Pregenerated sensors for PRKAB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029513Ensembl transcript IDs: ENSMUST00000031486.14, ENSMUST00000111999.8, ENSMUST00000133098.9, ENSMUST00000148208.2
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATaGCTGCCTCTCATTCCCTCATATCGGCTTGTAGAGGAGGGTGGT | + |
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Preference number: 1 (lower is better) Translates to: HAHGEPSTACHPCGP*LPLIPSYRLVEEGG Trigger: ACCACCCTCCTCTACAAGCCGATATGAGGGAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR CCA 90 bp | AGGCCAGCGGCCTCACGGAGGCAAACGATGATGAGGACTTCTGTGTaGCTTCTGTCCCTGCTCCCCAGGTTCGGGTCTGGCTGTAGACAT | + |
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Preference number: 1 (lower is better) Translates to: RPAASRRQTMMRTSV*LLSLLPRFGSGCRH Trigger: ATGTCTACAGCCAGACCCGAACCTGGGGAGCAGGGACAGAAGCCACACAGAAGTCCTCATCATCGTTTGCCTCCGTGAGGCCGCTGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR CCA 90 bp | GGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTaGTCCATGGCTGCCTCTCATTCCCTCATATCGGCTTGTAGAGGA | + |
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Preference number: 1 (lower is better) Translates to: GCACTRRAQHRLPSL*SMAASHSLISACRG Trigger: TCCTCTACAAGCCGATATGAGGGAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR TCA 90 bp | AACCACCGTGATACTCTCTGCTCACTAGAGATGCAGGTCCCCAGCTaGGGAGCACATGCTGGAACTAAAAGGAGGGTGGGTGCTTCGACC | + |
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Preference number: 1 (lower is better) Translates to: NHRDTLCSLEMQVPS*GAHAGTKRRVGAST Trigger: GGTCGAAGCACCCACCCTCCTTTTAGTTCCAGCATGTGCTCCTCAGCTGGGGACCTGCATCTCTAGTGAGCAGAGAGTATCACGGTGGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 90 bp | GGTACCCAAAACTCAGGCTTAACCAAATACTGTGCCTGCCTCTGCTaGCAGGTGACAGGACCTTGTCCCAATGGGCACAGCTGTGATGTC | + |
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Preference number: 1 (lower is better) Translates to: GTQNSGLTKYCACLC*QVTGPCPNGHSCDV Trigger: GACATCACAGCTGTGCCCATTGGGACAAGGTCCTGTCACCTGTCAGCAGAGGCAGGCACAGTATTTGGTTAAGCCTGAGTTTTGGGTACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 90 bp | CCTCTGCTGACAGGTGACAGGACCTTGTCCCAATGGGCACAGCTGTaGTGTCACCATGGAAACCAGATGGAGTATAAGATAGGTTCATTC | + |
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Preference number: 1 (lower is better) Translates to: PLLTGDRTLSQWAQL*CHHGNQMEYKIGSF Trigger: GAATGAACCTATCTTATACTCCATCTGGTTTCCATGGTGACATCACAGCTGTGCCCATTGGGACAAGGTCCTGTCACCTGTCAGCAGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR GCA 90 bp | CTTGTAGAGGAGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTaGACTGAGCACCATCACTCCATCCTTGATGGAGAGTGCATAGAG | + |
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Preference number: 1 (lower is better) Translates to: LVEEGGDILFLVPVC*TEHHHSILDGECIE Trigger: CTCTATGCACTCTCCATCAAGGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACCCTCCTCTACAAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| 3UTR TCA 90 bp | GGAAATCAGACACTGAATTTCCATAGGATCTACAATCTACTGCTTTaGTTCAGAAGGACAGGCAAGACCCAACACTGCTTTCCTCCCCAG | + |
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Preference number: 1 (lower is better) Translates to: GNQTLNFHRIYNLLL*FRRTGKTQHCFPPQ Trigger: CTGGGGAGGAAAGCAGTGTTGGGTCTTGCCTGTCCTTCTGAATCAAAGCAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 90 bp | CAGTGTCGGGAAACGATTGCAAAGCTGCATCCGGAAATCAGACACTaGATTTCCATAGGATCTACAATCTACTGCTTTGATTCAGAAGGA | + |
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Preference number: 1 (lower is better) Translates to: QCRETIAKLHPEIRH*ISIGSTIYCFDSEG Trigger: TCCTTCTGAATCAAAGCAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTTGCAATCGTTTCCCGACACTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | TTTCCTCCCCAGCCAGGCCTCACCAGGGACAGGCCAGCGGCCTCACGGAGGCAACAAAGCCTCGTGCACTaGGATGCTGGGGCTGCAGGC | + |
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Preference number: 2 (lower is better) Translates to: FPPQPGLTRDRPAASRRQQSLVH*DAGAAG Trigger: GCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTTTG...TTGCCTCCGTGAGGCCGCTGGCCTGTCCCTGGTGAGGCCTGGCTGGGGAGGAAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCTGCCTCTCATTCCCTGAGCCCAGCACCGCCTaGCATCCCTGTGGTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: ESPAPPAIPVVHGCLSFPEPSTA*HPCGPW Trigger: CCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTC...AGGGAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR-3UTR CCA 90 bp | AGCACAAAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCCGCCTGCCATCCCTGTaGTCCATGGCTGCCTCTCAT | + |
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Preference number: 2 (lower is better) Translates to: STKPRALRCWGCRRPCHPRLPSL*SMAASH Trigger: ATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCG...GGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTTTGTGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| 3UTR-3UTR GCA 90 bp | GTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTATGAGCCCAGCACCGCCTaGCATCCCTGTGGTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: VHCDAGAAGGRAIPIFGYEPSTA*HPCGPW Trigger: CCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTC...ATAGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCAC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| 3UTR-3UTR TCA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGACCGGTGTGTTGCACTaGGCACCATCACTCCATCCT | + |
