Pregenerated sensors for PRIMPOL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038225Ensembl transcript IDs: ENSMUST00000040468.16, ENSMUST00000123328.2, ENSMUST00000125319.2, ENSMUST00000136335.8, ENSMUST00000209787.2, ENSMUST00000211400.2
Found 207 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTaGCAGCAGCGGCCTGTGGTGACAGTAGTGAGACCTGCTTATCAG | + |
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Preference number: 1 (lower is better) Translates to: ELSLLLPFLLLKPCS*QQRPVVTVVRPAYQ Trigger: CTGATAAGCAGGTCTCACTACTGTCACCACAGGCCGCTGCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR TCA 90 bp | GAGTCTGAAATACGCACAGACTCTGGTGATGGCAAAGTGTACTGCTaGGCTGTGGGGAATGACAGTCACTGCCAACAAACGTGCTGGGGC | + |
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Preference number: 1 (lower is better) Translates to: ESEIRTDSGDGKVYC*AVGNDSHCQQTCWG Trigger: GCCCCAGCACGTTTGTTGGCAGTGACTGTCATTCCCCACAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTGTGCGTATTTCAGACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR CCA 90 bp | AAATACGCACAGACTCTGGTGATGGCAAAGTGTACTGCTGAGCTGTaGGGAATGACAGTCACTGCCAACAAACGTGCTGGGGCGACTGGA | + |
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Preference number: 1 (lower is better) Translates to: KYAQTLVMAKCTAEL*GMTVTANKRAGATG Trigger: TCCAGTCGCCCCAGCACGTTTGTTGGCAGTGACTGTCATTCCCCACAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTGTGCGTATTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR TCA 90 bp | TTGAAATGGCAGGAGGGTCCTGAGGGGCTGGGGTACAGAGATCTGTaGGAGCTTTGTCGAGCAGTTCCTCATGGTGTGGTATTAGCAGTT | + |
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Preference number: 1 (lower is better) Translates to: LKWQEGPEGLGYRDL*ELCRAVPHGVVLAV Trigger: AACTGCTAATACCACACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCTCAGGACCCTCCTGCCATTTCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR GCA 90 bp | CAAGAGAAAGGACCAAAGGGAACGGGAAAGGTGAGTCCTGGTTACTaGACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCA | + |
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Preference number: 1 (lower is better) Translates to: QEKGPKGTGKVSPGY*TSEGIQAFACRVAA Trigger: TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCCGTTCCCTTTGGTCCTTTCTCTTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR CCA 90 bp | TGTAAGAATGCTGTCCAGAAAACAAATGAGAGAACACTGCATAAGTaGGGGAGCCTACCCTGCACCAGTGCCAGCCCAGGAAATGATAGC | + |
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Preference number: 1 (lower is better) Translates to: CKNAVQKTNERTLHK*GSLPCTSASPGNDS Trigger: GCTATCATTTCCTGGGCTGGCACTGGTGCAGGGTAGGCTCCCCCACTTATGCAGTGTTCTCTCATTTGTTTTCTGGACAGCATTCTTACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR TCA 90 bp | CTCTGTTATTTAAAGCAAGAAGCATTCTGGGCGCCGAAAACCACCTaGGAACCATCAACTATCAGCTGGGGAAGCTTCTCGAGCTGGACT | + |
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Preference number: 1 (lower is better) Translates to: LCYLKQEAFWAPKTT*EPSTISWGSFSSWT Trigger: AGTCCAGCTCGAGAAGCTTCCCCAGCTGATAGTTGATGGTTCTCAGGTGGTTTTCGGCGCCCAGAATGCTTCTTGCTTTAAATAACAGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR TCA 90 bp | TGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTaGGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGT | + |
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Preference number: 1 (lower is better) Translates to: CSYFRSCFIEMAGGS*GAGVQRSVRALSSS Trigger: ACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR GCA 90 bp | GCCATGCTCCTGACAGCAGCGGCCTGTGGTGACAGTAGTGAGACCTaGTTATCAGGGTGTACTACCGTTTTGTCATTCAAACTAAATTAC | + |
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Preference number: 1 (lower is better) Translates to: AMLLTAAACGDSSET*LSGCTTVLSFKLNY Trigger: GTAATTTAGTTTGAATGACAAAACGGTAGTACACCCTGATAAGCAGGTCTCACTACTGTCACCACAGGCCGCTGCTGTCAGGAGCATGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR CCA 90 bp | GACACAGGCAGTTCGCCCAGGTCACACATCTTTCTCTCCAGGCTCTaGGACAGTTTTTCTGCTGATTTTATTTGGCCACAGAAACTAAGG | + |
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Preference number: 1 (lower is better) Translates to: DTGSSPRSHIFLSRL*DSFSADFIWPQKLR Trigger: CCTTAGTTTCTGTGGCCAAATAAAATCAGCAGAAAAACTGTCCCAGAGCCTGGAGAGAAAGATGTGTGACCTGGGCGAACTGCCTGTGTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR TCA 90 bp | TATTGTAAGTCAGTGAGACAACAGCATCACCTTCTAGCTTCCTGCTaGAGGGAAGGAAGACTCGGTTACTCCTCAGATCTTCTAGGCGGT | + |
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Preference number: 1 (lower is better) Translates to: YCKSVRQQHHLLASC*REGRLGYSSDLLGG Trigger: ACCGCCTAGAAGATCTGAGGAGTAACCGAGTCTTCCTTCCCTTCAGCAGGAAGCTAGAAGGTGATGCTGTTGTCTCACTGACTTACAATA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR TCA 90 bp | GAAGTGCCAGTACTGTTAAAACACTCAGCCCGCTTTCGTTTAGTCTaGGATGGGTGGCATGTGAGAACTCGCAGAGTATCTGAGAATCTG | + |
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Preference number: 1 (lower is better) Translates to: EVPVLLKHSARFRLV*DGWHVRTRRVSENL Trigger: CAGATTCTCAGATACTCTGCGAGTTCTCACATGCCACCCATCTCAGACTAAACGAAAGCGGGCTGAGTGTTTTAACAGTACTGGCACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR GCA 90 bp | GAATTATATGTAAGAATGCTGTCCAGAAAACAAATGAGAGAACACTaGATAAGTGGGGGAGCCTACCCTGCACCAGTGCCAGCCCAGGAA | + |
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Preference number: 1 (lower is better) Translates to: ELYVRMLSRKQMREH*ISGGAYPAPVPAQE Trigger: TTCCTGGGCTGGCACTGGTGCAGGGTAGGCTCCCCCACTTATGCAGTGTTCTCTCATTTGTTTTCTGGACAGCATTCTTACATATAATTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR TCA 90 bp | CTTTGTCGAGCAGTTCCTCATGGTGTGGTATTAGCAGTTATGTTCTaGGAGGAGAGGAGATGGGCCAAAACCTGTTTCCTAATGATCCCA | + |
