Pregenerated sensors for PRKAG1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067713Ensembl transcript IDs: ENSMUST00000168846.3, ENSMUST00000229297.2, ENSMUST00000230560.2
Found 50 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCTCACCCAGAAGGGGGCTGCGGCAGGCGCGGGCCTGGACTGGCTaGGCTGACGTTCTCTCCAGTGTAACAGGACGGTCAGGGAGGCTG | + |
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Preference number: 1 (lower is better) Translates to: GSPRRGLRQARAWTG*ADVLSSVTGRSGRL Trigger: CAGCCTCCCTGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGTCCAGGCCCGCGCCTGCCGCAGCCCCCTTCTGGGTGAGCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR TCA 90 bp | ACCCAGAAGGGGGCTGCGGCAGGCGCGGGCCTGGACTGGCTGGGCTaGCGTTCTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACAGT | + |
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Preference number: 1 (lower is better) Translates to: TQKGAAAGAGLDWLG*RSLQCNRTVREADS Trigger: ACTGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGTCCAGGCCCGCGCCTGCCGCAGCCCCCTTCTGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR CCA 90 bp | AAAGCCCGTGGCTCACCCAGAAGGGGGCTGCGGCAGGCGCGGGCCTaGACTGGCTGGGCTGACGTTCTCTCCAGTGTAACAGGACGGTCA | + |
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Preference number: 1 (lower is better) Translates to: KARGSPRRGLRQARA*TGWADVLSSVTGRS Trigger: TGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGTCCAGGCCCGCGCCTGCCGCAGCCCCCTTCTGGGTGAGCCACGGGCTTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR CCA 90 bp | TTCGTCTGCACAGCACAAGAACCCGGACGCGCCTCCCTAGACTCATaGGAAGGACTGACAGCAAATGGGCCCAGCCTCCTCCACACAGTG | + |
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Preference number: 1 (lower is better) Translates to: FVCTAQEPGRASLDS*EGLTANGPSLLHTV Trigger: CACTGTGTGGAGGAGGCTGGGCCCATTTGCTGTCAGTCCTTCCCATGAGTCTAGGGAGGCGCGTCCGGGTTCTTGTGCTGTGCAGACGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR GCA 90 bp | ATTAATCTTGGCTACCTACCCACCGCCCTCCTCCACATAGCCATCTaGCTTCGTCTGCACAGCACAAGAACCCGGACGCGCCTCCCTAGA | + |
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Preference number: 1 (lower is better) Translates to: INLGYLPTALLHIAI*LRLHSTRTRTRLPR Trigger: TCTAGGGAGGCGCGTCCGGGTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAGGTAGCCAAGATTAAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR CCA 90 bp | GTGAGGTCTAGGGATCTCGTAGAGATCAGAATCTACCCGAGGAGCACAAAGCCCCGGCAGGCGCGGGCCTaGACTGGCTGGGCTGACGTT | + |
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Preference number: 2 (lower is better) Translates to: VRSRDLVEIRIYPRSTKPRQARA*TGWADV Trigger: AACGTCAGCCCAGCCAGTCCAGGCCCGCGCCTGCCG...GGGCTTTGTGCTCCTCGGGTAGATTCTGATCTCTACGAGATCCCTAGACCTCAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGCTACCTACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCAAGGACTGACAGCAAATaGGCCCAGCCTCCTCCACAC | + |
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Preference number: 2 (lower is better) Translates to: SWLPTHRPPPHSHLPSSARTDSK*AQPPPH Trigger: GTGTGGAGGAGGCTGGGCCCATTTGCTGTCAGTCCT...TGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAGGTAGCCAAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR TCA 90 bp | CTCCTCCTTTCCCCTTCTCTAGCTCTAGACAGTGGGCGTGGAGCTCCTGAGAGATCCCAGGATTCCATCTaGTTCCCAGAGCTTCCAGCA | + |
