Pregenerated sensors for PRKAA2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028518Ensembl transcript IDs: ENSMUST00000030243.8
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGGGACAGGTAGGTCACAGAGAACCCGAGGAACAGGAGAGGGGGTaGGGTGGGGCAGACTTGGAACACGTTCACTTTGACTCTACAATT | + |
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Preference number: 1 (lower is better) Translates to: EGQVGHREPEEQERG*GGADLEHVHFDSTI Trigger: AATTGTAGAGTCAAAGTGAACGTGTTCCAAGTCTGCCCCACCCCACCCCCTCTCCTGTTCCTCGGGTTCTCTGTGACCTACCTGTCCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CCA 90 bp | CTGGACTGGGTACTGCGAGGGAGCACTAGCAGACCTGGAAATGCATaGGCCCCACCACTGCTACCTAGCAGTCATCTTCTAATGAATGCT | + |
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Preference number: 1 (lower is better) Translates to: LDWVLRGSTSRPGNA*APPLLPSSHLLMNA Trigger: AGCATTCATTAGAAGATGACTGCTAGGTAGCAGTGGTGGGGCCCATGCATTTCCAGGTCTGCTAGTGCTCCCTCGCAGTACCCAGTCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | GTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTaGCCGTCTGTGGGAGGGACAGGTAGGTCACAGAGAACCCGAGGA | + |
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Preference number: 1 (lower is better) Translates to: VRFGQVELKGQKQIL*PSVGGTGRSQRTRG Trigger: TCCTCGGGTTCTCTGTGACCTACCTGTCCCTCCCACAGACGGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | CCCAGACTCAGGATGACCCTATGTGCATGGTCAATGGAGCAGATCTaGATTAGCATCAGGCTCTGGGGAAGAGGTGTTACTCACTGTCAC | + |
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Preference number: 1 (lower is better) Translates to: PRLRMTLCAWSMEQI*ISIRLWGRGVTHCH Trigger: GTGACAGTGAGTAACACCTCTTCCCCAGAGCCTGATGCTAATTCAGATCTGCTCCATTGACCATGCACATAGGGTCATCCTGAGTCTGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CCA 90 bp | GCTCTGGGGAAGAGGTGTTACTCACTGTCACTAACGACCACACCGTaGCGCTCAGAGACAATCGTTTCTCCTATGTTCTTATGGGATGCT | + |
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Preference number: 1 (lower is better) Translates to: ALGKRCYSLSLTTTP*RSETIVSPMFLWDA Trigger: AGCATCCCATAAGAACATAGGAGAAACGATTGTCTCTGAGCGCCACGGTGTGGTCGTTAGTGACAGTGAGTAACACCTCTTCCCCAGAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | TTTCACAAACTCTTTCTGTTCAGCCCAGAAGATGATCAACTGCAGTaGGCCTGCTTACTGGACTGGGTACTGCGAGGGAGCACTAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: FHKLFLFSPEDDQLQ*ACLLDWVLRGSTSR Trigger: TCTGCTAGTGCTCCCTCGCAGTACCCAGTCCAGTAAGCAGGCTCACTGCAGTTGATCATCTTCTGGGCTGAACAGAAAGAGTTTGTGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | GGTGGGGCAGACTTGGAACACGTTCACTTTGACTCTACAATTATTTaGGAAGGCACCAGGTACGCTTTCTTTCTTTGTGTAGACAGTGGG | + |
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Preference number: 1 (lower is better) Translates to: GGADLEHVHFDSTII*EGTRYAFFLCVDSG Trigger: CCCACTGTCTACACAAAGAAAGAAAGCGTACCTGGTGCCTTCTCAAATAATTGTAGAGTCAAAGTGAACGTGTTCCAAGTCTGCCCCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | AAAGGATTAATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCTCCTaGGGAAGACGGAGGGAGGAGGTGGCATCGATAACAAATGTTAAG | + |
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Preference number: 1 (lower is better) Translates to: KGLMKGKSIEQDRGS*GRRREEVASITNVK Trigger: CTTAACATTTGTTATCGATGCCACCTCCTCCCTCCGTCTTCCTCAGGAGCCTCTGTCTTGCTCAATGCTTTTCCCTTTCATTAATCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CCA 90 bp | GATGTTCTACCTAAAAAGCATCATATGATTAGGAAAACCAGCATGTaGTACAAGCCCAGACTCAGGATGACCCTATGTGCATGGTCAATG | + |
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Preference number: 1 (lower is better) Translates to: DVLPKKHHMIRKTSM*YKPRLRMTLCAWSM Trigger: CATTGACCATGCACATAGGGTCATCCTGAGTCTGGGCTTGTACCACATGCTGGTTTTCCTAATCATATGATGCTTTTTAGGTAGAACATC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR GCA 90 bp | CATAAACTACAGTTACTAAAAGTCACATGCAGTCGCAACCGGCACTaGTATGCAAGGCTGGCAGTAAACATTAATGTTGGCTCACAAAAT | + |
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Preference number: 1 (lower is better) Translates to: HKLQLLKVTCSRNRH*YARLAVNINVGSQN Trigger: ATTTTGTGAGCCAACATTAATGTTTACTGCCAGCCTTGCATAGCAGTGCCGGTTGCGACTGCATGTGACTTTTAGTAACTGTAGTTTATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | GAAATAAGTGAAAGAGAAAATGTATTCAGTGAAGAACGTCACTGGTaGTGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: EISERENVFSEERHW*CCEVWSSRTERAEA Trigger: TGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCATCACCAGTGACGTTCTTCACTGAATACATTTTCTCTTTCACTTATTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | AGGTACGCTTTCTTTCTTTGTGTAGACAGTGGGTCTATGTCTCTTTaGTTCTGGGAAAATGTTCTCCATTTAGAAAACATGGGCTTCGAA | + |
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Preference number: 1 (lower is better) Translates to: RYAFFLCVDSGSMSL*FWENVLHLENMGFE Trigger: TTCGAAGCCCATGTTTTCTAAATGGAGAACATTTTCCCAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAAAGCGTACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 90 bp | ATTCCAGGACTTACAAACAACACACCAGTGTTTATTTTTATTACTTaGCTCTCAGATGTTTCACAAACTCTTTCTGTTCAGCCCAGAAGA | + |
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Preference number: 1 (lower is better) Translates to: IPGLTNNTPVFIFIT*LSDVSQTLSVQPRR Trigger: TCTTCTGGGCTGAACAGAAAGAGTTTGTGAAACATCTGAGAGTCAAGTAATAAAAATAAACACTGGTGTGTTGTTTGTAAGTCCTGGAAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR GCA 90 bp | TTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTaGAAGGTGCAGAGCAGAACACAATGTATTTCAAAATTATTTTGT | + |
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Preference number: 1 (lower is better) Translates to: FLKVCKSFELIVTVL*KVQSRTQCISKLFC Trigger: ACAAAATAATTTTGAAATACATTGTGTTCTGCTCTGCACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGCATGCCAGAGGGCCATaGCTGCCGGCCCTCCTCCCA | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRRHARGP*LPALLP Trigger: TGGGAGGAGGGCCGGCAGTCATGGCCCTCTGGCATG...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGACTTCACCCTGGGAGTaGCCAGGCAGAGCTGTGGTA | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRRTSPWE*PGRAVV Trigger: TACCACAGCTCTGCCTGGTCACTCCCAGGGTGAAGT...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCACTTCTTGTGCAAGAGTaGCCAGGCAGCCTAACAGCT | + |
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Preference number: 2 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSLLVQE*PGSLTA Trigger: AGCTGTTAGGCTGCCTGGGCACTCTTGCACAAGAAG...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR GCA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCAATCTTAATCTTCTTGTaGAAGAGTGCCCAGGCAGCC | + |
