Pregenerated sensors for PRKAR1A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020612Ensembl transcript IDs: ENSMUST00000049527.7, ENSMUST00000106676.8, ENSMUST00000106677.8
Found 92 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCACCACTGTTCCTAACAGAAACCCAGGGGACAGACCCAGCTTCCTaGTTCTGGACACCTGACCGCCATCCACCTTCAGCAGCACTGCCT | + |
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Preference number: 1 (lower is better) Translates to: PPLFLTETQGTDPAS*FWTPDRHPPSAALP Trigger: AGGCAGTGCTGCTGAAGGTGGATGGCGGTCAGGTGTCCAGAAGCAGGAAGCTGGGTCTGTCCCCTGGGTTTCTGTTAGGAACAGTGGTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR GCA 90 bp | GAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTaGTTAAATTCGCCCACCCATCCAGAGACAATGGTGCCAAGAGTC | + |
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Preference number: 1 (lower is better) Translates to: ETATVPLASSAFSAD*LNSPTHPETMVPRV Trigger: GACTCTTGGCACCATTGTCTCTGGATGGGTGGGCGAATTTAAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR TCA 90 bp | ACTGAGGGCAGATCACACGAGTTAACCACGGTTAACTCCCCAGAGTaGAGACCTCAAATTCTCACATTTCTGTGTCTCATCCTCAGGATT | + |
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Preference number: 1 (lower is better) Translates to: TEGRSHELTTVNSPE*RPQILTFLCLILRI Trigger: AATCCTGAGGATGAGACACAGAAATGTGAGAATTTGAGGTCTTCACTCTGGGGAGTTAACCGTGGTTAACTCGTGTGATCTGCCCTCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR CCA 90 bp | CACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTGCAGATGTaGCTAATTAATCAACAAAAAGGACATGAGAATTACCATTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: HSHVTVRLAWVALQM*LINQQKGHENYHSE Trigger: TTCAGAATGGTAATTCTCATGTCCTTTTTGTTGATTAATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTAGAAAGCAGTCTGCGTaGGTGAAGCATGGACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIRKQSA*VKHGLG Trigger: CCCCAGTCCATGCTTCACTCACGCAGACTGCTTTCT...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTTGCACAGAGAAGCGGTaGCAGCCAAGTCCATACAAC | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLCTEKR*QPSPYN Trigger: GTTGTATGGACTTGGCTGTCACCGCTTCTCTGTGCA...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCCCTAGTCTGTAACTaGGGGCAGATCACACGAGTT | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIALVCN*GQITRV Trigger: AACTCGTGTGATCTGCCCTCAGTTACAGACTAGGGC...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCGAAGCTGTGAAGCAGTaGCCACTGGGCGCTGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: CVSSSGFGTSWINKVISVEAVKQ*PLGAAA Trigger: AGCCGCAGCGCCCAGTGGCCACTGCTTCACAGCTTC...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR CAA 90 bp | GGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATaGCTTAAATTCGCCCACCCATCCAGAGACAATGGTGCCAAGAGT | + |
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Preference number: 2 (lower is better) Translates to: GNSNCPFGQLCFLSR*LKFAHPSRDNGAKS Trigger: ACTCTTGGCACCATTGTCTCTGGATGGGTGGGCGAATTTAAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGCTGCTTCTGGACACCTaGCCGCCATCCACCTTCAGC | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWLLLDT*PPSTFS Trigger: GCTGAAGGTGGATGGCGGTCAGGTGTCCAGAAGCAG...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGGAGAGAAAGCAGTCTaGGTGAGTGAAGCATGGACT | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIGEKAV*VSEAWT Trigger: AGTCCATGCTTCACTCACGCAGACTGCTTTCTCTCC...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGGAAGCTGTGAAGCAGTaGCCACTGGGCGCTGCGGCT | + |
