Pregenerated sensors for PRKAB2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038205Ensembl transcript IDs: ENSMUST00000045743.13, ENSMUST00000130924.8, ENSMUST00000143927.8
Found 169 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTaGCGACCACCCACAGGCAGAGAGAACCTGTACAGCGGGGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: FWDAHSCGHCFPVRP*RPPTGRENLYSGAR Trigger: CCTGGCCCCGCTGTACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR TCA 90 bp | GGGTTCTCCACAGAGTCTCAGCTGAGGGAGGTGGCTTGGGATGGCTaGAGCGGCATCTCCCAGGACTCATGTACCAAGGCATTGAGCGAT | + |
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Preference number: 1 (lower is better) Translates to: GFSTESQLREVAWDG*SGISQDSCTKALSD Trigger: ATCGCTCAATGCCTTGGTACATGAGTCCTGGGAGATGCCGCTTCAGCCATCCCAAGCCACCTCCCTCAGCTGAGACTCTGTGGAGAACCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR CCA 90 bp | ACGAGGGTTCTCCACAGAGTCTCAGCTGAGGGAGGTGGCTTGGGATaGCTGAAGCGGCATCTCCCAGGACTCATGTACCAAGGCATTGAG | + |
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Preference number: 1 (lower is better) Translates to: TRVLHRVSAEGGGLG*LKRHLPGLMYQGIE Trigger: CTCAATGCCTTGGTACATGAGTCCTGGGAGATGCCGCTTCAGCCATCCCAAGCCACCTCCCTCAGCTGAGACTCTGTGGAGAACCCTCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | TGTGGGAATACAGAATCAGTCCATGCAAGGAAAGCCACCCTGCACTaGGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACACATCTCACCC | + |
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Preference number: 1 (lower is better) Translates to: CGNTESVHARKATLH*GSSKEGSSLAHISP Trigger: GGGTGAGATGTGTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTGCATGGACTGATTCTGTATTCCCACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR TCA 90 bp | GTGAGCTATCAGCCAGCCCTTCTAACTCTCTCCTGCATTTCCAGATaGGGCCATCAGCACCCACCCCTCTATCACCACAGCCTCACCCGT | + |
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Preference number: 1 (lower is better) Translates to: VSYQPALLTLSCISR*GHQHPPLYHHSLTR Trigger: ACGGGTGAGGCTGTGGTGATAGAGGGGTGGGTGCTGATGGCCTCATCTGGAAATGCAGGAGAGAGTTAGAAGGGCTGGCTGATAGCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR GCA 90 bp | CTCCCTGAGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTaGTTCCCTGGCCTCACAGGCACTGATCTACACTACAGGTGTTGT | + |
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Preference number: 1 (lower is better) Translates to: LPEPSVPAISLGLLR*FPGLTGTDLHYRCC Trigger: ACAACACCTGTAGTGTAGATCAGTGCCTGTGAGGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAGGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR CCA 90 bp | GGCCAGCTCAGTTCAAAGGCAAGGGAGATGCTTCTCCAGAATCCTTaGGGGCAAGGCGTGACGCCTTCCTCAGATGGGCTTATACAGCAG | + |
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Preference number: 1 (lower is better) Translates to: GQLSSKAREMLLQNP*GQGVTPSSDGLIQQ Trigger: CTGCTGTATAAGCCCATCTGAGGAAGGCGTCACGCCTTGCCCCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTGAACTGAGCTGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR TCA 90 bp | CAAAGGCAAGGGAGATGCTTCTCCAGAATCCTTGGGGGCAAGGCGTaGCGCCTTCCTCAGATGGGCTTATACAGCAGCGTGGTGACATAC | + |
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Preference number: 1 (lower is better) Translates to: QRQGRCFSRILGGKA*RLPQMGLYSSVVTY Trigger: GTATGTCACCACGCTGCTGTATAAGCCCATCTGAGGAAGGCGTCACGCCTTGCCCCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR GCA 90 bp | CTATTCACCCTTGTGATAAGAGGCCTCAGAGGTGTGCAGAGGACTTaGTGTGCCACCCTCATGTGGGAGAGCCAGGAGGTAGGTGAACTG | + |
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Preference number: 1 (lower is better) Translates to: LFTLVIRGLRGVQRT*CATLMWESQEVGEL Trigger: CAGTTCACCTACCTCCTGGCTCTCCCACATGAGGGTGGCACAGCAAGTCCTCTGCACACCTCTGAGGCCTCTTATCACAAGGGTGAATAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | GTCTGCTTGAACTCTTTAAGGGGACATTTTCAGTGCCAAGCTCCCTaGGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTGCTT | + |
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Preference number: 1 (lower is better) Translates to: VCLNSLRGHFQCQAP*AFSSCYLPWAPSLL Trigger: AAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAGGGAGCTTGGCACTGAAAATGTCCCCTTAAAGAGTTCAAGCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | CTCATCTGCAATCAAATGCAAAGCAGAGCATCCTATCAGAGGCTCTaGCACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAG | + |
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Preference number: 1 (lower is better) Translates to: LICNQMQSRASYQRL*HTQQPQNKPACQPQ Trigger: CTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCTGATAGGATGCTCTGCTTTGCATTTGATTGCAGATGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR GCA 90 bp | GCCTGGCACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTaGCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAA | + |
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Preference number: 1 (lower is better) Translates to: AWHTSHPWTPVVQNL*PTKILRVCYSLTLE Trigger: TTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR CCA 90 bp | GATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTaGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGG | + |
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Preference number: 1 (lower is better) Translates to: DPKSLLFSHFRKRSF*DAHSCGHCFPVRPW Trigger: CCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR GCA 90 bp | CTTATACAGCAGCGTGGTGACATACTTCTTCTTGTAGCGATGGGTTaGGCTAAGGACCATCACACTGTCCTTAATGGACAGTGCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: LIQQRGDILLLVAMG*AKDHHTVLNGQCIE Trigger: CTCTATGCACTGTCCATTAAGGACAGTGTGATGGTCCTTAGCGCAACCCATCGCTACAAGAAGAAGTATGTCACCACGCTGCTGTATAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR CCA 90 bp | CCTGAAAGACCCTTATTTCTTCCTGGTCTCATATTCATGAGTAACTaGAGTCTGCCGCTGACAGAAGACAGCAAGAACTTGGCTTTGAGG | + |
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Preference number: 1 (lower is better) Translates to: PERPLFLPGLIFMSN*SLPLTEDSKNLALR Trigger: CCTCAAAGCCAAGTTCTTGCTGTCTTCTGTCAGCGGCAGACTCCAGTTACTCATGAATATGAGACCAGGAAGAAATAAGGGTCTTTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | CATGGCTCGAGTGAAAGCTCTTCACACTGTCTAGGTCTTTTTCCTTaGGACTCTGGTGAACCTGTCTTACTGATAAGTGAAGTCAGACAG | + |
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Preference number: 1 (lower is better) Translates to: HGSSESSSHCLGLFP*DSGEPVLLISEVRQ Trigger: CTGTCTGACTTCACTTATCAGTAAGACAGGTTCACCAGAGTCTCAAGGAAAAAGACCTAGACAGTGTGAAGAGCTTTCACTCGAGCCATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | ATGTGCACACACACACACACCCACAGGGACTATTGCATATTGTTTTaGGGTCAAACATTTAAAGGCCCTGTTCCCACTTCCACGTCACAT | + |
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Preference number: 1 (lower is better) Translates to: MCTHTHTHRDYCILF*GQTFKGPVPTSTSH Trigger: ATGTGACGTGGAAGTGGGAACAGGGCCTTTAAATGTTTGACCTCAAAACAATATGCAATAGTCCCTGTGGGTGTGTGTGTGTGTGCACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR GCA 90 bp | ACACCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTaGTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATT | + |
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Preference number: 1 (lower is better) Translates to: TPVVQNLCPTKILRV*YSLTLEKEASGMPI Trigger: AATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR GCA 90 bp | GGCTGGCTCATCTCAGGAGACAGGAAGGCTCTCAACCAGAAACAGTaGCTAATGATTGACTTACATTTATCTGTAAAATGGAAGTGTCAA | + |
