATGTGGCCCTGTGACCCATTTCCTATGCCAGAGGCCTGGGAGCTGCTGGTTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTCCTCATCCTCCGAGTaGAAGCATGATGGGGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSSSSSE*KHDGEA Trigger: GGCCTCCCCATCATGCTTCCACTCGGAGGATGAGGA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGTCGTGGGAATCACACTaGGAGTTTGACTTCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: HSCGPWVWLAHITLHGGWSWESH*EFDFCR Trigger: TCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGA...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | AACTCCCAGCTCTGGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGATCGTGGGAATCACACTaGGAGTTTGACTTCTGCCGA | + |
|
Preference number: 4 (lower is better) Translates to: NSQLWGKATRVATAPLLRSWESH*EFDFCR Trigger: TCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGA...TCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTCCACGTACTCCTCATTaGGGGATCGTCGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSPRTPH*GIVAGG Trigger: TCCTCCAGCGACGATCCCCCAATGAGGAGTACGTGG...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | GTTGCTTGCTGTTCCTTGGGGTCTCCAATAGGCAGGTaGACAGAGTCATGGCTCCTGGTCTCCAGGAGATGG | + |
|
Preference number: 4 (lower is better) Translates to: VACCSLGSPIGR*TESWLLVSRRW Trigger: CCATCTCCTGGAGACCAGGAGCCATGACTCTGTCAACCTGCCTATTGGAGACCCCAAGGAACAGCAAGCAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGCATTCCCTTGCTGTATaGCTGTTTCCCCACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: NPQIVHSAGTTHMARATQHSLAV*LFPHRC Trigger: ACATCGGTGGGGAAACAGTCATACAGCAAGGGAATG...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTTGGGCCTAGACCAGAGAATCTTACAAGAACCAGGGACAGTGTTCTGTGGGGGTGCCGTAGATaGGAGCCAGCTCCCCGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: FTLGPRPENLTRTRDSVLWGCRR*EPAPRS Trigger: GCTTCGGGGAGCTGGCTCTCATCTACGGCACCCCCA...CAGAACACTGTCCCTGGTTCTTGTAAGATTCTCTGGTCTAGGCCCAAGTGTAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | CCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGACCAAGAATGCCTTTGGCGACACAGAGGTaGACAATGCATTCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSGVLLRVGDSAQGPRMPLATQR*TMHSLS Trigger: GCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAA...AGGCATTCTTGGTCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGCCGAGCCAGGATCTaGCTGTTTTCCTCCTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSCRARI*LFSSFS Trigger: GGAGAAGGAGGAAAACAGGCAGATCCTGGCTCGGCA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAACCACGTACTCCTCATTaGGGGATCGTCGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VHAALGDINRGWRSRATEPRTPH*GIVAGG Trigger: TCCTCCAGCGACGATCCCCCAATGAGGAGTACGTGG...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAGTTTCCCCACCGATGTaGGTGACAGGAAACATGGCG | + |
|
Preference number: 4 (lower is better) Translates to: VHAALGDINRGWRSRATEVSPPM*VTGNMA Trigger: CGCCATGTTTCCTGTCACTCACATCGGTGGGGAAAC...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGAGACAGTTAGGGAGATaGAGCTGTTGTAACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NPQIVHSAGTTHMARATQRQLGR*SCCNAG Trigger: TCCAGCGTTACAACAGCTTCATCTCCCTAACTGTCT...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCCATTCTTTGAGCACCTaGTGGATGCCATGTTTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGHSLST*WMPCFC Trigger: GCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATG...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGATCGTTGTCGTCCAGGTaGGAAAAGAGCACGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: INLGPSGVLLRVGDSAQGSLSSR*EKSTFL Trigger: TAAGAACGTGCTCTTTTCTCACCTGGACGACAACGA...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGAAGACAGTTAGGGAGATaGAGCTGTTGTAACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: INLGPSGVLLRVGDSAQGRQLGR*SCCNAG Trigger: TCCAGCGTTACAACAGCTTCATCTCCCTAACTGTCT...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTCTCCATCTTCAAACTaGACAGGCTCCAGGGCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSSPSSN*TGSRAS Trigger: TGATGCCCTGGAGCCTGTGCAGTTTGAAGATGGAGA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAATGGCCAGCGCGGTCATaGTCTTATAGTCCTTGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: VHAALGDINRGWRSRATEWPARS*SYSPWE Trigger: TTCCCAAGGACTATAAGACCATGACCGCGCTGGCCA...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTCGTTGTCGTCCAGGTaGGAAAAGAGCACGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSSLSSR*EKSTFL Trigger: TAAGAACGTGCTCTTTTCTCACCTGGACGACAACGA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAACATTCCCTTGCTGTATaGCTGTTTCCCCACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: VHAALGDINRGWRSRATEHSLAV*LFPHRC Trigger: ACATCGGTGGGGAAACAGTCATACAGCAAGGGAATG...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TTTACACTTGGGCCTAGACCAGAGAATCTTACAAGAACCAGGGACAGTGTTCTGTCGTCGCTGGAGGACTaGAGCAGTGCCCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: FTLGPRPENLTRTRDSVLSSLED*SSALCD Trigger: ATCACAGAGGGCACTGCTTCAGTCCTCCAGCGACGA...CAGAACACTGTCCCTGGTTCTTGTAAGATTCTCTGGTCTAGGCCCAAGTGTAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR GCA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTTGGCGACACAGAGGTaGACAATGCATTCTTTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: RLITLSHDMPVTQGTLSSLATQR*TMHSLS Trigger: GCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTTCTTTGAGCACCTGCTaGATGCCATGTTTCTGCACG | + |
|
Preference number: 4 (lower is better) Translates to: LISHSTVDGLGMWGQAWFSLSTC*MPCFCT Trigger: CGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGA...AAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | CTTGTAAGGGAACAGAGAGACTCGGGTGAGAGGTGTTaGGAAGTCAAGGGACAGGGATTCGGGCTTTACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVREQRDSGERC*EVKGQGFGLYR Trigger: TCTGTAAAGCCCGAATCCCTGTCCCTTGACTTCCAAACACCTCTCACCCGAGTCTCTCTGTTCCCTTACAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | CTCATATCACACTCCACGGTGGATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTTCGTTGTCGTCCAGGTaGGAAAAGAGCACGTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: LISHSTVDGLGMWGQAWFSLSSR*EKSTFL Trigger: TAAGAACGTGCTCTTTTCTCACCTGGACGACAACGA...AAACCAGGCTTGACCCCACATCCCTAAACCATCCACCGTGGAGTGTGATATGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | GTTCATGCAGCGCTTGGTGACATAAATAGGGGATGGAGAAGCAGGGCCACAGAAGAGATCTCCTCATCGTaGGAATCACACTGGGAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: VHAALGDINRGWRSRATEEISSS*ESHWEF Trigger: AAACTCCCAGTGTGATTCCCACGATGAGGAGATCTC...TTCTGTGGCCCTGCTTCTCCATCCCCTATTTATGTCACCAAGCGCTGCATGAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CCA 90 bp | TGCCTTTCAACCTCTGTTTCTTCTCTCAGCTTGAGTGCTCATTTGAGGACATCTCCACGTACTCCTCATTaGGGGATCGTCGCTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CLSTSVSSLSLSAHLRTSPRTPH*GIVAGG