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Preference number: 2 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAEAVKQ*PLGAAA Trigger: AGCCGCAGCGCCCAGTGGCCACTGCTTCACAGCTTC...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGAGAGACAAGAAGCTGTaGAGCAGTGGCCACTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWRDKKL*SSGHWA Trigger: CGCCCAGTGGCCACTGCTTCACAGCTTCTTGTCTCT...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGCAGGACTCAGCGGGGTaGCCTTTCAGACCACAACAC | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWQDSAG*PFRPQH Trigger: GTGTTGTGGTCTGAAAGGCCACCCCGCTGAGTCCTG...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATAGAGACAAGAAGCTGTaGAGCAGTGGCCACTGGGCG | + |
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Preference number: 2 (lower is better) Translates to: TNDFKLKGRDRRPATPKHRDKKL*SSGHWA Trigger: CGCCCAGTGGCCACTGCTTCACAGCTTCTTGTCTCT...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGCACCTTCAGCAGCACTaGCTCCATCCCCTTCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWHLQQH*LHPLLS Trigger: AGAGAGAAGGGGATGGAGGCAGTGCTGCTGAAGGTG...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTTGCGTGAGTGAAGCATaGACTGGGGAGGAGGCACAG | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTCVSEA*TGEEAQ Trigger: CTGTGCCTCCTCCCCAGTCCATGCTTCACTCACGCA...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGAGAAAGCAGTCTGCGTaGGTGAAGCATGGACTGGGG | + |
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Preference number: 2 (lower is better) Translates to: KKVYQRNSRLDRKRQDSARKQSA*VKHGLG Trigger: CCCCAGTCCATGCTTCACTCACGCAGACTGCTTTCT...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGGCCCTAGTCTGTAACTaGGGGCAGATCACACGAGTT | + |
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Preference number: 2 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAALVCN*GQITRV Trigger: AACTCGTGTGATCTGCCCTCAGTTACAGACTAGGGC...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGGGGGTATATACACATaGAATGCATTTTATGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIGGIYT*NAFYGV Trigger: AACGCCATAAAATGCATTTCATGTGTATATACCCCC...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTTTAATCAGAACCACTTaGACACACATGAAAACGCAG | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLLIRTT*THMKTQ Trigger: CTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAA...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTGTCACTTGTGTCATATaGAAATGGAAACCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLVTCVI*KWKPVS Trigger: TGACACAGGTTTCCATTTCCATATGACACAAGTGAC...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGGATTTGGCACCAGCTaGATAAATAAAGTTATCAGC | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIGFGTS*INKVIS Trigger: GCTGATAACTTTATTTATCCAGCTGGTGCCAAATCC...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR CAA 90 bp | CAGGAGGCACACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTaGCAGATGTGGCTAATTAATCAACAAAAAGGACATGAGAATTAC | + |
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Preference number: 2 (lower is better) Translates to: QEAHSHVTVRLAWVA*QMWLINQQKGHENY Trigger: GTAATTCTCATGTCCTTTTTGTTGATTAATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTGTGCCTCCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
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| 3UTR-3UTR TCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTACCACGACTTCTGACTaGTATTTAAATTGCACAAAG | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLTTTSD*YLNCTK Trigger: CTTTGTGCAATTTAAATATCAGTCAGAAGTCGTGGT...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGGAGAGAAAGCAGTCTaGGTGAGTGAAGCATGGACT | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTGEKAV*VSEAWT Trigger: AGTCCATGCTTCACTCACGCAGACTGCTTTCTCTCC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGTGAGCTCAGACAGGTaGAGTGAAGTCACAACCAGT | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTVSSDR*SEVTTS Trigger: ACTGGTTGTGACTTCACTGCACCTGTCTGAGCTCAC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTAAAACATTTCAGGGTTaGAGAAGAAACACTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: VSRKQQLSLWPALLSQQIKTFQG*RRNTSN Trigger: GTTGCTAGTGTTTCTTCTCCAACCCTGAAATGTTTT...