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Preference number: 2 (lower is better) Translates to: PRALRCWGCRRPCHPYFWTGVLH*APSLHP Trigger: AGGATGGAGTGATGGTGCTCAGTGCAACACACCGGT...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTGGCTGTAGACATCTCTaGCCAGCAGAGGGGATGATG | + |
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Preference number: 2 (lower is better) Translates to: KPRALRCWGCRRPCHPYFGCRHL*PAEGMM Trigger: CATCATCCCCTCTGCTGGCCAGAGATGTCTACAGCC...AAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CCA 90 bp | AAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTATGAGGACTTCTGTGTaGCTTCTGTCCCTGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: KPRALRCWGCRRPCHPYFMRTSV*LLSLLP Trigger: GGGGAGCAGGGACAGAAGCCACACAGAAGTCCTCAT...AAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | GTGAGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTCCCTATTTTTGGCTATaGCTGGACAGACCTTCAAGG | + |
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Preference number: 2 (lower is better) Translates to: VSEDVHAHGEPSTACHPCPYFWL*LDRPSR Trigger: CCTTGAAGGTCTGTCCAGGCATAGCCAAAAATAGGG...ACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACTCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| 3UTR-3UTR GCA 90 bp | ACAGGACCTTGTCCCAATGGGCACAGCTGTGATGTCACCATGGAAACCAGATGGTGTGGCTTCTGTCCCTaGTCCCCAGGTTCGGGTCTG | + |
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Preference number: 2 (lower is better) Translates to: TGPCPNGHSCDVTMETRWCGFCP*SPGSGL Trigger: CAGACCCGAACCTGGGGAGCAGGGACAGAAGCCACA...CCATCTGGTTTCCATGGTGACATCACAGCTGTGCCCATTGGGACAAGGTCCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGATCCTTGATGGAGAGTaGATAGAGGTGGTTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: PRALRCWGCRRPCHPYFWILDGE*IEVVQH Trigger: ATGCTGAACCACCTCTATGCACTCTCCATCAAGGAT...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR-3UTR GCA 90 bp | ATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATTGCCTTCTGCGATGCTGGGGCTaGAGGCGGCCGTGCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: IAECSHMISSLILVTYCLLRCWG*RRPCHP Trigger: GGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAG...AAGGCAATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CCA 90 bp | AACGATTGCAAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACCGTGCACTGCGATGCTaGGGCTGCAGGCGGCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: NDCKAASGNQTLNFHRIYRALRC*GCRRPC Trigger: GCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACG...GTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTTGCAATCGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CCA 90 bp | ACAGGACCTTGTCCCAATGGGCACAGCTGTGATGTCACCATGGAAACCAGATGGATGAGGACTTCTGTGTaGCTTCTGTCCCTGCTCCCC | + |
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Preference number: 2 (lower is better) Translates to: TGPCPNGHSCDVTMETRWMRTSV*LLSLLP Trigger: GGGGAGCAGGGACAGAAGCCACACAGAAGTCCTCAT...CCATCTGGTTTCCATGGTGACATCACAGCTGTGCCCATTGGGACAAGGTCCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATGAGCCCAGCACCGCCTaGCATCCCTGTGGTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: VIIAECSHMISSLILVTYEPSTA*HPCGPW Trigger: CCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTC...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGTACCCAAAACTCAGGCTTAACCAAATACTGTGCCTGCCTCTGCTGACAGTGTCGGGAAACGATTaGAAAGCTGCATCCGGAAAT | + |
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Preference number: 2 (lower is better) Translates to: KRYPKLRLNQILCLPLLTVSGND*KAASGN Trigger: ATTTCCGGATGCAGCTTTGCAATCGTTTCCCGACAC...TGTCAGCAGAGGCAGGCACAGTATTTGGTTAAGCCTGAGTTTTGGGTACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTATCCTTGATGGAGAGTaGATAGAGGTGGTTCAGCAT | + |
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Preference number: 2 (lower is better) Translates to: RVVTYFFLYRCVALSTITILDGE*IEVVQH Trigger: ATGCTGAACCACCTCTATGCACTCTCCATCAAGGAT...AGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| 3UTR-3UTR CCA 90 bp | CGACCAGGTTGCCATGGTAATGTGGCCAACATTGCAACTGAAATAAGGTGTAGCATGGAGAAATGGCAGTaGGGTTTGAAGTCTGTCTTG | + |
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Preference number: 2 (lower is better) Translates to: RPGCHGNVANIATEIRCSMEKWQ*GLKSVL Trigger: CAAGACAGACTTCAAACCCCACTGCCATTTCTCCAT...GCTACACCTTATTTCAGTTGCAATGTTGGCCACATTACCATGGCAACCTGGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR CAA 90 bp | TCATCTGGCTTAATGGAGAAATGGCAGTGGGGTTTGAAGTCTGTCTaGAGAGTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTC | + |
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Preference number: 2 (lower is better) Translates to: SSGLMEKWQWGLKSV*RVIIAECSHMISSL Trigger: GAGACTAGAGATCATGTGACTACACTCAGCAATAATCACTCTCAAGACAGACTTCAAACCCCACTGCCATTTCTCCATTAAGCCAGATGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR GCA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATGGATCTACAATCTACTaGTTTGATTCAGAAGGACAG | + |