Trigger: TCCTCCAGCGACGATCCCCCAATGAGGAGTACGTGG...AGATGTCCTCAAATGAGCACTCAAGCTGAGAGAAGAAACAGAGGTTGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| 3UTR CAA 72 bp | GCTGTCACTGCCCTGGTCTGGGGACTCAGTTGCCTCTaGCCCTTTGTTTTTGAAGAAGCACAAGATGGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: AVTALVWGLSCL*PFVFEEAQDGY Trigger: ATAACCATCTTGTGCTTCTTCAAAAACAAAGGGCAAGAGGCAACTGAGTCCCCAGACCAGGGCAGTGACAGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | GATGGTTTAGGGATGTGGGGTCAAGCCTGGTTTCAGTACATTATCCCCTCTTGTAGACAGTTAGGGAGATaGAGCTGTTGTAACGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: DGLGMWGQAWFQYIIPSCRQLGR*SCCNAG Trigger: TCCAGCGTTACAACAGCTTCATCTCCCTAACTGTCT...ACAAGAGGGGATAATGTACTGAAACCAGGCTTGACCCCACATCCCTAAACCATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR TCA 90 bp | TGCCTTTCAACCTCTGTTTCTTCTCTCAGCTTGAGTGCTCATTTGAGGACATCTCATTCCCTTGCTGTATaGCTGTTTCCCCACCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CLSTSVSSLSLSAHLRTSHSLAV*LFPHRC Trigger: ACATCGGTGGGGAAACAGTCATACAGCAAGGGAATG...AGATGTCCTCAAATGAGCACTCAAGCTGAGAGAAGAAACAGAGGTTGAAAGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | GGAAAGCCCCGCCGTCAGCCACACTTCCTGCCCAATCTGGGCGTCCAGCCAGTAAGCTTGAGGTCCGTCTaGGCCTTCACGGTAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKPRRQPHFLPNLGVQPVSLRSV*AFTVAA Trigger: AGCGGCTACCGTGAAGGCCAAGACGGACCTCAAGCT...TACTGGCTGGACGCCCAGATTGGGCAGGAAGTGTGGCTGACGGCGGGGCTTTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGAGTCCAGAGAAAGGGTAGGCTCCGGGCCGGGCACCAGCCGCACTCAGAGCTTGAGGTCCGTCTaGGCCTTCACGGTAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: KSESRERVGSGPGTSRTQSLRSV*AFTVAA Trigger: AGCGGCTACCGTGAAGGCCAAGACGGACCTCAAGCT...CTGAGTGCGGCTGGTGCCCGGCCCGGAGCCTACCCTTTCTCTGGACTCACTTTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCCACGTACTCCTCATaGGGGGATCGTCGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPSTYSS*GDRRWR Trigger: CCTCCAGCGACGATCCCCCAATGAGGAGTACGTGGA...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | GGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTGGCAGGACACAGAGCTTGAGGTCCGTCTaGGCCTTCACGGTAGCCGCT | + |
|
Preference number: 5 (lower is better) Translates to: GKATRVATAPLLRPGRTQSLRSV*AFTVAA Trigger: AGCGGCTACCGTGAAGGCCAAGACGGACCTCAAGCT...CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTCGATACCCCAGAGCTaGAGGTCCGTCTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPSIPQS*RSVLAF Trigger: GAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCGA...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | AAAAGTGAGTCCAGAGAAAGGGTAGGCTCCGGGCCGGGCACCAGCCGCACTCAGTCGATACCCCAGAGCTaGAGGTCCGTCTTGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSESRERVGSGPGTSRTQSIPQS*RSVLAF Trigger: GAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCGA...CTGAGTGCGGCTGGTGCCCGGCCCGGAGCCTACCCTTTCTCTGGACTCACTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCCAGCTCTGGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGATCTAACTTCACACACTaGAGGGGACCCCGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NSQLWGKATRVATAPLLRSNFTH*RGPRAT Trigger: GGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAGA...TCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS GCA 90 bp | TCCCGGAGGAATCGCAGTGGCCGGTCCGGCTTGGCGACACAGAGGTaGACAATGCATTCTTTGAGCACCTGCTGGATGCCATGTTTCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRRNRSGRSGLATQR*TMHSLSTCWMPCFC Trigger: GCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGACCGGCCACTGCGATTCCTCCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