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Preference number: 1 (lower is better) Translates to: GWLISGDRKALNQKQ*LMIDLHLSVKWKCQ Trigger: TTGACACTTCCATTTTACAGATAAATGTAAGTCAATCATTAGGCACTGTTTCTGGTTGAGAGCCTTCCTGTCTCCTGAGATGAGCCAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | CTCAGGAGACAGGAAGGCTCTCAACCAGAAACAGTGCCTAATGATTaGCTTACATTTATCTGTAAAATGGAAGTGTCAAGATACTGGAAA | + |
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Preference number: 1 (lower is better) Translates to: LRRQEGSQPETVPND*LTFICKMEVSRYWK Trigger: TTTCCAGTATCTTGACACTTCCATTTTACAGATAAATGTAAGTCAATCATTAGGCACTGTTTCTGGTTGAGAGCCTTCCTGTCTCCTGAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR TCA 90 bp | TCAACTCCACCTAATGCTGGAAGTACTAAACATTTCTATTTTGAATaGAGCTTGCTTCTTCAAAGTACCGCTGAGAAGAACAACAAGCTG | + |
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Preference number: 1 (lower is better) Translates to: STPPNAGSTKHFYFE*SLLLQSTAEKNNKL Trigger: CAGCTTGTTGTTCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAGTACTTCCAGCATTAGGTGGAGTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR-3UTR CCA 90 bp | TGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACACATCTCACCCCTGGTTCCCAGTCAGGCCCTaGCGACCACCCACAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: CTEAALRRAAAWHTSHPWFPVRP*RPPTGR Trigger: TCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAA...CCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAAGCCACCCTGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACAGGAGGGCAGCAGCCTaGCACACATCTCACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: QGKPPCTEAALRRAAAWHRRAAA*HTSHPW Trigger: CCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCT...GTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGGTAAGGCCCAGGGGGTaGGCTGGACAGGTCTCGACA | + |
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Preference number: 2 (lower is better) Translates to: RSFWDAHSCGHCFPVRPWVRPRG*AGQVST Trigger: TGTCGAGACCTGTCCAGCTCACCCCCTGGGCCTTAC...CCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
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| 3UTR-3UTR TCA 90 bp | AGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGAAAGCCACCCTGCACTaGGGCAGCTCTAAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RSFWDAHSCGHCFPVRPWKATLH*GSSKEG Trigger: GCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTT...CCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAGCCTGGCACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCGGGTCCCTTGCCCAGTaGGTTTTGCATTACTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: SSLAHISPLDTSGPEPLPGSLAQ*VLHYWA Trigger: GGCCCAGTAATGCAAAACTCACTGGGCAAGGGACCC...GGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGCTGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR GCA 90 bp | AGCAGCCTGGCACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCCAAGGAAAGCCACCCTaGACTGAGGCAGCTCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: SSLAHISPLDTSGPEPLPQGKPP*TEAALR Trigger: CCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG...GGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGCTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | TCAGAGGCTCTGACACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAAGGAGGGCAGCAGCCTaGCACACATCTCACCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: SEALTHTAASKQTSLPASRRAAA*HTSHPW Trigger: CCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCT...TGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCTGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR TCA 90 bp | AGAGGCTCTGACACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAAAAGCCACCCTGCACTaGGGCAGCTCTAAGGAGGGC | + |
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Preference number: 2 (lower is better) Translates to: RGSDTHSSLKTNQPASLRKATLH*GSSKEG Trigger: GCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTT...TCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAAAGCCACCCTGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACCAAAGGCAAGGGAGATaGTTCTCCAGAATCCTTGGG | + |
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Preference number: 2 (lower is better) Translates to: QGKPPCTEAALRRAAAWHQRQGR*FSRILG Trigger: CCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTG...GTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR GCA 90 bp | CTGAGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTGCTTCCCTGGCCAAGAAGCTTCTGGGATaGCCATTCCTGTGGCCACTG | + |
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Preference number: 2 (lower is better) Translates to: LSLQFLLSPLGSFAASLAKKLLG*PFLWPL Trigger: CAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTT...GGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR-3UTR TCA 90 bp | ACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCGGGTCCCTTGCCCAGTaGGTTTTGCATTACTGGGCC | + |
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Preference number: 2 (lower is better) Translates to: THLTPGHQWSRTSAQQRSGSLAQ*VLHYWA Trigger: GGCCCAGTAATGCAAAACTCACTGGGCAAGGGACCC...GGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR CAA 90 bp | AGGCCAGCTCAGTTCAAAGGCAAGGGAGATGCTTCTCCAGAATCCTaGGGGGCAAGGCGTGACGCCTTCCTCAGATGGGCTTATACAGCA | + |
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Preference number: 2 (lower is better) Translates to: RPAQFKGKGDASPES*GARRDAFLRWAYTA Trigger: TGCTGTATAAGCCCATCTGAGGAAGGCGTCACGCCTTGCCCCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTGAACTGAGCTGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | ACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCCACACATCTCACCCCTaGACACCAGTGGTCCAGAAC | + |
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Preference number: 2 (lower is better) Translates to: THLTPGHQWSRTSAQQRSHTSHP*TPVVQN Trigger: GTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTG...GGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR TCA 90 bp | CTGAGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTGCTTCCCTGGCCCATTTGTCAAAAGCCTaGGGTCCTTTAACAGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: LSLQFLLSPLGSFAASLAHLSKA*GPLTAC Trigger: ACAGGCTGTTAAAGGACCTCAGGCTTTTGACAAATG...GGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR-3UTR GCA 90 bp | CCTATTCACCCTTGTGATAAGAGGCCTCAGAGGTGTGCAGAGGACTTGCTGTGCCAAGGAAAGCCACCCTaGACTGAGGCAGCTCTAAGG | + |
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Preference number: 2 (lower is better) Translates to: PIHPCDKRPQRCAEDLLCQGKPP*TEAALR Trigger: CCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG...GCACAGCAAGTCCTCTGCACACCTCTGAGGCCTCTTATCACAAGGGTGAATAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR-3UTR CCA 90 bp | AGCGGGGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTTCCCAGTCAGGCCCTaGCGACCACCCACAGGCAGA | + |