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGCCATCCCCTTCTCTCTaGAGCTTGCTCTATTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWPSPSL*SLLYLS Trigger: AGACAAATAGAGCAAGCTCCAGAGAGAAGGGGATGG...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTGCTCCCAATGAAAAATaGTGCAATAAAGCAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLAPNEK*CNKATF Trigger: AAAAGTTGCTTTATTGCACCATTTTTCATTGGGAGC...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTTGTGTCATATGGAAATaGAAACCTGTGTCACTTAAA | + |
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Preference number: 2 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLCVIWK*KPVSLK Trigger: TTTAAGTGACACAGGTTTCCATTTCCATATGACACA...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTCCATCCCCTTCTCTCTaGAGCTTGCTCTATTTGTCT | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTPSPSL*SLLYLS Trigger: AGACAAATAGAGCAAGCTCCAGAGAGAAGGGGATGG...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR TCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGGGGGGTATATACACATaGAATGCATTTTATGGCGTT | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWGGIYT*NAFYGV Trigger: AACGCCATAAAATGCATTTCATGTGTATATACCCCC...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 42% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGGTCACAACCAGTACTTaGCATCTACAAATGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWVTTST*HLQMIS Trigger: TGAAATCATTTGTAGATGGCAAGTACTGGTTGTGAC...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGTCACTTGTGTCATATaGAAATGGAAACCTGTGTCA | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTVTCVI*KWKPVS Trigger: TGACACAGGTTTCCATTTCCATATGACACAAGTGAC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCAAAACATTTCAGGGTTaGAGAAGAAACACTAGCAAC | + |
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Preference number: 2 (lower is better) Translates to: CVSSSGFGTSWINKVISVKTFQG*RRNTSN Trigger: GTTGCTAGTGTTTCTTCTCCAACCCTGAAATGTTTT...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGGGATTTGGCACCAGCTaGATAAATAAAGTTATCAGC | + |
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Preference number: 2 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAGFGTS*INKVIS Trigger: GCTGATAACTTTATTTATCCAGCTGGTGCCAAATCC...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGTCACAACCAGTACTTaGCATCTACAAATGATTTCA | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTVTTST*HLQMIS Trigger: TGAAATCATTTGTAGATGGCAAGTACTGGTTGTGAC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCGCTCCCAATGAAAAATaGTGCAATAAAGCAACTTTT | + |
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Preference number: 2 (lower is better) Translates to: CVSSSGFGTSWINKVISVAPNEK*CNKATF Trigger: AAAAGTTGCTTTATTGCACCATTTTTCATTGGGAGC...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTTGTGTCATATGGAAATaGAAACCTGTGTCACTTAAA | + |
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Preference number: 2 (lower is better) Translates to: REGIINQNHLHTHENAVTCVIWK*KPVSLK Trigger: TTTAAGTGACACAGGTTTCCATTTCCATATGACACA...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR GCA 72 bp | CAGCAGCACTGCCTCCATCCCCTTCTCTCTGGAGCTTaGTCTATTTGTCTATTCTCAGTAATTCCAACGCCC | + |
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Preference number: 3 (lower is better) Translates to: QQHCLHPLLSGA*SICLFSVIPTP Trigger: GGGCGTTGGAATTACTGAGAATAGACAAATAGAGCAAGCTCCAGAGAGAAGGGGATGGAGGCAGTGCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR GCA 72 bp | ACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTaGTTAAATTCGCCCACCCATCCAGAGACAATGGTG | + |
