Pregenerated sensors for PRKACB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000005034Ensembl transcript IDs: ENSMUST00000005164.12, ENSMUST00000102515.10, ENSMUST00000106137.8, ENSMUST00000106138.8, ENSMUST00000197616.2, ENSMUST00000199722.5
Found 181 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGACGTGGTGCACACCGTGTTATGGCAGACGATGCTGCGGAGCCGTaGCTGGGGACACAGGTGGTTGCAGAGCGAGCGCACACTGATGAC | + |
|
Preference number: 1 (lower is better) Translates to: GRGAHRVMADDAAEP*LGTQVVAERAHTDD Trigger: GTCATCAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCAGGCACGGCTCCGCAGCATCGTCTGCCATAACACGGTGTGCACCACGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 90 bp | CAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTaGACAACGCCACTCCAACAAGTCTCCCTCAGTCCAGGGCTCTGT | + |
|
Preference number: 1 (lower is better) Translates to: QGVGGPTTCLLLPSV*TTPLQQVSLSPGLC Trigger: ACAGAGCCCTGGACTGAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 90 bp | GCAGAGCGAGCGCACACTGATGACGCAGGAAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCG | + |
|
Preference number: 1 (lower is better) Translates to: AERAHTDDAGKTSRS*WNEGIGTRSNKQVS Trigger: CGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTTTCCTGCGTCATCAGTGTGCGCTCGCTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CCA 90 bp | GAGCGAGCGCACACTGATGACGCAGGAAAGACCTCACGCAGTTGCTaGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCGGCT | + |
|
Preference number: 1 (lower is better) Translates to: ERAHTDDAGKTSRSC*NEGIGTRSNKQVSA Trigger: AGCCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTTTCCTGCGTCATCAGTGTGCGCTCGCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CCA 90 bp | AAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTaGCTGAAGCCCCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGC | + |
|
Preference number: 1 (lower is better) Translates to: KPPKVSFLSHTFLKY*LKPPWKSQGSETLG Trigger: GCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 90 bp | TTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATaGGGACGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTT | + |
|
Preference number: 1 (lower is better) Translates to: FIQMHVCSFPLRAHR*GRRNLPKCHFSVTL Trigger: AAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 90 bp | CTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCTTTaGTTGTTTTCTTACCTGGTACGAACCAAAGCAAACAGACAAGTT | + |
|
Preference number: 1 (lower is better) Translates to: LPSSSLRRGRNKLLL*LFSYLVRTKANRQV Trigger: AACTTGTCTGTTTGCTTTGGTTCGTACCAGGTAAGAAAACAAGCAAAGCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 90 bp | AACAAGACAGCAATACCCATAAGCCACGGCTTCTTTTTGGTAGGCTaGCAGTTTGATATCAAGTGTCTATTTAGCATCAGTGAGGGAGGA | + |
|
Preference number: 1 (lower is better) Translates to: NKTAIPISHGFFLVG*QFDIKCLFSISEGG Trigger: TCCTCCCTCACTGATGCTAAATAGACACTTGATATCAAACTGTCAGCCTACCAAAAAGAAGCCGTGGCTTATGGGTATTGCTGTCTTGTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 90 bp | GAAATCATTATTTGTTACTGTGGGACATTGCCATGCAGAAACACTTaGCAACCAAAACACATGCAGATAGGTGGAGAGAAGGTCTCAGAT | + |
|
Preference number: 1 (lower is better) Translates to: EIIICYCGTLPCRNT*QPKHMQIGGEKVSD Trigger: ATCTGAGACCTTCTCTCCACCTATCTGCATGTGTTTTGGTTGTCAAGTGTTTCTGCATGGCAATGTCCCACAGTAACAAATAATGATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 90 bp | AAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTaGTTTAATGGGCAAAACACCATTTCTTCTGTCTTACGTAATATA | + |
|
Preference number: 1 (lower is better) Translates to: KSPSVQGSVLYNAIS*FNGQNTISSVLRNI Trigger: TATATTACGTAAGACAGAAGAAATGGTGTTTTGCCCATTAAATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 90 bp | GAAGCCATTTATTCACAAAGGAACACTGAACTAAATGTGCAAGAGTaGTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCAATTGGC | + |
|
Preference number: 1 (lower is better) Translates to: EAIYSQRNTELNVQE*LKCPHDGNIVKSIG Trigger: GCCAATTGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGAATAAATGGCTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 90 bp | AGTATTTCAGTTTTTCTTGCACATTTTAAATACAGGTGGACCAACTaGAATCATTATTTGTTACTGTGGGACATTGCCATGCAGAAACAC | + |
|
Preference number: 1 (lower is better) Translates to: SISVFLAHFKYRWTN*NHYLLLWDIAMQKH Trigger: GTGTTTCTGCATGGCAATGTCCCACAGTAACAAATAATGATTTCAGTTGGTCCACCTGTATTTAAAATGTGCAAGAAAAACTGAAATACT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCGATGCTGCGGAGCCGTaGCTGGGGACACAGGTGGTT | + |
|
Preference number: 2 (lower is better) Translates to: AVPACRLLPSEEDAISYCDAAEP*LGTQVV Trigger: AACCACCTGTGTCCCCAGGCACGGCTCCGCAGCATC...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCTCCAGGAGTCCTCACTaGTCTCTAGGCGCTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: LRSPVTSQAGTRQSCGSASRSPH*SLGALT Trigger: AGTCAGAGCGCCTAGAGAGCAGTGAGGACTCCTGGA...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCACGCAGTTGCTGGAATaGAGGGATTGGAACCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLTQLLE*RDWNPL Trigger: GAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGT...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: LRSPVTSQAGTRQSCGSAKTSRS*WNEGIG Trigger: TCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTT...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCTCCAGGAGTCCTCACTaGTCTCTAGGCGCTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLSRSPH*SLGALT Trigger: AGTCAGAGCGCCTAGAGAGCAGTGAGGACTCCTGGA...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | GTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTTATGGCAGACGAGCCTGGGGACACAGGTaGTTGCAGAGCGAGCGCACA | + |
|
Preference number: 2 (lower is better) Translates to: VEKNQTRRTWCTPCYGRRAWGHR*LQSERT Trigger: TGTGCGCTCGCTCTGCAACCACCTGTGTCCCCAGGC...TCGTCTGCCATAACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGACTTTCCTCAAATACTaGCTGAAGCCCCCATGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLTFLKY*LKPPWK Trigger: CTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGT...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 90 bp | CTGATGACGCAGGAAAGACCTCACGCAGTTGCTGGAATGAAGGGATaGGAACCCGCTCCAACAAGCAGGTCTCGGCTCCACCTTCCACCT | + |
|