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Preference number: 2 (lower is better) Translates to: SGARRLPVTFLSYAYIWFFPVRP*RPPTGR Trigger: TCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAA...AAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCCCCGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCACCTCTAGTCTCTCAGGAGAGTCTAATCACACAGACTTTTCAGAAGGGGGATGCCCATTCCTGTaGCCACTGCTTCCCAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: PGTSSLSGESNHTDFSEGGCPFL*PLLPSQ Trigger: CTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCC...CCCTTCTGAAAAGTCTGTGTGATTAGACTCTCCTGAGAGACTAGAGGTGCCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | CAAGGAAAGCCACCCTGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACTTGTGTCACATAGTGTaGGAATACAGAATCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: QGKPPCTEAALRRAAAWHLCHIV*EYRISP Trigger: TGGACTGATTCTGTATTCCCACACTATGTGACACAA...GTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR GCA 90 bp | CAAGGAAAGCCACCCTGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACCATAAAGCTCTCATCTaGAATCAAATGCAAAGCAGA | + |
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Preference number: 2 (lower is better) Translates to: QGKPPCTEAALRRAAAWHHKALI*NQMQSR Trigger: TCTGCTTTGCATTTGATTGCAGATGAGAGCTTTATG...GTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR CCA 90 bp | AAGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGTTGTGTCACATAGTGTaGGAATACAGAATCAGTCCA | + |
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Preference number: 2 (lower is better) Translates to: KKLLGCPFLWPLLPSQALLCHIV*EYRISP Trigger: TGGACTGATTCTGTATTCCCACACTATGTGACACAA...CAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| 3UTR-3UTR GCA 90 bp | TCTAACTCTCTCCTGCATTTCCAGATGAGGCCATCAGCACCCACCCCTCTATCATACAGAATCAGTCCATaGAAGGAAAGCCACCCTGCA | + |
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Preference number: 2 (lower is better) Translates to: SNSLLHFQMRPSAPTPLSYRISP*KESHPA Trigger: TGCAGGGTGGCTTTCCTTGCATGGACTGATTCTGTA...TGATAGAGGGGTGGGTGCTGATGGCCTCATCTGGAAATGCAGGAGAGAGTTAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| 3UTR-3UTR TCA 90 bp | CCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCGGATGGGTGGGGATTTaGATCTCTCCTCAGATCGAA | + |
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Preference number: 2 (lower is better) Translates to: PVVQNLCPTKILRVCYSLGWVGI*ISPQIE Trigger: TTCGATCTGAGGAGAGATTCAAATCCCCACCCATCC...GAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
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| 3UTR CAA 90 bp | GTCTCTCAGGAGAGTCTAATCACACAGACTTTTCAGAAGGGTCCCTaGCCCAGTGAGTTTTGCATTACTGGGCCATGTATGAGATCTGAG | + |
|
Preference number: 2 (lower is better) Translates to: VSQESLITQTFQKGP*PSEFCITGPCMRSE Trigger: CTCAGATCTCATACATGGCCCAGTAATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAAAGTCTGTGTGATTAGACTCTCCTGAGAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | TGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTTCCCAGTCAGGCCCTaGCGACCACCCACAGGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CPTKILRVCYSLTLEKEAFPVRP*RPPTGR Trigger: TCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAA...AGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGCGCTAAGGACCATCACACTGTCCTTAATGGACAGTGCATAGAGATGGTTAGAAAAAGAAGCTTCTaGGATGCCCATTCCTGTGGC | + |
|
Preference number: 2 (lower is better) Translates to: GCAKDHHTVLNGQCIEMVRKRSF*DAHSCG Trigger: GCCACAGGAATGGGCATCCCAGAAGCTTCTTTTTCT...AACCATCTCTATGCACTGTCCATTAAGGACAGTGTGATGGTCCTTAGCGCAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | GGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTCACACATCTCACCCCTaGACACCAGTGGTCCAGAAC | + |
|
Preference number: 2 (lower is better) Translates to: GQETSGNLSLICIYMVLCHTSHP*TPVVQN Trigger: GTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTG...ACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR TCA 90 bp | CCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCTTAATTGTTCCAAGCTaGCTGGTAACCACAGGCTCT | + |
|
Preference number: 2 (lower is better) Translates to: PVVQNLCPTKILRVCYSLLIVPS*LVTTGS Trigger: AGAGCCTGTGGTTACCAGTCAGCTTGGAACAATTAA...GAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
||
| 3UTR-3UTR GCA 90 bp | CCTATTCACCCTTGTGATAAGAGGCCTCAGAGGTGTGCAGAGGACTTGCTGTGCCATAAAGCTCTCATCTaGAATCAAATGCAAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: PIHPCDKRPQRCAEDLLCHKALI*NQMQSR Trigger: TCTGCTTTGCATTTGATTGCAGATGAGAGCTTTATG...GCACAGCAAGTCCTCTGCACACCTCTGAGGCCTCTTATCACAAGGGTGAATAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR CAA 90 bp | AGGAAGTGTAGATACAACAATCCTACTGGGAAACAAGCAAGGCTTTaGAATCCTCCTGGGTGGCCCACTTCTAAATCAGCACTGAGGAAA | + |
|
Preference number: 2 (lower is better) Translates to: RKCRYNNPTGKQARL*NPPGWPTSKSALRK Trigger: TTTCCTCAGTGCTGATTTAGAAGTGGGCCACCCAGGAGGATTCAAAAGCCTTGCTTGTTTCCCAGTAGGATTGTTGTATCTACACTTCCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR TCA 90 bp | CCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCGGCTCTGACGGATCATaGACCCACTGTCCGTCCACA | + |
|
Preference number: 2 (lower is better) Translates to: PNKDPKSLLFSHFRKRSFGSDGS*THCPST Trigger: TGTGGACGGACAGTGGGTTCATGATCCGTCAGAGCC...GAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTCAAAGGCAAGGGAGATaGTTCTCCAGAATCCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GQETSGNLSLICIYMVLCQRQGR*FSRILG Trigger: CCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTG...ACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | CCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCGGATGCCCATTCCTGTaGCCACTGCTTCCCAGTCAG | + |
|
Preference number: 2 (lower is better) Translates to: PNKDPKSLLFSHFRKRSFGCPFL*PLLPSQ Trigger: CTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCC...GAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | CTAAACATTTCTATTTTGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGAGGAGGTGGCTTGGGATaGCTGAAGCGGCATCTCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LNISILNEACFFKVPLRRGGGLG*LKRHLP Trigger: TGGGAGATGCCGCTTCAGCCATCCCAAGCCACCTCC...TCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR TCA 90 bp | TTGTCACTTAAGGACAGACAAATGCCTAGATCCAGAGTCCTGAAAGACCCTTATAAGCATCAGCCTGAGTaGGAGACTGAAGACAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LSLKDRQMPRSRVLKDPYKHQPE*ETEDSF Trigger: AAAGCTGTCTTCAGTCTCTCACTCAGGCTGATGCTT...ATAAGGGTCTTTCAGGACTCTGGATCTAGGCATTTGTCTGTCCTTAAGTGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | CAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAACAAAGGCAAGGGAGATaGTTCTCCAGAATCCTTGGG | + |
|
Preference number: 2 (lower is better) Translates to: QNLCPTKILRVCYSLTLEQRQGR*FSRILG Trigger: CCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTG...TTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTAAGAAGCTTCTGGGATaGCCATTCCTGTGGCCACTG | + |
|
Preference number: 2 (lower is better) Translates to: LRVCYSLTLEKEASGMPIKKLLG*PFLWPL Trigger: CAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTT...AATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGTCACTTAAGGACAGACAAATGCCTAGATCCAGAGTCCTGAAAGACCCTTATGTGGTCCAGAACCTCTaGCCAACAAAGATCCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: LSLKDRQMPRSRVLKDPYVVQNL*PTKILR Trigger: TCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCAC...ATAAGGGTCTTTCAGGACTCTGGATCTAGGCATTTGTCTGTCCTTAAGTGACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTGTGGTCCAGAACCTCTaGCCAACAAAGATCCTAAGA | + |
|
