Pregenerated sensors for PRKAA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000050697Ensembl transcript IDs: ENSMUST00000051186.9, ENSMUST00000228218.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTaGATTCAGACAGCATACGTGACATCAGGGAGCCCCACACAGAGG | + |
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Preference number: 1 (lower is better) Translates to: LYKCSLLFYTAGIQR*IQTAYVTSGSPTQR Trigger: CCTCTGTGTGGGGCTCCCTGATGTCACGTATGCTGTCTGAATGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR GCA 90 bp | GAGGGAGGAGTTAAGGAGAAGAATTTATGGTTTTCTTTCCCAAGATaGCCCTTGGGGTACATATCTTTACACACCCAGCCACATGAGTTT | + |
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Preference number: 1 (lower is better) Translates to: EGGVKEKNLWFSFPR*PLGYISLHTQPHEF Trigger: AAACTCATGTGGCTGGGTGTGTAAAGATATGTACCCCAAGGGGCATCTTGGGAAAGAAAACCATAAATTCTTCTCCTTAACTCCTCCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR TCA 90 bp | GTGTGTGTTACGCTGTGTGTACCTACTGAATACGGGATAACAGAGTaGTCCTCATTCAATTCTGCACATCAGGCTTTTAACGATCAATCG | + |
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Preference number: 1 (lower is better) Translates to: VCVTLCVPTEYGITE*SSFNSAHQAFNDQS Trigger: CGATTGATCGTTAAAAGCCTGATGTGCAGAATTGAATGAGGATCACTCTGTTATCCCGTATTCAGTAGGTACACACAGCGTAACACACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 90 bp | GAGTTAAGGAGAAGAATTTATGGTTTTCTTTCCCAAGATGCCCCTTaGGGTACATATCTTTACACACCCAGCCACATGAGTTTATTTGTG | + |
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Preference number: 1 (lower is better) Translates to: ELRRRIYGFLSQDAP*GTYLYTPSHMSLFV Trigger: CACAAATAAACTCATGTGGCTGGGTGTGTAAAGATATGTACCCCAAGGGGCATCTTGGGAAAGAAAACCATAAATTCTTCTCCTTAACTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAGCGTCTCTGTGCACTaGCAGAAGCAACACGATTCA | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAASVSVH*QKQHDS Trigger: TGAATCGTGTTGCTTCTGTCAGTGCACAGAGACGCT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAGCGTCTCTGTGCACTaGCAGAAGCAACACGATTCA | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLSVSVH*QKQHDS Trigger: TGAATCGTGTTGCTTCTGTCAGTGCACAGAGACGCT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAGTCCCTGTGCAAACTaGATTCCAAAAGGCCAATCC | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAASPCAN*IPKGQS Trigger: GGATTGGCCTTTTGGAATGCAGTTTGCACAGGGACT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCATGATAGCGTCTCTGTaGACTGACAGAAGCAACACG | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLMIASL*TDRSNT Trigger: CGTGTTGCTTCTGTCAGTGCACAGAGACGCTATCAT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGTTTTCCAGTCCCTGTaGAAACTGCATTCCAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLVFQSL*KLHSKR Trigger: CCTTTTGGAATGCAGTTTGCACAGGGACTGGAAAAC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAGTGCTGGACAGGTTTaGGGATGGGGCAAAATATTT | + |
|
Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLSAGQV*GWGKIF Trigger: AAATATTTTGCCCCATCCCCAAACCTGTCCAGCACT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCATTCAATTCGGAGTTaGATAAAACAAGCCCCGAAC | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLHSIRS*IKQAPN Trigger: GTTCGGGGCTTGTTTTATTCAACTCCGAATTGAATG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCATTTTTAGGAAGTGCTaGAGTATTCAGGGCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLIFRKC*SIQGWY Trigger: ATACCAGCCCTGAATACTTCAGCACTTCCTAAAAAT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAATTTTTAGGAAGTGCTaGAGTATTCAGGGCTGGTAT | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAAIFRKC*SIQGWY Trigger: ATACCAGCCCTGAATACTTCAGCACTTCCTAAAAAT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCACTTACACCCATTATaGTATGCTACCACTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLHLHPL*YATTKR Trigger: CCTTTTAGTGGTAGCATAGCATAATGGGTGTAAGTG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACACTTACACCCATTATaGTATGCTACCACTAAAAGG | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAAHLHPL*YATTKR Trigger: CCTTTTAGTGGTAGCATAGCATAATGGGTGTAAGTG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGTCCTTTCTATGCACTaGATTGGCTTAGAAAATACC | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAAVLSMH*IGLENT Trigger: GGTATTTTCTAAGCCAATCCAGTGCATAGAAAGGAC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGTCCTTTCTATGCACTaGATTGGCTTAGAAAATACC | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLVLSMH*IGLENT Trigger: GGTATTTTCTAAGCCAATCCAGTGCATAGAAAGGAC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTTCTATGCACTGGATTaGCTTAGAAAATACCAAAGA | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLFYALD*LRKYQR Trigger: TCTTTGGTATTTTCTAAGCCAATCCAGTGCATAGAA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAACCTTAACATCTCAGTaGTTCAGAATAAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: YNFTNAAFCSTQREYSAATLTSQ*FRIKAN Trigger: GTTTGCTTTTATTCTGAACCACTGAGATGTTAAGGT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCACCTTAACATCTCAGTaGTTCAGAATAAAAGCAAAC | + |
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Preference number: 2 (lower is better) Translates to: GHKHTGINTVRNSGKWSLTLTSQ*FRIKAN Trigger: GTTTGCTTTTATTCTGAACCACTGAGATGTTAAGGT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR TCA 72 bp | CAGCGGGAATACAGCGCTGCATTCAGACAGCATACGTaGCATCAGGGAGCCCCACACAGAGGGCACAAACAC | + |
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Preference number: 3 (lower is better) Translates to: QREYSAAFRQHT*HQGAPHRGHKH Trigger: GTGTTTGTGCCCTCTGTGTGGGGCTCCCTGATGTCACGTATGCTGTCTGAATGCAGCGCTGTATTCCCGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR GCA 72 bp | TGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTaGATTCAGACAGCATACGTGACATCAGGGAGCCCC | + |
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Preference number: 3 (lower is better) Translates to: CSLLFYTAGIQR*IQTAYVTSGSP Trigger: GGGGCTCCCTGATGTCACGTATGCTGTCTGAATGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | ACTCCTCCCAACAACGGCTTACAGTCAGGCTGTGTGTaGCATTCCATTCATCATGTCAGAGCCCACAATGAA | + |
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Preference number: 3 (lower is better) Translates to: TPPNNGLQSGCV*HSIHHVRAHNE Trigger: TTCATTGTGGGCTCTGACATGATGAATGGAATGCCACACACAGCCTGACTGTAAGCCGTTGTTGGGAGGAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | AGGTTACTCTGGGCAAACATACATAAGCCACAATGGTaGACTCCTCCCAACAACGGCTTACAGTCAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: RLLWANIHKPQW*TPPNNGLQSGC Trigger: ACAGCCTGACTGTAAGCCGTTGTTGGGAGGAGTCCACCATTGTGGCTTATGTATGTTTGCCCAGAGTAACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | ATCAGGTTACTCTGGGCAAACATACATAAGCCACAATaGTGGACTCCTCCCAACAACGGCTTACAGTCAGGC | + |
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Preference number: 3 (lower is better) Translates to: IRLLWANIHKPQ*WTPPNNGLQSG Trigger: GCCTGACTGTAAGCCGTTGTTGGGAGGAGTCCACCATTGTGGCTTATGTATGTTTGCCCAGAGTAACCTGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | TGTTTCACGTTGCTGGAGATGACCCAGCCTCACCACTaGGCTAGAGCCTCTGACCAATTTCCTAAACTTAAA | + |
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Preference number: 3 (lower is better) Translates to: CFTLLEMTQPHH*ARASDQFPKLK Trigger: TTTAAGTTTAGGAAATTGGTCAGAGGCTCTAGCCCAGTGGTGAGGCTGGGTCATCTCCAGCAACGTGAAACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGCATTTTGTTTCACGTaGCTGGAGATGACCCAGCCT | + |
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Preference number: 3 (lower is better) Translates to: YNFTNAAFCSTQREYSAAAFCFT*LEMTQP Trigger: AGGCTGGGTCATCTCCAGCAACGTGAAACAAAATGC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR GCA 72 bp | AGACATTCAACACTGGCTGACATGATAGCGTCTCTGTaGACTGACAGAAGCAACACGATTCACTACAGTGTG | + |
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Preference number: 3 (lower is better) Translates to: RHSTLADMIASL*TDRSNTIHYSV Trigger: CACACTGTAGTGAATCGTGTTGCTTCTGTCAGTGCACAGAGACGCTATCATGTCAGCCAGTGTTGAATGTCT 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR TCA 72 bp | ACGCTGTGTGTACCTACTGAATACGGGATAACAGAGTaGTCCTCATTCAATTCTGCACATCAGGCTTTTAAC | + |