||
| CDS-3UTR CAA 90 bp | AACTCCCAGCTCTGGGGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACGGGGTTTGGAGGTGTaGGGGAGATCTCCTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: NSQLWGKATRVATAPLLRRGLEV*GRSPHR Trigger: ACGATGAGGAGATCTCCCCAACACCTCCAAACCCCG...TCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCCCCAGAGCTGGGAGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCGGGGTTTGGAGGTGTaGGGGAGATCTCCTCATCGT | + |
|
Preference number: 5 (lower is better) Translates to: SWSPGDGDSAQTHHVWKARGLEV*GRSPHR Trigger: ACGATGAGGAGATCTCCCCAACACCTCCAAACCCCG...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | AATCCACAGATAGTCCACAGTGCAGGCACGACACACATGGCCAGGGCCACACAGTCCACGTACTCCTCATaGGGGGATCGTCGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: NPQIVHSAGTTHMARATQSTYSS*GDRRWR Trigger: CCTCCAGCGACGATCCCCCAATGAGGAGTACGTGGA...CTGTGTGGCCCTGGCCATGTGTGTCGTGCCTGCACTGTGGACTATCTGTGGATT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS CCA 90 bp | GCCTTGACCACGGGGTTTGGAGGTGTTGGGGAGATCTCCTCATCGTaGGAATCACACTGGGAGTTTGACTTCTGCCGAGCCAGGATCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ALTTGFGGVGEISSS*ESHWEFDFCRARIC Trigger: GCAGATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCCCAACACCTCCAAACCCCGTGGTCAAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
||
| CDS-3UTR CAA 90 bp | TCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCCCGCCGTGCACAATGCATTCTTaGAGCACCTGCTGGATGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPGDGDSAQTHHVWKAPPCTMHS*STCWMP Trigger: TGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCA...CGGCGGGGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | ATCAATTTGGGTCCTTCAGGGGTCCTTCTGAGAGTTGGGGACAGTGCGCAGGGATCTAACTTCACACACTaGAGGGGACCCCGGGCCACC | + |
|
Preference number: 5 (lower is better) Translates to: INLGPSGVLLRVGDSAQGSNFTH*RGPRAT Trigger: GGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAGA...TCCCTGCGCACTGTCCCCAACTCTCAGAAGGACCCCTGAAGGACCCAAATTGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCTTCTTAGAAATGGCCTaGGCCAGCGCGGTCATGGTC | + |
|
Preference number: 5 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGFLEMA*ASAVMV Trigger: GACCATGACCGCGCTGGCCAAGGCCATTTCTAAGAA...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
||
| CDS-3UTR CAA 90 bp | AGGTTGATCACACTGTCTCATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTCCACGTACTCCTCATaGGGGGATCGTCGCTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RLITLSHDMPVTQGTLSSSTYSS*GDRRWR Trigger: CCTCCAGCGACGATCCCCCAATGAGGAGTACGTGGA...ACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATGAGACAGTGTGATCAACCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS CCA 90 bp | GGGTTTGGAGGTGTTGGGGAGATCTCCTCATCGTGGGAATCACACTaGGAGTTTGACTTCTGCCGAGCCAGGATCTGCCTGTTTTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: GFGGVGEISSSWESH*EFDFCRARICLFSS Trigger: GGAGGAAAACAGGCAGATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCCCAACACCTCCAAACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS-3UTR CAA 90 bp | CACTCATGTGGCCCTTGGGTCTGGCTGGCTCATATCACACTCCACGGTGGATGGTGCACAATGCATTCTTaGAGCACCTGCTGGATGCCA | + |