Preference number: 2 (lower is better) Translates to: GQETSGNLSLICIYMVLCVVQNL*PTKILR Trigger: TCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCAC...ACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR TCA 90 bp | AAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTCCATTGGGTACATAAAATaGAGAGGGTTCTTGTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: KSLLFSHFRKRSFWDAHSIGYIK*RGFLWG Trigger: GCCCCACAAGAACCCTCTTCATTTTATGTACCCAAT...GGAATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR GCA 90 bp | GGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTTCATCTGCAATCAAATaGAAAGCAGAGCATCCTATC | + |
|
Preference number: 2 (lower is better) Translates to: GQETSGNLSLICIYMVLCSSAIK*KAEHPI Trigger: GATAGGATGCTCTGCTTTGCATTTGATTGCAGATGA...ACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CCA 90 bp | TATGTGCACACACACACACACCCACAGGGACTATTGCATATTGTTTTGAGGTCACCTTGGCTTTCAAAATaGAACACTATTCAGAAAGCT | + |
|
Preference number: 2 (lower is better) Translates to: YVHTHTHPQGLLHIVLRSPWLSK*NTIQKA Trigger: AGCTTTCTGAATAGTGTTCCATTTTGAAAGCCAAGG...TGACCTCAAAACAATATGCAATAGTCCCTGTGGGTGTGTGTGTGTGTGCACATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR TCA 90 bp | CTAAACATTTCTATTTTGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGATCCTTGAGACTCTGGTaGACCTGTCTTACTGATAAG | + |
|
Preference number: 2 (lower is better) Translates to: LNISILNEACFFKVPLRRSLRLW*TCLTDK Trigger: CTTATCAGTAAGACAGGTTCACCAGAGTCTCAAGGA...TCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | CTAAACATTTCTATTTTGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGATTCAGAAGGGTCCCTTaGCCAGTGAGTTTTGCATTA | + |
|
Preference number: 2 (lower is better) Translates to: LNISILNEACFFKVPLRRFRRVP*PVSFAL Trigger: TAATGCAAAACTCACTGGGCAAGGGACCCTTCTGAA...TCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | TGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTGTCCTTAATGGACAGTaGATAGAGATGGTTCAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: CPTKILRVCYSLTLEKEAVLNGQ*IEMVQH Trigger: ATGCTGAACCATCTCTATGCACTGTCCATTAAGGAC...AGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR TCA 90 bp | CTAAACATTTCTATTTTGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGACGTTTTACTACCAACTaGCCCTGCAAAATTCCCATA | + |
|
Preference number: 2 (lower is better) Translates to: LNISILNEACFFKVPLRRRFTTN*PCKIPI Trigger: TATGGGAATTTTGCAGGGTCAGTTGGTAGTAAAACG...TCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | CTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTCATAAAGCTCTCATCTaGAATCAAATGCAAAGCAGA | + |
|
Preference number: 2 (lower is better) Translates to: LRVCYSLTLEKEASGMPIHKALI*NQMQSR Trigger: TCTGCTTTGCATTTGATTGCAGATGAGAGCTTTATG...AATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR CAA 90 bp | TCAAATCAACTCCACCTAATGCTGGAAGTACTAAACATTTCTATTTaGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGAACAACA | + |
|
Preference number: 2 (lower is better) Translates to: SNQLHLMLEVLNISI*NEACFFKVPLRRTT Trigger: TGTTGTTCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAGTACTTCCAGCATTAGGTGGAGTTGATTTGA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR GCA 90 bp | AAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATTCATCTGCAATCAAATaGAAAGCAGAGCATCCTATC | + |
|
Preference number: 2 (lower is better) Translates to: KDPKSLLFSHFRKRSFWDSSAIK*KAEHPI Trigger: GATAGGATGCTCTGCTTTGCATTTGATTGCAGATGA...ATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR CCA 72 bp | GCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTaGCGACCACCCACAGGCAGAGAGAACCTGTACAGC | + |
|
Preference number: 3 (lower is better) Translates to: AHSCGHCFPVRP*RPPTGRENLYS Trigger: GCTGTACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR GCA 72 bp | AAAAGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTaGTTCCCAGTCAGGCCCTGGCGACCACCCACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: KRSFWDAHSCGH*FPVRPWRPPTG Trigger: GCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTTTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR TCA 72 bp | CTGTGCCACCCTCATGTGGGAGAGCCAGGAGGTAGGTaGACTGACCAGCAGGTCCCTTTCAATGTGGCTGGC | + |
|
Preference number: 3 (lower is better) Translates to: LCHPHVGEPGGR*TDQQVPFNVAG Trigger: GCCAGCCACATTGAAAGGGACCTGCTGGTCAGTTCACCTACCTCCTGGCTCTCCCACATGAGGGTGGCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR CCA 72 bp | CTAAGGAGGGCAGCAGCCTGGCACACATCTCACCCCTaGACACCAGTGGTCCAGAACCTCTGCCCAACAAAG | + |
|
Preference number: 3 (lower is better) Translates to: LRRAAAWHTSHP*TPVVQNLCPTK Trigger: CTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCTTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CAA 90 bp | GCCACTGCTTCCCAGTCAGGCCCTGGCGACCACCCACAGGCAGAGAGAACCTGTAAACACATACATTTCTaGACCGTAAGGCCCAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: ATASQSGPGDHPQAERTCKHIHF*TVRPRG Trigger: CCCCCTGGGCCTTACGGTCAAGAAATGTATGTGTTT...ACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
||
| 3UTR TCA 72 bp | ACAGAATCAGTCCATGCAAGGAAAGCCACCCTGCACTaGGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACAC | + |
|
Preference number: 3 (lower is better) Translates to: TESVHARKATLH*GSSKEGSSLAH Trigger: GTGTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTGCATGGACTGATTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR TCA 72 bp | ACAGAGTCTCAGCTGAGGGAGGTGGCTTGGGATGGCTaGAGCGGCATCTCCCAGGACTCATGTACCAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: TESQLREVAWDG*SGISQDSCTKA Trigger: TGCCTTGGTACATGAGTCCTGGGAGATGCCGCTTCAGCCATCCCAAGCCACCTCCCTCAGCTGAGACTCTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | CAGCCAGCCCTTCTAACTCTCTCCTGCATTTCCAGATaGGGCCATCAGCACCCACCCCTCTATCACCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: QPALLTLSCISR*GHQHPPLYHHS Trigger: GCTGTGGTGATAGAGGGGTGGGTGCTGATGGCCTCATCTGGAAATGCAGGAGAGAGTTAGAAGGGCTGGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | CCGGCCCAAGAGGCCAGGGCTCTTGAAGAAGCTAGCTaGGCCCTTCAGAGGTGTGAATCCTACTCAGGTCTA | + |
|
Preference number: 3 (lower is better) Translates to: PAQEARALEEAS*ALQRCESYSGL Trigger: TAGACCTGAGTAGGATTCACACCTCTGAAGGGCTCAGCTAGCTTCTTCAAGAGCCCTGGCCTCTTGGGCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR GCA 72 bp | GGAATACAGAATCAGTCCATGCAAGGAAAGCCACCCTaGACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: GIQNQSMQGKPP*TEAALRRAAAW Trigger: CCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCAGGGTGGCTTTCCTTGCATGGACTGATTCTGTATTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR GCA 72 bp | CTTGTGATAAGAGGCCTCAGAGGTGTGCAGAGGACTTaGTGTGCCACCCTCATGTGGGAGAGCCAGGAGGTA | + |
|
Preference number: 3 (lower is better) Translates to: LVIRGLRGVQRT*CATLMWESQEV Trigger: TACCTCCTGGCTCTCCCACATGAGGGTGGCACAGCAAGTCCTCTGCACACCTCTGAGGCCTCTTATCACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR GCA 72 bp | CCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTaGTTCCCTGGCCTCACAGGCACTGATCTACACTAC | + |
|
Preference number: 3 (lower is better) Translates to: PSVPAISLGLLR*FPGLTGTDLHY Trigger: GTAGTGTAGATCAGTGCCTGTGAGGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | CCACAGCCTCACCCGTCAGAGAAGCATCAGCCTGAGTaGGAGACTGAAGACAGCTTTCCCCACCCTTCCATA | + |
|
Preference number: 3 (lower is better) Translates to: PQPHPSEKHQPE*ETEDSFPHPSI Trigger: TATGGAAGGGTGGGGAAAGCTGTCTTCAGTCTCTCACTCAGGCTGATGCTTCTCTGACGGGTGAGGCTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR CCA 72 bp | AGTTCAAAGGCAAGGGAGATGCTTCTCCAGAATCCTTaGGGGCAAGGCGTGACGCCTTCCTCAGATGGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SSKAREMLLQNP*GQGVTPSSDGL Trigger: AAGCCCATCTGAGGAAGGCGTCACGCCTTGCCCCCAAGGATTCTGGAGAAGCATCTCCCTTGCCTTTGAACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR CCA 72 bp | GAGGTAGGTGAACTGACCAGCAGGTCCCTTTCAATGTaGCTGGCTCATCTCAGGAGACAGGAAGGCTCTCAA | + |