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Preference number: 3 (lower is better) Translates to: TVPLASSAFSAD*LNSPTHPETMV Trigger: CACCATTGTCTCTGGATGGGTGGGCGAATTTAAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR GCA 72 bp | TGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTaGTTTCTCAGCAGATTGCTTAAATTCGCCCACCCA | + |
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Preference number: 3 (lower is better) Translates to: CPGNSNCPFGQL*FLSRLLKFAHP Trigger: TGGGTGGGCGAATTTAAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| 3UTR-3UTR CAA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGCACTTGCTGCCCAGGTaGAACACGAGCACTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAHLLPR*NTSTAQ Trigger: CTGTGCAGTGCTCGTGTTCAACCTGGGCAGCAAGTG...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTCACTTGCTGCCCAGGTaGAACACGAGCACTGCACAG | + |
|
Preference number: 3 (lower is better) Translates to: REGIINQNHLHTHENAVTHLLPR*NTSTAQ Trigger: CTGTGCAGTGCTCGTGTTCAACCTGGGCAGCAAGTG...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGCAAAAAGCGCGGCACTaGCTGCCCAGGTTGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAQKARH*LPRLNT Trigger: CGTGTTCAACCTGGGCAGCAAGTGCCGCGCTTTTTG...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR-3UTR CAA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATCAAAAAGCGCGGCACTaGCTGCCCAGGTTGAACACG | + |
|
Preference number: 3 (lower is better) Translates to: TNDFKLKGRDRRPATPKHQKARH*LPRLNT Trigger: CGTGTTCAACCTGGGCAGCAAGTGCCGCGCTTTTTG...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR TCA 72 bp | AGATCACACGAGTTAACCACGGTTAACTCCCCAGAGTaGAGACCTCAAATTCTCACATTTCTGTGTCTCATC | + |
|
Preference number: 3 (lower is better) Translates to: RSHELTTVNSPE*RPQILTFLCLI Trigger: GATGAGACACAGAAATGTGAGAATTTGAGGTCTTCACTCTGGGGAGTTAACCGTGGTTAACTCGTGTGATCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR GCA 72 bp | GGAAAGGGAGGGAGGGAATTATTAATCAGAACCACTTaGACACACATGAAAACGCAGTCACTCCCAAATAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKGGRELLIRTT*THMKTQSLPNR Trigger: TCTATTTGGGAGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCTCCCTTTCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTCCTTCTCTCTGGAGCTaGCTCTATTTGTCTATTCTC | + |
|
Preference number: 3 (lower is better) Translates to: REGIINQNHLHTHENAVTPSLWS*LYLSIL Trigger: GAGAATAGACAAATAGAGCAAGCTCCAGAGAGAAGG...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR CCA 72 bp | ACATGGCCACAGTCTAAGTATGTCACTTGTGTCATATaGAAATGGAAACCTGTGTCACTTAAAAGCCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: TWPQSKYVTCVI*KWKPVSLKSPA Trigger: TGCAGGGCTTTTAAGTGACACAGGTTTCCATTTCCATATGACACAAGTGACATACTTAGACTGTGGCCATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR CCA 72 bp | GTAACAGTCAGGCTAGCATGGGTGGCTTTGCAGATGTaGCTAATTAATCAACAAAAAGGACATGAGAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: VTVRLAWVALQM*LINQQKGHENY Trigger: GTAATTCTCATGTCCTTTTTGTTGATTAATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| 3UTR TCA 72 bp | GTTTATCTCCGTACAGACCAAGGGGGTATATACACATaGAATGCATTTTATGGCGTTCTACATCATTCACAT | + |
|
Preference number: 3 (lower is better) Translates to: VYLRTDQGGIYT*NAFYGVLHHSH Trigger: ATGTGAATGATGTAGAACGCCATAAAATGCATTTCATGTGTATATACCCCCTTGGTCTGTACGGAGATAAAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR GCA 72 bp | TCTCCGTACAGACCAAGGGGGTATATACACATGAAATaGATTTTATGGCGTTCTACATCATTCACATACATA | + |
|