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Preference number: 2 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSILIFL*KSAQAA Trigger: GGCTGCCTGGGCACTCTTGCACAAGAAGATTAAGAT...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGCAGCCTAACAGCTGCTaGAGTTTAGGAGGTAAACCG | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRRQPNSC*SLGGKP Trigger: CGGTTTACCTCCTAAACTTCAGCAGCTGTTAGGCTG...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCTTCGAGATGAGTCACTaGATTCTCTCTGAAAACCAA | + |
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Preference number: 2 (lower is better) Translates to: CCEVWSSRTERAEANPVTFEMSH*ILSENQ Trigger: TTGGTTTTCAGAGAGAATTCAGTGACTCATCTCGAA...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCAACACTGCATGTCACCTaGGAATGTTCACACCAACTT | + |
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Preference number: 2 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSTLHVT*ECSHQL Trigger: AAGTTGGTGTGAACATTCCCAGGTGACATGCAGTGT...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCATTAGCATCAGGCTCTaGGGAAGAGGTGTTACTCAC | + |
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Preference number: 2 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSISIRL*GRGVTH Trigger: GTGAGTAACACCTCTTCCCCAGAGCCTGATGCTAAT...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CAA 90 bp | CCCTGTCCAATCAGGTTCAACAGTGAAGGTCACAGAGATCAAGCTTaGGAAGTATACAAAGACATGATGGCCAAAGCAAGGTTTTTAGCT | + |
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Preference number: 2 (lower is better) Translates to: PCPIRFNSEGHRDQA*EVYKDMMAKARFLA Trigger: AGCTAAAAACCTTGCTTTGGCCATCATGTCTTTGTATACTTCCAAAGCTTGATCTCTGTGACCTTCACTGTTGAACCTGATTGGACAGGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CAA 90 bp | ATGTTGGCTCACAAAATACAGGCCTGCAGTCTGATAACGTCTGGATaGGACCTGATTCTGAACAGGTTATGGCTGAAGAAGCTTAATCAA | + |
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Preference number: 2 (lower is better) Translates to: MLAHKIQACSLITSG*DLILNRLWLKKLNQ Trigger: TTGATTAAGCTTCTTCAGCCATAACCTGTTCAGAATCAGGTCCAATCCAGACGTTATCAGACTGCAGGCCTGTATTTTGTGAGCCAACAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCGGAACACGTTCACTTTaGCTCTACAATTATTTGAGA | + |
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Preference number: 2 (lower is better) Translates to: CCEVWSSRTERAEANPVTGTRSL*LYNYLR Trigger: TCTCAAATAATTGTAGAGTCAAAGTGAACGTGTTCC...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR GCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCTTAACTAAGCATGCTTaGATGTTAGCAGAGACTACA | + |
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Preference number: 2 (lower is better) Translates to: CCEVWSSRTERAEANPVTLTKHA*MLAETT Trigger: TGTAGTCTCTGCTAACATGCAAGCATGCTTAGTTAA...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCTTTTGTTTTGCTTGGTaGTGGTGTGATTTAACTAGG | + |
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Preference number: 2 (lower is better) Translates to: CCEVWSSRTERAEANPVTFCFAW*WCDLTR Trigger: CCTAGTTAAATCACACCACCACCAAGCAAAACAAAA...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCTGGTTTTGTTTTGCTTaGTGGTGGTGTGATTTAACT | + |
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Preference number: 2 (lower is better) Translates to: CCEVWSSRTERAEANPVTWFCFA*WWCDLT Trigger: AGTTAAATCACACCACCACCAAGCAAAACAAAACCA...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCGGATACAGACACATTTaGAGAAGTCAGAACTATGCC | + |
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Preference number: 2 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSGYRHI*RSQNYA Trigger: GGCATAGTTCTGACTTCTCCAAATGTGTCTGTATCC...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CAA 90 bp | CAGGTACGCTTTCTTTCTTTGTGTAGACAGTGGGTCTATGTCTCTTaGATTCTGGGAAAATGTTCTCCATTTAGAAAACATGGGCTTCGA | + |
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Preference number: 2 (lower is better) Translates to: QVRFLSLCRQWVYVS*ILGKCSPFRKHGLR Trigger: TCGAAGCCCATGTTTTCTAAATGGAGAACATTTTCCCAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAAAGCGTACCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGTCTTCTGGAATCTCATaGGAAACCTGGTCTAACAGT | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRRSSGIS*ETWSNS Trigger: ACTGTTAGACCAGGTTTCTCATGAGATTCCAGAAGA...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCACGTTCAGTGGCCATTaGAAAATGAATAAAACTGGC | + |
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Preference number: 2 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSTFSGH*KMNKTG Trigger: GCCAGTTTTATTCATTTTTCAATGGCCACTGAACGT...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR GCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCTTCATCAGTGAGGTGTaGTTGCCATCTACAGCGAAT | + |
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Preference number: 2 (lower is better) Translates to: DMMAKARFLAKGLMKGKSFISEV*LPSTAN Trigger: ATTCGCTGTAGATGGCAAGCACACCTCACTGATGAA...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCTGTTTTGCTTGGTGGTaGTGTGATTTAACTAGGCGC | + |
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Preference number: 2 (lower is better) Translates to: DMMAKARFLAKGLMKGKSCFAWW*CDLTRR Trigger: GCGCCTAGTTAAATCACACCACCACCAAGCAAAACA...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCTCACTGAATTCTCTCTaGAAACCAACTTACTCTATC | + |
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Preference number: 2 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSSLNSL*KPTYSI Trigger: GATAGAGTAAGTTGGTTTTCAGAGAGAATTCAGTGA...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGACCCATAGGATTGACTaGAATGTAGGAACTGTAAAT | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRRTHRID*NVGTVN Trigger: ATTTACAGTTCCTACATTTCAGTCAATCCTATGGGT...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CCA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCCCTTCATCACTGTTGTaGATGCTGTTATTAGAGGTA | + |
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Preference number: 2 (lower is better) Translates to: FNLKQGLAIYLVLRPQRIPSSLL*MLLLEV Trigger: TACCTCTAATAACAGCATCCACAACAGTGATGAAGG...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CAA 90 bp | CATTCCAGGACTTACAAACAACACACCAGTGTTTATTTTTATTACTaGACTCTCAGATGTTTCACAAACTCTTTCTGTTCAGCCCAGAAG | + |