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Preference number: 3 (lower is better) Translates to: TLCVPTEYGITE*SSFNSAHQAFN Trigger: GTTAAAAGCCTGATGTGCAGAATTGAATGAGGATCACTCTGTTATCCCGTATTCAGTAGGTACACACAGCGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | AGAAGAATTTATGGTTTTCTTTCCCAAGATGCCCCTTaGGGTACATATCTTTACACACCCAGCCACATGAGT | + |
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Preference number: 3 (lower is better) Translates to: RRIYGFLSQDAP*GTYLYTPSHMS Trigger: ACTCATGTGGCTGGGTGTGTAAAGATATGTACCCCAAGGGGCATCTTGGGAAAGAAAACCATAAATTCTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAAAGTCAAGTAAGCTaGAGACCTACAGTCCATTGT | + |
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Preference number: 3 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKSQVS*RPTVHC Trigger: ACAATGGACTGTAGGTCTCAAGCTTACTTGACTTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAACTAGTAGCTATTTaGGAAGTTAAGGAGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKLVAI*EVKEPR Trigger: TCTGGGCTCCTTAACTTCCAAAATAGCTACTAGTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAACTAGTAGCTATTTaGGAAGTTAAGGAGCCCAGA | + |
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Preference number: 3 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKLVAI*EVKEPR Trigger: TCTGGGCTCCTTAACTTCCAAAATAGCTACTAGTTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAACCTGAAATAAACTaGGCCAGTTTGAAGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKPEIN*ASLKKG Trigger: TCCTTTCTTCAAACTGGCCAAGTTTATTTCAGGTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAACCTGAAATAAACTaGGCCAGTTTGAAGAAAGGA | + |
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Preference number: 3 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKPEIN*ASLKKG Trigger: TCCTTTCTTCAAACTGGCCAAGTTTATTTCAGGTTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAAGAAGCATCATTTTaGTCCGGAAATCAGTGCATA | + |
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Preference number: 3 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKEASF*SGNQCI Trigger: TATGCACTGATTTCCGGACAAAAATGATGCTTCTTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAAGAAGCATCATTTTaGTCCGGAAATCAGTGCATA | + |
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Preference number: 3 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKEASF*SGNQCI Trigger: TATGCACTGATTTCCGGACAAAAATGATGCTTCTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR GCA 72 bp | TTTAACGATCAATCGTTTTCCAGTCCCTGTGCAAACTaGATTCCAAAAGGCCAATCCTCAGTTATATACACA | + |
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Preference number: 3 (lower is better) Translates to: FNDQSFSSPCAN*IPKGQSSVIYT Trigger: TGTGTATATAACTGAGGATTGGCCTTTTGGAATGCAGTTTGCACAGGGACTGGAAAACGATTGATCGTTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | AGAGCGTATAAACACTGTCCTTTCTATGCACTGGATTaGCTTAGAAAATACCAAAGACATTCAACACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: RAYKHCPFYALD*LRKYQRHSTLA Trigger: AGCCAGTGTTGAATGTCTTTGGTATTTTCTAAGCCAATCCAGTGCATAGAAAGGACAGTGTTTATACGCTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | CATTCAGAGCGTATAAACACTGTCCTTTCTATGCACTaGATTGGCTTAGAAAATACCAAAGACATTCAACAC | + |
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Preference number: 3 (lower is better) Translates to: HSERINTVLSMH*IGLENTKDIQH Trigger: GTGTTGAATGTCTTTGGTATTTTCTAAGCCAATCCAGTGCATAGAAAGGACAGTGTTTATACGCTCTGAATG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | CACACAGGTATAAATACAGTCAGGAACTCAGGTAAATaGAGTCTCCATTACTTTATACAGCATTCAATTCGG | + |
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Preference number: 3 (lower is better) Translates to: HTGINTVRNSGK*SLHYFIQHSIR Trigger: CCGAATTGAATGCTGTATAAAGTAATGGAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| 3UTR CCA 72 bp | CATGTACTAATATGTGAAGGCTTTATGGTAAATTTATaGTCGACTGAGACCTGTTACAGCAAATTCAAATGG | + |