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Preference number: 1 (lower is better) Translates to: LCRAVPHGVVLAVMF*EERRWAKTCFLMIP Trigger: TGGGATCATTAGGAAACAGGTTTTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGAACTGCTCGACAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR GCA 90 bp | ACTTTCTGCATGACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTaGCTATGCTCAGAAAATGTCAGCCAAATTTATATTGACTGCAGT | + |
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Preference number: 1 (lower is better) Translates to: TFCMTSWLSCQAGYS*LCSENVSQIYIDCS Trigger: ACTGCAGTCAATATAAATTTGGCTGACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGTCATGCAGAAAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR TCA 90 bp | AATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGTaGAGTCTTCATCTTTCAGAAGAAATAGCAGACTTACTTCAGTGG | + |
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Preference number: 1 (lower is better) Translates to: NPWSVRCWCHLFLQK*SLHLSEEIADLLQW Trigger: CCACTGAAGTAAGTCTGCTATTTCTTCTGAAAGATGAAGACTTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR GCA 90 bp | ACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTTCATaGTTGTACACTCTATGTTGTTTATATGGGAGAAATGTTTTGTTA | + |
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Preference number: 1 (lower is better) Translates to: TKSTSVLFFPHPGCS*LYTLCCLYGRNVLL Trigger: TAACAAAACATTTCTCCCATATAAACAACATAGAGTGTACAAGCATGAACATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR GCA 90 bp | TACTCCTGCCTATGCTCAGAAAATGTCAGCCAAATTTATATTGACTaGAGTAGTTCCCAGGACTTGAGTAATTTGGTGGATTTTGTCATC | + |
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Preference number: 1 (lower is better) Translates to: YSCLCSENVSQIYID*SSSQDLSNLVDFVI Trigger: GATGACAAAATCCACCAAATTACTCAAGTCCTGGGAACTACTGCAGTCAATATAAATTTGGCTGACATTTTCTGAGCATAGGCAGGAGTA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR GCA 90 bp | TATTACTCTTGTGGGCTCTTCCAATGTTTTCACACCAGCGGTATTTaGATATATCATAAACCAGTAATTCTTCCGGGAAAAAGTAGTTCC | + |
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Preference number: 1 (lower is better) Translates to: YYSCGLFQCFHTSGI*IYHKPVILPGKSSS Trigger: GGAACTACTTTTTCCCGGAAGAATTACTGGTTTATGATATATGCAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGATGGCAGGAGGGTCCTaGGGGGCTGGGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMMAGGS*GAGVQR Trigger: TCTCTGTACCCCAGCCCCTCAGGACCCTCCTGCCAT...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGAGCTGGACTGAGAACTaGGCCTCCTGCTGCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMSWTEN*ASCCLF Trigger: GAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCT...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTTCTCGAGCTGGACTaGGAACTGAGCCTCCTGCTG | + |
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Preference number: 2 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLLLELD*ELSLLL Trigger: CAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGAAG...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCAGCTGGACTGAGAACTaGGCCTCCTGCTGCCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEASWTEN*ASCCLF Trigger: GAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCT...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCGAGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCTGCACAAGTCTGAGTTaGACAACTGCGCTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: VRGEPGHQVHFCSVLPSPCTSLS*TTALCF Trigger: AAAGCAGAGCGCAGTTGTTCAACTCAGACTTGTGCA...GGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCTCGCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR CCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCGCTGTTTCATTGAAATaGCAGGAGGGTCCTGAGGGG | + |
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Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAAVSLK*QEGPEG Trigger: CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGC...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCTTAGCAGTTATGTTCTaGGAGGAGAGGAGATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLLAVMF*EERRWA Trigger: GGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAA...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTGCACAAGTCTGAGTTaGACAACTGCGCTCTGCTTT | + |
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Preference number: 2 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMCTSLS*TTALCF Trigger: AAAGCAGAGCGCAGTTGTTCAACTCAGACTTGTGCA...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTACTGTGCACAAGTCTaGGTTGAACAACTGCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMYCAQV*VEQLRS Trigger: AGAGCGCAGTTGTTCAACTCAGACTTGTGCACAGTA...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCTGCCTTTTCTGCTCCTaGAGCCATGCTCCTGACAGC | + |
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Preference number: 2 (lower is better) Translates to: TSWLSCQAGYSCLCSENVCLFCS*SHAPDS Trigger: GCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCA...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCTACTGTGCACAAGTCTaGGTTGAACAACTGCGCTCT | + |
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Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAYCAQV*VEQLRS Trigger: AGAGCGCAGTTGTTCAACTCAGACTTGTGCACAGTA...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTCAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTTGTCCAGCCCAACGTGCTGGGGCGACTaGATAATCAAAGTAAACGGA | + |
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Preference number: 2 (lower is better) Translates to: SPQPTQTCCKGQPPLSSPTCWGD*IIKVNG Trigger: TCCGTTTACTTTGATTATCCAGTCGCCCCAGCACGT...TGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR TCA 90 bp | GCATTTGCTTGTAGAGTGGCAGCAGTTTGCAGAAAGGTAACGGACAGCATTATTATGGCAGGAGGGTCCTaGGGGGCTGGGGTACAGAGA | + |