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Preference number: 2 (lower is better) Translates to: LLLSPSLALDSGRGAPERSQDSI*FPELPA Trigger: TGCTGGAAGCTCTGGGAATCAGATGGAATCCTGGGA...TCTCTCAGGAGCTCCACGCCCACTGTCTAGAGCTAGAGAAGGGGAAAGGAGGAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR CCA 90 bp | TCTTGGCTACCTACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCAGCCTCCCTAGACTCATaGGAAGGACTGACAGCAAAT | + |
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Preference number: 2 (lower is better) Translates to: SWLPTHRPPPHSHLPSSAASLDS*EGLTAN Trigger: ATTTGCTGTCAGTCCTTCCCATGAGTCTAGGGAGGC...TGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAGGTAGCCAAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR GCA 90 bp | ACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCACAGCACAAGAACTTTTACCGAGACTTGTaGAGAGCTATTATCTTAGGT | + |
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Preference number: 2 (lower is better) Translates to: THRPPPHSHLPSSAQHKNFYRDL*RAIILG Trigger: ACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAA...GTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR-3UTR TCA 90 bp | ACGAATAAAAATATTTTACCGAGACTTGTGCAGAGCTATTATCTTAGGTGGAGTCTGGACTGGCTGGGCTaGCGTTCTCTCCAGTGTAAC | + |
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Preference number: 2 (lower is better) Translates to: TNKNILPRLVQSYYLRWSLDWLG*RSLQCN Trigger: GTTACACTGGAGAGAACGTCAGCCCAGCCAGTCCAG...ACTCCACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAATATTTTTATTCGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR GCA 72 bp | AGGAGCACAAAGCCCGTGGCTCACCCAGAAGGGGGCTaGGGCAGGCGCGGGCCTGGACTGGCTGGGCTGACG | + |
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Preference number: 3 (lower is better) Translates to: RSTKPVAHPEGG*GRRGPGLAGLT Trigger: CGTCAGCCCAGCCAGTCCAGGCCCGCGCCTGCCGCAGCCCCCTTCTGGGTGAGCCACGGGCTTTGTGCTCCT 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR GCA 72 bp | GGCTACCTACCCACCGCCCTCCTCCACATAGCCATCTaGCTTCGTCTGCACAGCACAAGAACCCGGACGCGC | + |
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Preference number: 3 (lower is better) Translates to: GYLPTALLHIAI*LRLHSTRTRTR Trigger: GCGCGTCCGGGTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAGGTAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR CCA 72 bp | ACAGCACAAGAACCCGGACGCGCCTCCCTAGACTCATaGGAAGGACTGACAGCAAATGGGCCCAGCCTCCTC | + |
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Preference number: 3 (lower is better) Translates to: TAQEPGRASLDS*EGLTANGPSLL Trigger: GAGGAGGCTGGGCCCATTTGCTGTCAGTCCTTCCCATGAGTCTAGGGAGGCGCGTCCGGGTTCTTGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| 3UTR CCA 72 bp | ATTTTACCGAGACTTGTGCAGAGCTATTATCTTAGGTaGAGTAAGGGCAGGGGCAGAGCAGGGTGTGGTGAG | + |
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Preference number: 3 (lower is better) Translates to: ILPRLVQSYYLR*SKGRGRAGCGE Trigger: CTCACCACACCCTGCTCTGCCCCTGCCCTTACTCCACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR TCA 90 bp | ACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCACAGCACAAGAACTCTTCTCTCCACCCGTaGGCACCAGAGCCTGTAAGA | + |
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Preference number: 4 (lower is better) Translates to: THRPPPHSHLPSSAQHKNSSLHP*APEPVR Trigger: TCTTACAGGCTCTGGTGCTCACGGGTGGAGAGAAGA...GTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR GCA 90 bp | ACTGGCTGGGCTGACGTTCTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACAGGTGCTGTACAAAGATaGCCAGAGCCACGTAGACAG | + |