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Preference number: 2 (lower is better) Translates to: VIIAECSHMISSLILVTYGSTIY*FDSEGQ Trigger: CTGTCCTTCTGAATCAAAGCAGTAGATTGTAGATCC...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CAA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGTTCAGCATGACGTGGTaGGGCTCCGGAAGCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: PRALRCWGCRRPCHPYFWFSMTW*GSGSSA Trigger: AGCACTGCTTCCGGAGCCCAACCACGTCATGCTGAA...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR CCA 72 bp | TGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTaGTCCATGGCTGCCTCTCATTCCCTCATATCGGCT | + |
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Preference number: 3 (lower is better) Translates to: CTRRAQHRLPSL*SMAASHSLISA Trigger: AGCCGATATGAGGGAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR CCA 72 bp | GGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATaGCTGCCTCTCATTCCCTCATATCGGCTTGTAGAG | + |
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Preference number: 3 (lower is better) Translates to: GEPSTACHPCGP*LPLIPSYRLVE Trigger: CTCTACAAGCCGATATGAGGGAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000133098.9 |
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| 3UTR CCA 72 bp | CTGCTCCCCAGGTTCGGGTCTGGCTGTAGACATCTCTaGCCAGCAGAGGGGATGATGCGTAGAGCACAAAGC | + |
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Preference number: 3 (lower is better) Translates to: LLPRFGSGCRHL*PAEGMMRRAQS Trigger: GCTTTGTGCTCTACGCATCATCCCCTCTGCTGGCCAGAGATGTCTACAGCCAGACCCGAACCTGGGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CAA 90 bp | GTGAGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGTGCCATCCCTATTTTaGGCTATGCCTGGACAGACC | + |
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Preference number: 3 (lower is better) Translates to: VSEDVHAHGEPSTACHPCVPSLF*AMPGQT Trigger: GGTCTGTCCAGGCATAGCCAAAAATAGGGATGGCAC...ACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACTCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| 3UTR-3UTR CAA 90 bp | GTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTATGTGCCATCCCTATTTTaGGCTATGCCTGGACAGACC | + |
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Preference number: 3 (lower is better) Translates to: VHCDAGAAGGRAIPIFGYVPSLF*AMPGQT Trigger: GGTCTGTCCAGGCATAGCCAAAAATAGGGATGGCAC...ATAGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| 3UTR CCA 72 bp | CCAGCTGAGGAGCACATGCTGGAACTAAAAGGAGGGTaGGTGCTTCGACCAGGTTGCCATGGTAATGTGGCC | + |
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Preference number: 3 (lower is better) Translates to: PAEEHMLELKGG*VLRPGCHGNVA Trigger: GGCCACATTACCATGGCAACCTGGTCGAAGCACCCACCCTCCTTTTAGTTCCAGCATGTGCTCCTCAGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 72 bp | GATACTCTCTGCTCACTAGAGATGCAGGTCCCCAGCTaGGGAGCACATGCTGGAACTAAAAGGAGGGTGGGT | + |
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Preference number: 3 (lower is better) Translates to: DTLCSLEMQVPS*GAHAGTKRRVG Trigger: ACCCACCCTCCTTTTAGTTCCAGCATGTGCTCCTCAGCTGGGGACCTGCATCTCTAGTGAGCAGAGAGTATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 72 bp | AACTCAGGCTTAACCAAATACTGTGCCTGCCTCTGCTaGCAGGTGACAGGACCTTGTCCCAATGGGCACAGC | + |
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Preference number: 3 (lower is better) Translates to: NSGLTKYCACLC*QVTGPCPNGHS Trigger: GCTGTGCCCATTGGGACAAGGTCCTGTCACCTGTCAGCAGAGGCAGGCACAGTATTTGGTTAAGCCTGAGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCTTCAGCATGACGTGGTaGGGCTCCGGAAGCAGTGCT | + |
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Preference number: 3 (lower is better) Translates to: GGDILFLVPVCCTEHHHSFSMTW*GSGSSA Trigger: AGCACTGCTTCCGGAGCCCAACCACGTCATGCTGAA...GGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| 3UTR GCA 72 bp | AAAAGGTACCCAAAACTCAGGCTTAACCAAATACTGTaGCTGCCTCTGCTGACAGGTGACAGGACCTTGTCC | + |
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Preference number: 3 (lower is better) Translates to: KRYPKLRLNQIL*LPLLTGDRTLS Trigger: GGACAAGGTCCTGTCACCTGTCAGCAGAGGCAGGCACAGTATTTGGTTAAGCCTGAGTTTTGGGTACCTTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR GCA 72 bp | GAGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTaGACTGAGCACCATCACTCCATCCTTGATGGAGAG | + |
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Preference number: 3 (lower is better) Translates to: EGGDILFLVPVC*TEHHHSILDGE Trigger: CTCTCCATCAAGGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACCCTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGGACCTTGTCCCAATGGGCACAGCTGTGATGTCACCATGGAAACCAGATGGCTACAATCTACTGCTTaGATTCAGAAGGACAGGCAA | + |
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Preference number: 3 (lower is better) Translates to: TGPCPNGHSCDVTMETRWLQSTA*IQKDRQ Trigger: TTGCCTGTCCTTCTGAATCAAAGCAGTAGATTGTAG...CCATCTGGTTTCCATGGTGACATCACAGCTGTGCCCATTGGGACAAGGTCCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 72 bp | ACACTGAATTTCCATAGGATCTACAATCTACTGCTTTaGTTCAGAAGGACAGGCAAGACCCAACACTGCTTT | + |