Preference number: 3 (lower is better) Translates to: SPYRPRGYIHMK*ILWRSTSFTYI Trigger: TATGTATGTGAATGATGTAGAACGCCATAAAATGCATTTCATGTGTATATACCCCCTTGGTCTGTACGGAGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTCCGCTTGAGGATGTCTaGGCACGGGCCAAGGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLPLEDV*ARAKDA Trigger: CGCGTCCTTGGCCCGTGCTCAGACATCCTCAAGCGG...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTCCCGGGCAACCACAGTaGCAGCCCGAGGACGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLPGQPQ*QPEDDS Trigger: TGAATCGTCCTCGGGCTGCCACTGTGGTTGCCCGGG...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTCCCGGGCAACCACAGTaGCAGCCCGAGGACGATTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSRKQQLSLWPALLSQQIPGQPQ*QPEDDS Trigger: TGAATCGTCCTCGGGCTGCCACTGTGGTTGCCCGGG...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCCCGCTTGAGGATGTCTaGGCACGGGCCAAGGACGCG | + |
|
Preference number: 4 (lower is better) Translates to: CVSSSGFGTSWINKVISVPLEDV*ARAKDA Trigger: CGCGTCCTTGGCCCGTGCTCAGACATCCTCAAGCGG...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | GCTTCTACAGGAGGCACACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTCAGCCCTTACCTTGCTaGATAACCGTCTCTCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ASTGGTQPCNSQASMGGFQPLPC*ITVSPA Trigger: TGCTGGAGAGACGGTTATTCAGCAAGGTAAGGGCTG...AAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTGTGCCTCCTGTAGAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTCTGGACAGGCTCCAATaGATCGGCTACTGTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: VSRKQQLSLWPALLSQQILDRLQ*IGYCET Trigger: CGTCTCACAGTAGCCGATGCATTGGAGCCTGTCCAG...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTCCTTCACCACTGGATTaGGGGGTGGAGGAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: VSRKQQLSLWPALLSQQIPSPLD*GVEERS Trigger: AGATCTCTCCTCCACCCCCCAATCCAGTGGTGAAGG...AATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGGACAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTAGCTGTCTCGGTCGATaGCCCACAGTTTCACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLSCLGR*PTVSRL Trigger: CAAACGTGAAACTGTGGGGCATCGACCGAGACAGCT...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | GCTTCTACAGGAGGCACACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTTCCTTCAGCAGGGCCTaGATATTGTGCTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: ASTGGTQPCNSQASMGGFSFSRA*ILCFCT Trigger: TGTGCAGAAGCACAATATCCAGGCCCTGCTGAAGGA...AAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTGTGCCTCCTGTAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTGCAGATGTGGCTAATTCCTTCACCACTGGATTaGGGGGTGGAGGAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVTVRLAWVALQMWLIPSPLD*GVEERS Trigger: AGATCTCTCCTCCACCCCCCAATCCAGTGGTGAAGG...AATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR TCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGGCTGGATGTTCCGCTTaGGGATGTCTGAGCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWAGCSA*GCLSTG Trigger: GCCCGTGCTCAGACATCCTCAAGCGGAACATCCAGC...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTACGAAGCTGTTGTACTaGTGGATGTTCCGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLTKLLY*WMFRLR Trigger: CCTCAAGCGGAACATCCAGCAGTACAACAGCTTCGT...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGGCTGGATGTTCCGCTTaGGGATGTCTGAGCACGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KKVYQRNSRLDRKRQDSAAGCSA*GCLSTG Trigger: GCCCGTGCTCAGACATCCTCAAGCGGAACATCCAGC...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGTTTTCTGACCGACGCTaGAGCACAGCAGCTGTGCCC | + |
|
Preference number: 4 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWFSDRR*STAAVP Trigger: GGGCACAGCTGCTGTGCTGCAGCGTCGGTCAGAAAA...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR CAA 72 bp | AACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATaGCTTAAATTCGCCCACCCATCCAGAGACAATGGT | + |
|