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Preference number: 2 (lower is better) Translates to: HSRTYKQHTSVYFYY*TLRCFTNSFCSAQK Trigger: CTTCTGGGCTGAACAGAAAGAGTTTGTGAAACATCTGAGAGTCAAGTAATAAAAATAAACACTGGTGTGTTGTTTGTAAGTCCTGGAATG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR GCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGGAGAAGTCAGAACTATaGCACATTCATAAAACACAT | + |
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Preference number: 2 (lower is better) Translates to: MHIQTSRRKITMQLFPRREKSEL*HIHKTH Trigger: ATGTGTTTTATGAATGTGGCATAGTTCTGACTTCTC...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR GCA 72 bp | ATCAACTGCAGTGAGCCTGCTTACTGGACTGGGTACTaGGAGGGAGCACTAGCAGACCTGGAAATGCATGGG | + |
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Preference number: 3 (lower is better) Translates to: INCSEPAYWTGY*EGALADLEMHG Trigger: CCCATGCATTTCCAGGTCTGCTAGTGCTCCCTCGCAGTACCCAGTCCAGTAAGCAGGCTCACTGCAGTTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR CCA 72 bp | GTACTGCGAGGGAGCACTAGCAGACCTGGAAATGCATaGGCCCCACCACTGCTACCTAGCAGTCATCTTCTA | + |
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Preference number: 3 (lower is better) Translates to: VLRGSTSRPGNA*APPLLPSSHLL Trigger: TAGAAGATGACTGCTAGGTAGCAGTGGTGGGGCCCATGCATTTCCAGGTCTGCTAGTGCTCCCTCGCAGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR GCA 72 bp | TTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTaGCGGCCCTCCTCCCAGCTACCCCAGTCTGATAAA | + |
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Preference number: 3 (lower is better) Translates to: LRELANMPEGHD*RPSSQLPQSDK Trigger: TTTATCAGACTGGGGTAGCTGGGAGGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 72 bp | TTGAACCACCCCTACCTCAGCGGGTTCGTTCATCAGTaGGGTGTGCTTGCCATCTACAGCGAATTCACAGGT | + |
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Preference number: 3 (lower is better) Translates to: LNHPYLSGFVHQ*GVLAIYSEFTG Trigger: ACCTGTGAATTCGCTGTAGATGGCAAGCACACCTCACTGATGAACGAACCCGCTGAGGTAGGGGTGGTTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 72 bp | GGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTaGCCGTCTGTGGGAGGGACAGGTAGGTCACAGAGA | + |
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Preference number: 3 (lower is better) Translates to: GQVELKGQKQIL*PSVGGTGRSQR Trigger: TCTCTGTGACCTACCTGTCCCTCCCACAGACGGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR TCA 72 bp | ATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCTCCTaGGGAAGACGGAGGGAGGAGGTGGCATCGATAACA | + |
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Preference number: 3 (lower is better) Translates to: MKGKSIEQDRGS*GRRREEVASIT Trigger: TGTTATCGATGCCACCTCCTCCCTCCGTCTTCCTCAGGAGCCTCTGTCTTGCTCAATGCTTTTCCCTTTCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR GCA 72 bp | ACAAACTCTTTCTGTTCAGCCCAGAAGATGATCAACTaGAGTGAGCCTGCTTACTGGACTGGGTACTGCGAG | + |
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Preference number: 3 (lower is better) Translates to: TNSFCSAQKMIN*SEPAYWTGYCE Trigger: CTCGCAGTACCCAGTCCAGTAAGCAGGCTCACTGCAGTTGATCATCTTCTGGGCTGAACAGAAAGAGTTTGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| 3UTR-3UTR CAA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCAAGGAAGGAGGCCCATaGAACCACCCCTACCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSKEGGP*NHPYLS Trigger: GCTGAGGTAGGGGTGGTTCAATGGGCCTCCTTCCTT...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | AGGATGACCCTATGTGCATGGTCAATGGAGCAGATCTaGATTAGCATCAGGCTCTGGGGAAGAGGTGTTACT | + |
|
Preference number: 3 (lower is better) Translates to: RMTLCAWSMEQI*ISIRLWGRGVT Trigger: AGTAACACCTCTTCCCCAGAGCCTGATGCTAATTCAGATCTGCTCCATTGACCATGCACATAGGGTCATCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | AGTCTCACATTTAGGTATGAGACTTCACCCTGGGAGTaGCCAGGCAGAGCTGTGGTATCTGTGTTAGGTATG | + |
|
Preference number: 3 (lower is better) Translates to: SLTFRYETSPWE*PGRAVVSVLGM Trigger: CATACCTAACACAGATACCACAGCTCTGCCTGGTCACTCCCAGGGTGAAGTCTCATACCTAAATGTGAGACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | CAAATGTTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTGCCGGCCCTCCACTGTTGTTGGTATTTaGCTTGTCTCATTGAACTGT | + |
|
Preference number: 3 (lower is better) Translates to: QMLRELANMPEGHDCRPSTVVGI*LVSLNC Trigger: ACAGTTCAATGAGACAAGCAAAATACCAACAACAGT...GGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAACATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | GATGTTTCACAAACTCTTTCTGTTCAGCCCAGAAGATaGTCAACTGCAGTGAGCCTGCTTACTGGACTGGGT | + |
|
Preference number: 3 (lower is better) Translates to: DVSQTLSVQPRR*STAVSLLTGLG Trigger: ACCCAGTCCAGTAAGCAGGCTCACTGCAGTTGATCATCTTCTGGGCTGAACAGAAAGAGTTTGTGAAACATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR GCA 72 bp | CAGTTACTAAAAGTCACATGCAGTCGCAACCGGCACTaGTATGCAAGGCTGGCAGTAAACATTAATGTTGGC | + |
|
Preference number: 3 (lower is better) Translates to: QLLKVTCSRNRH*YARLAVNINVG Trigger: GCCAACATTAATGTTTACTGCCAGCCTTGCATAGCAGTGCCGGTTGCGACTGCATGTGACTTTTAGTAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CCA 72 bp | GGCTCACAAAATACAGGCCTGCAGTCTGATAACGTCTaGATTGGACCTGATTCTGAACAGGTTATGGCTGAA | + |
|
Preference number: 3 (lower is better) Translates to: GSQNTGLQSDNV*IGPDSEQVMAE Trigger: TTCAGCCATAACCTGTTCAGAATCAGGTCCAATCCAGACGTTATCAGACTGCAGGCCTGTATTTTGTGAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCTTGCATGGTTTTGTTTaGCTTGGTGGTGGTGTGATT | + |
|
Preference number: 3 (lower is better) Translates to: CCEVWSSRTERAEANPVTLHGFV*LGGGVI Trigger: AATCACACCACCACCAAGCAAAACAAAACCATGCAA...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCGTACGCTTTCTTTCTTaGTGTAGACAGTGGGTCTAT | + |
|
Preference number: 3 (lower is better) Translates to: CCEVWSSRTERAEANPVTVRFLS*CRQWVY Trigger: ATAGACCCACTGTCTACACAAAGAAAGAAAGCGTAC...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | TCTGTTTCCAAGAGCAACAAATCCCTATGCTGTGACTaGATTCCTGCCTCTGCTTTTCGAGATGAGTCACTG | + |
|
Preference number: 3 (lower is better) Translates to: SVSKSNKSLCCD*IPASAFRDESL Trigger: CAGTGACTCATCTCGAAAAGCAGAGGCAGGAATTCAGTCACAGCATAGGGATTTGTTGCTCTTGGAAACAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR GCA 72 bp | GCTTTTAGACATAAACTACAGTTACTAAAAGTCACATaGAGTCGCAACCGGCACTGCTATGCAAGGCTGGCA | + |
|