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Preference number: 3 (lower is better) Translates to: HVLICEGFMVNL*STETCYSKFKW Trigger: CCATTTGAATTTGCTGTAACAGGTCTCAGTCGACCATAAATTTACCATAAAGCCTTCACATATTAGTACATG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGGTGTGCCGGGCCCGTaGTGTTTCGGCAACCAAGAA | + |
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Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLGVPGP*CFGNQE Trigger: TTCTTGGTTGCCGAAACACCACGGGCCCGGCACACC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCCGGAAAGGATCTGCTaGAACAGACGGCGGCTTTCC | + |
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Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLPERIC*NRRRLS Trigger: GGAAAGCCGCCGTCTGTTCCAGCAGATCCTTTCCGG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCACACCGGAAAGGATCTaGTGGAACAGACGGCGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLTPERI*WNRRRL Trigger: AAGCCGCCGTCTGTTCCAGCAGATCCTTTCCGGTGT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGCAAAGCATAGAGAATaGCCCCGCTGCTCCAGATGT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAAKHRE*PRCSRC Trigger: ACATCTGGAGCAGCGGGGTCATTCTCTATGCTTTGC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGGTACTCTTTCAGGGTaGGGCCGAGTTAAATGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLGTLSG*GRVKWW Trigger: CCACCATTTAACTCGGCCTCACCCTGAAAGAGTACC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATCTGAGGGCTTTCCTTaGGCTTCGGCATCAGAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAASEGFP*ASASES Trigger: TGACTCTGATGCCGAAGCTCAAGGAAAGCCCTCAGA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCTGGTGCGGCATAATTaGGTGAGCCACAGCTTGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLLVRHN*VSHSLF Trigger: GAACAAGCTGTGGCTCACCCAATTATGCCGCACCAG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTTGCGGCCCTCTTCATaGGATCCACCTGCAGCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLLRPSS*DPPAAY Trigger: ATATGCTGCAGGTGGATCCCATGAAGAGGGCCGCAA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAACGGCTAGTGGGTCCTaGTGGTTTCTGTTGTACAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAATASGS*WFLLYR Trigger: CCTGTACAACAGAAACCACCAGGACCCACTAGCCGT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATGCGTACAATCTTCCTaGAATGACTTCTGGTGCGGC | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAACVQSS*NDFWCG Trigger: GCCGCACCAGAAGTCATTTCAGGAAGATTGTACGCA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCACCACTCGTGTTCCCTaGTATCTTTTATTGCGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLTTRVP*YLLLRP Trigger: GGGCCGCAATAAAAGATATCAGGGAACACGAGTGGT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGCCTTCCGTACACCTTaGTGTTTGGATTTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAAFRTP*CLDFCG Trigger: CCCACAGAAATCCAAACACCAAGGTGTACGGAAGGC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGCCTTCCGTACACCTTaGTGTTTGGATTTCTGTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLAFRTP*CLDFCG Trigger: CCCACAGAAATCCAAACACCAAGGTGTACGGAAGGC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGAATCTTCTGCCGGTTaGGTATCTTCACAGCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAESSAG*VSSQPL Trigger: AAGTGGCTGTGAAGATACTCAACCGGCAGAAGATTC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATGGAGTAGCAGTCCCTaGTTTGGCTTCTGTAATCTC | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAWSSSP*FGFCNL Trigger: GAGATTACAGAAGCCAAATCAGGGACTGCTACTCCA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAGATCGATAGTTGCTaGTGGATCCCGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKIDSC*WIPISV Trigger: CACAGAGATCGGGATCCATCAGCAACTATCGATCTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAGATCGATAGTTGCTaGTGGATCCCGATCTCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKIDSC*WIPISV Trigger: CACAGAGATCGGGATCCATCAGCAACTATCGATCTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAGGCTCCGAATCTTCTaGCGGTTGAGTATCTTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLRLRIF*RLSIFT Trigger: TGTGAAGATACTCAACCGGCAGAAGATTCGGAGCCT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATCCCAAATGCCATTTTaGCTTCCGTACACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAASQMPF*LPYTLV Trigger: CACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACCTGATATCTTTTATTaGGGCCCTCTTCATGGGATC | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAPDIFY*GPLHGI Trigger: GATCCCATGAAGAGGGCCGCAATAAAAGATATCAGG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAGAGTCAGGTGGGCTaGTTGCTAGGTAGAAATCTT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKSQVG*LLGRNL Trigger: AAGATTTCTACCTAGCAACCAGCCCACCTGACTCTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCACAATCTTCCTGAAATaGCTTCTGGTGCGGCATAAT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLTIFLK*LLVRHN Trigger: ATTATGCCGCACCAGAAGTCATTTCAGGAAGATTGT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTACAAACTTCTGCCATaGTATCATTGGGTCGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLYKLLP*YHWVGF Trigger: AAAGCCGACCCAATGATATCATGGCAGAAGTTTGTA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCTTCGAATTCCCAAATaGCATTTTGCCTTCCGTACA | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLLRIPK*HFAFRT Trigger: TGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAAAGAGTTGGCACATaGTCATCATCAAAAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKRVGT*SSSKGR Trigger: CCTCCCTTTTGATGATGACCATGTGCCAACTCTTTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAAAGAGTTGGCACATaGTCATCATCAAAAGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKRVGT*SSSKGR Trigger: CCTCCCTTTTGATGATGACCATGTGCCAACTCTTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAATCCAACTGCTTGATTaGTCTACAAACTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAIQLLD*STNFCH Trigger: ATGGCAGAAGTTTGTAGAGCAATCAAGCAGTTGGAT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCATCCAACTGCTTGATTaGTCTACAAACTTCTGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLIQLLD*STNFCH Trigger: ATGGCAGAAGTTTGTAGAGCAATCAAGCAGTTGGAT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCTTCGTCATCGATCATaGTTGAACTATAAGATGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLLRHRS*LNYKMG Trigger: ACCCATCTTATAGTTCAACCATGATCGATGACGAAG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGCTGTAGACTCATTTTaGAAAATGTGCTTGTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAAVDSF*KMCLSQ Trigger: CTGTGACAAGCACATTTTCCAAAATGAGTCTACAGC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGTCCTACTATCCACTTaGTATAGCTGTAGACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLVLLST*YSCRLI Trigger: AATGAGTCTACAGCTATACCAAGTGGATAGTAGGAC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGTCCTACTATCCACTTaGTATAGCTGTAGACTCATT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAVLLST*YSCRLI Trigger: AATGAGTCTACAGCTATACCAAGTGGATAGTAGGAC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACATATTCCATCACCATaGAAATATCAGATGGTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAHIPSP*KYQMVY Trigger: GTACACCATCTGATATTTTCATGGTGATGGAATATG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAAAAATTCTATTGTATaGCTTCCTGGTCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAAKNSIV*LPGLGA Trigger: AGCTCCAAGACCAGGAAGTCATACAATAGAATTTTT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 41% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR TCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCAAAAATTCTATTGTATaGCTTCCTGGTCTTGGAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLKNSIV*LPGLGA Trigger: AGCTCCAAGACCAGGAAGTCATACAATAGAATTTTT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTCATTTTGGAAAATGTaGTTGTCACAGGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLSFWKM*LSQDSS Trigger: GGAAGAATCCTGTGACAAGCACATTTTCCAAAATGA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR GCA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATCATTTTGGAAAATGTaGTTGTCACAGGATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: YNFTNAAFCSTQREYSAASFWKM*LSQDSS Trigger: GGAAGAATCCTGTGACAAGCACATTTTCCAAAATGA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCATGAAAATATCAGATaGTGTACTGATGACCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLHENIR*CTDDLV Trigger: TACCAGGTCATCAGTACACCATCTGATATTTTCATG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGTACACCTTGGTGTTTaGATTTCTGTGGGTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLVHLGV*ISVGLI Trigger: AATTAAACCCACAGAAATCCAAACACCAAGGTGTAC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS-3UTR CCA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCTTCTTAAAAAGAGTTaGCACATGGTCATCATCAAA | + |