|
Preference number: 3 (lower is better) Translates to: EVGELTSRSLSM*LAHLRRQEGSQ Trigger: TTGAGAGCCTTCCTGTCTCCTGAGATGAGCCAGCCACATTGAAAGGGACCTGCTGGTCAGTTCACCTACCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | AACTCTTTAAGGGGACATTTTCAGTGCCAAGCTCCCTaGGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: NSLRGHFQCQAP*AFSSCYLPWAP Trigger: AGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAGGGAGCTTGGCACTGAAAATGTCCCCTTAAAGAGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | GCCCTTCAGAGGTGTGAATCCTACTCAGGTCTAGGTTaGCAGGAGGCTAATAACCATGGCTCGAGTGAAAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALQRCESYSGLG*QEANNHGSSES Trigger: GCTTTCACTCGAGCCATGGTTATTAGCCTCCTGTCAACCTAGACCTGAGTAGGATTCACACCTCTGAAGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR GCA 72 bp | CTCAGCTACAGAGGGGAACCCAAGATGGCCAACACCTaGTATATCACTTACTGTAGGTGTCCCTTGACTGTG | + |
|
Preference number: 3 (lower is better) Translates to: LSYRGEPKMANT*YITYCRCPLTV Trigger: CACAGTCAAGGGACACCTACAGTAAGTGATATAGCAGGTGTTGGCCATCTTGGGTTCCCCTCTGTAGCTGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | GCCTTGGCTTTCAAAATGGAACACTATTCAGAAAGCTaGCTGGACCACGAGGGTTCTCCACAGAGTCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: ALAFKMEHYSES*LDHEGSPQSLS Trigger: GCTGAGACTCTGTGGAGAACCCTCGTGGTCCAGTCAGCTTTCTGAATAGTGTTCCATTTTGAAAGCCAAGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR GCA 72 bp | ACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTaGCCAACAAAGATCCTAAGAGTTTGCTATTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: TSHPWTPVVQNL*PTKILRVCYSL Trigger: GAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR GCA 72 bp | CAGCGTGGTGACATACTTCTTCTTGTAGCGATGGGTTaGGCTAAGGACCATCACACTGTCCTTAATGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: QRGDILLLVAMG*AKDHHTVLNGQ Trigger: CTGTCCATTAAGGACAGTGTGATGGTCCTTAGCGCAACCCATCGCTACAAGAAGAAGTATGTCACCACGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR TCA 72 bp | AATCAAATGCAAAGCAGAGCATCCTATCAGAGGCTCTaGCACACACAGCAGCCTCAAAACAAACCAGCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: NQMQSRASYQRL*HTQQPQNKPAC Trigger: GCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCTGATAGGATGCTCTGCTTTGCATTTGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR-3UTR CAA 90 bp | CCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCTTTCAGAAGGGTCCCTaGCCCAGTGAGTTTTGCATT | + |
|
Preference number: 3 (lower is better) Translates to: PVVQNLCPTKILRVCYSLFQKGP*PSEFCI Trigger: AATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAA...GAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTGGACCACTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR TCA 72 bp | GATACAACAATCCTACTGGGAAACAAGCAAGGCTTTTaGATCCTCCTGGGTGGCCCACTTCTAAATCAGCAC | + |
|
Preference number: 3 (lower is better) Translates to: DTTILLGNKQGF*ILLGGPLLNQH Trigger: GTGCTGATTTAGAAGTGGGCCACCCAGGAGGATTCAAAAGCCTTGCTTGTTTCCCAGTAGGATTGTTGTATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR CCA 72 bp | AGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTaGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: SLLFSHFRKRSF*DAHSCGHCFPV Trigger: GACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| 3UTR CCA 72 bp | ACTGGGAAACAAGCAAGGCTTTTGAATCCTCCTGGGTaGCCCACTTCTAAATCAGCACTGAGGAAAAACAGA | + |
|
Preference number: 3 (lower is better) Translates to: TGKQARLLNPPG*PTSKSALRKNR Trigger: TCTGTTTTTCCTCAGTGCTGATTTAGAAGTGGGCCACCCAGGAGGATTCAAAAGCCTTGCTTGTTTCCCAGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR CAA 90 bp | CAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAGGATGGGTGGGGATTaGAATCTCTCCTCAGATCGA | + |
|
Preference number: 3 (lower is better) Translates to: QNLCPTKILRVCYSLTLERMGGD*NLSSDR Trigger: TCGATCTGAGGAGAGATTCAAATCCCCACCCATCCT...TTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000130924.8 |
||
| 3UTR TCA 72 bp | GCCCCAGGTCACAAGAATATGAGGACTAAGTATCTCTaGGAACAGAAGGAATACCACATACACATATGTGCA | + |
|
Preference number: 3 (lower is better) Translates to: APGHKNMRTKYL*EQKEYHIHICA Trigger: TGCACATATGTGTATGTGGTATTCCTTCTGTTCTCAGAGATACTTAGTCCTCATATTCTTGTGACCTGGGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | CACTTAAGGACAGACAAATGCCTAGATCCAGAGTCCTaGAAGACCCTTATTTCTTCCTGGTCTCATATTCAT | + |
|
Preference number: 3 (lower is better) Translates to: HLRTDKCLDPES*KTLISSWSHIH Trigger: ATGAATATGAGACCAGGAAGAAATAAGGGTCTTTCAGGACTCTGGATCTAGGCATTTGTCTGTCCTTAAGTG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | GTTCACTGCAGAAATCAGTCTTTCAATCTCCAGTTGTaGTTGTCACTTAAGGACAGACAAATGCCTAGATCC | + |
|
Preference number: 3 (lower is better) Translates to: VHCRNQSFNLQL*LSLKDRQMPRS Trigger: GGATCTAGGCATTTGTCTGTCCTTAAGTGACAATCACAACTGGAGATTGAAAGACTGATTTCTGCAGTGAAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR-3UTR CAA 90 bp | CTAAACATTTCTATTTTGAATGAAGCTTGCTTCTTCAAAGTACCGCTGAGAAGAACCGAGGGTAGTTCCTaGCCTCACACATCTTTAATG | + |
|
Preference number: 3 (lower is better) Translates to: LNISILNEACFFKVPLRRTEGSS*PHTSLM Trigger: CATTAAAGATGTGTGAGGCAAGGAACTACCCTCGGT...TCTTCTCAGCGGTACTTTGAAGAAGCAAGCTTCATTCAAAATAGAAATGTTTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR TCA 72 bp | TATTTATCTGCTCTTAAGCCCCAGGTCACAAGAATATaGGGACTAAGTATCTCTGAGAACAGAAGGAATACC | + |
|
Preference number: 3 (lower is better) Translates to: YLSALKPQVTRI*GLSISENRRNT Trigger: GGTATTCCTTCTGTTCTCAGAGATACTTAGTCCTCATATTCTTGTGACCTGGGGCTTAAGAGCAGATAAATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR GCA 72 bp | ATCTCAGGAGACAGGAAGGCTCTCAACCAGAAACAGTaGCTAATGATTGACTTACATTTATCTGTAAAATGG | + |
|
Preference number: 3 (lower is better) Translates to: ISGDRKALNQKQ*LMIDLHLSVKW Trigger: CCATTTTACAGATAAATGTAAGTCAATCATTAGGCACTGTTTCTGGTTGAGAGCCTTCCTGTCTCCTGAGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR TCA 90 bp | CCTGGCGACCACCCACAGGCAGAGAGAACCTGTACAGCGGGGCCAGGAGACTTCTGGAGTCGGGCAGGCTaGAGACGCTGGGGTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: PGDHPQAERTCTAGPGDFWSRAG*RRWGRP Trigger: CGGACGACCCCAGCGTCTTCAGCCTGCCCGACTCCA...GAAGTCTCCTGGCCCCGCTGTACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | TGGCCACTGCTTCCCAGTCAGGCCCTGGCGACCACCCACAGGCAGAGAGAACCTTCCTTTCCCGGGCCATaGCCGCCGCCCTCAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: WPLLPSQALATTHRQREPSFPGP*PPPSAR Trigger: TCGAGCTGAGGGCGGCGGCCATGGCCCGGGAAAGGA...AGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | TGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACACATCTCACCCCTGGTGGAGTCGGGCAGGCTaGAGACGCTGGGGTCGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: CTEAALRRAAAWHTSHPWWSRAG*RRWGRP Trigger: CGGACGACCCCAGCGTCTTCAGCCTGCCCGACTCCA...CCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | GCCACTGCTTCCCAGTCAGGCCCTGGCGACCACCCACAGGCAGAGAGAACCTGTGTAAGGCCCAGGGGGTaGGCTGGACAGGTCTCGACA | + |
|