Preference number: 3 (lower is better) Translates to: AFRHKLQLLKVT*SRNRHCYARLA Trigger: TGCCAGCCTTGCATAGCAGTGCCGGTTGCGACTGCATGTGACTTTTAGTAACTGTAGTTTATGTCTAAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCACCATGTTTTCAGTTTaGCATTCCAGTAGTCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: CCEVWSSRTERAEANPVTTMFSV*HSSSPS Trigger: ACTTGGACTACTGGAATGCAAAACTGAAAACATGGT...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | TCTATTCAGTTCCTTACTTCAAGGCCTTCCATGCCATaGTTAGGCAAACATCATAAGGTGATCTCTCCCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SIQFLTSRPSMP*LGKHHKVISPP Trigger: TGGGGGAGAGATCACCTTATGATGTTTGCCTAATCATGGCATGGAAGGCCTTGAAGTAAGGAACTGAATAGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CCA 72 bp | GTGTTTTCGGTGATTTCAATAACACTGCATGTCACCTaGGAATGTTCACACCAACTTCTATTGCAGAGCACG | + |
|
Preference number: 3 (lower is better) Translates to: VFSVISITLHVT*ECSHQLLLQST Trigger: CGTGCTCTGCAATAGAAGTTGGTGTGAACATTCCCAGGTGACATGCAGTGTTATTGAAATCACCGAAAACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTACATATACCCAATTCCCTAACACAGAGGGTCTTAATGTTTCTGCTTAGCGGCAAAGTAGGGTTTTaGCAGTTATGTGGGGTCTTT | + |
|
Preference number: 3 (lower is better) Translates to: VLHIPNSLTQRVLMFLLSGKVGF*QLCGVF Trigger: AAAGACCCCACATAACTGCAAAAACCCTACTTTGCC...GCTAAGCAGAAACATTAAGACCCTCTGTGTTAGGGAATTGGGTATATGTAGCAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | CTTAGGGGCTTTGAAACGGCTTCTCACACACATCTGTaGGGTAGGTTATCATCCACATTTTGTACAAGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: LRGFETASHTHL*GRLSSTFCTRE Trigger: TTCTCTTGTACAAAATGTGGATGATAACCTACCTCACAGATGTGTGTGAGAAGCCGTTTCAAAGCCCCTAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CCA 72 bp | AGGCACCAGGTACGCTTTCTTTCTTTGTGTAGACAGTaGGTCTATGTCTCTTTGATTCTGGGAAAATGTTCT | + |
|
Preference number: 3 (lower is better) Translates to: RHQVRFLSLCRQ*VYVSLILGKCS Trigger: AGAACATTTTCCCAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAAAGCGTACCTGGTGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCATCAGTGAGGTGTGCTaGCCATCTACAGCGAATTCA | + |
|
Preference number: 3 (lower is better) Translates to: FNLKQGLAIYLVLRPQRIISEVC*PSTANS Trigger: TGAATTCGCTGTAGATGGCAAGCACACCTCACTGAT...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGTTGGTTAGTGTACCTTaGAAATGCCTCGGACTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: MHIQTSRRKITMQLFPRRLVSVP*KCLGLR Trigger: CCTTAGTCCGAGGCATTTCAAAGGTACACTAACCAA...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | CTCTGTGTCCATCCCTTTCATTTTAGGGTTTTAAATTaGGGCCAAGTCCTAGATCACACTTACTATCCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LCVHPFHFRVLN*GQVLDHTYYPE Trigger: CTCTGGATAGTAAGTGTGATCTAGGACTTGGCCTCAATTTAAAACCCTAAAATGAAAGGGATGGACACAGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR GCA 72 bp | GTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTaGAAGGTGCAGAGCAGAACACAATGTATTTCAAAA | + |
|
Preference number: 3 (lower is better) Translates to: VCKSFELIVTVL*KVQSRTQCISK Trigger: TTTTGAAATACATTGTGTTCTGCTCTGCACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CCA 72 bp | ATAACGTCTGGATTGGACCTGATTCTGAACAGGTTATaGCTGAAGAAGCTTAATCAAAACTCCATCCAGTCT | + |
|
Preference number: 3 (lower is better) Translates to: ITSGLDLILNRL*LKKLNQNSIQS Trigger: AGACTGGATGGAGTTTTGATTAAGCTTCTTCAGCCATAACCTGTTCAGAATCAGGTCCAATCCAGACGTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR-3UTR CAA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGATGAATAAAACTGGCTaGCTATCCATGAAGCCACAA | + |
|
Preference number: 3 (lower is better) Translates to: MHIQTSRRKITMQLFPRRMNKTG*LSMKPQ Trigger: TTGTGGCTTCATGGATAGCAAGCCAGTTTTATTCAT...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | ATATTTAAGGCTTCCCTGTCCAATCAGGTTCAACAGTaGAGGTCACAGAGATCAAGCTTTGGAAGTATACAA | + |
|
Preference number: 3 (lower is better) Translates to: IFKASLSNQVQQ*RSQRSSFGSIQ Trigger: TTGTATACTTCCAAAGCTTGATCTCTGTGACCTTCACTGTTGAACCTGATTGGACAGGGAAGCCTTAAATAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | ACTGAATTCCTGCCTCTGCTTTTCGAGATGAGTCACTaGATTCTCTCTGAAAACCAACTTACTCTATCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TEFLPLLFEMSH*ILSENQLTLSS Trigger: AGATGATAGAGTAAGTTGGTTTTCAGAGAGAATTCAGTGACTCATCTCGAAAAGCAGAGGCAGGAATTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | GACTTGGAACACGTTCACTTTGACTCTACAATTATTTaGGAAGGCACCAGGTACGCTTTCTTTCTTTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLEHVHFDSTII*EGTRYAFFLCV Trigger: TACACAAAGAAAGAAAGCGTACCTGGTGCCTTCTCAAATAATTGTAGAGTCAAAGTGAACGTGTTCCAAGTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CCA 72 bp | TGGCGCTCAGAGACAATCGTTTCTCCTATGTTCTTATaGGATGCTACAGTTCCTTTATTGTTTCAATTTGAA | + |
|
Preference number: 3 (lower is better) Translates to: WRSETIVSPMFL*DATVPLLFQFE Trigger: TTCAAATTGAAACAATAAAGGAACTGTAGCATCCCATAAGAACATAGGAGAAACGATTGTCTCTGAGCGCCA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR GCA 72 bp | TGTACAAGAGAAAACTACACAAGGTTACATAACTTGTaGTGCTATCGTAACACACAGGGAATTAGATCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: CTRENYTRLHNL*CYRNTQGIRSN Trigger: ATTGGATCTAATTCCCTGTGTGTTACGATAGCAGCACAAGTTATGTAACCTTGTGTAGTTTTCTCTTGTACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | CACACCAACTTCTATTGCAGAGCACGTAATACCGAGTaGGATAATAATTTAAAGAGTGTATGTGATTTCACA | + |
|
Preference number: 3 (lower is better) Translates to: HTNFYCRARNTE*DNNLKSVCDFT Trigger: TGTGAAATCACATACACTCTTTAAATTATTATCTCACTCGGTATTACGTGCTCTGCAATAGAAGTTGGTGTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | TTCTTTCTTTGTGTAGACAGTGGGTCTATGTCTCTTTaGTTCTGGGAAAATGTTCTCCATTTAGAAAACATG | + |
|
Preference number: 3 (lower is better) Translates to: FFLCVDSGSMSL*FWENVLHLENM Trigger: CATGTTTTCTAAATGGAGAACATTTTCCCAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR TCA 72 bp | TCTAAACTCAGTACCTACCATACCCATAGGATTGACTaGAATGTAGGAACTGTAAATTTGCAAAGAATTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SKLSTYHTHRID*NVGTVNLQRIL Trigger: AAGAATTCTTTGCAAATTTACAGTTCCTACATTTCAGTCAATCCTATGGGTATGGTAGGTACTGAGTTTAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | CAAATGTTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTGCCGGCCCTCCTCCACCTGGAGCATGTaGATCAGCAGAGTGGCGACA | + |
|
Preference number: 4 (lower is better) Translates to: QMLRELANMPEGHDCRPSSTWSM*ISRVAT Trigger: TGTCGCCACTCTGCTGATGCACATGCTCCAGGTGGA...GGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAACATTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCAATCCATGGTGTGACTaGCCAGGCGCGGGGATGCCG | + |
|