Preference number: 2 (lower is better) Translates to: LMTQERPHAVAGMKG*EPAPTSRSRLHLPP Trigger: AGGTGGAAGGTGGAGCCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTTTCCTGCGTCATCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCTCACTGCTGCATCAGTaGCCCCTGAAAAGTTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: LRSPVTSQAGTRQSCGSASLLHQ*PLKSYL Trigger: AAGATAACTTTTCAGGGGTCACTGATGCAGCAGTGA...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGCCATGCAGAAACACTTaGCAACCAAAACACATGCAG | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLPCRNT*QPKHMQ Trigger: CTGCATGTGTTTTGGTTGTCAAGTGTTTCTGCATGG...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCTACTATCTCACGGAGTaGAGAGCACTAGAAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: AVPACRLLPSEEDAISYCYYLTE*RALEGP Trigger: TGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTA...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACACATGCAGATAGGTGGAGAGAAGGTCTCAGATAGGATTTTCAATGTCGGGACACGGCAGAGCTaGGGCAGTGCCCGCCTGCCG | + |
|
Preference number: 2 (lower is better) Translates to: PKHMQIGGEKVSDRIFNVGTRQS*GSARLP Trigger: CGGCAGGCGGGCACTGCCGCAGCTCTGCCGTGTCCC...GACATTGAAAATCCTATCTGAGACCTTCTCTCCACCTATCTGCATGTGTTTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGAAGGATATAGGAGGGTaGAGAAAAACCAAACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLKDIGG*RKTKPG Trigger: TCCTGGTTTGGTTTTTCTCCACCCTCCTATATCCTT...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGATACTATCTCACGGAGTaGAGAGCACTAGAAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRYYLTE*RALEGP Trigger: TGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTA...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGTTCACAAAGGAACACTaGACTAAATGTGCAAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLFTKEH*TKCARV Trigger: CACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGAA...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGTACAATGCCATCTCTTaGTTTAATGGGCAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLYNAIS*FNGQNT Trigger: GGTGTTTTGCCCATTAAATCAAGAGATGGCATTGTA...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGACCAAGGGAGACAGCTaGGGCGAGGAGCCATGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLTKGDS*GEEPCP Trigger: GGGGCATGGCTCCTCGCCGCAGCTGTCTCCCTTGGT...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCACTTTCCTCAAATACTaGCTGAAGCCCCCATGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLTFLKY*LKPPWK Trigger: CTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGT...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGTATCAAGGCTTCTGCTaGCTTAGCATTTATCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLYQGFC*LSIYPN Trigger: ATTTGGATAAATGCTAAGTCAGCAGAAGCCTTGATA...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGCATATACTCTGTCTATaGAAGAGAAGGAAGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLHILCL*KRRKRL Trigger: TAACCTCTTCCTTCTCTTTCATAGACAGAGTATATG...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGAAAACTGTATCCGCATaGTCATATACTCTGTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: PTSGSRGSHNVPASALCLKTVSA*SYTLSM Trigger: CATAGACAGAGTATATGATCATGCGGATACAGTTTT...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCCCTCACTTATCTGTCTaGTCACTTACTATCTCACGG | + |
|
Preference number: 2 (lower is better) Translates to: AVPACRLLPSEEDAISYCPHLSV*SLTISR Trigger: CCGTGAGATAGTAAGTGACCAGACAGATAAGTGAGG...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAACCAAGGGAGACAGCTaGGGCGAGGAGCCATGCCCC | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLTKGDS*GEEPCP Trigger: GGGGCATGGCTCCTCGCCGCAGCTGTCTCCCTTGGT...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCATCCAAATGCACGTTTaGTCTTTTCCCTTAAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLIQMHV*SFPLRA Trigger: GGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGAT...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCAAGGATATAGGAGGGTaGAGAAAAACCAAACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLKDIGG*RKTKPG Trigger: TCCTGGTTTGGTTTTTCTCCACCCTCCTATATCCTT...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTGATTACGCAGTTGCTGGAATaGAGGGATTGGAACCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QQVSLSPGLCPIQCHLLITQLLE*RDWNPL Trigger: GAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGT...AATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTTGTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCTTCACAAAGGAACACTaGACTAAATGTGCAAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLFTKEH*TKCARV Trigger: CACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGAA...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGGGTTTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTATCCAGGAGTCCTCACTaGTCTCTAGGCGCTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: KGLVRVCVHMTRTAVNDLSRSPH*SLGALT Trigger: AGTCAGAGCGCCTAGAGAGCAGTGAGGACTCCTGGA...TAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGCAACGTGCCTGCTTCTaGCCTCTGTCTGCACAACGC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLQRACF*PLSAQR Trigger: GCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGTTG...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCACGCAGTTGCTGGAATaGAGGGATTGGAACCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGTQLLE*RDWNPL Trigger: GAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGT...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGACGCAGTTGCTGGAATaGAGGGATTGGAACCCGCTC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLTQLLE*RDWNPL Trigger: GAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGT...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCTATCAAGGCTTCTGCTaGCTTAGCATTTATCCAAAT | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLYQGFC*LSIYPN Trigger: ATTTGGATAAATGCTAAGTCAGCAGAAGCCTTGATA...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCAAAACTGTATCCGCATaGTCATATACTCTGTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLKTVSA*SYTLSM Trigger: CATAGACAGAGTATATGATCATGCGGATACAGTTTT...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTCCAGGAGTCCTCACTaGTCTCTAGGCGCTCTGACT | + |
|
Preference number: 2 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGSRSPH*SLGALT Trigger: AGTCAGAGCGCCTAGAGAGCAGTGAGGACTCCTGGA...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCAACCTCACGCAGTTGCTaGAATGAAGGGATTGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: LVRVCVHMTRTAVNDLPATSRSC*NEGIGT Trigger: GGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGT...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCGCCTGGGGACACAGGTaGTTGCAGAGCGAGCGCACA | + |
|