|
Preference number: 4 (lower is better) Translates to: GHKHTGINTVRNSGKWSLLLKKS*HMVIIK Trigger: TTTGATGATGACCATGTGCCAACTCTTTTTAAGAAG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS TCA 90 bp | CGGGCCCGTGGTGTTTCGGCAACCAAGAACGGTACTCTTTCAGGGTaGGGCCGAGTTAAATGGTGGTCGTCCAGGAAAGAGTCAGGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: RARGVSATKNGTLSG*GRVKWWSSRKESGG Trigger: CCCACCTGACTCTTTCCTGGACGACCACCATTTAACTCGGCCTCACCCTGAAAGAGTACCGTTCTTGGTTGCCGAAACACCACGGGCCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS GCA 90 bp | TATGTCCGGTCAACTCGTGCTTGCCCACCTTCACTTTCCCGAAGGTaGCGACACCAAGCGTGTCCCCCAGGATGTAGTGGCCGATCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YVRSTRACPPSLSRR*RHQACPPGCSGRSS Trigger: TGAAGATCGGCCACTACATCCTGGGGGACACGCTTGGTGTCGGCACCTTCGGGAAAGTGAAGGTGGGCAAGCACGAGTTGACCGGACATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS TCA 90 bp | AGGCGACGGCTAGTGGGTCCTGGTGGTTTCTGTTGTACAGGCAGCTaGGGACCTCCTCCTCCGAACACTCGAACTTCTCACACACTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: RRRLVGPGGFCCTGS*GPPPPNTRTSHTLL Trigger: AAGAAGTGTGTGAGAAGTTCGAGTGTTCGGAGGAGGAGGTCCTCAGCTGCCTGTACAACAGAAACCACCAGGACCCACTAGCCGTCGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
||
| CDS GCA 90 bp | ACACCTTGGTGTTTGGATTTCTGTGGGTTTAATTCATCCAGGGTGTaGCGGGCCCGTGGTGTTTCGGCAACCAAGAACGGTACTCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TPWCLDFCGFNSSRV*RARGVSATKNGTLS Trigger: TGAAAGAGTACCGTTCTTGGTTGCCGAAACACCACGGGCCCGGCACACCCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CCA 90 bp | TTCGAATTCCCAAATGCCATTTTGCCTTCCGTACACCTTGGTGTTTaGATTTCTGTGGGTTTAATTCATCCAGGGTGTGCCGGGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: FEFPNAILPSVHLGV*ISVGLIHPGCAGPV Trigger: CACGGGCCCGGCACACCCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTCCTGGTGGTTTCTGTaGTACAGGCAGCTGAGGACC | + |
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Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLSWWFL*YRQLRT Trigger: GGTCCTCAGCTGCCTGTACAACAGAAACCACCAGGA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACGAATCTTCTGCCGGTaGAGTATCTTCACAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAARIFCR*SIFTAT Trigger: AGTGGCTGTGAAGATACTCAACCGGCAGAAGATTCG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCGAATCTTCTGCCGGTaGAGTATCTTCACAGCCACT | + |
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Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLRIFCR*SIFTAT Trigger: AGTGGCTGTGAAGATACTCAACCGGCAGAAGATTCG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAAGTCAGGTGGGCTGGTaGCTAGGTAGAAATCTTTGG | + |
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Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAASQVGW*LGRNLW Trigger: CCAAAGATTTCTACCTAGCAACCAGCCCACCTGACT...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTGCCTTCCGTACACCTaGGTGTTTGGATTTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLCLPYT*VFGFLW Trigger: CCACAGAAATCCAAACACCAAGGTGTACGGAAGGCA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATGCCTTCCGTACACCTaGGTGTTTGGATTTCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAACLPYT*VFGFLW Trigger: CCACAGAAATCCAAACACCAAGGTGTACGGAAGGCA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCTTCCCAAATGCCATTTaGCCTTCCGTACACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLFPNAI*PSVHLG Trigger: ACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAA...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCATTCCCAAATGCCATTTaGCCTTCCGTACACCTTGGT | + |