Preference number: 4 (lower is better) Translates to: NCPFGQLCFLSR*LKFAHPSRDNG Trigger: ACCATTGTCTCTGGATGGGTGGGCGAATTTAAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTTCTTTTCGATGGCCTTaGCTAAAGCAGCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLSFRWP*LKQPLS Trigger: AGACAATGGCTGCTTTAGCCAAGGCCATCGAAAAGA...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATCTGGACAGGCTCCAATaGATCGGCTACTGTGAGACG | + |
|
Preference number: 4 (lower is better) Translates to: TNDFKLKGRDRRPATPKHLDRLQ*IGYCET Trigger: CGTCTCACAGTAGCCGATGCATTGGAGCCTGTCCAG...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATCCTTCACCACTGGATTaGGGGGTGGAGGAGAGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TNDFKLKGRDRRPATPKHPSPLD*GVEERS Trigger: AGATCTCTCCTCCACCCCCCAATCCAGTGGTGAAGG...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | CACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTGCAGATGTGGCTAATTTCTTTTCGATGGCCTTaGCTAAAGCAGCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVTVRLAWVALQMWLISFRWP*LKQPLS Trigger: AGACAATGGCTGCTTTAGCCAAGGCCATCGAAAAGA...AATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTCGTTTGTCTTTGCTTTaGCAGTGGCTGCTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: REGIINQNHLHTHENAVTRLSLL*QWLLWV Trigger: CACCCAGAGCAGCCACTGTCAAAGCAAAGACAAACG...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGCGTTTGTCTTTGCTTTaGCAGTGGCTGCTCTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: KKVYQRNSRLDRKRQDSARLSLL*QWLLWV Trigger: CACCCAGAGCAGCCACTGTCAAAGCAAAGACAAACG...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATGCAGAGTGCTTCCCATaGGGATTCTTCGGTAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: TNDFKLKGRDRRPATPKHAECFP*GFFGSC Trigger: ACAGCTACCGAAGAATCCTCATGGGAAGCACTCTGC...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | AAGAAAGTTTACCAGAGAAATTCAAGGTTAGACAGGAAAAGGCAGGACTCAGCGAGCTGTCTCGGTCGATaGCCCACAGTTTCACGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: KKVYQRNSRLDRKRQDSASCLGR*PTVSRL Trigger: CAAACGTGAAACTGTGGGGCATCGACCGAGACAGCT...CGCTGAGTCCTGCCTTTTCCTGTCTAACCTTGAATTTCTCTGGTAAACTTTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR GCA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCACGAAGCTGTTGTACTaGTGGATGTTCCGCTTGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVSSSGFGTSWINKVISVTKLLY*WMFRLR Trigger: CCTCAAGCGGAACATCCAGCAGTACAACAGCTTCGT...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | ACAAATGATTTCAAACTTAAAGGCAGGGATAGACGGCCAGCCACACCAAAACATTCCTTCAGCAGGGCCTaGATATTGTGCTTCTGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TNDFKLKGRDRRPATPKHSFSRA*ILCFCT Trigger: TGTGCAGAAGCACAATATCCAGGCCCTGCTGAAGGA...ATGTTTTGGTGTGGCTGGCCGTCTATCCCTGCCTTTAAGTTTGAAATCATTTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR TCA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGTTTTCTGTAGACACTaGATCTGTCTTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: REGIINQNHLHTHENAVTVFCRH*ICLASS Trigger: GGAGGAGGCAAGACAGATTCAGTGTCTACAGAAAAC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CCA 90 bp | ATTAGCACAGAGTATATCAGACTAGTGTCCAGGAAACAGCAACTGTCCCTTTGGTCTTTTCGATGGCCTTaGCTAAAGCAGCCATTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ISTEYIRLVSRKQQLSLWSFRWP*LKQPLS Trigger: AGACAATGGCTGCTTTAGCCAAGGCCATCGAAAAGA...CCAAAGGGACAGTTGCTGTTTCCTGGACACTAGTCTGATATACTCTGTGCTAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| 3UTR CAA 72 bp | CACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTaGCAGATGTGGCTAATTAATCAACAAAAAGGACAT | + |
|
Preference number: 4 (lower is better) Translates to: HSHVTVRLAWVA*QMWLINQQKGH Trigger: ATGTCCTTTTTGTTGATTAATTAGCCACATCTGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR TCA 90 bp | CACAATATCCAATGTAGCATAGGTATTCCCTTTGATGGTGACTATAAGTTGTCAGTTTTCTGTAGACACTaGATCTGTCTTGCCTCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: HNIQCSIGIPFDGDYKLSVFCRH*ICLASS Trigger: GGAGGAGGCAAGACAGATTCAGTGTCTACAGAAAAC...TGACAACTTATAGTCACCATCAAAGGGAATACCTATGCTACATTGGATATTGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| 3UTR CAA 72 bp | TGTAGCATAGGTATTCCCTTTGATGGTGACTATAAGTaGTCAGAAATATTAATCCTATGCGTTCCTTTTAAC | + |