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Preference number: 3 (lower is better) Translates to: TLNFHRIYNLLL*FRRTGKTQHCF Trigger: AAAGCAGTGTTGGGTCTTGCCTGTCCTTCTGAATCAAAGCAGTAGATTGTAGATCCTATGGAAATTCAGTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| 3UTR TCA 72 bp | GAAACGATTGCAAAGCTGCATCCGGAAATCAGACACTaGATTTCCATAGGATCTACAATCTACTGCTTTGAT | + |
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Preference number: 3 (lower is better) Translates to: ETIAKLHPEIRH*ISIGSTIYCFD Trigger: ATCAAAGCAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTTGCAATCGTTTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | AGCACAAAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCGACCTGCAGCAGGTGTaGCGGGAGGATGGGCGGGGC | + |
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Preference number: 4 (lower is better) Translates to: STKPRALRCWGCRRPCHPDLQQV*REDGRG Trigger: GCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTC...GGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTTTGTGCT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| CDS-3UTR CCA 90 bp | AAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: KPRALRCWGCRRPCHPYFSIETR*AGPGRG Trigger: CCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGA...AAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTGACCTGCAGCAGGTGTaGCGGGAGGATGGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KASCTAMLGLQAAVPSLFDLQQV*REDGRG Trigger: GCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTC...AAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTTT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR CCA 90 bp | GTGTGGCTTCTGTCCCTGCTCCCCAGGTTCGGGTCTGGCTGTAGACATCTCTGGTCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: VWLLSLLPRFGSGCRHLWSIETR*AGPGRG Trigger: CCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGA...CCAGAGATGTCTACAGCCAGACCCGAACCTGGGGAGCAGGGACAGAAGCCACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTACGGTGGGCCGGGCCTaGGCGGGGGCTTTATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VSEDVHAHGEPSTACHPCTVGRA*AGALSF Trigger: GAATGATAAAGCCCCCGCCCAGGCCCGGCCCACCGT...ACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACTCAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR CCA 90 bp | TCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTCTGGTGGTAGGGTCCTaGGGGCGAGCTGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: SCTAMLGLQAAVPSLFLALVVGS*GRAGQL Trigger: GAGCTGTCCAGCTCGCCCCCAGGACCCTACCACCAG...AGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR CCA 90 bp | AAAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTCTGGTGGTAGGGTCCTaGGGGCGAGCTGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KASCTAMLGLQAAVPSLFLVVGS*GRAGQL Trigger: GAGCTGTCCAGCTCGCCCCCAGGACCCTACCACCAG...AAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR TCA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTTCAGGGCTGTCCATaGGGATCTTGGGCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: PRALRCWGCRRPCHPYFWLQGCP*GSWACP Trigger: GGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAG...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCGCTTCCAGGTCGTGCTaGCAGGCCAGGAATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MCMHTESPAPPAIPVVHGASRSC*QARNSS Trigger: AGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGC...GCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR GCA 90 bp | ATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCTTCGCTTCCAGGTCGTaGTGCCAGGCCAGGAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: MCMHTESPAPPAIPVVHGFASRS*CQARNS Trigger: GGAATTCCTGGCCTGGCAGCACGACCTGGAAGCGAA...GCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR TCA 90 bp | GTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTATCTTCAGGGCTGTCCATaGGGATCTTGGGCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: VHCDAGAAGGRAIPIFGYLQGCP*GSWACP Trigger: GGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAG...ATAGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR GCA 90 bp | AAGCCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTGCTTCCAGGTCGTGCTaGCAGGCCAGGAATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: KPRALRCWGCRRPCHPYFASRSC*QARNSS Trigger: AGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGC...AAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGGCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR GCA 90 bp | ACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCTGCCTCTCATTCTTGTTCAAGATGACCTaGAGCAGGTGTGGCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: TESPAPPAIPVVHGCLSFLFKMT*SRCGGR Trigger: CCTCCCGCCACACCTGCTGCAGGTCATCTTGAACAA...GAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR GCA 90 bp | TGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCTGCCTCTCTTGTACCGGTGTGTTaGACTGAGCACCATCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CTRRAQHRLPSLWSMAASLVPVC*TEHHHS Trigger: GGAGTGATGGTGCTCAGTGCAACACACCGGTACAAG...AGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR TCA 90 bp | TCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTACCGGTGTGTTGCACTaGGCACCATCACTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: SCTAMLGLQAAVPSLFLATGVLH*APSLHP Trigger: AGGATGGAGTGATGGTGCTCAGTGCAACACACCGGT...AGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR GCA 90 bp | ATGACGTGGTTGGGCTCCGGAAGCAGTGCTGGGTCACAAGAGATGCCCGTGTCCGCTTCCAGGTCGTGCTaGCAGGCCAGGAATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: MTWLGSGSSAGSQEMPVSASRSC*QARNSS Trigger: AGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGC...GGACACGGGCATCTCTTGTGACCCAGCACTGCTTCCGGAGCCCAACCACGTCAT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR TCA 90 bp | GTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCCATCACTCCATCCTTaGTGGAGAGTGCATAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VRMCMHTESPAPPAIPVVPSLHP*WRVHRG Trigger: ACCTCTATGCACTCTCCATCAAGGATGGAGTGATGG...GACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | GGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCCTCCGCGGCGTCTTGTaGCCCGCCTGCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GDILFLVPVCCTEHHHSILRGVL*PACRSS Trigger: GCTGGAGCGGCAGGCGGGCCACAAGACGCCGCGGAG...GATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | GTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCCCTCCGCGGCGTCTTGTaGCCCGCCTGCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VTYFFLYRCVALSTITPSLRGVL*PACRSS Trigger: GCTGGAGCGGCAGGCGGGCCACAAGACGCCGCGGAG...GGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | TGTTGCACTGAGCACCATCACTCCATCCTTGATGGAGAGTGCATAGAGGTGGTTGACCTGCAGCAGGTGTaGCGGGAGGATGGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: CCTEHHHSILDGECIEVVDLQQV*REDGRG Trigger: GCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTC...AACCACCTCTATGCACTCTCCATCAAGGATGGAGTGATGGTGCTCAGTGCAACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | CTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCCTTGATGGATCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LFLVPVCCTEHHHSILDGSIETR*AGPGRG Trigger: CCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGA...TCCATCAAGGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | GGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCTCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GDILFLVPVCCTEHHHSISIETR*AGPGRG Trigger: CCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGA...GATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTGACCTGCAGCAGGTGTaGCGGGAGGATGGGCGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RVVTYFFLYRCVALSTITDLQQV*REDGRG Trigger: GCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTC...AGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR TCA 90 bp | CTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCCTTGATGGAGAGTGCCTTCAGGGCTGTCCATaGGGATCTTGGGCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: LVPVCCTEHHHSILDGECLQGCP*GSWACP Trigger: GGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAG...GCACTCTCCATCAAGGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR GCA 90 bp | ACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCCATGGCTGCCTCTCATTCATCCTTGATGGAGAGTaGATAGAGGTGGTTCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TESPAPPAIPVVHGCLSFILDGE*IEVVQH Trigger: ATGCTGAACCACCTCTATGCACTCTCCATCAAGGAT...GAATGAGAGGCAGCCATGGACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | GTGAGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTTTGATCTCTTCGGAGTaGAAGATGTCGGCGTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: VSEDVHAHGEPSTACHPCLISSE*KMSASS Trigger: TGAAGACGCCGACATCTTCCACTCCGAAGAGATCAA...ACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACTCAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| CDS-3UTR CCA 90 bp | GTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGCTATCTGTGCCAAGCTGGCTaGTTACTATTGGCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: VHCDAGAAGGRAIPIFGYLCQAG*LLLAQK Trigger: CTTCTGAGCCAATAGTAACCAGCCAGCTTGGCACAG...ATAGCCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | AACGATTGCAAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACCTCCGCGGCGTCTTGTaGCCCGCCTGCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: NDCKAASGNQTLNFHRIYLRGVL*PACRSS Trigger: GCTGGAGCGGCAGGCGGGCCACAAGACGCCGCGGAG...GTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTTGCAATCGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGACATCGGAGCACTTTTaGGAATCCACCATTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRALRCWGCRRPCHPYFWTSEHF*ESTIKA Trigger: TGCTTTAATGGTGGATTCCCAAAAGTGCTCCGATGT...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | GTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCACATCGGAGCACTTTTaGGAATCCACCATTAAAGCA | + |
|