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Preference number: 2 (lower is better) Translates to: AFACRVAAVCRKVTDSIIMAGGS*GAGVQR Trigger: TCTCTGTACCCCAGCCCCTCAGGACCCTCCTGCCAT...AATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCATCTGTGAGGCATGTCCCCATGGCTGTCACTGCTCACTGTGTGTCACACTTCTAGCTTCCTGCTaGAGGGAAGGAAGACTCGGT | + |
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Preference number: 2 (lower is better) Translates to: FVICEACPHGCHCSLCVTLLASC*REGRLG Trigger: ACCGAGTCTTCCTTCCCTTCAGCAGGAAGCTAGAAG...TGTGACACACAGTGAGCAGTGACAGCCATGGGGACATGCCTCACAGATGACAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCACTTCTAGCTTCCTGCTaGAGGGAAGGAAGACTCGGT | + |
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Preference number: 2 (lower is better) Translates to: PGYCTSEGIQAFACRVAALLASC*REGRLG Trigger: ACCGAGTCTTCCTTCCCTTCAGCAGGAAGCTAGAAG...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGGCTGACAAAGAACTGTaGCACAAGACCCCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: RGWGTEICESFVEQFLMVADKEL*HKTPEK Trigger: TTTCTCTGGGGTCTTGTGTCACAGTTCTTTGTCAGC...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR CCA 90 bp | AGTCCTCAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTTGTCCAGCCCACAAGATCGGCCTTGGTaGTTAGGGTTAGGAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: SPQPTQTCCKGQPPLSSPQDRPW*LGLGTK Trigger: TTTAGTTCCTAACCCTAACCACCAAGGCCGATCTTG...TGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCACCTGGAAGCCTTCAATaGACTCCACTGAAGTGCCAG | + |
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Preference number: 2 (lower is better) Translates to: PGYCTSEGIQAFACRVAAPGSLQ*TPLKCQ Trigger: CTGGCACTTCAGTGGAGTCCATTGAAGGCTTCCAGG...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR TCA 90 bp | TTTGTCATCTGTGAGGCATGTCCCCATGGCTGTCACTGCTCACTGTGTGTCACATTAGCAGTTATGTTCTaGGAGGAGAGGAGATGGGCC | + |
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Preference number: 2 (lower is better) Translates to: FVICEACPHGCHCSLCVTLAVMF*EERRWA Trigger: GGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAA...TGTGACACACAGTGAGCAGTGACAGCCATGGGGACATGCCTCACAGATGACAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCGGGTACAGAGATCTGTaGGAGCTTTGTCGAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: TSWLSCQAGYSCLCSENVGYRDL*ELCRAV Trigger: AACTGCTCGACAAAGCTCTCACAGATCTCTGTACCC...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| 3UTR-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCGGGTCATGGCATTTCTaGTACCAAACTTCATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAGSWHF*YQTSFF Trigger: GAAGAATGAAGTTTGGTATCAGAAATGCCATGACCC...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR GCA 90 bp | CTGACATTGCTCACCAGGGAAGATAGGAAATACTGGTTTTCCTCAGAAATATCTTGGGGGAGCCTACCCTaGACCAGTGCCAGCCCAGGA | + |
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Preference number: 2 (lower is better) Translates to: LTLLTREDRKYWFSSEISWGSLP*TSASPG Trigger: TCCTGGGCTGGCACTGGTGCAGGGTAGGCTCCCCCA...AGATATTTCTGAGGAAAACCAGTATTTCCTATCTTCCCTGGTGAGCAATGTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGCAAGATCGGCCTTGGTaGTTAGGGTTAGGAACTAAA | + |
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Preference number: 2 (lower is better) Translates to: RGWGTEICESFVEQFLMVQDRPW*LGLGTK Trigger: TTTAGTTCCTAACCCTAACCACCAAGGCCGATCTTG...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| 3UTR-3UTR CCA 90 bp | GAGAGGAGATGGGCCAAAACCTGTTTCCTAATGATCCCAGAGCAACAAAAGAGAGGGTATGGGGAGCCCTaGAAGCCTTCAATGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: ERRWAKTCFLMIPEQQKRGYGEP*KPSMDS Trigger: GGAGTCCATTGAAGGCTTCCAGGGCTCCCCATACCC...TCTCTTTTGTTGCTCTGGGATCATTAGGAAACAGGTTTTGGCCCATCTCCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| 3UTR-3UTR CCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCACAATCTATTCCCAGTaGATGACAGCACCTAAGCAT | + |
|
Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEATIYSQ*MTAPKH Trigger: ATGCTTAGGTGCTGTCATCCACTGGGAATAGATTGT...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR TCA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATAATGCAAGCATAGAATaGTCCTGGTTAATTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: RRARPPSPLLFCSSLTQDNASIE*SWLIRS Trigger: GCTCCTAATTAACCAGGATCATTCTATGCTTGCATT...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | AGTCCTCAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTTGTCCAGCCCAAATGCAAGCATAGAATaGTCCTGGTTAATTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: SPQPTQTCCKGQPPLSSPNASIE*SWLIRS Trigger: GCTCCTAATTAACCAGGATCATTCTATGCTTGCATT...TGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGTGCCTTTTCTGCTCCTaGAGCCATGCTCCTGACAGC | + |
|
Preference number: 2 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGCLFCS*SHAPDS Trigger: GCTGTCAGGAGCATGGCTTCAGGAGCAGAAAAGGCA...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCATGCACAAGTCTGAGTTaGACAACTGCGCTCTGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: PGYCTSEGIQAFACRVAACTSLS*TTALCF Trigger: AAAGCAGAGCGCAGTTGTTCAACTCAGACTTGTGCA...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | TCCTCATGGTGTGGTATTAGCAGTTATGTTCTGAGAGGAGAGGAGATGGGCCAAGGCAAAGTGTACTGCTaGGCTGTGGGGAATGACAGT | + |
|
Preference number: 2 (lower is better) Translates to: SSWCGISSYVLRGEEMGQGKVYC*AVGNDS Trigger: ACTGTCATTCCCCACAGCTCAGCAGTACACTTTGCC...TTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR GCA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATTCTGAGTTGAACAACTaGGCTCTGCTTTATCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: RRARPPSPLLFCSSLTQDSELNN*ALLYQF Trigger: AAACTGATAAAGCAGAGCGCAGTTGTTCAACTCAGA...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CCA 90 bp | GGGTTTGAGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAGAAGGGGAAAGGTGAGTCCTaGTTACTGCACATCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: GFENPWSVRCWCHLFLQKGKGES*LLHIRR Trigger: CCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCC...CTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCCACATGCAGATAGCTCACAATGATTCTGGAGCAGCTATGCAAGGAAAAGAATGGCCCAGAGTCTaGAATACGCACAGACTCTGG | + |