|
Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAAFPNAI*PSVHLG Trigger: ACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAA...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 90 bp | TTGATTGCTCTACAAACTTCTGCCATGATATCATTGGGTCGGCTTTaGCTTCGAATTCCCAAATGCCATTTTGCCTTCCGTACACCTTGG | + |
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Preference number: 5 (lower is better) Translates to: LIALQTSAMISLGRL*LRIPKCHFAFRTPW Trigger: CCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAGTCAAAGCCGACCCAATGATATCATGGCAGAAGTTTGTAGAGCAATCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCGTAGCAGTCCCTGATTaGGCTTCTGTAATCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLVAVPD*ASVISS Trigger: TGATGAGATTACAGAAGCCAAATCAGGGACTGCTAC...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCAGTAGCAGTCCCTGATTaGGCTTCTGTAATCTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAAVAVPD*ASVISS Trigger: TGATGAGATTACAGAAGCCAAATCAGGGACTGCTAC...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCATCAGAGTCACTCCTTaGGCAAGATCGATAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLIRVTP*ARSIVA Trigger: AGCAACTATCGATCTTGCCAAAGGAGTGACTCTGAT...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 90 bp | TGTTCCCTGATATCTTTTATTGCGGCCCTCTTCATGGGATCCACCTaGAGCATATGTTTCAAAAGGCTGATTACTGAAGGGTTTAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CSLISFIAALFMGST*SICFKRLITEGFKY Trigger: GTACTTAAACCCTTCAGTAATCAGCCTTTTGAAACATATGCTGCAGGTGGATCCCATGAAGAGGGCCGCAATAAAAGATATCAGGGAACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACATCTGACATCATGTTaGAAAGACCAAAGTCGGCTA | + |
|
Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAAHLTSC*KDQSRL Trigger: TAGCCGACTTTGGTCTTTCAAACATGATGTCAGATG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | TATAACTTTACAAATGCAGCCTTCTGTTCTACACAGCGGGAATACAGCGCTGCACGTACACCTTGGTGTTaGGATTTCTGTGGGTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: YNFTNAAFCSTQREYSAARTPWC*DFCGFN Trigger: ATTAAACCCACAGAAATCCAAACACCAAGGTGTACG...TGCAGCGCTGTATTCCCGCTGTGTAGAACAGAAGGCTGCATTTGTAAAGTTATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS-3UTR CAA 90 bp | GGGCACAAACACACAGGTATAAATACAGTCAGGAACTCAGGTAAATGGAGTCTCCGTACACCTTGGTGTTaGGATTTCTGTGGGTTTAAT | + |
|
Preference number: 5 (lower is better) Translates to: GHKHTGINTVRNSGKWSLRTPWC*DFCGFN Trigger: ATTAAACCCACAGAAATCCAAACACCAAGGTGTACG...GAGACTCCATTTACCTGAGTTCCTGACTGTATTTATACCTGTGTGTTTGTGCCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 72 bp | TCAACTCGTGCTTGCCCACCTTCACTTTCCCGAAGGTaGCGACACCAAGCGTGTCCCCCAGGATGTAGTGGC | + |
|
Preference number: 6 (lower is better) Translates to: STRACPPSLSRR*RHQACPPGCSG Trigger: GCCACTACATCCTGGGGGACACGCTTGGTGTCGGCACCTTCGGGAAAGTGAAGGTGGGCAAGCACGAGTTGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 72 bp | TGTCCACCTCGGGGCCTGCGTACAATCTTCCTGAAATaGCTTCTGGTGCGGCATAATTGGGTGAGCCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: CPPRGLRTIFLK*LLVRHNWVSHS Trigger: GCTGTGGCTCACCCAATTATGCCGCACCAGAAGTCATTTCAGGAAGATTGTACGCAGGCCCCGAGGTGGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 72 bp | CTAGTGGGTCCTGGTGGTTTCTGTTGTACAGGCAGCTaGGGACCTCCTCCTCCGAACACTCGAACTTCTCAC | + |
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Preference number: 6 (lower is better) Translates to: LVGPGGFCCTGS*GPPPPNTRTSH Trigger: GTGAGAAGTTCGAGTGTTCGGAGGAGGAGGTCCTCAGCTGCCTGTACAACAGAAACCACCAGGACCCACTAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 72 bp | GGTGTTTCGGCAACCAAGAACGGTACTCTTTCAGGGTaGGGCCGAGTTAAATGGTGGTCGTCCAGGAAAGAG | + |
|
Preference number: 6 (lower is better) Translates to: GVSATKNGTLSG*GRVKWWSSRKE Trigger: CTCTTTCCTGGACGACCACCATTTAACTCGGCCTCACCCTGAAAGAGTACCGTTCTTGGTTGCCGAAACACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 72 bp | AGTATCTTCACAGCCACTTTATGTCCGGTCAACTCGTaGTTGCCCACCTTCACTTTCCCGAAGGTGCCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SIFTATLCPVNS*LPTFTFPKVPT Trigger: TGTCGGCACCTTCGGGAAAGTGAAGGTGGGCAAGCACGAGTTGACCGGACATAAAGTGGCTGTGAAGATACT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 72 bp | TGTTTGGATTTCTGTGGGTTTAATTCATCCAGGGTGTaGCGGGCCCGTGGTGTTTCGGCAACCAAGAACGGT | + |