Preference number: 4 (lower is better) Translates to: VRMCMHTESPAPPAIPVVTSEHF*ESTIKA Trigger: TGCTTTAATGGTGGATTCCCAAAAGTGCTCCGATGT...GACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | TATCGGCTTGTAGAGGAGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCCTGGTGGTAGGGTCCTaGGGGCGAGCTGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YRLVEEGGDILFLVPVCCLVVGS*GRAGQL Trigger: GAGCTGTCCAGCTCGCCCCCAGGACCCTACCACCAG...GCAACACACCGGTACAAGAAAAAGTATGTCACCACCCTCCTCTACAAGCCGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR TCA 90 bp | CGGCTTGTAGAGGAGGGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTCTTCAGGGCTGTCCATaGGGATCTTGGGCCTGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: RLVEEGGDILFLVPVCCTLQGCP*GSWACP Trigger: GGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAG...AGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACCCTCCTCTACAAGCCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR CCA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATCTCCGCGGCGTCTTGTaGCCCGCCTGCCGCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: VIIAECSHMISSLILVTYLRGVL*PACRSS Trigger: GCTGGAGCGGCAGGCGGGCCACAAGACGCCGCGGAG...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTACCCAAAACTCAGGCTTAACCAAATACTGTGCCTGCCTCTGCTGACACTGGTGGTAGGGTCCTaGGGGCGAGCTGGACAGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KRYPKLRLNQILCLPLLTLVVGS*GRAGQL Trigger: GAGCTGTCCAGCTCGCCCCCAGGACCCTACCACCAG...TGTCAGCAGAGGCAGGCACAGTATTTGGTTAAGCCTGAGTTTTGGGTACCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | CCTCGTGCACTGCGATGCTGGGGCTGCAGGCGGCCGTGCCATCCCTATTTTTGGTTTGAACCTCTCTTCTaGTTTAGACATGTAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PRALRCWGCRRPCHPYFWFEPLF*FRHVRL Trigger: GAGCCTTACATGTCTAAACCAGAAGAGAGGTTCAAA...CCAAAAATAGGGATGGCACGGCCGCCTGCAGCCCCAGCATCGCAGTGCACGAGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
||
| CDS-3UTR CCA 90 bp | ATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCCTTGATACGGTGGGCCGGGCCTaGGCGGGGGCTTTATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: ILFLVPVCCTEHHHSILDTVGRA*AGALSF Trigger: GAATGATAAAGCCCCCGCCCAGGCCCGGCCCACCGT...ATCAAGGATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR TCA 90 bp | CTTATTGCCTTACGTAGGAGTGGCCAGCCAGCCACTCTGGTTAAAGAGGTCTTATGTCCTTGTTCAAGATaGCCTGCAGCAGGTGTGGCG | + |
|
Preference number: 4 (lower is better) Translates to: LIALRRSGQPATLVKEVLCPCSR*PAAGVA Trigger: CGCCACACCTGCTGCAGGTCATCTTGAACAAGGACA...TAAGACCTCTTTAACCAGAGTGGCTGGCTGGCCACTCCTACGTAAGGCAATAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | ACGTGGTTGGGCTCCGGAAGCAGTGCTGGGTCACAAGAGATGCCCGTGTCCTTGTTTGAACCTCTCTTCTaGTTTAGACATGTAAGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: TWLGSGSSAGSQEMPVSLFEPLF*FRHVRL Trigger: GAGCCTTACATGTCTAAACCAGAAGAGAGGTTCAAA...CAAGGACACGGGCATCTCTTGTGACCCAGCACTGCTTCCGGAGCCCAACCACGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
||
| CDS-3UTR CCA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATACGGTGGGCCGGGCCTaGGCGGGGGCTTTATCATTC | + |
|
Preference number: 4 (lower is better) Translates to: VIIAECSHMISSLILVTYTVGRA*AGALSF Trigger: GAATGATAAAGCCCCCGCCCAGGCCCGGCCCACCGT...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR TCA 90 bp | CTTATTGCCTTACGTAGGAGTGGCCAGCCAGCCACTCTGGTTAAAGAGGTCTTACCATCACTCCATCCTTaGTGGAGAGTGCATAGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIALRRSGQPATLVKEVLPSLHP*WRVHRG Trigger: ACCTCTATGCACTCTCCATCAAGGATGGAGTGATGG...TAAGACCTCTTTAACCAGAGTGGCTGGCTGGCCACTCCTACGTAAGGCAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | CTTATTGCCTTACGTAGGAGTGGCCAGCCAGCCACTCTGGTTAAAGAGGTCTTACTGTGCCAAGCTGGCTaGTTACTATTGGCTCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: LIALRRSGQPATLVKEVLLCQAG*LLLAQK Trigger: CTTCTGAGCCAATAGTAACCAGCCAGCTTGGCACAG...TAAGACCTCTTTAACCAGAGTGGCTGGCTGGCCACTCCTACGTAAGGCAATAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR CCA 90 bp | ACAGGACCTTGTCCCAATGGGCACAGCTGTGATGTCACCATGGAAACCAGATGGTTAACTGTGCCAAGCTaGCTGGTTACTATTGGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TGPCPNGHSCDVTMETRWLTVPS*LVTIGS Trigger: TGAGCCAATAGTAACCAGCCAGCTTGGCACAGTTAA...CCATCTGGTTTCCATGGTGACATCACAGCTGTGCCCATTGGGACAAGGTCCTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR GCA 90 bp | AACGATTGCAAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACGCTTCCAGGTCGTGCTaGCAGGCCAGGAATTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: NDCKAASGNQTLNFHRIYASRSC*QARNSS Trigger: AGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGC...GTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTTGCAATCGTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
||
| CDS-3UTR TCA 90 bp | AAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACAATCTACTGACCGGTGTGTTGCACTaGGCACCATCACTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: KAASGNQTLNFHRIYNLLTGVLH*APSLHP Trigger: AGGATGGAGTGATGGTGCTCAGTGCAACACACCGGT...CAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR GCA 90 bp | AAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACAATCTACTGTTGTTCAAGATGACCTaGAGCAGGTGTGGCGGGAGG | + |
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Preference number: 4 (lower is better) Translates to: KAASGNQTLNFHRIYNLLLFKMT*SRCGGR Trigger: CCTCCCGCCACACCTGCTGCAGGTCATCTTGAACAA...CAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR GCA 90 bp | CGACCAGGTTGCCATGGTAATGTGGCCAACATTGCAACTGAAATAAGGTGTAGCATCCTTGATGGAGAGTaGATAGAGGTGGTTCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: RPGCHGNVANIATEIRCSILDGE*IEVVQH Trigger: ATGCTGAACCACCTCTATGCACTCTCCATCAAGGAT...GCTACACCTTATTTCAGTTGCAATGTTGGCCACATTACCATGGCAACCTGGTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR GCA 90 bp | ATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATTGCCTTCTTGTACCGGTGTGTTaGACTGAGCACCATCACTCC | + |