|
Preference number: 2 (lower is better) Translates to: EGHMQIAHNDSGAAMQGKEWPRV*NTHRLW Trigger: CCAGAGTCTGTGCGTATTTCAGACTCTGGGCCATTC...TTTTCCTTGCATAGCTGCTCCAGAATCATTGTGAGCTATCTGCATGTGGCCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCCTTTCCTATTTTGGATaGCTGATACAGTCGAAAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SRAGLRTEPPAAFSAPEALSYFG*LIQSKV Trigger: AACTTTCGACTGTATCAGTCATCCAAAATAGGAAAG...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CCA 90 bp | TCCTCATGGTGTGGTATTAGCAGTTATGTTCTGAGAGGAGAGGAGATGGGCCAAGGGAAAGGTGAGTCCTaGTTACTGCACATCAGAAGG | + |
|
Preference number: 2 (lower is better) Translates to: SSWCGISSYVLRGEEMGQGKGES*LLHIRR Trigger: CCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCC...TTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGGGGTACAGAGATCTGTaGGAGCTTTGTCGAGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGGYRDL*ELCRAV Trigger: AACTGCTCGACAAAGCTCTCACAGATCTCTGTACCC...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 48% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR GCA 90 bp | TCCTCATGGTGTGGTATTAGCAGTTATGTTCTGAGAGGAGAGGAGATGGGCCAAGGCTACTCCTGCCTATaGTCAGAAAATGTCAGCCAA | + |
|
Preference number: 2 (lower is better) Translates to: SSWCGISSYVLRGEEMGQGYSCL*SENVSQ Trigger: TTGGCTGACATTTTCTGAGCATAGGCAGGAGTAGCC...TTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGCACACTTTCCTATTTTaGATGACTGATACAGTCGAA | + |
|
Preference number: 2 (lower is better) Translates to: RGWGTEICESFVEQFLMVHTFLF*MTDTVE Trigger: TTCGACTGTATCAGTCATCCAAAATAGGAAAGTGTG...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR TCA 90 bp | ATTACTCTTGTGGGCTCTTCCAATGTTTTCACACCAGCGGTATTTGCATATATCAGCTGGACTGAGAACTaGGCCTCCTGCTGCCTTTTC | + |
|
Preference number: 2 (lower is better) Translates to: ITLVGSSNVFTPAVFAYISWTEN*ASCCLF Trigger: GAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCT...GATATATGCAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR TCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCAATTATTGTAAGTCAGTaGGACAACAGCATCACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: PGYCTSEGIQAFACRVAAIIVSQ*DNSITF Trigger: GAAGGTGATGCTGTTGTCTCACTGACTTACAATAAT...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCATTATTGTAAGTCAGTaGGACAACAGCATCACCTTC | + |
|
Preference number: 2 (lower is better) Translates to: TSWLSCQAGYSCLCSENVIIVSQ*DNSITF Trigger: GAAGGTGATGCTGTTGTCTCACTGACTTACAATAAT...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR-3UTR GCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCATCTGAGTTGAACAACTaGGCTCTGCTTTATCAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: PGYCTSEGIQAFACRVAASELNN*ALLYQF Trigger: AAACTGATAAAGCAGAGCGCAGTTGTTCAACTCAGA...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR GCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGAAAAGGGGAACTTTCTaGATGACCTCCTGGTTAAGC | + |
|
Preference number: 2 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGKRGTF*MTSWLS Trigger: GCTTAACCAGGAGGTCATGCAGAAAGTTCCCCTTTT...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR-3UTR GCA 90 bp | GCATTTGCTTGTAGAGTGGCAGCAGTTTGCAGAAAGGTAACGGACAGCATTATTCAAATGAGAGAACACTaGATAAGTGGGGGAGCCTAC | + |
|
Preference number: 2 (lower is better) Translates to: AFACRVAAVCRKVTDSIIQMREH*ISGGAY Trigger: GTAGGCTCCCCCACTTATGCAGTGTTCTCTCATTTG...AATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGCATTTGCTTGTAGAGTaGCAGCAGTTTGCAGAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGHLLVE*QQFAER Trigger: CCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATG...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CCA 90 bp | GCATTTGCTTGTAGAGTGGCAGCAGTTTGCAGAAAGGTAACGGACAGCATTATTCAAGATCGGCCTTGGTaGTTAGGGTTAGGAACTAAA | + |
|
Preference number: 2 (lower is better) Translates to: AFACRVAAVCRKVTDSIIQDRPW*LGLGTK Trigger: TTTAGTTCCTAACCCTAACCACCAAGGCCGATCTTG...AATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAGGCCACATGCAGATAGCTCACAATGATTCTGGAGCAGCTATGCAAGGAAAAAATGCAAGCATAGAATaGTCCTGGTTAATTAGGAGC | + |
|
Preference number: 2 (lower is better) Translates to: EGHMQIAHNDSGAAMQGKNASIE*SWLIRS Trigger: GCTCCTAATTAACCAGGATCATTCTATGCTTGCATT...TTTTCCTTGCATAGCTGCTCCAGAATCATTGTGAGCTATCTGCATGTGGCCTTC 43% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGTCTGCTGATTTTATTTaGCCACAGAAACTAAGGATT | + |
|
Preference number: 2 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGSADFI*PQKLRI Trigger: AATCCTTAGTTTCTGTGGCCAAATAAAATCAGCAGA...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR CAA 90 bp | AAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTTCATGCTaGTACACTCTATGTTGTTTATATGGGAGAAATGTTTTGTTATTT | + |
|
Preference number: 2 (lower is better) Translates to: KSTSVLFFPHPGCSC*YTLCCLYGRNVLLF Trigger: AAATAACAAAACATTTCTCCCATATAAACAACATAGAGTGTACAAGCATGAACATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | AGCCCGCCGGCTGACAAGTTGCAGGATGGCGGGGTTTaGGAATCCTTGGTCAGTGAGGTGCTGGTGTCATCT | + |
|
Preference number: 3 (lower is better) Translates to: SPPADKLQDGGV*ESLVSEVLVSS Trigger: AGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAGCCGGCGGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR TCA 72 bp | CAGGAGGGTCCTGAGGGGCTGGGGTACAGAGATCTGTaGGAGCTTTGTCGAGCAGTTCCTCATGGTGTGGTA | + |
|