Preference number: 4 (lower is better) Translates to: CCEVWSSRTERAEANPVTNPWCD*PGAGMP Trigger: CGGCATCCCCGCGCCTGGGCAGTCACACCATGGATT...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGTTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTGCCGGCCCTCCGAAGGGCATACAGGATaGCACCACAGCTCCAGATAT | + |
|
Preference number: 4 (lower is better) Translates to: QMLRELANMPEGHDCRPSEGHTG*HHSSRY Trigger: ATATCTGGAGCTGTGGTGTCATCCTGTATGCCCTTC...GGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAACATTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | CAAATGTTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTGCCGGCCCTCCACTGCAAGCTGGTCTTaGGGGTCACCACTATACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QMLRELANMPEGHDCRPSTASWS*GSPLYR Trigger: TCTGTATAGTGGTGACCCTCAAGACCAGCTTGCAGT...GGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAACATTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGGCCCAGGCGCGGGGATaGCGAGGACAAAGTGCTGCC | + |
|
Preference number: 4 (lower is better) Translates to: MHIQTSRRKITMQLFPRRAQARG*RGQSAA Trigger: GGCAGCACTTTGTCCTCGGCATCCCCGCGCCTGGGC...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | GATTTACGTACAGGAAACATGAAGGAAGGAGGCCCATaGAACCACCCCTACCTCAGCGGGTTCGTTCATCAG | + |
|
Preference number: 4 (lower is better) Translates to: DLRTGNMKEGGP*NHPYLSGFVHQ Trigger: CTGATGAACGAACCCGCTGAGGTAGGGGTGGTTCAATGGGCCTCCTTCCTTCATGTTTCCTGTACGTAAATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | TGCTGTGAGGTTTGGTCAAGTAGAACTGAAAGGGCAGAAGCAAATCCTGTGACCACAGCCTTCCTGAGATaGCCTCAGGTGCTGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: CCEVWSSRTERAEANPVTTAFLR*PQVLHN Trigger: ATTATGCAGCACCTGAGGTCATCTCAGGAAGGCTGT...GGTCACAGGATTTGCTTCTGCCCTTTCAGTTCTACTTGACCAAACCTCACAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | ACTGAGGATGGGACTATAAACCCCTACTTAGGGGCTTaGAAACGGCTTCTCACACACATCTGTGAGGTAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TEDGTINPYLGA*KRLLTHICEVG Trigger: ACCTACCTCACAGATGTGTGTGAGAAGCCGTTTCAAAGCCCCTAAGTAGGGGTTTATAGTCCCATCCTCAGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGTGCTTTGGGGCTGTCTaGGATGAGAGGCGGCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: MHIQTSRRKITMQLFPRRCFGAV*DERRHP Trigger: AGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCA...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCCTTGACCGTGCTCTGTaGAGGCCCGCAGCAGAACAG | + |
|
Preference number: 4 (lower is better) Translates to: FNLKQGLAIYLVLRPQRILDRAL*RPAAEQ Trigger: CTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAG...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCAGAGCCAGAAAGGGAGTaGTTCTCAGCTGTGCTGGAA | + |
|
Preference number: 4 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSEPERE*FSAVLE Trigger: TTCCAGCACAGCTGAGAACCACTCCCTTTCTGGCTC...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | GATGCTGTTATTAGAGGTAAAGAATCTATTCAGTTCCTTACTTCAAGGCCTTCCATCCAGTGGACAGCGTaGTTTGGGGCTGTCTGCGAT | + |
|
Preference number: 4 (lower is better) Translates to: DAVIRGKESIQFLTSRPSIQWTA*FGAVCD Trigger: ATCGCAGACAGCCCCAAAGCACGCTGTCCACTGGAT...GGAAGGCCTTGAAGTAAGGAACTGAATAGATTCTTTACCTCTAATAACAGCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCAAGGTGCTGCATAATTTaGCGATCCACAGCTAGTTCG | + |
|
Preference number: 4 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSRCCII*RSTASS Trigger: CGAACTAGCTGTGGATCGCCAAATTATGCAGCACCT...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCGTTGAGTGCATCCAGTaGACAGCGTGCTTTGGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLAKGLMKGKSIEQDRGVECIQ*TACFGA Trigger: AGCCCCAAAGCACGCTGTCCACTGGATGCACTCAAC...GCCTCTGTCTTGCTCAATGCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCGCAGAACAGGAGCGCTaGGGTGTTGAAGAACCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DMMAKARFLAKGLMKGKSAEQER*GVEEPD Trigger: GTCTGGTTCTTCAACACCCCAGCGCTCCTGTTCTGC...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | CACAAAATACAGGCCTGCAGTCTGATAACGTCTGGATaGGACCTGATTCTGAACAGGTTATGGCTGAAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HKIQACSLITSG*DLILNRLWLKK Trigger: CTTCTTCAGCCATAACCTGTTCAGAATCAGGTCCAATCCAGACGTTATCAGACTGCAGGCCTGTATTTTGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCCATCGAAAGGGAGGGTaGCACAGAGAAGGGCATACA | + |
|
Preference number: 4 (lower is better) Translates to: DMMAKARFLAKGLMKGKSHRKGG*HREGHT Trigger: TGTATGCCCTTCTCTGTGGCACCCTCCCTTTCGATG...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCATGCCGAGGACAAAGTaGTGCCAGTCAAAGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: FNLKQGLAIYLVLRPQRIMPRTK*CQSKSQ Trigger: CTGGCTCTTTGACTGGCAGCACTTTGTCCTCGGCAT...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCAGGCGGCATCCTTTCTaGATGTGGTTTCAAGCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RFLAKGLMKGKSIEQDRGRRHPF*MWFQAW Trigger: CCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCT...GCCTCTGTCTTGCTCAATGCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTTCACACGCTTTGCTCTaGCTTCGGATTCCAAGATGC | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGSHALL*LRIPRC Trigger: GCATCTTGGAATCCGAAGCCAGAGCAAAGCGTGTGA...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTTGGCGACAGAACGGTTaGGATAGTCTGGGATGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGWRQNG*DSLGCK Trigger: TTTACATCCCAGACTATCTCAACCGTTCTGTCGCCA...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTATCCATAAAAGAACCTaGTGGAGGACTAGAGGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGIHKRT*WRTRGE Trigger: CTCGCCTCTAGTCCTCCATCAGGTTCTTTTATGGAT...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTACGGTTGAGATAGTCTaGGATGTAAAACACACCCCC | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGTVEIV*DVKHTP Trigger: GGGGGTGTGTTTTACATCCCAGACTATCTCAACCGT...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | ATCAGGTTCAACAGTGAAGGTCACAGAGATCAAGCTTaGGAAGTATACAAAGACATGATGGCCAAAGCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: IRFNSEGHRDQA*EVYKDMMAKAR Trigger: CCTTGCTTTGGCCATCATGTCTTTGTATACTTCCAAAGCTTGATCTCTGTGACCTTCACTGTTGAACCTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTCATCATCGATGCTTTTaGAGTCCAGAAGATAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGHHRCF*SPEDSS Trigger: GGAGCTATCTTCTGGACTTCAAAAGCATCGATGATG...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCAAGATGATAAGCCACTaGAAGCTGGTCTTGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FNLKQGLAIYLVLRPQRIKMISH*KLVLRV Trigger: GACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTT...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGAGTGGTTCTCAGCTGTaGTGGAATCAAAACTTGACC | + |