Preference number: 2 (lower is better) Translates to: LTYLKISQLSMKYKCGSVAWGHR*LQSERT Trigger: TGTGCGCTCGCTCTGCAACCACCTGTGTCCCCAGGC...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGATTATCTTCAAGCCACTaGTCAGCAAAAATATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRLSSSH*SAKILL Trigger: GAGCAATATTTTTGCTGACCAGTGGCTTGAAGATAA...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTACTATCTCACGGAGTaGAGAGCACTAGAAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGYYLTE*RALEGP Trigger: TGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTA...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGACCTCACGCAGTTGCTaGAATGAAGGGATTGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLTSRSC*NEGIGT Trigger: GGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGT...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATGGAAACCTCACGCAGTTGCTaGAATGAAGGGATTGGAACC | + |
|
Preference number: 2 (lower is better) Translates to: SVISQSHFPQILAEAPMETSRSC*NEGIGT Trigger: GGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGT...TTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCACCTCACTTATCTGTCTaGTCACTTACTATCTCACGG | + |
|
Preference number: 2 (lower is better) Translates to: LVRVCVHMTRTAVNDLPAPHLSV*SLTISR Trigger: CCGTGAGATAGTAAGTGACCAGACAGATAAGTGAGG...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 90 bp | CCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCTTTGCTaGTTTTCTTACCTGGTACGAACCAAAGCAAACAGACAAGTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: PSSSLRRGRNKLLLC*FSYLVRTKANRQVP Trigger: GGGAACTTGTCTGTTTGCTTTGGTTCGTACCAGGTAAGAAAACAAGCAAAGCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 90 bp | GGTGGAGAGAAGGTCTCAGATAGGATTTTCAATGTCTTCAAGGGTTaGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGAC | + |
|
Preference number: 2 (lower is better) Translates to: GGEKVSDRIFNVFKG*VRVCVHMTRTAVND Trigger: GTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTTGAAGACATTGAAAATCCTATCTGAGACCTTCTCTCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: IYPNARLLFSLKSPPMRTKTSRS*WNEGIG Trigger: TCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTT...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGACTTTCCTCAAATACTaGCTGAAGCCCCCATGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLTFLKY*LKPPWK Trigger: CTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGT...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTTTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTATATCACAGCTCAGCATaGAATACAAATGTGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KGLVRVCVHMTRTAVNDLYHSSA*NTNVAV Trigger: CACTGCCACATTTGTATTTCATGCTGAGCTGTGATA...TAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CAACAAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTGATTTATCACAGCTCAGCATaGAATACAAATGTGGCAGTG | + |
|
Preference number: 2 (lower is better) Translates to: QQVSLSPGLCPIQCHLLIYHSSA*NTNVAV Trigger: CACTGCCACATTTGTATTTCATGCTGAGCTGTGATA...AATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACACATGCAGATAGGTGGAGAGAAGGTCTCAGATAGGATTTTCAATGTCCAGTGTCTCAAGCTTTaGGTTCTCCTGTCACTAGCC | + |
|
Preference number: 2 (lower is better) Translates to: PKHMQIGGEKVSDRIFNVQCLKL*VLLSLA Trigger: GGCTAGTGACAGGAGAACGCAAAGCTTGAGACACTG...GACATTGAAAATCCTATCTGAGACCTTCTCTCCACCTATCTGCATGTGTTTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGCCTCACTTATCTGTCTaGTCACTTACTATCTCACGG | + |
|
Preference number: 2 (lower is better) Translates to: IYPNARLLFSLKSPPMRTPHLSV*SLTISR Trigger: CCGTGAGATAGTAAGTGACCAGACAGATAAGTGAGG...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | CCAAAACACATGCAGATAGGTGGAGAGAAGGTCTCAGATAGGATTTTCAATGTCAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: PKHMQIGGEKVSDRIFNVKTSRS*WNEGIG Trigger: TCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTT...GACATTGAAAATCCTATCTGAGACCTTCTCTCCACCTATCTGCATGTGTTTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGA | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLKTSRS*WNEGIG Trigger: TCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTT...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR GCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGATCCAAATGCACGTTTaGTCTTTTCCCTTAAGAGCC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLIQMHV*SFPLRA Trigger: GGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGAT...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAACTTTCCTCAAATACTaGCTGAAGCCCCCATGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLTFLKY*LKPPWK Trigger: CTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGT...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTATCACTGCTGCATCAGTaGCCCCTGAAAAGTTATCTT | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLSLLHQ*PLKSYL Trigger: AAGATAACTTTTCAGGGGTCACTGATGCAGCAGTGA...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCTCAAGCTACTATCTCACGGAGTaGAGAGCACTAGAAGGCCCA | + |
|
Preference number: 2 (lower is better) Translates to: YLKISQLSMKYKCGSVSSYYLTE*RALEGP Trigger: TGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTA...GCTTGAGACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGTTCACAAAGGAACACTaGACTAAATGTGCAAGAGTG | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLFTKEH*TKCARV Trigger: CACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGAA...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGGGTTTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTATTTAAGGTAGGTCACTaGTACAGAGATAAAATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: KGLVRVCVHMTRTAVNDLFKVGH*YRDKMR Trigger: CCTCATTTTATCTCTGTATCAGTGACCTACCTTAAA...TAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGTACAATGCCATCTCTTaGTTTAATGGGCAAAACACC | + |
|
Preference number: 2 (lower is better) Translates to: YLASVREEGRNGTDKAFLYNAIS*FNGQNT Trigger: GGTGTTTTGCCCATTAAATCAAGAGATGGCATTGTA...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGGGTTTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTATTATCTTCAAGCCACTaGTCAGCAAAAATATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: KGLVRVCVHMTRTAVNDLLSSSH*SAKILL Trigger: GAGCAATATTTTTGCTGACCAGTGGCTTGAAGATAA...TAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGTGCATCAGTGACCCCTaGAAAGTTATCTTTACTTAT | + |
|