Preference number: 3 (lower is better) Translates to: QEGPEGLGYRDL*ELCRAVPHGVV Trigger: TACCACACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCTCAGGACCCTCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CCA 72 bp | GCTGTCCAGAAAACAAATGAGAGAACACTGCATAAGTaGGGGAGCCTACCCTGCACCAGTGCCAGCCCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: AVQKTNERTLHK*GSLPCTSASPG Trigger: TCCTGGGCTGGCACTGGTGCAGGGTAGGCTCCCCCACTTATGCAGTGTTCTCTCATTTGTTTTCTGGACAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR GCA 72 bp | AATGAGAGAACACTGCATAAGTGGGGGAGCCTACCCTaGACCAGTGCCAGCCCAGGAAATGATAGCCAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: NERTLHKWGSLP*TSASPGNDSQS Trigger: ACTCTGGCTATCATTTCCTGGGCTGGCACTGGTGCAGGGTAGGCTCCCCCACTTATGCAGTGTTCTCTCATT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR CCA 72 bp | CAGACTCTGGTGATGGCAAAGTGTACTGCTGAGCTGTaGGGAATGACAGTCACTGCCAACAAACGTGCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: QTLVMAKCTAEL*GMTVTANKRAG Trigger: CCCAGCACGTTTGTTGGCAGTGACTGTCATTCCCCACAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCTCTGAGAATCTGACATaGCTCACCAGGGAAGATAGG | + |
|
Preference number: 3 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLSENLT*LTREDR Trigger: CCTATCTTCCCTGGTGAGCAATGTCAGATTCTCAGA...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR CCA 72 bp | CTGACAAGTTGCAGGATGGCGGGGTTTGAGAATCCTTaGTCAGTGAGGTGCTGGTGTCATCTGTTTCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: LTSCRMAGFENP*SVRCWCHLFLQ Trigger: CTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCATCCTGCAACTTGTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGCCACATGCAGATAGCTCACAATGATTCTGGAGCAGCTATGCAAGGAAAACACGCAGGTCCAGACTaGCCTTTCACAAGGACGCAG | + |
|
Preference number: 3 (lower is better) Translates to: EGHMQIAHNDSGAAMQGKHAGPD*PFTRTQ Trigger: CTGCGTCCTTGTGAAAGGCAAGTCTGGACCTGCGTG...TTTTCCTTGCATAGCTGCTCCAGAATCATTGTGAGCTATCTGCATGTGGCCTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCAGGAATATCATCCATaGAACCAAGGCTCTTATCTG | + |
|
Preference number: 3 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLQEYHP*NQGSYL Trigger: CAGATAAGAGCCTTGGTTCAATGGATGATATTCCTG...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR TCA 72 bp | ACGTTCAAGAGAAAGGACCAAAGGGAACGGGAAAGGTaGGTCCTGGTTACTGCACATCAGAAGGGATCCAGG | + |
|
Preference number: 3 (lower is better) Translates to: TFKRKDQRERER*VLVTAHQKGSR Trigger: CCTGGATCCCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCCGTTCCCTTTGGTCCTTTCTCTTGAACGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | TCGTCACTCAACAAGCAACAATCTATTCCCAGTGGATaGCAGCACCTAAGCATAGCCCACGCAGGTCCAGAC | + |
|
Preference number: 3 (lower is better) Translates to: SSLNKQQSIPSG*QHLSIAHAGPD Trigger: GTCTGGACCTGCGTGGGCTATGCTTAGGTGCTGTCATCCACTGGGAATAGATTGTTGCTTGTTGAGTGACGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR TCA 72 bp | ATACGCACAGACTCTGGTGATGGCAAAGTGTACTGCTaGGCTGTGGGGAATGACAGTCACTGCCAACAAACG | + |
|
Preference number: 3 (lower is better) Translates to: IRTDSGDGKVYC*AVGNDSHCQQT Trigger: CGTTTGTTGGCAGTGACTGTCATTCCCCACAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTGTGCGTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR TCA 72 bp | GTTGCAGGATGGCGGGGTTTGAGAATCCTTGGTCAGTaGGGTGCTGGTGTCATCTGTTTCTCCAGAAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VAGWRGLRILGQ*GAGVICFSRSE Trigger: TTCACTTCTGGAGAAACAGATGACACCAGCACCTCACTGACCAAGGATTCTCAAACCCCGCCATCCTGCAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR GCA 72 bp | TTATCAGTTTCCATCAGTCCTCAGCCCACTCAGACGTaGTGTAAAGGCCAACCACCTTTGTCCAGCCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: LSVSISPQPTQT*CKGQPPLSSPC Trigger: ACATGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACTGATGGAAACTGATAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | GGACCAAAGGGAACGGGAAAGGTGAGTCCTGGTTACTaGACATCAGAAGGGATCCAGGCATTTGCTTGTAGA | + |
|
Preference number: 3 (lower is better) Translates to: GPKGTGKVSPGY*TSEGIQAFACR Trigger: TCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCCGTTCCCTTTGGTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CCA 72 bp | AGAGAAAGGACCAAAGGGAACGGGAAAGGTGAGTCCTaGTTACTGCACATCAGAAGGGATCCAGGCATTTGC | + |
|
Preference number: 3 (lower is better) Translates to: RERTKGNGKGES*LLHIRRDPGIC Trigger: GCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGGACTCACCTTTCCCGTTCCCTTTGGTCCTTTCTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CCA 72 bp | AGAACAAATTGGTCAACCTCAGGGTATGGGGAGCCCTaGAAGCCTTCAATGGACTCCACTGAAGTGCCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: RTNWSTSGYGEP*KPSMDSTEVPV Trigger: TACTGGCACTTCAGTGGAGTCCATTGAAGGCTTCCAGGGCTCCCCATACCCTGAGGTTGACCAATTTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR TCA 72 bp | TTAAAGCAAGAAGCATTCTGGGCGCCGAAAACCACCTaGGAACCATCAACTATCAGCTGGGGAAGCTTCTCG | + |
|
Preference number: 3 (lower is better) Translates to: LKQEAFWAPKTT*EPSTISWGSFS Trigger: CGAGAAGCTTCCCCAGCTGATAGTTGATGGTTCTCAGGTGGTTTTCGGCGCCCAGAATGCTTCTTGCTTTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | TTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTaGGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRSCFIEMAGGS*GAGVQRSVRAL Trigger: CAAAGCTCTCACAGATCTCTGTACCCCAGCCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | CTGACAGCAGCGGCCTGTGGTGACAGTAGTGAGACCTaGTTATCAGGGTGTACTACCGTTTTGTCATTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: LTAAACGDSSET*LSGCTTVLSFK Trigger: TTTGAATGACAAAACGGTAGTACACCCTGATAAGCAGGTCTCACTACTGTCACCACAGGCCGCTGCTGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | GCGGTGTGTACTGTGCACAAGTCTGAGTTGAACAACTaGGCTCTGCTTTATCAGTTTCCATCAGTCCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: AVCTVHKSELNN*ALLYQFPSVLS Trigger: GCTGAGGACTGATGGAAACTGATAAAGCAGAGCGCAGTTGTTCAACTCAGACTTGTGCACAGTACACACCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | TCCCCATGGCTGTCACTGCTCACTGTGTGTCACAGTTaGGTTGAGCAGAAACCTAGGATCATTTACACGTTC | + |