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Preference number: 4 (lower is better) Translates to: IAECSHMISSLILVTYCLLVPVC*TEHHHS Trigger: GGAGTGATGGTGCTCAGTGCAACACACCGGTACAAG...AAGGCAATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAAT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | GGTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCTTTGAACCTCTCTTCTaGTTTAGACATGTAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: GGDILFLVPVCCTEHHHSFEPLF*FRHVRL Trigger: GAGCCTTACATGTCTAAACCAGAAGAGAGGTTCAAA...GGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCACC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR CCA 90 bp | ATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATTGCCTTTTAACTGTGCCAAGCTaGCTGGTTACTATTGGCTCA | + |
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Preference number: 4 (lower is better) Translates to: IAECSHMISSLILVTYCLLTVPS*LVTIGS Trigger: TGAGCCAATAGTAACCAGCCAGCTTGGCACAGTTAA...AAGGCAATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CCA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATTTTGAACCTCTCTTCTaGTTTAGACATGTAAGGCTC | + |
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Preference number: 4 (lower is better) Translates to: VIIAECSHMISSLILVTYFEPLF*FRHVRL Trigger: GAGCCTTACATGTCTAAACCAGAAGAGAGGTTCAAA...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS GCA 90 bp | GGCCGGGCCTGGGCGGGGGCTTTATCATTCGCTTCCAGGTCGTGCTaGCAGGCCAGGAATTCCTCTTTCTCTGGAGCCTTGATCTCTTCG | + |
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Preference number: 5 (lower is better) Translates to: GRAWAGALSFASRSC*QARNSSFSGALISS Trigger: CGAAGAGATCAAGGCTCCAGAGAAAGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGCGAATGATAAAGCCCCCGCCCAGGCCCGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS GCA 90 bp | GTGGGCCGGGCCTGGGCGGGGGCTTTATCATTCGCTTCCAGGTCGTaGTGCCAGGCCAGGAATTCCTCTTTCTCTGGAGCCTTGATCTCT | + |
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Preference number: 5 (lower is better) Translates to: VGRAWAGALSFASRS*CQARNSSFSGALIS Trigger: AGAGATCAAGGCTCCAGAGAAAGAGGAATTCCTGGCCTGGCAGCACGACCTGGAAGCGAATGATAAAGCCCCCGCCCAGGCCCGGCCCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CCA 90 bp | CAGACAAGTAGACTTCCTTTCCACCCCCTGTCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGGCTTTATCATTCGCTTCCAGGTCGT | + |
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Preference number: 5 (lower is better) Translates to: QTSRLPFHPLSIETR*AGPGRGLYHSLPGR Trigger: ACGACCTGGAAGCGAATGATAAAGCCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGACAGGGGGTGGAAAGGAAGTCTACTTGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR CAA 90 bp | AGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCTCGTGAGGGGAAGCTaGCTCCAGTTGTTGAAGGAC | + |
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Preference number: 5 (lower is better) Translates to: SEDVHAHGEPSTACHPCGLVRGS*LQLLKD Trigger: GTCCTTCAACAACTGGAGCAAGCTTCCCCTCACGAG...ACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 |
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| CDS-3UTR CAA 90 bp | GTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGGTCGCTGGCTGGTTACTATaGGCTCAGAAGGATCATGGG | + |
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Preference number: 5 (lower is better) Translates to: VRMCMHTESPAPPAIPVVAGWLL*AQKDHG Trigger: CCCATGATCCTTCTGAGCCAATAGTAACCAGCCAGC...GACCACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CAA 90 bp | GTGTGGCTTCTGTCCCTGCTCCCCAGGTTCGGGTCTGGCTGTAGACATCTCTGGTTCAGCATGACGTGGTaGGGCTCCGGAAGCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: VWLLSLLPRFGSGCRHLWFSMTW*GSGSSA Trigger: AGCACTGCTTCCGGAGCCCAACCACGTCATGCTGAA...CCAGAGATGTCTACAGCCAGACCCGAACCTGGGGAGCAGGGACAGAAGCCACAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS GCA 90 bp | AGTGCTGGGTCACAAGAGATGCCCGTGTCCTTGTTCAAGATGACCTaGAGCAGGTGTGGCGGGAGGATGGGCGGGGCTTTGAACCTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SAGSQEMPVSLFKMT*SRCGGRMGGALNLS Trigger: AGAGAGGTTCAAAGCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTCATCTTGAACAAGGACACGGGCATCTCTTGTGACCCAGCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CAA 90 bp | GTGGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCAGGCCTGTCCCCATCCTaGGCGCCCCCGGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VVTYFFLYRCVALSTITPGLSPS*APPELS Trigger: GGACAGCTCCGGGGGCGCCAAGGATGGGGACAGGCC...TGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACCAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR CAA 90 bp | GGTGACATACTTTTTCTTGTACCGGTGTGTTGCACTGAGCACCATCACTCCATCGGCCTGTCCCCATCCTaGGCGCCCCCGGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: GDILFLVPVCCTEHHHSIGLSPS*APPELS Trigger: GGACAGCTCCGGGGGCGCCAAGGATGGGGACAGGCC...GATGGAGTGATGGTGCTCAGTGCAACACACCGGTACAAGAAAAAGTATGTCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS-3UTR CAA 90 bp | GTGAGTGAGGATGTGCATGCACACGGAGAGCCCAGCACCGCCTGCCATCCCTGTGCTGGCTGGTTACTATaGGCTCAGAAGGATCATGGG | + |