Preference number: 2 (lower is better) Translates to: IYPNARLLFSLKSPPMRTCISDP*KVIFTY Trigger: ATAAGTAAAGATAACTTTTCAGGGGTCACTGATGCA...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | AGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATGGAATTATCTTCAAGCCACTaGTCAGCAAAAATATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: SVISQSHFPQILAEAPMELSSSH*SAKILL Trigger: GAGCAATATTTTTGCTGACCAGTGGCTTGAAGATAA...TTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCCCTCACTTATCTGTCTaGTCACTTACTATCTCACGG | + |
|
Preference number: 2 (lower is better) Translates to: LTYLKISQLSMKYKCGSVPHLSV*SLTISR Trigger: CCGTGAGATAGTAAGTGACCAGACAGATAAGTGAGG...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTACATGAAATACAAATGTaGCAGTGTCTCAAGCTTTGC | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLHEIQM*QCLKLC Trigger: GCAAAGCTTGAGACACTGCCACATTTGTATTTCATG...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAAAAACTGTATCCGCATaGTCATATACTCTGTCTATG | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLKTVSA*SYTLSM Trigger: CATAGACAGAGTATATGATCATGCGGATACAGTTTT...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTATTTAAGGTAGGTCACTaGTACAGAGATAAAATGAGG | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLFKVGH*YRDKMR Trigger: CCTCATTTTATCTCTGTATCAGTGACCTACCTTAAA...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCTCAAGCAAGGATATAGGAGGGTaGAGAAAAACCAAACCAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YLKISQLSMKYKCGSVSSKDIGG*RKTKPG Trigger: TCCTGGTTTGGTTTTTCTCCACCCTCCTATATCCTT...GCTTGAGACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTATTATCTTCAAGCCACTaGTCAGCAAAAATATTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLLSSSH*SAKILL Trigger: GAGCAATATTTTTGCTGACCAGTGGCTTGAAGATAA...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 90 bp | GCCATTTATTCACAAAGGAACACTGAACTAAATGTGCAAGAGTGCTaGAAATGTCCTCACGATGGCAACATTGTTAAGTCAATTGGCAAA | + |
|
Preference number: 2 (lower is better) Translates to: AIYSQRNTELNVQEC*KCPHDGNIVKSIGK Trigger: TTTGCCAATTGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGAATAAATGGC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCACATATACTCTGTCTATaGAAGAGAAGGAAGAGGTTA | + |
|
Preference number: 2 (lower is better) Translates to: LNVQECLKCPHDGNIVKSHILCL*KRRKRL Trigger: TAACCTCTTCCTTCTCTTTCATAGACAGAGTATATG...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | AGGGACACGGCAGAGCTGCGGCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGTGGGGACACAGGTGGTaGCAGAGCGAGCGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: RDTAELRQCPPAVFFPQKWGHRW*QSERTL Trigger: CAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCA...CTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGCCGCAGCTCTGCCGTGTCCCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | GCACACCGTGTTATGGCAGACGATGCTGCGGAGCCGTaGCTGGGGACACAGGTGGTTGCAGAGCGAGCGCAC | + |
|
Preference number: 3 (lower is better) Translates to: AHRVMADDAAEP*LGTQVVAERAH Trigger: GTGCGCTCGCTCTGCAACCACCTGTGTCCCCAGGCACGGCTCCGCAGCATCGTCTGCCATAACACGGTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | TCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTaGGGCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SPVTSQAGTRQS*GSARLPSSSLR Trigger: TCTGAGGGAAGAAGACGGCAGGCGGGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | CCTGACCTACCTCAGGGAGTCGGGGGTCCCACAACGTaGCTGCTTCTGCCCTCTGTCTGCACAACGCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: PDLPQGVGGPTT*LLLPSVCTTPL Trigger: GAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGGTCAGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CCA 72 bp | ACCGTGTTATGGCAGACGATGCTGCGGAGCCGTGCCTaGGGACACAGGTGGTTGCAGAGCGAGCGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: TVLWQTMLRSRA*GHRWLQSERTL Trigger: CAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCAGGCACGGCTCCGCAGCATCGTCTGCCATAACACGGT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCTGGGGACACAGGTGGTaGCAGAGCGAGCGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: AVPACRLLPSEEDAISYCWGHRW*QSERTL Trigger: CAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCA...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | GGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTaGACAACGCCACTCCAACAAGTCTCCCTCAGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: GGPTTCLLLPSV*TTPLQQVSLSP Trigger: TGGACTGAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGTCAGAAAGAGACCCCTaGACCCAGCTGATGGTTTGC | + |
|
Preference number: 3 (lower is better) Translates to: PTSGSRGSHNVPASALCLSERDP*TQLMVC Trigger: GCAAACCATCAGCTGGGTCAAGGGGTCTCTTTCTGA...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTTATGGCAGACGATGGGGACACAGGTGGTaGCAGAGCGAGCGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: VEKNQTRRTWCTPCYGRRWGHRW*QSERTL Trigger: CAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCA...TCGTCTGCCATAACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | AGGAGGGTGGAGAAAAACCAAACCAGGAGGACGTGGTaGACACCGTGTTATGGCAGACGATGCTGCGGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: RRVEKNQTRRTW*TPCYGRRCCGA Trigger: GGCTCCGCAGCATCGTCTGCCATAACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCACCCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | GCGCACACTGATGACGCAGGAAAGACCTCACGCAGTTaGTGGAATGAAGGGATTGGAACCCGCTCCAACAAG | + |
|
Preference number: 3 (lower is better) Translates to: AHTDDAGKTSRS*WNEGIGTRSNK Trigger: CTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTTTCCTGCGTCATCAGTGTGCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CCA 72 bp | CACACTGATGACGCAGGAAAGACCTCACGCAGTTGCTaGAATGAAGGGATTGGAACCCGCTCCAACAAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: HTDDAGKTSRSC*NEGIGTRSNKQ Trigger: CTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTGAGGTCTTTCCTGCGTCATCAGTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGGGGACACAGGTGGTaGCAGAGCGAGCGCACACTG | + |
|
Preference number: 3 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGWGHRW*QSERTL Trigger: CAGTGTGCGCTCGCTCTGCAACCACCTGTGTCCCCA...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCGCCATGCAGAAACACTaGACAACCAAAACACATGCA | + |
|
Preference number: 3 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLAMQKH*TTKTHA Trigger: TGCATGTGTTTTGGTTGTCAAGTGTTTCTGCATGGC...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | CAGCATGAAATACAAATGTGGCAGTGTCTCAAGCTTTaGGTTCTCCTGTCACTAGCCAGGCAGGGACACGGC | + |
|