|
Preference number: 3 (lower is better) Translates to: SPWLSLLTVCHS*VEQKPRIIYTF Trigger: GAACGTGTAAATGATCCTAGGTTTCTGCTCAACGCAACTGTGACACACAGTGAGCAGTGACAGCCATGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | GTAAGAATGCTGTCCAGAAAACAAATGAGAGAACACTaGATAAGTGGGGGAGCCTACCCTGCACCAGTGCCA | + |
|
Preference number: 3 (lower is better) Translates to: VRMLSRKQMREH*ISGGAYPAPVP Trigger: TGGCACTGGTGCAGGGTAGGCTCCCCCACTTATGCAGTGTTCTCTCATTTGTTTTCTGGACAGCATTCTTAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCGGGTGTACTACCGTTTaGTCATTCAAACTAAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAGCTTV*SFKLNY Trigger: GTAATTTAGTTTGAATGACAAAACGGTAGTACACCC...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CAA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCTTAGAAGCTGTTTCATaGAAATGGCAGGAGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: TSWLSCQAGYSCLCSENVLEAVS*KWQEGP Trigger: AGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAA...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | TCAGTGAGACAACAGCATCACCTTCTAGCTTCCTGCTaGAGGGAAGGAAGACTCGGTTACTCCTCAGATCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVRQQHHLLASC*REGRLGYSSDL Trigger: AAGATCTGAGGAGTAACCGAGTCTTCCTTCCCTTCAGCAGGAAGCTAGAAGGTGATGCTGTTGTCTCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CCA 72 bp | AGTTCGCCCAGGTCACACATCTTTCTCTCCAGGCTCTaGGACAGTTTTTCTGCTGATTTTATTTGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: SSPRSHIFLSRL*DSFSADFIWPQ Trigger: CTGTGGCCAAATAAAATCAGCAGAAAAACTGTCCCAGAGCCTGGAGAGAAAGATGTGTGACCTGGGCGAACT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | TCAGATCTTCTAGGCGGTGTGTACTGTGCACAAGTCTaGGTTGAACAACTGCGCTCTGCTTTATCAGTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: SDLLGGVYCAQV*VEQLRSALSVS Trigger: GGAAACTGATAAAGCAGAGCGCAGTTGTTCAACTCAGACTTGTGCACAGTACACACCGCCTAGAAGATCTGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR TCA 72 bp | GTACTGTTAAAACACTCAGCCCGCTTTCGTTTAGTCTaGGATGGGTGGCATGTGAGAACTCGCAGAGTATCT | + |
|
Preference number: 3 (lower is better) Translates to: VLLKHSARFRLV*DGWHVRTRRVS Trigger: AGATACTCTGCGAGTTCTCACATGCCACCCATCTCAGACTAAACGAAAGCGGGCTGAGTGTTTTAACAGTAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR GCA 72 bp | GGGATCCAGGCATTTGCTTGTAGAGTGGCAGCAGTTTaGAGAAAGGTAACGGACAGCATTATTGTAAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: GIQAFACRVAAV*RKVTDSIIVSQ Trigger: CTGACTTACAATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGCCTGGATCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCAGGGTGTACTACCGTTTaGTCATTCAAACTAAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: PGYCTSEGIQAFACRVAAGCTTV*SFKLNY Trigger: GTAATTTAGTTTGAATGACAAAACGGTAGTACACCC...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGTTAGAAGCTGTTTCATaGAAATGGCAGGAGGGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGLEAVS*KWQEGP Trigger: AGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAA...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CAA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGGGTAGATTTGAAGTTTaGTGCTTTACAGACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGGRFEV*CFTDRV Trigger: GACCCTGTCTGTAAAGCACAAAACTTCAAATCTACC...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 44% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR GCA 72 bp | ATGACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTaGCTATGCTCAGAAAATGTCAGCCAAATTTATATT | + |
|
Preference number: 3 (lower is better) Translates to: MTSWLSCQAGYS*LCSENVSQIYI Trigger: AATATAAATTTGGCTGACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGTCAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | GGACTCCACTTACTGTTGCTTCTTGGGCTCTTGCACTaGTTCAAGGAGGTAGTTAAGATTCAAACTTCGATT | + |
|
Preference number: 3 (lower is better) Translates to: GLHLLLLLGLLH*FKEVVKIQTSI Trigger: AATCGAAGTTTGAATCTTAACTACCTCCTTGAAGCAGTGCAAGAGCCCAAGAAGCAACAGTAAGTGGAGTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123328.2 |
||
| 3UTR CCA 72 bp | AAAAGAGAGCTGGTGGACAACTATCAAGATCGGCCTTaGTGGTTAGGGTTAGGAACTAAAAAGATAGCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: KRELVDNYQDRP*WLGLGTKKIAK Trigger: CTTTGCTATCTTTTTAGTTCCTAACCCTAACCACCAAGGCCGATCTTGATAGTTGTCCACCAGCTCTCTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGAGGAGATGGGCCAAAACCTGTTTCCTAATGATCCCAGAGCAACAAAAGAGAGGGTGTACTACCGTTTaGTCATTCAAACTAAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: ERRWAKTCFLMIPEQQKRGCTTV*SFKLNY Trigger: GTAATTTAGTTTGAATGACAAAACGGTAGTACACCC...TCTCTTTTGTTGCTCTGGGATCATTAGGAAACAGGTTTTGGCCCATCTCCTCTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | ACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTTCATaGTTGTACACTCTATGTTGTTTATATGGGAGAAAT | + |
|
Preference number: 3 (lower is better) Translates to: TSVLFFPHPGCS*LYTLCCLYGRN Trigger: ATTTCTCCCATATAAACAACATAGAGTGTACAAGCATGAACATCCTGGGTGAGGGAAGAACAGAACAGAAGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | TGTGGGCTCTTCCAATGTTTTCACACCAGCGGTATTTaGATATATCATAAACCAGTAATTCTTCCGGGAAAA | + |
|
Preference number: 3 (lower is better) Translates to: CGLFQCFHTSGI*IYHKPVILPGK Trigger: TTTTCCCGGAAGAATTACTGGTTTATGATATATGCAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGACATTGCTCACCAGGGAAGATAGGAAATACTGGTTTTCCTCAGAAATATCTGCATGTTTCCACAATTaGTTTTATGTCAGCAGACAA | + |
|
Preference number: 3 (lower is better) Translates to: LTLLTREDRKYWFSSEISACFHN*FYVSRQ Trigger: TTGTCTGCTGACATAAAACAAATTGTGGAAACATGC...AGATATTTCTGAGGAAAACCAGTATTTCCTATCTTCCCTGGTGAGCAATGTCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR GCA 72 bp | CTATGCTCAGAAAATGTCAGCCAAATTTATATTGACTaGAGTAGTTCCCAGGACTTGAGTAATTTGGTGGAT | + |
|