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Preference number: 5 (lower is better) Translates to: VSEDVHAHGEPSTACHPCAGWLL*AQKDHG Trigger: CCCATGATCCTTCTGAGCCAATAGTAACCAGCCAGC...ACAGGGATGGCAGGCGGTGCTGGGCTCTCCGTGTGCATGCACATCCTCACTCAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS CCA 90 bp | ACAAGAGATGCCCGTGTCCTTGTTCAAGATGACCTGCAGCAGGTGTaGCGGGAGGATGGGCGGGGCTTTGAACCTCTCTTCTGGTTTAGA | + |
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Preference number: 5 (lower is better) Translates to: TRDARVLVQDDLQQV*REDGRGFEPLFWFR Trigger: TCTAAACCAGAAGAGAGGTTCAAAGCCCCGCCCATCCTCCCGCCACACCTGCTGCAGGTCATCTTGAACAAGGACACGGGCATCTCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CAA 90 bp | GTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCCTGGTGACTTATGGCCTGTCCCCATCCTaGGCGCCCCCGGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: VIIAECSHMISSLILVTYGLSPS*APPELS Trigger: GGACAGCTCCGGGGGCGCCAAGGATGGGGACAGGCC...ATAAGTCACCAGGATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CAA 90 bp | AAAGCTGCATCCGGAAATCAGACACTGAATTTCCATAGGATCTACAATCTACTGGGCCTGTCCCCATCCTaGGCGCCCCCGGAGCTGTCC | + |
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Preference number: 5 (lower is better) Translates to: KAASGNQTLNFHRIYNLLGLSPS*APPELS Trigger: GGACAGCTCCGGGGGCGCCAAGGATGGGGACAGGCC...CAGTAGATTGTAGATCCTATGGAAATTCAGTGTCTGATTTCCGGATGCAGCTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS-3UTR CAA 90 bp | TCTGTCTTGAGAGTGATTATTGCTGAGTGTAGTCACATGATCTCTAGTCTCATCTTCAGCATGACGTGGTaGGGCTCCGGAAGCAGTGCT | + |
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Preference number: 5 (lower is better) Translates to: SVLRVIIAECSHMISSLIFSMTW*GSGSSA Trigger: AGCACTGCTTCCGGAGCCCAACCACGTCATGCTGAA...GATGAGACTAGAGATCATGTGACTACACTCAGCAATAATCACTCTCAAGACAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS GCA 72 bp | CCGGAGCTGTCCCTCCGCGGCGTCTTGTGGCCCGCCTaGCGCTCCAGCGCGGCGCGCTCGCTGCTCGTGTTG | + |
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Preference number: 6 (lower is better) Translates to: PELSLRGVLWPA*RSSAARSLLVL Trigger: CAACACGAGCAGCGAGCGCGCCGCGCTGGAGCGGCAGGCGGGCCACAAGACGCCGCGGAGGGACAGCTCCGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CAA 90 bp | GCGTCTTCAGGGCTGTCCATGAGGATCTTGGGCCTGTCCCCATCCTaGGCGCCCCCGGAGCTGTCCCTCCGCGGCGTCTTGTGGCCCGCC | + |
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Preference number: 6 (lower is better) Translates to: ASSGLSMRILGLSPS*APPELSLRGVLWPA Trigger: GGCGGGCCACAAGACGCCGCGGAGGGACAGCTCCGGGGGCGCCAAGGATGGGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAGACGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS TCA 72 bp | CGGAGTGGAAGATGTCGGCGTCTTCAGGGCTGTCCATaGGGATCTTGGGCCTGTCCCCATCCTTGGCGCCCC | + |
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Preference number: 6 (lower is better) Translates to: RSGRCRRLQGCP*GSWACPHPWRP Trigger: GGGGCGCCAAGGATGGGGACAGGCCCAAGATCCTCATGGACAGCCCTGAAGACGCCGACATCTTCCACTCCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CCA 72 bp | AGACTTCCTTTCCACCCCCTGTCCATCGAAACACGGTaGGCCGGGCCTGGGCGGGGGCTTTATCATTCGCTT | + |
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Preference number: 6 (lower is better) Translates to: RLPFHPLSIETR*AGPGRGLYHSL Trigger: AAGCGAATGATAAAGCCCCCGCCCAGGCCCGGCCCACCGTGTTTCGATGGACAGGGGGTGGAAAGGAAGTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CCA 72 bp | TGTAAGGCTCCTGGTGGTAGGGTCCTGGGGGCGAGCTaGACAGCTCTCAGAAGGATCATGGGTCCACTGTCC | + |
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Preference number: 6 (lower is better) Translates to: CKAPGGRVLGAS*TALRRIMGPLS Trigger: GGACAGTGGACCCATGATCCTTCTGAGAGCTGTCCAGCTCGCCCCCAGGACCCTACCACCAGGAGCCTTACA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CAA 72 bp | GGAAGCAGTGCTGGGTCACAAGAGATGCCCGTGTCCTaGTTCAAGATGACCTGCAGCAGGTGTGGCGGGAGG | + |
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Preference number: 6 (lower is better) Translates to: GSSAGSQEMPVS*FKMTCSRCGGR Trigger: CCTCCCGCCACACCTGCTGCAGGTCATCTTGAACAAGGACACGGGCATCTCTTGTGACCCAGCACTGCTTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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| CDS CCA 72 bp | AATTCCTCTTTCTCTGGAGCCTTGATCTCTTCGGAGTaGAAGATGTCGGCGTCTTCAGGGCTGTCCATGAGG | + |
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Preference number: 6 (lower is better) Translates to: NSSFSGALISSE*KMSASSGLSMR Trigger: CCTCATGGACAGCCCTGAAGACGCCGACATCTTCCACTCCGAAGAGATCAAGGCTCCAGAGAAAGAGGAATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 ENSMUST00000133098.9 ENSMUST00000148208.2 |
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| CDS CCA 72 bp | GGCGAGCTGGACAGCTCAGACACATCGGAGCACTTTTaGGAATCCACCATTAAAGCATCAAATACTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: GELDSSDTSEHF*ESTIKASNTSK Trigger: CTTTGAAGTATTTGATGCTTTAATGGTGGATTCCCAAAAGTGCTCCGATGTGTCTGAGCTGTCCAGCTCGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031486.14 ENSMUST00000111999.8 |
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