Preference number: 4 (lower is better) Translates to: ATASQSGPGDHPQAERTCVRPRG*AGQVST Trigger: TGTCGAGACCTGTCCAGCTCACCCCCTGGGCCTTAC...ACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGCAGCTTTGGCTCCGTaGCGCTCCCCGGACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: KKLLGCPFLWPLLPSQALAALAP*RSPDTR Trigger: GCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGC...CAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | CCTGGCGACCACCCACAGGCAGAGAGAACCTGTACAGCGGGGCCAGGAGACTTCGGCTCTGACGGATCATaGACCCACTGTCCGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGDHPQAERTCTAGPGDFGSDGS*THCPST Trigger: TGTGGACGGACAGTGGGTTCATGATCCGTCAGAGCC...GAAGTCTCCTGGCCCCGCTGTACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | AGAGGCTCTGACACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGCAGCTTTGGCTCCGTaGCGCTCCCCGGACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RGSDTHSSLKTNQPASLRAALAP*RSPDTR Trigger: GCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGC...TCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | AAGAAGCTTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGTGGGCCGGGCCTGCTaGGCGGGCTTCACAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: KKLLGCPFLWPLLPSQALVGRAC*AGFTES Trigger: TGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCAC...CAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAAGCTTCTT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR GCA 90 bp | ACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCAACAAAGATCCACGGTGGGCCGGGCCTaGTGGGCGGGCTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: THLTPGHQWSRTSAQQRSTVGRA*WAGFTE Trigger: TTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGT...GGATCTTTGTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | ATCAGAGGCTCTGACACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCCAGCTCGAGCAGCTTTaGCTCCGTGGCGCTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: IRGSDTHSSLKTNQPASLQLEQL*LRGAPR Trigger: CCGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTG...GAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTGCTTCCCTGGCCGGCTCTGACGGATCATaGACCCACTGTCCGTCCACA | + |
|
Preference number: 4 (lower is better) Translates to: LSLQFLLSPLGSFAASLAGSDGS*THCPST Trigger: TGTGGACGGACAGTGGGTTCATGATCCGTCAGAGCC...GGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR GCA 90 bp | GGTGACATACTTCTTCTTGTAGCGATGGGTTGCGCTAAGGACCATCACACTGTCACGGTGGGCCGGGCCTaGTGGGCGGGCTTCACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GDILLLVAMGCAKDHHTVTVGRA*WAGFTE Trigger: TTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGT...GACAGTGTGATGGTCCTTAGCGCAACCCATCGCTACAAGAAGAAGTATGTCACC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | CACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGGAGGCCAGCTCAAGGGGGCAGGATGGGTaGGGATTTGAATCTCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: HTAASKQTSLPASEEASSRGQDG*GFESLL Trigger: GAGGAGAGATTCAAATCCCCACCCATCCTGCCCCCT...TGAGCTGGCCTCCTCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR CCA 90 bp | AGCGGGGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTGCAGCTTTGGCTCCGTaGCGCTCCCCGGACACCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SGARRLPVTFLSYAYIWFAALAP*RSPDTR Trigger: GCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGC...AAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCCCCGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | TTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGCGACCATTAATTGTTCCAAGCTaGCTGGTAACCACAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: FWDAHSCGHCFPVRPWRPLIVPS*LVTTGS Trigger: AGAGCCTGTGGTTACCAGTCAGCTTGGAACAATTAA...TGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | GTCTCTTTACAAGTGTTTCCTGGTGACAGGGGCAGCATTCCCCAGGGTCAGGGGGGATGGGTGGGGATTTaGATCTCTCCTCAGATCGAA | + |
|
Preference number: 4 (lower is better) Translates to: VSLQVFPGDRGSIPQGQGGWVGI*ISPQIE Trigger: TTCGATCTGAGGAGAGATTCAAATCCCCACCCATCC...CCCCTGACCCTGGGGAATGCTGCCCCTGTCACCAGGAAACACTTGTAAAGAGAC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR CCA 90 bp | AGCCTGGCACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCAACCTGGAAGATCCAGGATaGCAACGAAGTCATTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: SLAHISPLDTSGPEPLPNLEDPG*QRSHYD Trigger: GTCATAATGACTTCGTTGCCATCCTGGATCTTCCAG...GTTGGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| 3UTR CAA 72 bp | CTTCCTTTGTACTTCCGGCCCAAGAGGCCAGGGCTCTaGAAGAAGCTAGCTGAGCCCTTCAGAGGTGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LPLYFRPKRPGL*KKLAEPFRGVN Trigger: ATTCACACCTCTGAAGGGCTCAGCTAGCTTCTTCAAGAGCCCTGGCCTCTTGGGCCGGAAGTACAAAGGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| 3UTR CAA 72 bp | GGGCGAAGGTTTCTCTCAGAAACGGGTTTTCTTCCTTaGTACTTCCGGCCCAAGAGGCCAGGGCTCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GRRFLSETGFLP*YFRPKRPGLLK Trigger: CTTCAAGAGCCCTGGCCTCTTGGGCCGGAAGTACAAAGGAAGAAAACCCGTTTCTGAGAGAAACCTTCGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR TCA 90 bp | ACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGGAGGCCAGCTCAGTATACAGCAGCGTGGTaGCATACTTCTTCTTGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TQQPQNKPACQPQRRPAQYTAAW*HTSSCS Trigger: GCTACAAGAAGAAGTATGTCACCACGCTGCTGTATA...CTGAGCTGGCCTCCTCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR CCA 90 bp | GCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTTCAGCTCGAGCAGCTTTaGCTCCGTGGCGCTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: ARRLPVTFLSYAYIWFCVQLEQL*LRGAPR Trigger: CCGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTG...AACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | AAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTCCTCCTTTCCCGGGCCATaGCCGCCGCCCTCAGCTCGA | + |
|
Preference number: 4 (lower is better) Translates to: KSLLFSHFRKRSFWDAHSSFPGP*PPPSAR Trigger: TCGAGCTGAGGGCGGCGGCCATGGCCCGGGAAAGGA...GGAATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | CAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAGTGGGCCGGGCCTGCTaGGCGGGCTTCACAGAATCA | + |
|
Preference number: 4 (lower is better) Translates to: QNLCPTKILRVCYSLTLEVGRAC*AGFTES Trigger: TGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCAC...TTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR GCA 90 bp | TCAGGAGACAGGAAGGCTCTCAACCAGAAACAGTGCCTAATGATTGACTTACATCCCACCATGATCTTGTaGTCCTTTCCCGGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SGDRKALNQKQCLMIDLHPTMIL*SFPGPW Trigger: CCATGGCCCGGGAAAGGAGCACAAGATCATGGTGGG...ATGTAAGTCAATCATTAGGCACTGTTTCTGGTTGAGAGCCTTCCTGTCTCCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
||
| CDS-3UTR GCA 90 bp | AGTCTAATCACACAGACTTTTCAGAAGGGTCCCTTGCCCAGTGAGTTTTGCATTCCCACCATGATCTTGTaGTCCTTTCCCGGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: SLITQTFQKGPLPSEFCIPTMIL*SFPGPW Trigger: CCATGGCCCGGGAAAGGAGCACAAGATCATGGTGGG...AATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAAAGTCTGTGTGATTAGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | CAGAACCTCTGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAACCGTGCTCCCCACCATaGTCTTGTGCTCCTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: QNLCPTKILRVCYSLTLEPCSPP*SCAPFP Trigger: CGGGAAAGGAGCACAAGATCATGGTGGGGAGCACGG...TTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCAGAGGTTCTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | CTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTCCGTGCTCCCCACCATaGTCTTGTGCTCCTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: LRVCYSLTLEKEASGMPIPCSPP*SCAPFP Trigger: CGGGAAAGGAGCACAAGATCATGGTGGGGAGCACGG...AATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | ATCAAATGCAAAGCAGAGCATCCTATCAGAGGCTCTGACACACACAGCAGCCTCTTAATTGTTCCAAGCTaGCTGGTAACCACAGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: IKCKAEHPIRGSDTHSSLLIVPS*LVTTGS Trigger: AGAGCCTGTGGTTACCAGTCAGCTTGGAACAATTAA...GAGGCTGCTGTGTGTGTCAGAGCCTCTGATAGGATGCTCTGCTTTGCATTTGAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR CCA 90 bp | GGCACCTCTAGTCTCTCAGGAGAGTCTAATCACACAGACTTTTCAGAAGGGTCCCTGGAAGATCCAGGATaGCAACGAAGTCATTATGAC | + |