|
Preference number: 4 (lower is better) Translates to: MHIQTSRRKITMQLFPRRSGSQL*WNQNLT Trigger: GGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACT...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCATCTTAGCGTTCATCTaGGCATCCAGCAGCACATTC | + |
|
Preference number: 4 (lower is better) Translates to: RFLAKGLMKGKSIEQDRGILAFI*ASSSTF Trigger: GAATGTGCTGCTGGATGCCCAGATGAACGCTAAGAT...GCCTCTGTCTTGCTCAATGCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCATGTGGTTTCAAGCCTaGAGGAATATGCATGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: DMMAKARFLAKGLMKGKSMWFQA*RNMHGA Trigger: AGCGCCATGCATATTCCTCCAGGCTTGAAACCACAT...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | TTTTCTCAAAGTCTGCAAGTCTTTCGAGTTAATAGTCACTGTCCTCTGCAAGGTCATCCTTTCTGGATGTaGTTTCAAGCCTGGAGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: FSQSLQVFRVNSHCPLQGHPFWM*FQAWRN Trigger: ATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATG...ACCTTGCAGAGGACAGTGACTATTAACTCGAAAGACTTGCAGACTTTGAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCGGTTCTCAGCTGTGCTaGAATCAAAACTTGACCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DMMAKARFLAKGLMKGKSGSQLC*NQNLTV Trigger: CACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACC...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCCGAGGTAGAACTCACTaGCTTGGTTCATTATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DMMAKARFLAKGLMKGKSRGRTH*LGSLFS Trigger: GGAGAATAATGAACCAAGCCAGTGAGTTCTACCTCG...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR GCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGTACTCGAAGATGGTATaGATTCACTACCTTCCATTC | + |
|
Preference number: 4 (lower is better) Translates to: MHIQTSRRKITMQLFPRRYSKMV*IHYLPF Trigger: GAATGGAAGGTAGTGAATGCATACCATCTTCGAGTA...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | TGTTTTCAGTTTTGCATTCCAGTAGTCCAAGTACTTTaGGTTAGTGTACCTTTGAAATGCCTCGGACTAAGG | + |
|
Preference number: 4 (lower is better) Translates to: CFQFCIPVVQVL*VSVPLKCLGLR Trigger: CCTTAGTCCGAGGCATTTCAAAGGTACACTAACCAAAAGTACTTGGACTACTGGAATGCAAAACTGAAAACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | AATTATTTGAGAAGGCACCAGGTACGCTTTCTTTCTTaGTGTAGACAGTGGGTCTATGTCTCTTTGATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: NYLRRHQVRFLS*CRQWVYVSLIL Trigger: CAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAAAGCGTACCTGGTGCCTTCTCAAATAATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR TCA 90 bp | ATGCACATTCAGACTAGCAGGAGAAAAATAACAATGCAACTCTTTCCTAGGAGGACTATTCATCACTTCTaGCTCTGTACACTCGAATTT | + |
|
Preference number: 4 (lower is better) Translates to: MHIQTSRRKITMQLFPRRTIHHF*LCTLEF Trigger: AAATTCGAGTGTACAGAGTCAGAAGTGATGAATAGT...CCTCCTAGGAAAGAGTTGCATTGTTATTTTTCTCCTGCTAGTCTGAATGTGCAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CCA 90 bp | AGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCATTGAGCAAGACAGAGGCTTAACTGCCACTTTATaGCCTGTCAATTGGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: RFLAKGLMKGKSIEQDRGLTATL*PVNWCS Trigger: AGAACACCAATTGACAGGCCATAAAGTGGCAGTTAA...GCCTCTGTCTTGCTCAATGCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | TCTCCTATGTTCTTATGGGATGCTACAGTTCCTTTATaGTTTCAATTTGAAACAAGGTCTTGCTATCTATCT | + |
|
Preference number: 4 (lower is better) Translates to: SPMFLWDATVPL*FQFETRSCYLS Trigger: AGATAGATAGCAAGACCTTGTTTCAAATTGAAACAATAAAGGAACTGTAGCATCCCATAAGAACATAGGAGA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| 3UTR CAA 72 bp | TTTCTTTCTTTGTGTAGACAGTGGGTCTATGTCTCTTaGATTCTGGGAAAATGTTCTCCATTTAGAAAACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLCRQWVYVS*ILGKCSPFRKH Trigger: ATGTTTTCTAAATGGAGAACATTTTCCCAGAATCAAAGAGACATAGACCCACTGTCTACACAAAGAAAGAAA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | AGAGCCAGAAAGGGAGTGGTTCTCAGCTGTGCTGGAATCAAAACTTaGCCGTGCTCTGTGGAGGCCCGCAGCAGAACAGGAGCGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RARKGVVLSCAGIKT*PCSVEARSRTGALG Trigger: CCCCAGCGCTCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACTCCCTTTCTGGCTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 90 bp | AAACTTGACCGTGCTCTGTGGAGGCCCGCAGCAGAACAGGAGCGCTaGGGTGTTGAAGAACCAGACCTCTGCTCCACCACCTCATCATCG | + |
|
Preference number: 5 (lower is better) Translates to: KLDRALWRPAAEQER*GVEEPDLCSTTSSS Trigger: CGATGATGAGGTGGTGGAGCAGAGGTCTGGTTCTTCAACACCCCAGCGCTCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | GGCGCGGGGATGCCGAGGACAAAGTGCTGCCAGTCAAAGAGCCAGTaGGAGAGCCAGAAAGGGAGTGGTTCTCAGCTGTGCTGGAATCAA | + |
|
Preference number: 5 (lower is better) Translates to: GAGMPRTKCCQSKSQ*ESQKGSGSQLCWNQ Trigger: TTGATTCCAGCACAGCTGAGAACCACTCCCTTTCTGGCTCTCTCACTGGCTCTTTGACTGGCAGCACTTTGTCCTCGGCATCCCCGCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | GCTCATCATCGAAAGGGAGGGTGCCACAGAGAAGGGCATACAGGATaGCACCACAGCTCCAGATATCGACCTCGGGACCTGCATACAGCC | + |
|
Preference number: 5 (lower is better) Translates to: AHHRKGGCHREGHTG*HHSSRYRPRDLHTA Trigger: GGCTGTATGCAGGTCCCGAGGTCGATATCTGGAGCTGTGGTGTCATCCTGTATGCCCTTCTCTGTGGCACCCTCCCTTTCGATGATGAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 90 bp | GAGTGGTTCTCAGCTGTGCTGGAATCAAAACTTGACCGTGCTCTGTaGAGGCCCGCAGCAGAACAGGAGCGCTGGGGTGTTGAAGAACCA | + |
|
Preference number: 5 (lower is better) Translates to: EWFSAVLESKLDRAL*RPAAEQERWGVEEP Trigger: TGGTTCTTCAACACCCCAGCGCTCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 90 bp | ACAGCGTGCTTTGGGGCTGTCTGCGATGAGAGGCGGCATCCTTTCTaGATGTGGTTTCAAGCCTGGAGGAATATGCATGGCGCTGTCATC | + |
|
Preference number: 5 (lower is better) Translates to: TACFGAVCDERRHPF*MWFQAWRNMHGAVI Trigger: GATGACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCACGCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 90 bp | GAGCATGTGCATCAGCAGAGTGGCGACAGAACGGTTGAGATAGTCTaGGATGTAAAACACACCCCCTCGGATCTTCTTGAAGAGCGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: EHVHQQSGDRTVEIV*DVKHTPSDLLEERR Trigger: CCTACGCTCTTCAAGAAGATCCGAGGGGGTGTGTTTTACATCCCAGACTATCTCAACCGTTCTGTCGCCACTCTGCTGATGCACATGCTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 90 bp | TGCTTTGGGGCTGTCTGCGATGAGAGGCGGCATCCTTTCTGGATGTaGTTTCAAGCCTGGAGGAATATGCATGGCGCTGTCATCCATAAA | + |
|