Preference number: 3 (lower is better) Translates to: QHEIQMWQCLKL*VLLSLARQGHG Trigger: GCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAAAGCTTGAGACACTGCCACATTTGTATTTCATGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | TCACTTATCTGTCTGGTCACTTACTATCTCACGGAGTaGAGAGCACTAGAAGGCCCAGGGGAACGTAGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: SLICLVTYYLTE*RALEGPGERSL Trigger: GAGGCTACGTTCCCCTGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTAAGTGACCAGACAGATAAGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CCA 72 bp | AGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATaGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHTFLKYWLKPP*KSQGSETLGLS Trigger: AGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | TGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTaGAGCCCCCATGGAAGAGCCAAGGCTCAGAAACCT | + |
|
Preference number: 3 (lower is better) Translates to: CHFSVTLSSNTG*SPHGRAKAQKP Trigger: AGGTTTCTGAGCCTTGGCTCTTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | ATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATaGGGACGGAGAAACCTCCCAAAGTGTCATTTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: MHVCSFPLRAHR*GRRNLPKCHFS Trigger: TGAGAAATGACACTTTGGGAGGTTTCTCCGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCATATCCAAATGCACGTTaGCTCTTTTCCCTTAAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: LVRVCVHMTRTAVNDLPAYPNAR*LFSLKS Trigger: GCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATA...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | CTGCTCTCTAGGCGCTCTGACTCACTGCTGCATCAGTaGCCCCTGAAAAGTTATCTTTACTTATGCAAATTC | + |
|
Preference number: 3 (lower is better) Translates to: LLSRRSDSLLHQ*PLKSYLYLCKF Trigger: GAATTTGCATAAGTAAAGATAACTTTTCAGGGGTCACTGATGCAGCAGTGAGTCAGAGCGCCTAGAGAGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR GCA 72 bp | CGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTaGTTTGCTTGTTTTCTTACCTGGTACGAACCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: RLLPSEEDAISY*FACFLTWYEPK Trigger: CTTTGGTTCGTACCAGGTAAGAAAACAAGCAAAGCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR-3UTR CAA 90 bp | CAACAAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTGATTTCCAATTTAGTGTACTaGGTTAGTCAGAAAGAGACC | + |
|
Preference number: 3 (lower is better) Translates to: QQVSLSPGLCPIQCHLLISNLVY*VSQKET Trigger: GGTCTCTTTCTGACTAACCAAGTACACTAAATTGGA...AATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTTGTTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | GCAATACCCATAAGCCACGGCTTCTTTTTGGTAGGCTaGCAGTTTGATATCAAGTGTCTATTTAGCATCAGT | + |
|
Preference number: 3 (lower is better) Translates to: AIPISHGFFLVG*QFDIKCLFSIS Trigger: ACTGATGCTAAATAGACACTTGATATCAAACTGTCAGCCTACCAAAAAGAAGCCGTGGCTTATGGGTATTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR TCA 72 bp | GTTTTTCTTGCACATTTTAAATACAGGTGGACCAACTaGAATCATTATTTGTTACTGTGGGACATTGCCATG | + |
|
Preference number: 3 (lower is better) Translates to: VFLAHFKYRWTN*NHYLLLWDIAM Trigger: CATGGCAATGTCCCACAGTAACAAATAATGATTTCAGTTGGTCCACCTGTATTTAAAATGTGCAAGAAAAAC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR TCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGAATTCTTCTCAGATGTaGGAACATCTCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PTSGSRGSHNVPASALCLNSSQM*EHLSPR Trigger: CCTGGGGGAGAGATGTTCTCACATCTGAGAAGAATT...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | AGGGACACGGCAGAGCTGCGGCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGTGTCTAAGATCTTCATaGCGTAGTACTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RDTAELRQCPPAVFFPQKCLRSS*RSTAQW Trigger: CCACTGAGCAGTACTACGCCATGAAGATCTTAGACA...CTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGCCGCAGCTCTGCCGTGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCGGGAACTCCACGGCCTaGAGGATTCTCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLGNSTA*RILFSF Trigger: GAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCC...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGACCAGGTACTCTGGGGTaGCACACAATGTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRPGTLG*HTMSMS Trigger: GGACATGGACATTGTGTGGCACCCCAGAGTACCTGG...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCTGTCTAAGATCTTCATaGCGTAGTACTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVTSQAGTRQSCGSACLRSS*RSTAQW Trigger: CCACTGAGCAGTACTACGCCATGAAGATCTTAGACA...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | GCAGGTCTCGGCTCCACCTTCCACCTCCACAGCGTGCAAGGGCTGAGTGTGAGCTGTCTAAGATCTTCATaGCGTAGTACTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSTFHLHSVQGLSVSCLRSS*RSTAQW Trigger: CCACTGAGCAGTACTACGCCATGAAGATCTTAGACA...GCTCACACTCAGCCCTTGCACGCTGTGGAGGTGGAAGGTGGAGCCGAGACCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCAGAGCCTCTGAACTTTaGTATGAATGGAGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVTSQAGTRQSCGSARASEL*YEWSLN Trigger: GTTGAGGCTCCATTCATACCAAAGTTCAGAGGCTCT...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGATTTGTCAGATCCACCTaGAGCAGGTTCCGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRFVRST*SRFRRR Trigger: CCTTCTGCGGAACCTGCTGCAGGTGGATCTGACAAA...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | CCTACCTCAGGGAGTCGGGGGTCCCACAACGTGCCTGCTTCTGCCCTCTGTCTGGAACTTTGGTATGAATaGAGCCTCAACCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTSGSRGSHNVPASALCLELWYE*SLNLSL Trigger: CAGAGAAAGGTTGAGGCTCCATTCATACCAAAGTTC...CAGACAGAGGGCAGAAGCAGGCACGTTGTGGGACCCCCGACTCCCTGAGGTAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACACGGCAGAGCTGCGGCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGCTTAACAACCTTCTaGTTGTCTAAGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: RDTAELRQCPPAVFFPQKSLTTF*LSKIFM Trigger: CATGAAGATCTTAGACAAGCAGAAGGTTGTTAAGCT...CTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGCCGCAGCTCTGCCGTGTCCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | GGATATAGGAGGGTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTCTTCGCTGCCTTTCTTaGCGATCGCAGTGTTCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GYRRVEKNQTRRTWCTPCLRCLS*RSQCSP Trigger: TGGGGAACACTGCGATCGCCAAGAAAGGCAGCGAAG...ACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCACCCTCCTATATCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000102515.10 |
||