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Preference number: 4 (lower is better) Translates to: TGWADVLSSVTGRSGRLTGAVQR*PEPRRQ Trigger: CTGTCTACGTGGCTCTGGGCATCTTTGTACAGCACC...TGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | CCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCACAGCACAAGAACCAGAGATGCAGACAAGTaGCTTAAAGGAGTCCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: PTALLHIAICLRLHSTRTRDADK*LKGVLQ Trigger: CTGCAGGACTCCTTTAAGCCACTTGTCTGCATCTCT...GGTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | CTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACAGTCCTCCTCCTTTCCCCTCTCTGGGTCGATAACTaGGAGCCTGTGGATCTTATT | + |
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Preference number: 4 (lower is better) Translates to: LSSVTGRSGRLTVLLLSPLWVDN*EPVDLI Trigger: AATAAGATCCACAGGCTCCCAGTTATCGACCCAGAG...AGGGGAAAGGAGGAGGACTGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR TCA 90 bp | CTCCTCCTTTCCCCTTCTCTAGCTCTAGACAGTGGGCGTGGAGCTCCTGAGAGATTGAGGATCCGCTTGTaGGTAAGGATGTACAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LLLSPSLALDSGRGAPERLRIRL*VRMYKV Trigger: CACCTTGTACATCCTTACTCACAAGCGGATCCTCAA...TCTCTCAGGAGCTCCACGCCCACTGTCTAGAGCTAGAGAAGGGGAAAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR TCA 90 bp | ACTGGCTGGGCTGACGTTCTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACACATGCAGGTAGCATTTaGGAACACCCTCAAAGTAGT | + |
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Preference number: 4 (lower is better) Translates to: TGWADVLSSVTGRSGRLTHAGSI*EHPQSS Trigger: ACTACTTTGAGGGTGTTCTCAAATGCTACCTGCATG...TGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR GCA 90 bp | ACTGGCTGGGCTGACGTTCTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACACAATATTGGCATAGGTaGCAATCTGCAGCTCTTGGA | + |
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Preference number: 4 (lower is better) Translates to: TGWADVLSSVTGRSGRLTQYWHR*QSAALG Trigger: TCCAAGAGCTGCAGATTGGCACCTATGCCAATATTG...TGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAGAACGTCAGCCCAGCCAGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | ACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCACAGCACAAGAACCAGCATCAAACAAGCTaGCATTTGGAGAGATGCAGA | + |
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Preference number: 4 (lower is better) Translates to: THRPPPHSHLPSSAQHKNQHQTS*HLERCR Trigger: TCTGCATCTCTCCAAATGCCAGCTTGTTTGATGCTG...GTTCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | GAGATCAGAATCTACCCGAGGAGCACAAAGCCCGTGGCTCACCCAGAAGGGGGCCAAATACCACCAACTTaGAACTTGTGGGAATTAGGT | + |
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Preference number: 4 (lower is better) Translates to: EIRIYPRSTKPVAHPEGGQIPPT*NLWELG Trigger: ACCTAATTCCCACAAGTTCCAAGTTGGTGGTATTTG...GCCCCCTTCTGGGTGAGCCACGGGCTTTGTGCTCCTCGGGTAGATTCTGATCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | GTGAGGTCTAGGGATCTCGTAGAGATCAGAATCTACCCGAGGAGCACAAAGCCCGGACCATGGCAATATTaGCATAGGTGCCAATCTGCA | + |
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Preference number: 4 (lower is better) Translates to: VRSRDLVEIRIYPRSTKPGPWQY*HRCQSA Trigger: TGCAGATTGGCACCTATGCCAATATTGCCATGGTCC...GGGCTTTGTGCTCCTCGGGTAGATTCTGATCTCTACGAGATCCCTAGACCTCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CCA 90 bp | GTGGAGCTCCTGAGAGAAGACTCAGTTCTCCCAGGATTCCATCTGATTCCCAGACCAACTTGGAACTTGTaGGAATTAGGTCATAGCAGC | + |