|
Preference number: 4 (lower is better) Translates to: GTSSLSGESNHTDFSEGSLEDPG*QRSHYD Trigger: GTCATAATGACTTCGTTGCCATCCTGGATCTTCCAG...GGACCCTTCTGAAAAGTCTGTGTGATTAGACTCTCCTGAGAGACTAGAGGTGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
||
| CDS-3UTR TCA 90 bp | TGCCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTCCGTGCTCCCCACCATaGTCTTGTGCTCCTTTCCCG | + |
|
Preference number: 4 (lower is better) Translates to: CPTKILRVCYSLTLEKEAPCSPP*SCAPFP Trigger: CGGGAAAGGAGCACAAGATCATGGTGGGGAGCACGG...AGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGGCA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR GCA 90 bp | TGCGCTAAGGACCATCACACTGTCCTTAATGGACAGTGCATAGAGATGGTTCAGGAATCATCCAAATCCTaGTGCCAGGGTACAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: CAKDHHTVLNGQCIEMVQESSKS*CQGTNS Trigger: AGAGTTTGTACCCTGGCAGCAGGATTTGGATGATTC...CTGAACCATCTCTATGCACTGTCCATTAAGGACAGTGTGATGGTCCTTAGCGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000143927.8 |
||
| 3UTR CAA 72 bp | GAGAGTCTAATCACACAGACTTTTCAGAAGGGTCCCTaGCCCAGTGAGTTTTGCATTACTGGGCCATGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ESLITQTFQKGP*PSEFCITGPCM Trigger: CATACATGGCCCAGTAATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAAAGTCTGTGTGATTAGACTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
||
| CDS-3UTR GCA 90 bp | AGCGGGGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTGAATCATCCAAATCCTaGTGCCAGGGTACAAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: SGARRLPVTFLSYAYIWFESSKS*CQGTNS Trigger: AGAGTTTGTACCCTGGCAGCAGGATTTGGATGATTC...AAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCCCCGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| 3UTR CAA 72 bp | AGATACAACAATCCTACTGGGAAACAAGCAAGGCTTTaGAATCCTCCTGGGTGGCCCACTTCTAAATCAGCA | + |
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Preference number: 4 (lower is better) Translates to: RYNNPTGKQARL*NPPGWPTSKSA Trigger: TGCTGATTTAGAAGTGGGCCACCCAGGAGGATTCAAAAGCCTTGCTTGTTTCCCAGTAGGATTGTTGTATCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR GCA 90 bp | AAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATCCCACCATGATCTTGTaGTCCTTTCCCGGGCCATGG | + |
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Preference number: 4 (lower is better) Translates to: KDPKSLLFSHFRKRSFWDPTMIL*SFPGPW Trigger: CCATGGCCCGGGAAAGGAGCACAAGATCATGGTGGG...ATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS-3UTR GCA 90 bp | AGTCTAATCACACAGACTTTTCAGAAGGGTCCCTTGCCCAGTGAGTTTTGCATTTCATCCAAATCCTGCTaGCAGGGTACAAACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: SLITQTFQKGPLPSEFCISSKSC*QGTNSL Trigger: CAAAGAGTTTGTACCCTGGCAGCAGGATTTGGATGA...AATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAAAGTCTGTGTGATTAGACT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| 3UTR CAA 72 bp | AACTGGAGTCTGCCGCTGACAGAAGACAGCAAGAACTaGGCTTTGAGGATTAGTCATAACACACCAACAAAA | + |
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Preference number: 4 (lower is better) Translates to: NWSLPLTEDSKN*ALRISHNTPTK Trigger: TTTTGTTGGTGTGTTATGACTAATCCTCAAAGCCAAGTTCTTGCTGTCTTCTGTCAGCGGCAGACTCCAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR GCA 90 bp | TTGTCACTTAAGGACAGACAAATGCCTAGATCCAGAGTCCTGAAAGACCCTTATTCATCCAAATCCTGCTaGCAGGGTACAAACTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSLKDRQMPRSRVLKDPYSSKSC*QGTNSL Trigger: CAAAGAGTTTGTACCCTGGCAGCAGGATTTGGATGA...ATAAGGGTCTTTCAGGACTCTGGATCTAGGCATTTGTCTGTCCTTAAGTGACAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR GCA 90 bp | AGTCTAATCACACAGACTTTTCAGAAGGGTCCCTTGCCCAGTGAGTTTTGCATTGTCCTTAATGGACAGTaGATAGAGATGGTTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: SLITQTFQKGPLPSEFCIVLNGQ*IEMVQH Trigger: ATGCTGAACCATCTCTATGCACTGTCCATTAAGGAC...AATGCAAAACTCACTGGGCAAGGGACCCTTCTGAAAAGTCTGTGTGATTAGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR CAA 90 bp | AGCAGCCTGGCACACATCTCACCCCTGGACACCAGTGGTCCAGAACCTCTGCCCTCAGCTCGAGCAGCTTaGGCTCCGTGGCGCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: SSLAHISPLDTSGPEPLPSARAA*APWRSP Trigger: CGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGA...GGGCAGAGGTTCTGGACCACTGGTGTCCAGGGGTGAGATGTGTGCCAGGCTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS GCA 90 bp | GTGGGCCGGGCCTGCTGGGCGGGCTTCACAGAATCATCCAAATCCTaGTGCCAGGGTACAAACTCTTTGTCCCCGGGGAGCTTGGAGTCG | + |
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Preference number: 5 (lower is better) Translates to: VGRACWAGFTESSKS*CQGTNSLSPGSLES Trigger: CGACTCCAAGCTCCCCGGGGACAAAGAGTTTGTACCCTGGCAGCAGGATTTGGATGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS GCA 90 bp | ACCTCCTTGCCTCCTTCAGACCAGCGGATAACGGTGGGCCGGGCCTaGTGGGCGGGCTTCACAGAATCATCCAAATCCTGCTGCCAGGGT | + |
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Preference number: 5 (lower is better) Translates to: TSLPPSDQRITVGRA*WAGFTESSKSCCQG Trigger: ACCCTGGCAGCAGGATTTGGATGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGTTATCCGCTGGTCTGAAGGAGGCAAGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | CACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGGAGGCCAGCTCATTGTCCCCGGGGAGCTaGGAGTCGGGCAGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: HTAASKQTSLPASEEASSLSPGS*ESGRLK Trigger: CTTCAGCCTGCCCGACTCCAAGCTCCCCGGGGACAA...TGAGCTGGCCTCCTCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS CCA 90 bp | TCCTTGCCTCCTTCAGACCAGCGGATAACGGTGGGCCGGGCCTGCTaGGCGGGCTTCACAGAATCATCCAAATCCTGCTGCCAGGGTACA | + |
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Preference number: 5 (lower is better) Translates to: SLPPSDQRITVGRAC*AGFTESSKSCCQGT Trigger: TGTACCCTGGCAGCAGGATTTGGATGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGTTATCCGCTGGTCTGAAGGAGGCAAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | CTGAGCCTTCAGTTCCTGCTATCTCCCTTGGGCTCCTTCGCTGCTTCCCTGGCCCTCCCCACCATGATCTaGTGCTCCTTTCCCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: LSLQFLLSPLGSFAASLALPTMI*CSFPGP Trigger: TGGCCCGGGAAAGGAGCACAAGATCATGGTGGGGAG...GGCCAGGGAAGCAGCGAAGGAGCCCAAGGGAGATAGCAGGAACTGAAGGCTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR CAA 90 bp | TGCACTGAGGCAGCTCTAAGGAGGGCAGCAGCCTGGCACACATCTCACCCCTGGCAGGGTACAAACTCTTaGTCCCCGGGGAGCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CTEAALRRAAAWHTSHPWQGTNS*SPGSLE Trigger: CTCCAAGCTCCCCGGGGACAAAGAGTTTGTACCCTG...CCAGGGGTGAGATGTGTGCCAGGCTGCTGCCCTCCTTAGAGCTGCCTCAGTGCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | TTCTGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGCGACCAGAGATGAAGACCTCCTaGCCTCCTTCAGACCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: FWDAHSCGHCFPVRPWRPEMKTS*PPSDQR Trigger: CCGCTGGTCTGAAGGAGGCAAGGAGGTCTTCATCTC...TGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | TGGGATGCCCATTCCTGTGGCCACTGCTTCCCAGTCAGGCCCTGGCGACCACCCATCTTGGTGCTCCAATaGTTGAAGGACCCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: WDAHSCGHCFPVRPWRPPILVLQ*LKDPEM Trigger: CATCTCTGGGTCCTTCAACAATTGGAGCACCAAGAT...GGGTGGTCGCCAGGGCCTGACTGGGAAGCAGTGGCCACAGGAATGGGCATCCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | GGCACCTCTAGTCTCTCAGGAGAGTCTAATCACACAGACTTTTCAGAAGGGTCCTCAGCTCGAGCAGCTTaGGCTCCGTGGCGCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: GTSSLSGESNHTDFSEGSSARAA*APWRSP Trigger: CGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGA...GGACCCTTCTGAAAAGTCTGTGTGATTAGACTCTCCTGAGAGACTAGAGGTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | GGCCCTGGCGACCACCCACAGGCAGAGAGAACCTGTACAGCGGGGCCAGGAGACTTTATCAGAGGGATCTaGGTGCTCCAATTGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: GPGDHPQAERTCTAGPGDFIRGI*VLQLLK Trigger: CTTCAACAATTGGAGCACCAAGATCCCTCTGATAAA...GTCTCCTGGCCCCGCTGTACAGGTTCTCTCTGCCTGTGGGTGGTCGCCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | TCAAAACAAACCAGCCTGCCAGCCTCAGAGGAGGCCAGCTCAGTTCAAAGGCAACTCCCCACCATGATCTaGTGCTCCTTTCCCGGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SKQTSLPASEEASSVQRQLPTMI*CSFPGP Trigger: TGGCCCGGGAAAGGAGCACAAGATCATGGTGGGGAG...TTGCCTTTGAACTGAGCTGGCCTCCTCTGAGGCTGGCAGGCTGGTTTGTTTTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | TCAGAGGCTCTGACACACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGATGAAGACCTCCTaGCCTCCTTCAGACCAGCGG | + |
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Preference number: 5 (lower is better) Translates to: SEALTHTAASKQTSLPASEMKTS*PPSDQR Trigger: CCGCTGGTCTGAAGGAGGCAAGGAGGTCTTCATCTC...TGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGTGTGTCAGAGCCTCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | ACACAGCAGCCTCAAAACAAACCAGCCTGCCAGCCTCAGAGGAGGCCAGCTCAGTTGGTGCTCCAATTGTaGAAGGACCCAGAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: TQQPQNKPACQPQRRPAQLVLQL*KDPEMK Trigger: CTTCATCTCTGGGTCCTTCAACAATTGGAGCACCAA...CTGAGCTGGCCTCCTCTGAGGCTGGCAGGCTGGTTTGTTTTGAGGCTGCTGTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTTTCAGCTCGAGCAGCTTaGGCTCCGTGGCGCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: ARRLPVTFLSYAYIWFCVSARAA*APWRSP Trigger: CGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGA...AACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | AATGCTCTGATAAAGAAAAACCGTAAACAGGCTCACACAGCCAATATACAGGACTTGTCCCCGGGGAGCTaGGAGTCGGGCAGGCTGAAG | + |
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Preference number: 5 (lower is better) Translates to: NALIKKNRKQAHTANIQDLSPGS*ESGRLK Trigger: CTTCAGCCTGCCCGACTCCAAGCTCCCCGGGGACAA...GTCCTGTATATTGGCTGTGTGAGCCTGTTTACGGTTTTTCTTTATCAGAGCATT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | CCCAACAAAGATCCTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCCAGGGTACAAACTCTTaGTCCCCGGGGAGCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: PNKDPKSLLFSHFRKRSFQGTNS*SPGSLE Trigger: CTCCAAGCTCCCCGGGGACAAAGAGTTTGTACCCTG...GAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAGGATCTTTGTTGGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | GGCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTATCTTGGTGCTCCAATaGTTGAAGGACCCAGAGATG | + |
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Preference number: 5 (lower is better) Translates to: GQETSGNLSLICIYMVLCILVLQ*LKDPEM Trigger: CATCTCTGGGTCCTTCAACAATTGGAGCACCAAGAT...ACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTTAAACACATACATTTCTaGACCGTAAGGCCCAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: ARRLPVTFLSYAYIWFCVKHIHF*TVRPRG Trigger: CCCCCTGGGCCTTACGGTCAAGAAATGTATGTGTTT...AACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR CAA 90 bp | AAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTCCAGGATGGGTGGGGATTaGAATCTCTCCTCAGATCGA | + |
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Preference number: 5 (lower is better) Translates to: KSLLFSHFRKRSFWDAHSRMGGD*NLSSDR Trigger: TCGATCTGAGGAGAGATTCAAATCCCCACCCATCCT...GGAATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000045743.13 |
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| CDS-3UTR CAA 90 bp | GCCAGGAGACTTCCGGTAACCTTTCTCTCATATGCATATATATGGTTTTGTGTTTTGGTGCTCCAATTGTaGAAGGACCCAGAGATGAAG | + |
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Preference number: 5 (lower is better) Translates to: ARRLPVTFLSYAYIWFCVLVLQL*KDPEMK Trigger: CTTCATCTCTGGGTCCTTCAACAATTGGAGCACCAA...AACACAAAACCATATATATGCATATGAGAGAAAGGTTACCGGAAGTCTCCTGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS-3UTR CAA 90 bp | CTAAGAGTTTGCTATTCTCTCACTTTAGAAAAAGAAGCTTCTGGGATGCCCATTTTTATCAGAGGGATCTaGGTGCTCCAATTGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LRVCYSLTLEKEASGMPIFIRGI*VLQLLK Trigger: CTTCAACAATTGGAGCACCAAGATCCCTCTGATAAA...AATGGGCATCCCAGAAGCTTCTTTTTCTAAAGTGAGAGAATAGCAAACTCTTAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS CCA 72 bp | CCGGGCCATGGCCGCCGCCCTCAGCTCGAGCAGCTTTaGCTCCGTGGCGCTCCCCGGACACCCGCTCGCTGG | + |
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Preference number: 6 (lower is better) Translates to: PGHGRRPQLEQL*LRGAPRTPARW Trigger: CCAGCGAGCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGAGGGCGGCGGCCATGGCCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS CAA 72 bp | CCCGGGCCATGGCCGCCGCCCTCAGCTCGAGCAGCTTaGGCTCCGTGGCGCTCCCCGGACACCCGCTCGCTG | + |
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Preference number: 6 (lower is better) Translates to: PGPWPPPSARAA*APWRSPDTRSL Trigger: CAGCGAGCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGAGGGCGGCGGCCATGGCCCGGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS CCA 72 bp | TGGCCGCCGCCCTCAGCTCGAGCAGCTTTGGCTCCGTaGCGCTCCCCGGACACCCGCTCGCTGGTAGTGTTT | + |
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Preference number: 6 (lower is better) Translates to: WPPPSARAALAP*RSPDTRSLVVF Trigger: AAACACTACCAGCGAGCGGGTGTCCGGGGAGCGCCACGGAGCCAAAGCTGCTCGAGCTGAGGGCGGCGGCCA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000045743.13 ENSMUST00000130924.8 ENSMUST00000143927.8 |
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| CDS GCA 72 bp | CCTCCTTCAGACCAGCGGATAACGGTGGGCCGGGCCTaGTGGGCGGGCTTCACAGAATCATCCAAATCCTGC | + |
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Preference number: 6 (lower is better) Translates to: PPSDQRITVGRA*WAGFTESSKSC Trigger: GCAGGATTTGGATGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGTTATCCGCTGGTCTGAAGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS CCA 72 bp | CCTTCAGACCAGCGGATAACGGTGGGCCGGGCCTGCTaGGCGGGCTTCACAGAATCATCCAAATCCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: PSDQRITVGRAC*AGFTESSKSCC Trigger: GCAGCAGGATTTGGATGATTCTGTGAAGCCCGCCCAGCAGGCCCGGCCCACCGTTATCCGCTGGTCTGAAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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| CDS CAA 90 bp | GGCTTCACAGAATCATCCAAATCCTGCTGCCAGGGTACAAACTCTTaGTCCCCGGGGAGCTTGGAGTCGGGCAGGCTGAAGACGCTGGGG | + |
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Preference number: 6 (lower is better) Translates to: GFTESSKSCCQGTNS*SPGSLESGRLKTLG Trigger: CCCCAGCGTCTTCAGCCTGCCCGACTCCAAGCTCCCCGGGGACAAAGAGTTTGTACCCTGGCAGCAGGATTTGGATGATTCTGTGAAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000045743.13 ENSMUST00000143927.8 |
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