| CDS-3UTR GCA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCAGCTTAACAACCTTCTaGTTGTCTAAGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: LRSPVTSQAGTRQSCGSASLTTF*LSKIFM Trigger: CATGAAGATCTTAGACAAGCAGAAGGTTGTTAAGCT...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | GCAGGTCTCGGCTCCACCTTCCACCTCCACAGCGTGCAAGGGCTGAGTGTGAGCTTCTCATTCAGAGTGTaGTCTATTTGCTTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLGSTFHLHSVQGLSVSFSFRV*SICFSL Trigger: TAAGCTGAAGCAAATAGAGCACACTCTGAATGAGAA...GCTCACACTCAGCCCTTGCACGCTGTGGAGGTGGAAGGTGGAGCCGAGACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | GTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTTATGGCAGACGATTTGTCAGATCCACCTaGAGCAGGTTCCGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: VEKNQTRRTWCTPCYGRRFVRST*SRFRRR Trigger: CCTTCTGCGGAACCTGCTGCAGGTGGATCTGACAAA...TCGTCTGCCATAACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | GGATATAGGAGGGTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTTTTGTCAGATCCACCTaGAGCAGGTTCCGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYRRVEKNQTRRTWCTPCFVRST*SRFRRR Trigger: CCTTCTGCGGAACCTGCTGCAGGTGGATCTGACAAA...ACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCACCCTCCTATATCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCACGCTCTCCACTTCGCTaGCTTTCTTGGCGATCGCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVRVCVHMTRTAVNDLPARSPLR*LSWRSQ Trigger: CTGCGATCGCCAAGAAAGGCAGCGAAGTGGAGAGCG...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000102515.10 |
||
| CDS-3UTR GCA 90 bp | TATCTGTCTGGTCACTTACTATCTCACGGAGTGAAGAGCACTAGAAGGCCCAGGGTCATCTTCCAGAGCTaGCCTGTGCTCTTGTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: YLSGHLLSHGVKSTRRPRVIFQS*PVLLCG Trigger: ACCGCACAAGAGCACAGGGCAGCTCTGGAAGATGAC...CCTGGGCCTTCTAGTGCTCTTCACTCCGTGAGATAGTAAGTGACCAGACAGATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS-3UTR CCA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCGAACTTTGGTATGAATaGAGCCTCAACCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AVPACRLLPSEEDAISYCELWYE*SLNLSL Trigger: CAGAGAAAGGTTGAGGCTCCATTCATACCAAAGTTC...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR TCA 90 bp | GGATATAGGAGGGTGGAGAAAAACCAAACCAGGAGGACGTGGTGCACACCGTGTAATTCTTCTCAGATGTaGGAACATCTCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GYRRVEKNQTRRTWCTPCNSSQM*EHLSPR Trigger: CCTGGGGGAGAGATGTTCTCACATCTGAGAAGAATT...ACACGGTGTGCACCACGTCCTCCTGGTTTGGTTTTTCTCCACCCTCCTATATCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CACGCAGTTGCTGGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCGGTGCTCAGTGGCTTTATaGTTCACCAACATGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: HAVAGMKGLEPAPTSRSRCSVAL*FTNMTL Trigger: AAGAGTCATGTTGGTGAAGCATAAAGCCACTGAGCA...CCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCAGGGAACTCCACGGCCTaGAGGATTCTCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LVRVCVHMTRTAVNDLPAGNSTA*RILFSF Trigger: GAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCC...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGAAGAGTGTGCTCTATTTaGTTCAGCTTAACAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRRVCSI*FSLTTF Trigger: GAAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCT...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCTTCTCATTCAGAGTGTaGTCTATTTGCTTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLFSFRV*SICFSL Trigger: TAAGCTGAAGCAAATAGAGCACACTCTGAATGAGAA...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCCCAGGTACTCTGGGGTaGCACACAATGTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGPGTLG*HTMSMS Trigger: GGACATGGACATTGTGTGGCACCCCAGAGTACCTGG...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR TCA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCAAATTCTTCTCAGATGTaGGAACATCTCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: LVRVCVHMTRTAVNDLPANSSQM*EHLSPR Trigger: CCTGGGGGAGAGATGTTCTCACATCTGAGAAGAATT...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CCCATGGAAGAGCCAAGGCTCAGAAACCTTAGGCCTCTCTCCAGCCCACAGAGAAGCTTAACAACCTTCTaGTTGTCTAAGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: PMEEPRLRNLRPLSSPQRSLTTF*LSKIFM Trigger: CATGAAGATCTTAGACAAGCAGAAGGTTGTTAAGCT...TCTCTGTGGGCTGGAGAGAGGCCTAAGGTTTCTGAGCCTTGGCTCTTCCATGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGGGGAACTCCACGGCCTaGAGGATTCTCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: YLASVREEGRNGTDKAFLGNSTA*RILFSF Trigger: GAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCC...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGTTTGTCAGATCCACCTaGAGCAGGTTCCGCAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IYPNARLLFSLKSPPMRTFVRST*SRFRRR Trigger: CCTTCTGCGGAACCTGCTGCAGGTGGATCTGACAAA...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR TCA 90 bp | CGGAGAAACCTCCCAAAGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCAATTCTTCTCAGATGTaGGAACATCTCTCCCCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRNLPKCHFSVTLSSNTGNSSQM*EHLSPR Trigger: CCTGGGGGAGAGATGTTCTCACATCTGAGAAGAATT...GCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACTTTGGGAGGTTTCTCCG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR TCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCATCCATGTCCTGCCCTTaGCTCTTTTGGCGAACCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LNVQECLKCPHDGNIVKSSMSCP*LFWRTR Trigger: TCGGGTTCGCCAAAAGAGTCAAGGGCAGGACATGGA...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCACCAGGTACTCTGGGGTaGCACACAATGTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LNVQECLKCPHDGNIVKSPGTLG*HTMSMS Trigger: GGACATGGACATTGTGTGGCACCCCAGAGTACCTGG...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCGGGAACTCCACGGCCTaGAGGATTCTCTTCTCATTC | + |
|
Preference number: 4 (lower is better) Translates to: LTYLKISQLSMKYKCGSVGNSTA*RILFSF Trigger: GAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCC...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | AGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATGGAATGTCTAAGATCTTCATaGCGTAGTACTGCTCAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVISQSHFPQILAEAPMECLRSS*RSTAQW Trigger: CCACTGAGCAGTACTACGCCATGAAGATCTTAGACA...TTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCACTGGTCAGCAAAGAATaGAGGGTAGCCAGCAGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LNVQECLKCPHDGNIVKSLVSKE*RVASSH Trigger: ATGGCTGCTGGCTACCCTCCATTCTTTGCTGACCAG...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGAGAGCCTCTGAACTTTaGTATGAATGGAGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: IYPNARLLFSLKSPPMRTRASEL*YEWSLN Trigger: GTTGAGGCTCCATTCATACCAAAGTTCAGAGGCTCT...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 72 bp | TGTTGCTATCAAAGCTTACTTCACAGCGGGATACCCTaGAGAATATTAGCTGAGGAGGGAATCCTGACCTAC | + |