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Preference number: 5 (lower is better) Translates to: HSCGPWVWLAHITLHGGWCTMHS*STCWMP Trigger: TGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCA...CCATCCACCGTGGAGTGTGATATGAGCCAGCCAGACCCAAGGGCCACATGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 |
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| CDS-3UTR CAA 90 bp | GGGAAAGCTACAAGGGTGGCCACAGCCCCACTCTTGAGACCTGGCAGGACACAGTCTAGGATGGAGACTTaGCTGAGGAACTCCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: GKATRVATAPLLRPGRTQSRMET*LRNSSY Trigger: GTATGAGGAGTTCCTCAGCAAAGTCTCCATCCTAGA...CTGTGTCCTGCCAGGTCTCAAGAGTGGGGCTGTGGCCACCCTTGTAGCTTTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS-3UTR CAA 90 bp | TCCTGGTCTCCAGGAGATGGGGACTCAGCCCAGACTCACCACGTTTGGAAAGCCTCTAGGATGGAGACTTaGCTGAGGAACTCCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: SWSPGDGDSAQTHHVWKASRMET*LRNSSY Trigger: GTATGAGGAGTTCCTCAGCAAAGTCTCCATCCTAGA...GGCTTTCCAAACGTGGTGAGTCTGGGCTGAGTCCCCATCTCCTGGAGACCAGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS-3UTR CAA 90 bp | CATGACATGCCGGTCACCCAGGGGACACTAAGCAGTTGTGGACACTCATGTGGCTCTAGGATGGAGACTTaGCTGAGGAACTCCTCATAC | + |
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Preference number: 5 (lower is better) Translates to: HDMPVTQGTLSSCGHSCGSRMET*LRNSSY Trigger: GTATGAGGAGTTCCTCAGCAAAGTCTCCATCCTAGA...GCCACATGAGTGTCCACAACTGCTTAGTGTCCCCTGGGTGACCGGCATGTCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS-3UTR CAA 90 bp | GACAGGGATTCGGGCTTTACAGAGAGAGTCTGGGAAGGCTCAAAACTACAACTTTCTAACTTCACACACTaGAGGGGACCCCGGGCCACC | + |
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Preference number: 5 (lower is better) Translates to: DRDSGFTERVWEGSKLQLSNFTH*RGPRAT Trigger: GGTGGCCCGGGGTCCCCTCAAGTGTGTGAAGTTAGA...AAGTTGTAGTTTTGAGCCTTCCCAGACTCTCTCTGTAAAGCCCGAATCCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS GCA 90 bp | TCCGGCTTGGCGACACAGAGGTGCACAATGCATTCTTTGAGCACCTaGTGGATGCCATGTTTCTGCACGTACATCTCGCATCCTTTCAGA | + |
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Preference number: 5 (lower is better) Translates to: SGLATQRCTMHSLST*WMPCFCTYISHPFR Trigger: TCTGAAAGGATGCGAGATGTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CCA 90 bp | GGCTTGGCGACACAGAGGTGCACAATGCATTCTTTGAGCACCTGCTaGATGCCATGTTTCTGCACGTACATCTCGCATCCTTTCAGAGAG | + |
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Preference number: 5 (lower is better) Translates to: GLATQRCTMHSLSTC*MPCFCTYISHPFRE Trigger: CTCTCTGAAAGGATGCGAGATGTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS GCA 90 bp | AGGTGCACAATGCATTCTTTGAGCACCTGCTGGATGCCATGTTTCTaGACGTACATCTCGCATCCTTTCAGAGAGTCCTCATCCTCCGAG | + |
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Preference number: 5 (lower is better) Translates to: RCTMHSLSTCWMPCF*TYISHPFRESSSSE Trigger: CTCGGAGGATGAGGACTCTCTGAAAGGATGCGAGATGTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS TCA 90 bp | AAATGGCCTTGGCCAGCGCGGTCATGGTCTTATAGTCCTTGGGAATaGCCTTCCTCACGTAGGAGACAGCATCTTCTTCAGTGTAGACTT | + |
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Preference number: 5 (lower is better) Translates to: KWPWPARSWSYSPWE*PSSRRRQHLLQCRL Trigger: AAGTCTACACTGAAGAAGATGCTGTCTCCTACGTGAGGAAGGTCATTCCCAAGGACTATAAGACCATGACCGCGCTGGCCAAGGCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000148002.8 |