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Preference number: 4 (lower is better) Translates to: VELLREDSVLPGFHLIPRPTWNL*ELGHSS Trigger: GCTGCTATGACCTAATTCCCACAAGTTCCAAGTTGG...TCTGGGAATCAGATGGAATCCTGGGAGAACTGAGTCTTCTCTCAGGAGCTCCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR TCA 90 bp | ACGAATAAAAATATTTTACCGAGACTTGTGCAGAGCTATTATCTTAGGTGGAGTACCACCACCAGACGGTaGACCTCTGCCTCCACCAGC | + |
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Preference number: 4 (lower is better) Translates to: TNKNILPRLVQSYYLRWSTTTRR*TSASTS Trigger: GCTGGTGGAGGCAGAGGTTCACCGTCTGGTGGTGGT...ACTCCACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAATATTTTTATTCGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR GCA 90 bp | ACGAATAAAAATATTTTACCGAGACTTGTGCAGAGCTATTATCTTAGGTGGAGTGGCTTAAAGGAGTCCTaGAGGTACACCTCTCTCCAC | + |
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Preference number: 4 (lower is better) Translates to: TNKNILPRLVQSYYLRWSGLKES*RYTSLH Trigger: GTGGAGAGAGGTGTACCTGCAGGACTCCTTTAAGCC...ACTCCACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAATATTTTTATTCGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR TCA 90 bp | ACGAATAAAAATATTTTACCGAGACTTGTGCAGAGCTATTATCTTAGGTGGAGTAGCGATGAGACTTCATaGAGGAAGTATACACACTAT | + |
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Preference number: 4 (lower is better) Translates to: TNKNILPRLVQSYYLRWSSDETS*RKYTHY Trigger: ATAGTGTGTATACTTCCTTCATGAAGTCTCATCGCT...ACTCCACCTAAGATAATAGCTCTGCACAAGTCTCGGTAAAATATTTTTATTCGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | CTACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCACAGCACAAGAGCCAATCTGCAGCTCTaGGAGAGACTTAGACATGAA | + |
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Preference number: 5 (lower is better) Translates to: LPTALLHIAICLRLHSTRANLQL*ERLRHE Trigger: TTCATGTCTAAGTCTCTCCAAGAGCTGCAGATTGGC...TCTTGTGCTGTGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | CTCCTCCTTTCCCCTTCTCTAGCTCTAGACAGTGGGCGTGGAGCTCCTGAGAGATCGGTGATAAACAACTaGAGGAACTTGAGGATCCGC | + |
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Preference number: 5 (lower is better) Translates to: LLLSPSLALDSGRGAPERSVINN*RNLRIR Trigger: GCGGATCCTCAAGTTCCTCAAGTTGTTTATCACCGA...TCTCTCAGGAGCTCCACGCCCACTGTCTAGAGCTAGAGAAGGGGAAAGGAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | CTCTCCAGTGTAACAGGACGGTCAGGGAGGCTGACAGTCCTCCTCCTTTCCCCTTCAAATACCACCAACTaGGAACTTGTGGGAATTAGG | + |
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Preference number: 5 (lower is better) Translates to: LSSVTGRSGRLTVLLLSPSNTTN*ELVGIR Trigger: CCTAATTCCCACAAGTTCCAAGTTGGTGGTATTTGA...AGGGGAAAGGAGGAGGACTGTCAGCCTCCCTGACCGTCCTGTTACACTGGAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | GTGAGGTCTAGGGATCTCGTAGAGATCAGAATCTACCCGAGGAGCACAAAGCCCAGGATGTACAAGGTGTaGCCTGACTCTGGGTCGATA | + |
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Preference number: 5 (lower is better) Translates to: VRSRDLVEIRIYPRSTKPRMYKV*PDSGSI Trigger: TATCGACCCAGAGTCAGGCAACACCTTGTACATCCT...GGGCTTTGTGCTCCTCGGGTAGATTCTGATCTCTACGAGATCCCTAGACCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | TCTTGGCTACCTACCCACCGCCCTCCTCCACATAGCCATCTGCCTTCGTCTGCATTTTCGGCTGCCAAATaGATCACATCAAACTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: SWLPTHRPPPHSHLPSSAFSAAK*ITSNLE Trigger: CTCCAAGTTTGATGTGATCAATTTGGCAGCCGAAAA...TGCAGACGAAGGCAGATGGCTATGTGGAGGAGGGCGGTGGGTAGGTAGCCAAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | GACTTGTGCAGAGCTATTATCTTAGGTGGAGTAAGGGCAGGGGCAGAGCAGGGTGATGCTGCAGGGCTTTaGTCACAGACACATCTAGGT | + |