Preference number: 5 (lower is better) Translates to: CFGAVCDERRHPFWM*FQAWRNMHGAVIHK Trigger: TTTATGGATGACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | CAAATGTTAAGGGAATTAGCAAACATGCCAGAGGGCCATGACTGCCGGCCCTCCATAATGTCACACGCTTaGCTCTGGCTTCGGATTCCA | + |
|
Preference number: 5 (lower is better) Translates to: QMLRELANMPEGHDCRPSIMSHA*LWLRIP Trigger: TGGAATCCGAAGCCAGAGCAAAGCGTGTGACATTAT...GGAGGGCCGGCAGTCATGGCCCTCTGGCATGTTTGCTAATTCCCTTAACATTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | CAAGCCTGGAGGAATATGCATGGCGCTGTCATCCATAAAAGAACCTaGTGGAGGACTAGAGGCGAGGTAGAACTCACTGGCTTGGTTCAT | + |
|
Preference number: 5 (lower is better) Translates to: QAWRNMHGAVIHKRT*WRTRGEVELTGLVH Trigger: ATGAACCAAGCCAGTGAGTTCTACCTCGCCTCTAGTCCTCCATCAGGTTCTTTTATGGATGACAGCGCCATGCATATTCCTCCAGGCTTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS GCA 90 bp | AGAGGCGGCATCCTTTCTGGATGTGGTTTCAAGCCTGGAGGAATATaGATGGCGCTGTCATCCATAAAAGAACCTGATGGAGGACTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: RGGILSGCGFKPGGI*MALSSIKEPDGGLE Trigger: CTCTAGTCCTCCATCAGGTTCTTTTATGGATGACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | TTTTGTTTTGCTTGGTGGTGGTGTGATTTAACTAGGCGCCTTGCACAACTGTCAAGTGGACAGCGTGCTTaGGGGCTGTCTGCGATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: FCFAWWWCDLTRRLAQLSSGQRA*GLSAMR Trigger: TCTCATCGCAGACAGCCCCAAAGCACGCTGTCCACT...TGACAGTTGTGCAAGGCGCCTAGTTAAATCACACCACCACCAAGCAAAACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | TACACTCGAATTTCTCACAGACTTCCTTCACAGCCTCATCGTCAATaGCATTCGCATCGTAGGAGGGGTCTTCAGGAAATAGGTAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: YTRISHRLPSQPHRQ*HSHRRRGLQEIGSW Trigger: CCAGCTACCTATTTCCTGAAGACCCCTCCTACGATGCGAATGTCATTGACGATGAGGCTGTGAAGGAAGTCTGTGAGAAATTCGAGTGTA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | TTCAATTTGAAACAAGGTCTTGCTATCTATCTAGTTCTTAGGCCCCAACGTATCCCCCCTCGGATCTTCTaGAAGAGCGTAGGCACGTGC | + |
|
Preference number: 5 (lower is better) Translates to: FNLKQGLAIYLVLRPQRIPPRIF*KSVGTC Trigger: GCACGTGCCTACGCTCTTCAAGAAGATCCGAGGGGG...GATACGTTGGGGCCTAAGAACTAGATAGATAGCAAGACCTTGTTTCAAATTGAA 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 90 bp | AAGCTGGTCTTGAGGGTCACCACTATACAGACTATTCATCACTTCTaGCTCTGTACACTCGAATTTCTCACAGACTTCCTTCACAGCCTC | + |
|
Preference number: 5 (lower is better) Translates to: KLVLRVTTIQTIHHF*LCTLEFLTDFLHSL Trigger: GAGGCTGTGAAGGAAGTCTGTGAGAAATTCGAGTGTACAGAGTCAGAAGTGATGAATAGTCTGTATAGTGGTGACCCTCAAGACCAGCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCCACTGCAAGCTGGTCTaGAGGGTCACCACTATACAG | + |
|
Preference number: 5 (lower is better) Translates to: DMMAKARFLAKGLMKGKSHCKLV*RVTTIQ Trigger: CTGTATAGTGGTGACCCTCAAGACCAGCTTGCAGTG...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | GACATGATGGCCAAAGCAAGGTTTTTAGCTAAAGGATTAATGAAAGGGAAAAGCTTCACAGCTAGAGACTaGGGCTTCGTTGTGTTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: DMMAKARFLAKGLMKGKSFTARD*GFVVLS Trigger: ACTCAACACAACGAAGCCCAAGTCTCTAGCTGTGAA...GCTTTTCCCTTTCATTAATCCTTTAGCTAAAAACCTTGCTTTGGCCATCATGTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS GCA 90 bp | TTGGTTCATTATTCTCCGATTGTCAATGATAAGATGATAAGCCACTaGAAGCTGGTCTTGAGGGTCACCACTATACAGACTATTCATCAC | + |
|
Preference number: 5 (lower is better) Translates to: LVHYSPIVNDKMISH*KLVLRVTTIQTIHH Trigger: GTGATGAATAGTCTGTATAGTGGTGACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTTATCATTGACAATCGGAGAATAATGAACCAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS-3UTR CAA 90 bp | GATGCTGTTATTAGAGGTAAAGAATCTATTCAGTTCCTTACTTCAAGGCCTTCCGTAGAACTCACTGGCTaGGTTCATTATTCTCCGATT | + |
|
Preference number: 5 (lower is better) Translates to: DAVIRGKESIQFLTSRPSVELTG*VHYSPI Trigger: AATCGGAGAATAATGAACCAAGCCAGTGAGTTCTAC...GGAAGGCCTTGAAGTAAGGAACTGAATAGATTCTTTACCTCTAATAACAGCATC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CAA 90 bp | GAGAGCCAGAAAGGGAGTGGTTCTCAGCTGTGCTGGAATCAAAACTaGACCGTGCTCTGTGGAGGCCCGCAGCAGAACAGGAGCGCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: ESQKGSGSQLCWNQN*TVLCGGPQQNRSAG Trigger: CCCAGCGCTCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACTCCCTTTCTGGCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 72 bp | CGAAAGGGAGGGTGCCACAGAGAAGGGCATACAGGATaGCACCACAGCTCCAGATATCGACCTCGGGACCTG | + |
|
Preference number: 6 (lower is better) Translates to: RKGGCHREGHTG*HHSSRYRPRDL Trigger: CAGGTCCCGAGGTCGATATCTGGAGCTGTGGTGTCATCCTGTATGCCCTTCTCTGTGGCACCCTCCCTTTCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 72 bp | TCAGCTGTGCTGGAATCAAAACTTGACCGTGCTCTGTaGAGGCCCGCAGCAGAACAGGAGCGCTGGGGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: SAVLESKLDRAL*RPAAEQERWGV Trigger: AACACCCCAGCGCTCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CAA 90 bp | GACTTGGGCTTCGTTGTGTTGAGTGCATCCAGTGGACAGCGTGCTTaGGGGCTGTCTGCGATGAGAGGCGGCATCCTTTCTGGATGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: DLGFVVLSASSGQRA*GLSAMRGGILSGCG Trigger: ACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCACGCTGTCCACTGGATGCACTCAACACAACGAAGCCCAAGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS TCA 72 bp | CATCCAGTGGACAGCGTGCTTTGGGGCTGTCTGCGATaGGAGGCGGCATCCTTTCTGGATGTGGTTTCAAGC | + |
|
Preference number: 6 (lower is better) Translates to: HPVDSVLWGCLR*EAASFLDVVSS Trigger: GCTTGAAACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCACGCTGTCCACTGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS GCA 72 bp | ACACCCCCTCGGATCTTCTTGAAGAGCGTAGGCACGTaGTCATCATCGAAAGGGAGGGTGCCACAGAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: TPPRIFLKSVGT*SSSKGRVPQRR Trigger: CCTTCTCTGTGGCACCCTCCCTTTCGATGATGAGCACGTGCCTACGCTCTTCAAGAAGATCCGAGGGGGTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
||
| CDS CCA 72 bp | ATGTCTTTGATAGTCGCTCGCTTCAGGGGGTCCACCTaGAGCATGTGCATCAGCAGAGTGGCGACAGAACGG | + |
|
Preference number: 6 (lower is better) Translates to: MSLIVARFRGST*SMCISRVATER Trigger: CCGTTCTGTCGCCACTCTGCTGATGCACATGCTCCAGGTGGACCCCCTGAAGCGAGCGACTATCAAAGACAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | AAGGGAGTGGTTCTCAGCTGTGCTGGAATCAAAACTTaGCCGTGCTCTGTGGAGGCCCGCAGCAGAACAGGA | + |
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Preference number: 6 (lower is better) Translates to: KGVVLSCAGIKT*PCSVEARSRTG Trigger: TCCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACTCCCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS GCA 72 bp | GCCGGCGCGCTTCCACCTCTTCAACCCGCCCATGTTTaGAGATGTAGTCGAACAATTCACCTCCAGACACAT | + |