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Preference number: 6 (lower is better) Translates to: CLDFCGFNSSRV*RARGVSATKNG Trigger: ACCGTTCTTGGTTGCCGAAACACCACGGGCCCGGCACACCCTGGATGAATTAAACCCACAGAAATCCAAACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CAA 72 bp | GGGCTTTCCTTGAGCTTCGGCATCAGAGTCACTCCTTaGGCAAGATCGATAGTTGCTGATGGATCCCGATCT | + |
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Preference number: 6 (lower is better) Translates to: GLSLSFGIRVTP*ARSIVADGSRS Trigger: AGATCGGGATCCATCAGCAACTATCGATCTTGCCAAAGGAGTGACTCTGATGCCGAAGCTCAAGGAAAGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CAA 90 bp | CTTCGAATTCCCAAATGCCATTTTGCCTTCCGTACACCTTGGTGTTaGGATTTCTGTGGGTTTAATTCATCCAGGGTGTGCCGGGCCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LRIPKCHFAFRTPWC*DFCGFNSSRVCRAR Trigger: ACGGGCCCGGCACACCCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 72 bp | GGGTCGGCTTTGACTTCGAATTCCCAAATGCCATTTTaGCTTCCGTACACCTTGGTGTTTGGATTTCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSALTSNSQMPF*LPYTLVFGFLW Trigger: CCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAGTCAAAGCCGACCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS GCA 72 bp | CTGTTTAAACCACTCGTGTTCCCTGATATCTTTTATTaGGGCCCTCTTCATGGGATCCACCTGCAGCATATG | + |
|
Preference number: 6 (lower is better) Translates to: LFKPLVFPDIFY*GPLHGIHLQHM Trigger: CATATGCTGCAGGTGGATCCCATGAAGAGGGCCGCAATAAAAGATATCAGGGAACACGAGTGGTTTAAACAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CCA 72 bp | CCAAATGCCATTTTGCCTTCCGTACACCTTGGTGTTTaGATTTCTGTGGGTTTAATTCATCCAGGGTGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PNAILPSVHLGV*ISVGLIHPGCA Trigger: GGCACACCCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CAA 72 bp | CCCAAATGCCATTTTGCCTTCCGTACACCTTGGTGTTaGGATTTCTGTGGGTTTAATTCATCCAGGGTGTGC | + |
|
Preference number: 6 (lower is better) Translates to: PKCHFAFRTPWC*DFCGFNSSRVC Trigger: GCACACCCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CAA 72 bp | TGGGTCGGCTTTGACTTCGAATTCCCAAATGCCATTTaGCCTTCCGTACACCTTGGTGTTTGGATTTCTGTG | + |
|
Preference number: 6 (lower is better) Translates to: WVGFDFEFPNAI*PSVHLGVWISV Trigger: CACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAGTCAAAGCCGACCCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CAA 90 bp | CTTGATTGCTCTACAAACTTCTGCCATGATATCATTGGGTCGGCTTaGACTTCGAATTCCCAAATGCCATTTTGCCTTCCGTACACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: LDCSTNFCHDIIGSA*TSNSQMPFCLPYTL Trigger: CAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCGAAGTCAAAGCCGACCCAATGATATCATGGCAGAAGTTTGTAGAGCAATCAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 72 bp | CTACAAACTTCTGCCATGATATCATTGGGTCGGCTTTaGCTTCGAATTCCCAAATGCCATTTTGCCTTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LQTSAMISLGRL*LRIPKCHFAFR Trigger: ACGGAAGGCAAAATGGCATTTGGGAATTCGAAGTCAAAGCCGACCCAATGATATCATGGCAGAAGTTTGTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS CCA 72 bp | CGAATTCCCAAATGCCATTTTGCCTTCCGTACACCTTaGTGTTTGGATTTCTGTGGGTTTAATTCATCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RIPKCHFAFRTP*CLDFCGFNSSR Trigger: CCTGGATGAATTAAACCCACAGAAATCCAAACACCAAGGTGTACGGAAGGCAAAATGGCATTTGGGAATTCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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| CDS TCA 72 bp | TCATGGGATCCACCTGCAGCATATGTTTCAAAAGGCTaGTTACTGAAGGGTTTAAGTACTGAGGGGTATAAA | + |
|
Preference number: 6 (lower is better) Translates to: SWDPPAAYVSKG*LLKGLSTEGYK Trigger: TTTATACCCCTCAGTACTTAAACCCTTCAGTAATCAGCCTTTTGAAACATATGCTGCAGGTGGATCCCATGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051186.9 ENSMUST00000228218.2 |
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