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Preference number: 5 (lower is better) Translates to: DLCRAIILGGVRAGAEQGDAAGL*SQTHLG Trigger: ACCTAGATGTGTCTGTGACAAAAGCCCTGCAGCATC...ACCCTGCTCTGCCCCTGCCCTTACTCCACCTAAGATAATAGCTCTGCACAAGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | ACAGTGGGCGTGGAGCTCCTGAGAGAAGACTCAGTTCTCCCAGGATTCCATCTGGAAGTATACACACTATaGTTTGATTCCGGGGTCTCT | + |
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Preference number: 5 (lower is better) Translates to: TVGVELLREDSVLPGFHLEVYTL*FDSGVS Trigger: AGAGACCCCGGAATCAAACAATAGTGTGTATACTTC...CAGATGGAATCCTGGGAGAACTGAGTCTTCTCTCAGGAGCTCCACGCCCACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS-3UTR CAA 90 bp | GTGGAGCTCCTGAGAGAAGACTCAGTTCTCCCAGGATTCCATCTGATTCCCAGACCACCAACTTGGAACTaGTGGGAATTAGGTCATAGC | + |
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Preference number: 5 (lower is better) Translates to: VELLREDSVLPGFHLIPRPPTWN*WELGHS Trigger: GCTATGACCTAATTCCCACAAGTTCCAAGTTGGTGG...TCTGGGAATCAGATGGAATCCTGGGAGAACTGAGTCTTCTCTCAGGAGCTCCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS TCA 90 bp | CGTCTCTATCTTGTGCTCCTCCAGTTCGTAGATCTGCACCAGGGCTaGCTTATAGTATCGGTGCAAAATGTTGATGAAGTCGGTGATGGT | + |
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Preference number: 5 (lower is better) Translates to: RLYLVLLQFVDLHQG*LIVSVQNVDEVGDG Trigger: ACCATCACCGACTTCATCAACATTTTGCACCGATACTATAAGTCAGCCCTGGTGCAGATCTACGAACTGGAGGAGCACAAGATAGAGACG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000168846.3 ENSMUST00000229297.2 ENSMUST00000230560.2 |
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| CDS TCA 90 bp | TTCATGAAGGAAGTATACACACTATTGTTTGATTCCGGGGTCTCTTaGAAGTGTTCATTCTCTAGAGCTGGCGAGCTCTCTGCAGCAACC | + |
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Preference number: 5 (lower is better) Translates to: FMKEVYTLLFDSGVS*KCSFSRAGELSAAT Trigger: GGTTGCTGCAGAGAGCTCGCCAGCTCTAGAGAATGAACACTTTCAAGAGACCCCGGAATCAAACAATAGTGTGTATACTTCCTTCATGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS CCA 90 bp | ATGTACAAGGTGTTGCCTGACTCTGGGTCGATAACTGGGAGCCTGTaGATCTTATTTCGAATTAATGAAGAGACAGCATCAAACAAGCTG | + |
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Preference number: 5 (lower is better) Translates to: MYKVLPDSGSITGSL*ILFRINEETASNKL Trigger: CAGCTTGTTTGATGCTGTCTCTTCATTAATTCGAAATAAGATCCACAGGCTCCCAGTTATCGACCCAGAGTCAGGCAACACCTTGTACAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168846.3 ENSMUST00000229297.2 ENSMUST00000230560.2 |
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| CDS TCA 72 bp | GAGCCTGTAAGATGTCAGACAGCGAAACGATGCCCTTaGCCACGTCGTGTTCATCCACCACCACCAGACGGT | + |
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Preference number: 6 (lower is better) Translates to: EPVRCQTAKRCP*PRRVHPPPPDG Trigger: ACCGTCTGGTGGTGGTGGATGAACACGACGTGGTCAAGGGCATCGTTTCGCTGTCTGACATCTTACAGGCTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS CAA 72 bp | AGAGCCTGTAAGATGTCAGACAGCGAAACGATGCCCTaGACCACGTCGTGTTCATCCACCACCACCAGACGG | + |
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Preference number: 6 (lower is better) Translates to: RACKMSDSETMP*TTSCSSTTTRR Trigger: CCGTCTGGTGGTGGTGGATGAACACGACGTGGTCAAGGGCATCGTTTCGCTGTCTGACATCTTACAGGCTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS TCA 72 bp | GATCCGCTTGTGAGTAAGGATGTACAAGGTGTTGCCTaGCTCTGGGTCGATAACTGGGAGCCTGTGGATCTT | + |