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Preference number: 6 (lower is better) Translates to: AGALPPLQPAHV*RCSRTIHLQTH Trigger: ATGTGTCTGGAGGTGAATTGTTCGACTACATCTGCAAACATGGGCGGGTTGAAGAGGTGGAAGCGCGCCGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CCA 72 bp | GCTGTCTGCGATGAGAGGCGGCATCCTTTCTGGATGTaGTTTCAAGCCTGGAGGAATATGCATGGCGCTGTC | + |
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Preference number: 6 (lower is better) Translates to: AVCDERRHPFWM*FQAWRNMHGAV Trigger: GACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CAA 72 bp | TTCGTTGTGTTGAGTGCATCCAGTGGACAGCGTGCTTaGGGGCTGTCTGCGATGAGAGGCGGCATCCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: FVVLSASSGQRA*GLSAMRGGILS Trigger: AGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAAGCACGCTGTCCACTGGATGCACTCAACACAACGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CAA 72 bp | AAAGGGAGTGGTTCTCAGCTGTGCTGGAATCAAAACTaGACCGTGCTCTGTGGAGGCCCGCAGCAGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: KGSGSQLCWNQN*TVLCGGPQQNR Trigger: CCTGTTCTGCTGCGGGCCTCCACAGAGCACGGTCAAGTTTTGATTCCAGCACAGCTGAGAACCACTCCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | TATCGACCTCGGGACCTGCATACAGCCTTCCTGAGATaGCCTCAGGTGCTGCATAATTTGGCGATCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: YRPRDLHTAFLR*PQVLHNLAIHS Trigger: GCTGTGGATCGCCAAATTATGCAGCACCTGAGGTCATCTCAGGAAGGCTGTATGCAGGTCCCGAGGTCGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | GGAGCATGTGCATCAGCAGAGTGGCGACAGAACGGTTaGGATAGTCTGGGATGTAAAACACACCCCCTCGGA | + |
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Preference number: 6 (lower is better) Translates to: GACASAEWRQNG*DSLGCKTHPLG Trigger: TCCGAGGGGGTGTGTTTTACATCCCAGACTATCTCAACCGTTCTGTCGCCACTCTGCTGATGCACATGCTCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CCA 72 bp | TTTGGGGCTGTCTGCGATGAGAGGCGGCATCCTTTCTaGATGTGGTTTCAAGCCTGGAGGAATATGCATGGC | + |
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Preference number: 6 (lower is better) Translates to: FGAVCDERRHPF*MWFQAWRNMHG Trigger: GCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCTCATCGCAGACAGCCCCAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | CAGACCTCTGCTCCACCACCTCATCATCGATGCTTTTaGAGTCCAGAAGATAGCTCCGACTGTCTACCAGGT | + |
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Preference number: 6 (lower is better) Translates to: QTSAPPPHHRCF*SPEDSSDCLPG Trigger: ACCTGGTAGACAGTCGGAGCTATCTTCTGGACTTCAAAAGCATCGATGATGAGGTGGTGGAGCAGAGGTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | AGGAATATGCATGGCGCTGTCATCCATAAAAGAACCTaGTGGAGGACTAGAGGCGAGGTAGAACTCACTGGC | + |
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Preference number: 6 (lower is better) Translates to: RNMHGAVIHKRT*WRTRGEVELTG Trigger: GCCAGTGAGTTCTACCTCGCCTCTAGTCCTCCATCAGGTTCTTTTATGGATGACAGCGCCATGCATATTCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CCA 72 bp | CATCAGCAGAGTGGCGACAGAACGGTTGAGATAGTCTaGGATGTAAAACACACCCCCTCGGATCTTCTTGAA | + |
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Preference number: 6 (lower is better) Translates to: HQQSGDRTVEIV*DVKHTPSDLLE Trigger: TTCAAGAAGATCCGAGGGGGTGTGTTTTACATCCCAGACTATCTCAACCGTTCTGTCGCCACTCTGCTGATG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CCA 72 bp | GAGAGGCGGCATCCTTTCTGGATGTGGTTTCAAGCCTaGAGGAATATGCATGGCGCTGTCATCCATAAAAGA | + |
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Preference number: 6 (lower is better) Translates to: ERRHPFWMWFQA*RNMHGAVIHKR Trigger: TCTTTTATGGATGACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGATGCCGCCTCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CAA 72 bp | ATAGCTCGGTACACTTCAGCCATAATGTCACACGCTTaGCTCTGGCTTCGGATTCCAAGATGCCACTTGGCT | + |
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Preference number: 6 (lower is better) Translates to: IARYTSAIMSHA*LWLRIPRCHLA Trigger: AGCCAAGTGGCATCTTGGAATCCGAAGCCAGAGCAAAGCGTGTGACATTATGGCTGAAGTGTACCGAGCTAT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | ATTTCTCACAGACTTCCTTCACAGCCTCATCGTCAATaGCATTCGCATCGTAGGAGGGGTCTTCAGGAAATA | + |
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Preference number: 6 (lower is better) Translates to: ISHRLPSQPHRQ*HSHRRRGLQEI Trigger: TATTTCCTGAAGACCCCTCCTACGATGCGAATGTCATTGACGATGAGGCTGTGAAGGAAGTCTGTGAGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS GCA 72 bp | ATCCTTTCTGGATGTGGTTTCAAGCCTGGAGGAATATaGATGGCGCTGTCATCCATAAAAGAACCTGATGGA | + |
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Preference number: 6 (lower is better) Translates to: ILSGCGFKPGGI*MALSSIKEPDG Trigger: TCCATCAGGTTCTTTTATGGATGACAGCGCCATGCATATTCCTCCAGGCTTGAAACCACATCCAGAAAGGAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS GCA 72 bp | TATTCTCCGATTGTCAATGATAAGATGATAAGCCACTaGAAGCTGGTCTTGAGGGTCACCACTATACAGACT | + |
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Preference number: 6 (lower is better) Translates to: YSPIVNDKMISH*KLVLRVTTIQT Trigger: AGTCTGTATAGTGGTGACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTTATCATTGACAATCGGAGAATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CAA 72 bp | GTCAATGATAAGATGATAAGCCACTGCAAGCTGGTCTaGAGGGTCACCACTATACAGACTATTCATCACTTC | + |
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Preference number: 6 (lower is better) Translates to: VNDKMISHCKLV*RVTTIQTIHHF Trigger: GAAGTGATGAATAGTCTGTATAGTGGTGACCCTCAAGACCAGCTTGCAGTGGCTTATCATCTTATCATTGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS TCA 72 bp | TTGAGGGTCACCACTATACAGACTATTCATCACTTCTaGCTCTGTACACTCGAATTTCTCACAGACTTCCTT | + |
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Preference number: 6 (lower is better) Translates to: LRVTTIQTIHHF*LCTLEFLTDFL Trigger: AAGGAAGTCTGTGAGAAATTCGAGTGTACAGAGTCAGAAGTGATGAATAGTCTGTATAGTGGTGACCCTCAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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| CDS CCA 72 bp | ATCTTCTGTCTATTTAAGATCTTAACTGCCACTTTATaGCCTGTCAATTGGTGTTCTCCAATCTTCACTTTG | + |
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Preference number: 6 (lower is better) Translates to: IFCLFKILTATL*PVNWCSPIFTL Trigger: CAAAGTGAAGATTGGAGAACACCAATTGACAGGCCATAAAGTGGCAGTTAAGATCTTAAATAGACAGAAGAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030243.8 |
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