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| CDS-3UTR CAA 90 bp | TGCCTTTCAACCTCTGTTTCTTCTCTCAGCTTGAGTGCTCATTTGAGGACATCTTCGATACCCCAGAGCTaGAGGTCCGTCTTGGCCTTC | + |
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Preference number: 5 (lower is better) Translates to: CLSTSVSSLSLSAHLRTSSIPQS*RSVLAF Trigger: GAAGGCCAAGACGGACCTCAAGCTCTGGGGTATCGA...AGATGTCCTCAAATGAGCACTCAAGCTGAGAGAAGAAACAGAGGTTGAAAGGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS CAA 72 bp | GAGGGTCCAAGGCGCCCCACTTCCACGTACTCCTCATaGGGGGATCGTCGCTGGAGGACTGAAGCAGTGCCC | + |
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Preference number: 6 (lower is better) Translates to: EGPRRPTSTYSS*GDRRWRTEAVP Trigger: GGGCACTGCTTCAGTCCTCCAGCGACGATCCCCCAATGAGGAGTACGTGGAAGTGGGGCGCCTTGGACCCTC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS CCA 72 bp | AGGGTCCAAGGCGCCCCACTTCCACGTACTCCTCATTaGGGGATCGTCGCTGGAGGACTGAAGCAGTGCCCT | + |
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Preference number: 6 (lower is better) Translates to: RVQGAPLPRTPH*GIVAGGLKQCP Trigger: AGGGCACTGCTTCAGTCCTCCAGCGACGATCCCCCAATGAGGAGTACGTGGAAGTGGGGCGCCTTGGACCCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS CCA 72 bp | CTCCAACTTCTCAAAGTGCTCCCGGAGGAATCGCAGTaGCCGGTCCGGCTTGGCGACACAGAGGTGCACAAT | + |
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Preference number: 6 (lower is better) Translates to: LQLLKVLPEESQ*PVRLGDTEVHN Trigger: ATTGTGCACCTCTGTGTCGCCAAGCCGGACCGGCCACTGCGATTCCTCCGGGAGCACTTTGAGAAGTTGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CAA 72 bp | AAGTGCTCCCGGAGGAATCGCAGTGGCCGGTCCGGCTaGGCGACACAGAGGTGCACAATGCATTCTTTGAGC | + |
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Preference number: 6 (lower is better) Translates to: KCSRRNRSGRSG*ATQRCTMHSLS Trigger: GCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGACCGGCCACTGCGATTCCTCCGGGAGCACTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CAA 90 bp | AACTTCTCAAAGTGCTCCCGGAGGAATCGCAGTGGCCGGTCCGGCTaGGCGACACAGAGGTGCACAATGCATTCTTTGAGCACCTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: NFSKCSRRNRSGRSG*ATQRCTMHSLSTCW Trigger: CCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGACCGGCCACTGCGATTCCTCCGGGAGCACTTTGAGAAGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CCA 72 bp | GGTGTTGGGGAGATCTCCTCATCGTGGGAATCACACTaGGAGTTTGACTTCTGCCGAGCCAGGATCTGCCTG | + |
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Preference number: 6 (lower is better) Translates to: GVGEISSSWESH*EFDFCRARICL Trigger: CAGGCAGATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCCCAACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CCA 72 bp | ACGGGGTTTGGAGGTGTTGGGGAGATCTCCTCATCGTaGGAATCACACTGGGAGTTTGACTTCTGCCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: TGFGGVGEISSS*ESHWEFDFCRA Trigger: GGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCCCAACACCTCCAAACCCCGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CAA 90 bp | AGTGGCCGGTCCGGCTTGGCGACACAGAGGTGCACAATGCATTCTTaGAGCACCTGCTGGATGCCATGTTTCTGCACGTACATCTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: SGRSGLATQRCTMHS*STCWMPCFCTYISH Trigger: ATGCGAGATGTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGACCGGCCACT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CAA 90 bp | GAGGTGTTGGGGAGATCTCCTCATCGTGGGAATCACACTGGGAGTTaGACTTCTGCCGAGCCAGGATCTGCCTGTTTTCCTCCTTCTCCA | + |