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Preference number: 6 (lower is better) Translates to: DPLVSKDVQGVA*LWVDNWEPVDL Trigger: AAGATCCACAGGCTCCCAGTTATCGACCCAGAGTCAGGCAACACCTTGTACATCCTTACTCACAAGCGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000168846.3 ENSMUST00000230560.2 |
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| CDS CAA 90 bp | GTGCCAATCTGCAGCTCTTGGAGAGACTTAGACATGAATTCCGGCTaGGGGAACTCGGTGATAAACAACTTGAGGAACTTGAGGATCCGC | + |
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Preference number: 6 (lower is better) Translates to: VPICSSWRDLDMNSG*GNSVINNLRNLRIR Trigger: GCGGATCCTCAAGTTCCTCAAGTTGTTTATCACCGAGTTCCCCAAGCCGGAATTCATGTCTAAGTCTCTCCAAGAGCTGCAGATTGGCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168846.3 ENSMUST00000230560.2 |
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| CDS CAA 90 bp | AGTACGGACCATGGCAATATTGGCATAGGTGCCAATCTGCAGCTCTaGGAGAGACTTAGACATGAATTCCGGCTTGGGGAACTCGGTGAT | + |
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Preference number: 6 (lower is better) Translates to: STDHGNIGIGANLQL*ERLRHEFRLGELGD Trigger: ATCACCGAGTTCCCCAAGCCGGAATTCATGTCTAAGTCTCTCCAAGAGCTGCAGATTGGCACCTATGCCAATATTGCCATGGTCCGTACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000168846.3 ENSMUST00000230560.2 |
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| CDS GCA 72 bp | TTTGGAGAGATGCAGACAAGTGGCTTAAAGGAGTCCTaGAGGTACACCTCTCTCCACGTCTCTATCTTGTGC | + |
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Preference number: 6 (lower is better) Translates to: FGEMQTSGLKES*RYTSLHVSILC Trigger: GCACAAGATAGAGACGTGGAGAGAGGTGTACCTGCAGGACTCCTTTAAGCCACTTGTCTGCATCTCTCCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168846.3 ENSMUST00000229297.2 ENSMUST00000230560.2 |
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| CDS CAA 72 bp | CACCCTCAAAGTAGTGGGACCGATGCTGCAGGGCTTTaGTCACAGACACATCTAGGTTGTTGTAGGTCTTTT | + |
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Preference number: 6 (lower is better) Translates to: HPQSSGTDAAGL*SQTHLGCCRSF Trigger: AAAAGACCTACAACAACCTAGATGTGTCTGTGACAAAAGCCCTGCAGCATCGGTCCCACTACTTTGAGGGTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS CCA 72 bp | GTGTTGCCTGACTCTGGGTCGATAACTGGGAGCCTGTaGATCTTATTTCGAATTAATGAAGAGACAGCATCA | + |
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Preference number: 6 (lower is better) Translates to: VLPDSGSITGSL*ILFRINEETAS Trigger: TGATGCTGTCTCTTCATTAATTCGAAATAAGATCCACAGGCTCCCAGTTATCGACCCAGAGTCAGGCAACAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168846.3 ENSMUST00000229297.2 ENSMUST00000230560.2 |
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| CDS TCA 72 bp | GAAGTATACACACTATTGTTTGATTCCGGGGTCTCTTaGAAGTGTTCATTCTCTAGAGCTGGCGAGCTCTCT | + |
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Preference number: 6 (lower is better) Translates to: EVYTLLFDSGVS*KCSFSRAGELS Trigger: AGAGAGCTCGCCAGCTCTAGAGAATGAACACTTTCAAGAGACCCCGGAATCAAACAATAGTGTGTATACTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000168846.3 |
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| CDS CCA 72 bp | TCTTTACCTGTAGCGAAGTGTCAAATACCACCAACTTaGAACTTGTGGGAATTAGGTCATAGCAGCGATGAG | + |
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Preference number: 6 (lower is better) Translates to: SLPVAKCQIPPT*NLWELGHSSDE Trigger: CTCATCGCTGCTATGACCTAATTCCCACAAGTTCCAAGTTGGTGGTATTTGACACTTCGCTACAGGTAAAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000168846.3 ENSMUST00000229297.2 ENSMUST00000230560.2 |
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