|
Preference number: 4 (lower is better) Translates to: CCYQSLLHSGIP*RILAEEGILTY Trigger: GTAGGTCAGGATTCCCTCCTCAGCTAATATTCTCAAGGGTATCCCGCTGTGAAGTAAGCTTTGATAGCAACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGTGCTCAGTGGCTTTATaGTTCACCAACATGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: YLASVREEGRNGTDKAFLCSVAL*FTNMTL Trigger: AAGAGTCATGTTGGTGAAGCATAAAGCCACTGAGCA...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TTTCAGCATTTCCTAGCTATAGTAGCGCATAGGAAATTGCACTCTAAACAAAGACCAGGTACTCTGGGGTaGCACACAATGTCCATGTCC | + |
|
Preference number: 4 (lower is better) Translates to: FQHFLAIVAHRKLHSKQRPGTLG*HTMSMS Trigger: GGACATGGACATTGTGTGGCACCCCAGAGTACCTGG...TCTTTGTTTAGAGTGCAATTTCCTATGCGCTACTATAGCTAGGAAATGCTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000102515.10 |
||
| 3UTR CAA 72 bp | AAGGTCTCAGATAGGATTTTCAATGTCTTCAAGGGTTaGGTGAGGGTGTGTGTGCATATGACTAGGACTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KVSDRIFNVFKG*VRVCVHMTRTA Trigger: AGCAGTCCTAGTCATATGCACACACACCCTCACCAAACCCTTGAAGACATTGAAAATCCTATCTGAGACCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATGGAAAGAGTGTGCTCTATTTaGTTCAGCTTAACAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: SVISQSHFPQILAEAPMERVCSI*FSLTTF Trigger: GAAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCT...TTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGAGAGTGTGCTCTATTTaGTTCAGCTTAACAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IYPNARLLFSLKSPPMRTRVCSI*FSLTTF Trigger: GAAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCT...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CAACAAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTGATTTTCTCATTCAGAGTGTaGTCTATTTGCTTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: QQVSLSPGLCPIQCHLLIFSFRV*SICFSL Trigger: TAAGCTGAAGCAAATAGAGCACACTCTGAATGAGAA...AATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTTGTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAAGAGCCTCTGAACTTTaGTATGAATGGAGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLRASEL*YEWSLN Trigger: GTTGAGGCTCCATTCATACCAAAGTTCAGAGGCTCT...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTATGCTCAGTGGCTTTATaGTTCACCAACATGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLCSVAL*FTNMTL Trigger: AAGAGTCATGTTGGTGAAGCATAAAGCCACTGAGCA...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | AGTGTCATTTCTCAGTCACACTTTCCTCAAATACTGGCTGAAGCCCCCATGGAAAGCTTAACAACCTTCTaGTTGTCTAAGATCTTCATG | + |
|
Preference number: 4 (lower is better) Translates to: SVISQSHFPQILAEAPMESLTTF*LSKIFM Trigger: CATGAAGATCTTAGACAAGCAGAAGGTTGTTAAGCT...TTCCATGGGGGCTTCAGCCAGTATTTGAGGAAAGTGTGACTGAGAAATGACACT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTAGAACTTTGGTATGAATaGAGCCTCAACCTTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLELWYE*SLNLSL Trigger: CAGAGAAAGGTTGAGGCTCCATTCATACCAAAGTTC...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CCA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCAGAGCCTCTGAACTTTaGTATGAATGGAGCCTCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LTYLKISQLSMKYKCGSVRASEL*YEWSLN Trigger: GTTGAGGCTCCATTCATACCAAAGTTCAGAGGCTCT...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 72 bp | TATTTGTTACTGTGGGACATTGCCATGCAGAAACACTaGACAACCAAAACACATGCAGATAGGTGGAGAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YLLLWDIAMQKH*TTKTHADRWRE Trigger: TTCTCTCCACCTATCTGCATGTGTTTTGGTTGTCAAGTGTTTCTGCATGGCAATGTCCCACAGTAACAAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCATGCTCAGTGGCTTTATaGTTCACCAACATGACTCTT | + |
|
Preference number: 4 (lower is better) Translates to: LNVQECLKCPHDGNIVKSCSVAL*FTNMTL Trigger: AAGAGTCATGTTGGTGAAGCATAAAGCCACTGAGCA...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCAAGAGTGTGCTCTATTTaGTTCAGCTTAACAACCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LNVQECLKCPHDGNIVKSRVCSI*FSLTTF Trigger: GAAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCT...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR GCA 90 bp | TGTACTTCCAACAGAGACAATAAAATGGAATGGCTGAGAAGCCCCAGAAACCTATTCTCATTCAGAGTGTaGTCTATTTGCTTCAGCTTA | + |
|
Preference number: 4 (lower is better) Translates to: CTSNRDNKMEWLRSPRNLFSFRV*SICFSL Trigger: TAAGCTGAAGCAAATAGAGCACACTCTGAATGAGAA...TAGGTTTCTGGGGCTTCTCAGCCATTCCATTTTATTGTCTCTGTTGGAAGTACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| 3UTR CAA 72 bp | TCACAAAGGAACACTGAACTAAATGTGCAAGAGTGCTaGAAATGTCCTCACGATGGCAACATTGTTAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SQRNTELNVQEC*KCPHDGNIVKS Trigger: TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAGTTCAGTGTTCCTTTGTGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS GCA 90 bp | AGAGGCCCGAAGGCCGTCATCTTCCAGAGCTGCCCTGTGCTCTTGTaGGGTGCCTCTGGAGTGCCTGTGAAACAGGCGGCTAGCGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: RGPKAVIFQSCPVLL*GASGVPVKQAASEP Trigger: GGGTTCGCTAGCCGCCTGTTTCACAGGCACTCCAGAGGCACCGCACAAGAGCACAGGGCAGCTCTGGAAGATGACGGCCTTCGGGCCTCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS-3UTR CAA 90 bp | TTGCGTTCTCCTGTCACTAGCCAGGCAGGGACACGGCAGAGCTGCGGCAGTGCCTTCCGCAGAAGGTCCTaGAGATCGGAGCTGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LRSPVTSQAGTRQSCGSAFRRRS*RSELKC Trigger: ACACTTCAGCTCCGATCTCAAGGACCTTCTGCGGAA...GGCACTGCCGCAGCTCTGCCGTGTCCCTGCCTGGCTAGTGACAGGAGAACGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | ACGTGCCTGCTTCTGCCCTCTGTCTGCACAACGCCACTCCAACAAGTCTCCCTCGTCCATGTCCTGCCCTaGACTCTTTTGGCGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: TCLLLPSVCTTPLQQVSLVHVLP*TLLANP Trigger: CGGGTTCGCCAAAAGAGTCAAGGGCAGGACATGGAC...GAGGGAGACTTGTTGGAGTGGCGTTGTGCAGACAGAGGGCAGAAGCAGGCACGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CACGCAGTTGCTGGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCGGGTCCATGTCCTGCCCTaGACTCTTTTGGCGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: HAVAGMKGLEPAPTSRSRVHVLP*TLLANP Trigger: CGGGTTCGCCAAAAGAGTCAAGGGCAGGACATGGAC...CCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | GCAGGTCTCGGCTCCACCTTCCACCTCCACAGCGTGCAAGGGCTGAGTGTGAGCTCTCATAGATCTGAATaGGCTGGTCAGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: AGLGSTFHLHSVQGLSVSSHRSE*AGQQRM