Preference number: 3 (lower is better) Translates to: LCSENVSQIYID*SSSQDLSNLVD Trigger: ATCCACCAAATTACTCAAGTCCTGGGAACTACTGCAGTCAATATAAATTTGGCTGACATTTTCTGAGCATAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR GCA 72 bp | CCACAATTTGTTTTATGTCAGCAGACAATACTTTCCTaGAAAATTGCTAGGAAAGATGAGTATTTCCCATGC | + |
|
Preference number: 3 (lower is better) Translates to: PQFVLCQQTILS*KIARKDEYFPC Trigger: GCATGGGAAATACTCATCTTTCCTAGCAATTTTGCAGGAAAGTATTGTCTGCTGACATAAAACAAATTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR CCA 72 bp | TTCAGATCAACCAGAATCATTATATTATTACTCTTGTaGGCTCTTCCAATGTTTTCACACCAGCGGTATTTG | + |
|
Preference number: 3 (lower is better) Translates to: FRSTRIIILLLL*ALPMFSHQRYL Trigger: CAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTAATAATATAATGATTCTGGTTGATCTGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR CCA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGAAACCGGAGGCGTCCTaGCCCACCGCCTCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMKPEAS*PTASGT Trigger: GGTCCCAGAGGCGGTGGGCCAGGACGCCTCCGGTTT...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCAAACCGGAGGCGTCCTaGCCCACCGCCTCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLKPEAS*PTASGT Trigger: GGTCCCAGAGGCGGTGGGCCAGGACGCCTCCGGTTT...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCAAACCGGAGGCGTCCTaGCCCACCGCCTCTGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: TSWLSCQAGYSCLCSENVKPEAS*PTASGT Trigger: GGTCCCAGAGGCGGTGGGCCAGGACGCCTCCGGTTT...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GTGCGAGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCGGAGGATGGTTCTTCTaGCTTGGCCAGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VRGEPGHQVHFCSVLPSPGGWFF*LGQSWS Trigger: AGACCAAGACTGGCCAAGCCAGAAGAACCATCCTCC...GGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCTCGCAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GTGCGAGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCCCTGGAAGCCTTCAATaGACTCCACTGAAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VRGEPGHQVHFCSVLPSPPGSLQ*TPLKCQ Trigger: CTGGCACTTCAGTGGAGTCCATTGAAGGCTTCCAGG...GGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCTCGCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGTGCTGGAATCCAGGTTaGAAACATCTTCGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GLRTEPPAAFSAPEAMLLCWNPG*KHLRLS Trigger: GCTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCA...CAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATCGCTTTCGTTTAGTCTaGGATGGGTGGCATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRARPPSPLLFCSSLTQDRFRLV*DGWHVR Trigger: TCTCACATGCCACCCATCTCAGACTAAACGAAAGCG...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCAGAATCCTTGGTCAGTaGGGTGCTGGTGTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGLRTEPPAAFSAPEARILGQ*GAGVIC Trigger: ACAGATGACACCAGCACCTCACTGACCAAGGATTCT...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCTGGCTTGGCCAGTCTTaGTCTGTACACGGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLWLGQS*SVHGRQ Trigger: TTGTCTTCCGTGTACAGACCAAGACTGGCCAAGCCA...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGGGAGGATGGTTCTTCTaGCTTGGCCAGTCTTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RGWGTEICESFVEQFLMVGGWFF*LGQSWS Trigger: AGACCAAGACTGGCCAAGCCAGAAGAACCATCCTCC...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATCTTCCAAATGGAGGATaGTTCTTCTGGCTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RRARPPSPLLFCSSLTQDLPNGG*FFWLGQ Trigger: CTGGCCAAGCCAGAAGAACCATCCTCCATTTGGAAG...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGCCTGGAAGCCTTCAATaGACTCCACTGAAGTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RGWGTEICESFVEQFLMVPGSLQ*TPLKCQ Trigger: CTGGCACTTCAGTGGAGTCCATTGAAGGCTTCCAGG...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCGAGTATCTGAGAATCTaGCATTGCTCACCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAEYLRI*HCSPGK Trigger: CTTCCCTGGTGAGCAATGTCAGATTCTCAGATACTC...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGTGGCTTGGCCAGTCTTaGTCTGTACACGGAAGACAA | + |
|
Preference number: 4 (lower is better) Translates to: RGWGTEICESFVEQFLMVWLGQS*SVHGRQ Trigger: TTGTCTTCCGTGTACAGACCAAGACTGGCCAAGCCA...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | GGAGCCCTGGAAGCCTTCAATGGACTCCACTTACTGTaGCTTCTTGGGCTCTTGCACTGCTTCAAGGAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GALEAFNGLHLL*LLGLLHCFKEV Trigger: TACCTCCTTGAAGCAGTGCAAGAGCCCAAGAAGCAACAGTAAGTGGAGTCCATTGAAGGCTTCCAGGGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123328.2 |
||
| CDS-3UTR GCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCAATCTGCTTCACCCTTaGCTCCCATTTCCTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGLRTEPPAAFSAPEANLLHP*LPFPQH Trigger: ATGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATT...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGGGGTCATGGCATTTCTaGTACCAAACTTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GLRTEPPAAFSAPEAMLLGSWHF*YQTSFF Trigger: GAAGAATGAAGTTTGGTATCAGAAATGCCATGACCC...CAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCAAGAATCCTTGGTCAGTaGGGTGCTGGTGTCATCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PGYCTSEGIQAFACRVAARILGQ*GAGVIC Trigger: ACAGATGACACCAGCACCTCACTGACCAAGGATTCT...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATAGGAATATCATCCATTaGACCAAGGCTCTTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: RRARPPSPLLFCSSLTQDRNIIH*TKALIC Trigger: GCAGATAAGAGCCTTGGTTCAATGGATGATATTCCT...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCAGGAATATCATCCATTaGACCAAGGCTCTTATCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLRNIIH*TKALIC Trigger: GCAGATAAGAGCCTTGGTTCAATGGATGATATTCCT...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGAATCTGCTTCACCCTTaGCTCCCATTTCCTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RGWGTEICESFVEQFLMVNLLHP*LPFPQH Trigger: ATGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATT...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGGAAATAGCTTCCAAATaGAGGATGGTTCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRTEPPAAFSAPEAMLLEIASK*RMVLLA Trigger: AGCCAGAAGAACCATCCTCCATTTGGAAGCTATTTC...CAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | TGTCCAGCCCATGTTCATACTTTAGAAGCTGTTTCATaGAAATGGCAGGAGGGTCCTGAGGGGCTGGGGTAC | + |