|
Preference number: 4 (lower is better) Translates to: CSIGIPFDGDYK*SEILILCVPFN Trigger: GTTAAAAGGAACGCATAGGATTAATATTTCTGACAACTTATAGTCACCATCAAAGGGAATACCTATGCTACA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR CAA 90 bp | TCTACAGGAGGCACACAGCCATGTAACAGTCAGGCTAGCATGGGTGGCTTTGCATCAGCAGCCCTTACCTaGCTGAATAACCGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STGGTQPCNSQASMGGFASAALT*LNNRLS Trigger: GGAGAGACGGTTATTCAGCAAGGTAAGGGCTGCTGA...TGCAAAGCCACCCATGCTAGCCTGACTGTTACATGGCTGTGTGCCTCCTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR CAA 90 bp | CCAGGAAACAGCAACTGTCCCTTTGGCCAGCTCTGCTTTCTCAGCAGATTGCTTATCCCCTTCATCACCTaGCTGAATAACCGTCTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGNSNCPFGQLCFLSRLLIPFIT*LNNRLS Trigger: GGAGAGACGGTTATTCAGCAAGGTGATGAAGGGGAT...AAGCAATCTGCTGAGAAAGCAGAGCTGGCCAAAGGGACAGTTGCTGTTTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
||
| CDS-3UTR CAA 90 bp | GAAAGACCCAATACTCATGCTAAGACCCAACACACTCACACCTGTGCACATACAGACACTGAATCTGTCTaGCCTCCTCCTTCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: ERPNTHAKTQHTHTCAHTDTESV*PPPSPT Trigger: GGTTGGAGAAGGAGGAGGCAAGACAGATTCAGTGTC...TGTATGTGCACAGGTGTGAGTGTGTTGGGTCTTAGCATGAGTATTGGGTCTTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000106676.8 |
||
| CDS-3UTR CAA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCGACACTGAATCTGTCTaGCCTCCTCCTTCTCCAACC | + |
|
Preference number: 5 (lower is better) Translates to: CVSSSGFGTSWINKVISVDTESV*PPPSPT Trigger: GGTTGGAGAAGGAGGAGGCAAGACAGATTCAGTGTC...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| CDS-3UTR CAA 90 bp | AGGGAGGGAATTATTAATCAGAACCACTTGCACACACATGAAAACGCAGTCACTGACACTGAATCTGTCTaGCCTCCTCCTTCTCCAACC | + |
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Preference number: 5 (lower is better) Translates to: REGIINQNHLHTHENAVTDTESV*PPPSPT Trigger: GGTTGGAGAAGGAGGAGGCAAGACAGATTCAGTGTC...AGTGACTGCGTTTTCATGTGTGTGCAAGTGGTTCTGATTAATAATTCCCTCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| CDS-3UTR CAA 90 bp | TGTGTCTCATCCTCAGGATTTGGCACCAGCTGGATAAATAAAGTTATCAGCGTCATCCCCTTCATCACCTaGCTGAATAACCGTCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: CVSSSGFGTSWINKVISVIPFIT*LNNRLS Trigger: GGAGAGACGGTTATTCAGCAAGGTGATGAAGGGGAT...GACGCTGATAACTTTATTTATCCAGCTGGTGCCAAATCCTGAGGATGAGACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000049527.7 ENSMUST00000106677.8 |
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| CDS GCA 72 bp | AATGCCATGGGCCTCTCGGGCCGCGTAGTGCACAGCTaGACGATGGAGTCCTTCAGCAGGGCCTGGATATTG | + |
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Preference number: 6 (lower is better) Translates to: NAMGLSGRVVHS*TMESFSRAWIL Trigger: CAATATCCAGGCCCTGCTGAAGGACTCCATCGTGCAGCTGTGCACTACGCGGCCCGAGAGGCCCATGGCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000049527.7 ENSMUST00000106676.8 ENSMUST00000106677.8 |
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| CDS GCA 72 bp | GAGGAGAGATCTCGTCCTCCCTCGAGTCAGTACGGATaGCGGTTTTCTGTAGACACTGAATCTGTCTTGCCT | + |
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Preference number: 6 (lower is better) Translates to: EERSRPPSSQYG*RFSVDTESVLP Trigger: AGGCAAGACAGATTCAGTGTCTACAGAAAACCGGCATCCGTACTGACTCGAGGGAGGACGAGATCTCTCCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000049527.7 ENSMUST00000106676.8 ENSMUST00000106677.8 |
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