Trigger: CATTCTTTGCTGACCAGCCAATTCAGATCTATGAGA...GCTCACACTCAGCCCTTGCACGCTGTGGAGGTGGAAGGTGGAGCCGAGACCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | GCAGTGCCCGCCTGCCGTCTTCTTCCCTCAGAAGAGGACGCAATAAGCTACTGCCAGAGTGTGCTCTATTaGCTTCAGCTTAACAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: AVPACRLLPSEEDAISYCQSVLY*LQLNNL Trigger: AAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCTG...GCAGTAGCTTATTGCGTCCTCTTCTGAGGGAAGAAGACGGCAGGCGGGCACTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CACGCAGTTGCTGGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCGGCTAGAAACTCTTTCATaGATTTGTCCCATGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HAVAGMKGLEPAPTSRSRLETLS*ICPMRQ Trigger: CTGCCTCATGGGACAAATCAATGAAAGAGTTTCTAG...CCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS-3UTR CAA 90 bp | CACGCAGTTGCTGGAATGAAGGGATTGGAACCCGCTCCAACAAGCAGGTCTCGGTCTCATAGATCTGAATaGGCTGGTCAGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: HAVAGMKGLEPAPTSRSRSHRSE*AGQQRM Trigger: CATTCTTTGCTGACCAGCCAATTCAGATCTATGAGA...CCGAGACCTGCTTGTTGGAGCGGGTTCCAATCCCTTCATTCCAGCAACTGCGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS GCA 90 bp | TTAAAAGAGTACTCCAGCCGCACAAGGAACGGGAACTCCACGGCCTaGAGGATTCTCTTCTCATTCAGAGTGTGCTCTATTTGCTTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LKEYSSRTRNGNSTA*RILFSFRVCSICFS Trigger: GCTGAAGCAAATAGAGCACACTCTGAATGAGAAGAGAATCCTGCAGGCCGTGGAGTTCCCGTTCCTTGTGCGGCTGGAGTACTCTTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 ENSMUST00000197616.2 ENSMUST00000199722.5 |
||
| CDS CCA 90 bp | ACCCTCCCATCATCTTCCATACCCCAAAAGCCCATCTTGTTCCTTTaGTCCCTCATCTCCTCTGTGCTTTCATGCCACACTTGTTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: TLPSSSIPQKPILFL*SLISSVLSCHTCSS Trigger: GGAAGAACAAGTGTGGCATGAAAGCACAGAGGAGATGAGGGACCAAAGGAACAAGATGGGCTTTTGGGGTATGGAAGATGATGGGAGGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197616.2 |
||
| CDS-3UTR CAA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCAAGCTGCCCTGTGCTCTaGTGCGGTGCCTCTGGAGTG | + |
|
Preference number: 5 (lower is better) Translates to: LNVQECLKCPHDGNIVKSSCPVL*CGASGV Trigger: CACTCCAGAGGCACCGCACAAGAGCACAGGGCAGCT...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS-3UTR CAA 90 bp | ATTTATCCAAATGCACGTTTGCTCTTTTCCCTTAAGAGCCCACCGATGAGGACGTTCCGCAGAAGGTCCTaGAGATCGGAGCTGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: IYPNARLLFSLKSPPMRTFRRRS*RSELKC Trigger: ACACTTCAGCTCCGATCTCAAGGACCTTCTGCGGAA...CGTCCTCATCGGTGGGCTCTTAAGGGAAAAGAGCAAACGTGCATTTGGATAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCGTCCATGTCCTGCCCTaGACTCTTTTGGCGAACCCG | + |
|
Preference number: 5 (lower is better) Translates to: LTYLKISQLSMKYKCGSVVHVLP*TLLANP Trigger: CGGGTTCGCCAAAAGAGTCAAGGGCAGGACATGGAC...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS CCA 90 bp | CATTACTCGGGGGAGGGTTCTCCCATTTCCTCAGAAAGTCTTCTTTaGCTTTGGCTAGAAACTCTTTCATTGATTTGTCCCATGAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: HYSGEGSPISSESLL*LWLETLSLICPMRQ Trigger: CTGCCTCATGGGACAAATCAATGAAAGAGTTTCTAGCCAAAGCCAAAGAAGACTTTCTGAGGAAATGGGAGAACCCTCCCCCGAGTAATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS-3UTR CAA 90 bp | TTGGTGAGGGTGTGTGTGCATATGACTAGGACTGCTGTCAATGACCTACCTGCATCTCATAGATCTGAATaGGCTGGTCAGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: LVRVCVHMTRTAVNDLPASHRSE*AGQQRM Trigger: CATTCTTTGCTGACCAGCCAATTCAGATCTATGAGA...TGCAGGTAGGTCATTGACAGCAGTCCTAGTCATATGCACACACACCCTCACCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CAACAAGTCTCCCTCAGTCCAGGGCTCTGTCCTATACAATGCCATCTCTTGATTCAGAGTGTGCTCTATTaGCTTCAGCTTAACAACCTT | + |
|
Preference number: 5 (lower is better) Translates to: QQVSLSPGLCPIQCHLLIQSVLY*LQLNNL Trigger: AAGGTTGTTAAGCTGAAGCAAATAGAGCACACTCTG...AATCAAGAGATGGCATTGTATAGGACAGAGCCCTGGACTGAGGGAGACTTGTTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CTAAATGTGCAAGAGTGCTTGAAATGTCCTCACGATGGCAACATTGTTAAGTCATTCCGCAGAAGGTCCTaGAGATCGGAGCTGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LNVQECLKCPHDGNIVKSFRRRS*RSELKC Trigger: ACACTTCAGCTCCGATCTCAAGGACCTTCTGCGGAA...TGACTTAACAATGTTGCCATCGTGAGGACATTTCAAGCACTCTTGCACATTTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | TATTTAGCATCAGTGAGGGAGGAAGGAAGGAATGGAACAGACAAGGCCTTTCTGTCTCATAGATCTGAATaGGCTGGTCAGCAAAGAATG | + |
|
Preference number: 5 (lower is better) Translates to: YLASVREEGRNGTDKAFLSHRSE*AGQQRM Trigger: CATTCTTTGCTGACCAGCCAATTCAGATCTATGAGA...CAGAAAGGCCTTGTCTGTTCCATTCCTTCCTTCCTCCCTCACTGATGCTAAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | TACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCTCAAGCTTCCGCAGAAGGTCCTaGAGATCGGAGCTGAAGTGT | + |
|
Preference number: 5 (lower is better) Translates to: YLKISQLSMKYKCGSVSSFRRRS*RSELKC Trigger: ACACTTCAGCTCCGATCTCAAGGACCTTCTGCGGAA...GCTTGAGACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS CCA 90 bp | TTCATAGTCATCGAAGTTGCTGGTATCGCCAGAGCCTCTGAACTTTaGTATGAATGGAGCCTCAACCTTTCTCTGATAAATAGCAATCCA | + |
|
Preference number: 5 (lower is better) Translates to: FIVIEVAGIARASEL*YEWSLNLSLINSNP Trigger: TGGATTGCTATTTATCAGAGAAAGGTTGAGGCTCCATTCATACCAAAGTTCAGAGGCTCTGGCGATACCAGCAACTTCGATGACTATGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005164.12 ENSMUST00000102515.10 ENSMUST00000106137.8 ENSMUST00000106138.8 |
||
| CDS-3UTR CAA 90 bp | CTGACGTACTTAAAGATATCACAGCTCAGCATGAAATACAAATGTGGCAGTGTCAACTCTTTCATTGATTaGTCCCATGAGGCAGTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: LTYLKISQLSMKYKCGSVNSFID*SHEAVC Trigger: GCACACTGCCTCATGGGACAAATCAATGAAAGAGTT...GACACTGCCACATTTGTATTTCATGCTGAGCTGTGATATCTTTAAGTACGTCAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS CAA 90 bp | CTCAGAGGCCCGAAGGCCGTCATCTTCCAGAGCTGCCCTGTGCTCTaGTGCGGTGCCTCTGGAGTGCCTGTGAAACAGGCGGCTAGCGAA | + |
|
Preference number: 6 (lower is better) Translates to: LRGPKAVIFQSCPVL*CGASGVPVKQAASE Trigger: TTCGCTAGCCGCCTGTTTCACAGGCACTCCAGAGGCACCGCACAAGAGCACAGGGCAGCTCTGGAAGATGACGGCCTTCGGGCCTCTGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||
| CDS CAA 72 bp | CCGAAGGCCGTCATCTTCCAGAGCTGCCCTGTGCTCTaGTGCGGTGCCTCTGGAGTGCCTGTGAAACAGGCG | + |
|
Preference number: 6 (lower is better) Translates to: PKAVIFQSCPVL*CGASGVPVKQA Trigger: CGCCTGTTTCACAGGCACTCCAGAGGCACCGCACAAGAGCACAGGGCAGCTCTGGAAGATGACGGCCTTCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000005164.12 |
||