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Preference number: 6 (lower is better) Translates to: EVLGRSPHRGNHTGS*TSAEPGSACFPPSP Trigger: TGGAGAAGGAGGAAAACAGGCAGATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCCCAACACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 6 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS TCA 72 bp | CACGTACTCCTCATTGGGGGATCGTCGCTGGAGGACTaGAGCAGTGCCCTCTGTGATGATGTAGAAGTCATC | + |
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Preference number: 6 (lower is better) Translates to: HVLLIGGSSLED*SSALCDDVEVI Trigger: GATGACTTCTACATCATCACAGAGGGCACTGCTTCAGTCCTCCAGCGACGATCCCCCAATGAGGAGTACGTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 |
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| CDS CAA 72 bp | TCCGGCTTGGCGACACAGAGGTGCACAATGCATTCTTaGAGCACCTGCTGGATGCCATGTTTCTGCACGTAC | + |
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Preference number: 6 (lower is better) Translates to: SGLATQRCTMHS*STCWMPCFCTY Trigger: GTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGCCAAGCCGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS CAA 72 bp | GGGAGATCTCCTCATCGTGGGAATCACACTGGGAGTTaGACTTCTGCCGAGCCAGGATCTGCCTGTTTTCCT | + |
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Preference number: 6 (lower is better) Translates to: GRSPHRGNHTGS*TSAEPGSACFP Trigger: AGGAAAACAGGCAGATCCTGGCTCGGCAGAAGTCAAACTCCCAGTGTGATTCCCACGATGAGGAGATCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS TCA 72 bp | TGGCCAGCGCGGTCATGGTCTTATAGTCCTTGGGAATaGCCTTCCTCACGTAGGAGACAGCATCTTCTTCAG | + |
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Preference number: 6 (lower is better) Translates to: WPARSWSYSPWE*PSSRRRQHLLQ Trigger: CTGAAGAAGATGCTGTCTCCTACGTGAGGAAGGTCATTCCCAAGGACTATAAGACCATGACCGCGCTGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000148002.8 |
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| CDS GCA 72 bp | GCGACACAGAGGTGCACAATGCATTCTTTGAGCACCTaGTGGATGCCATGTTTCTGCACGTACATCTCGCAT | + |
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Preference number: 6 (lower is better) Translates to: ATQRCTMHSLST*WMPCFCTYISH Trigger: ATGCGAGATGTACGTGCAGAAACATGGCATCCAGCAGGTGCTCAAAGAATGCATTGTGCACCTCTGTGTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 7 transcripts: ENSMUST00000026973.14 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000134762.2 ENSMUST00000147505.8 ENSMUST00000148002.8 ENSMUST00000155833.8 |
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| CDS TCA 72 bp | TCATTCCCTTGCTGTATGACTGTTTCCCCACCGATGTaGGTGACAGGAAACATGGCGTCAAATATGTCACTT | + |
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Preference number: 6 (lower is better) Translates to: SFPCCMTVSPPM*VTGNMASNMSL Trigger: AAGTGACATATTTGACGCCATGTTTCCTGTCACTCACATCGGTGGGGAAACAGTCATACAGCAAGGGAATGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000026973.14 ENSMUST00000110889.8 ENSMUST00000110890.8 ENSMUST00000129851.8 ENSMUST00000148002.8 |
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