|
Preference number: 4 (lower is better) Translates to: CPAHVHTLEAVS*KWQEGPEGLGY Trigger: GTACCCCAGCCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATGGGCTGGACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGTACAAACATGCTGTATaGGCAATGCAACCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GLRTEPPAAFSAPEAMLLYKHAV*AMQPSS Trigger: AGATGATGGTTGCATTGCTCATACAGCATGTTTGTA...CAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCTACAAACATGCTGTATaGGCAATGCAACCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAYKHAV*AMQPSS Trigger: AGATGATGGTTGCATTGCTCATACAGCATGTTTGTA...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCGAGTATCTGAGAATCTaGCATTGCTCACCAGGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: TSWLSCQAGYSCLCSENVEYLRI*HCSPGK Trigger: CTTCCCTGGTGAGCAATGTCAGATTCTCAGATACTC...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | CAATGGACTCCACTTACTGTTGCTTCTTGGGCTCTTGCACTGCTTCAAGGAGGTCGCTTTCGTTTAGTCTaGGATGGGTGGCATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: QWTPLTVASWALALLQGGRFRLV*DGWHVR Trigger: TCTCACATGCCACCCATCTCAGACTAAACGAAAGCG...ACCTCCTTGAAGCAGTGCAAGAGCCCAAGAAGCAACAGTAAGTGGAGTCCATTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123328.2 |
||
| CDS-3UTR TCA 90 bp | AGGGGCTGGGGTACAGAGATCTGTGAGAGCTTTGTCGAGCAGTTCCTCATGGTGGGGTCATGGCATTTCTaGTACCAAACTTCATTCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RGWGTEICESFVEQFLMVGSWHF*YQTSFF Trigger: GAAGAATGAAGTTTGGTATCAGAAATGCCATGACCC...CACCATGAGGAACTGCTCGACAAAGCTCTCACAGATCTCTGTACCCCAGCCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCTGCTGTTTCTCCAGAAGTaGAGTCTTCATCTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: GLRTEPPAAFSAPEAMLLLFLQK*SLHLSE Trigger: TTCTGAAAGATGAAGACTTCACTTCTGGAGAAACAG...CAGGAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCAGTACACGGAAGACAATaGCTTCCTCTCATAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGYCTSEGIQAFACRVAAVHGRQ*LPLIVG Trigger: TCCCACTATGAGAGGAAGCCATTGTCTTCCGTGTAC...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | CAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTaGTCCAGCCCATGTTCATACTTTAGAAGCTGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: QPTQTCCKGQPP*SSPCSYFRSCF Trigger: GAAACAGCTTCTAAAGTATGAACATGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TCCTCATGGTGTGGTATTAGCAGTTATGTTCTGAGAGGAGAGGAGATGGGCCAATGCTGGAATCCAGGTTaGAAACATCTTCGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SSWCGISSYVLRGEEMGQCWNPG*KHLRLS Trigger: GCTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCA...TTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCACACCAGCGGTATTTaGATATATCATAAACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLHTSGI*IYHKPV Trigger: TACTGGTTTATGATATATGCAAATACCGCTGGTGTG...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | GCTCACAATGATTCTGGAGCAGCTATGCAAGGAAAAGCAAACAGAAGAGCGGGACTTCCAAATGGAGGATaGTTCTTCTGGCTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: AHNDSGAAMQGKANRRAGLPNGG*FFWLGQ Trigger: CTGGCCAAGCCAGAAGAACCATCCTCCATTTGGAAG...TCCCGCTCTTCTGTTTGCTTTTCCTTGCATAGCTGCTCCAGAATCATTGTGAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR CCA 90 bp | CCTGGTTACTGCACATCAGAAGGGATCCAGGCATTTGCTTGTAGAGTGGCAGCACTTCCCATCAGCTCCTaGGTTGGCCAATTTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGYCTSEGIQAFACRVAALPISS*VGQFVK Trigger: TTTAACAAATTGGCCAACCCAGGAGCTGATGGGAAG...TGCTGCCACTCTACAAGCAAATGCCTGGATCCCTTCTGATGTGCAGTAACCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCCACACTTTCCTATTTTaGATGACTGATACAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAHTFLF*MTDTVE Trigger: TTCGACTGTATCAGTCATCCAAAATAGGAAAGTGTG...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | AGTCCTCAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTTGTCCAGCCCAGTAAAACTCCTCAAGTaGTTTACAAACATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SPQPTQTCCKGQPPLSSPVKLLK*FTNMLY Trigger: ATACAGCATGTTTGTAAAGCACTTGAGGAGTTTTAC...TGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGGTACACGGAAGACAATaGCTTCCTCTCATAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGVHGRQ*LPLIVG Trigger: TCCCACTATGAGAGGAAGCCATTGTCTTCCGTGTAC...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | TTTGTCATCTGTGAGGCATGTCCCCATGGCTGTCACTGCTCACTGTGTGTCACACACACTTTCCTATTTTaGATGACTGATACAGTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FVICEACPHGCHCSLCVTHTFLF*MTDTVE Trigger: TTCGACTGTATCAGTCATCCAAAATAGGAAAGTGTG...TGTGACACACAGTGAGCAGTGACAGCCATGGGGACATGCCTCACAGATGACAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGGGGTATGGGGAGCCCTaGAAGCCTTCAATGGACTCC | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTGYGEP*KPSMDS Trigger: GGAGTCCATTGAAGGCTTCCAGGGCTCCCCATACCC...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TTGCTTCTTGGGCTCTTGCACTGCTTCAAGGAGGTAGTTAAGATTCAAACTTCGGAGTATCTGAGAATCTaGCATTGCTCACCAGGGAAN | + |
|
Preference number: 4 (lower is better) Translates to: LLLGLLHCFKEVVKIQTSEYLRI*HCSPGX Trigger: NTTCCCTGGTGAGCAATGTCAGATTCTCAGATACTC...CGAAGTTTGAATCTTAACTACCTCCTTGAAGCAGTGCAAGAGCCCAAGAAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123328.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATGCAAGGAAAAGCAAACAGAAGAGCGGGACAAAGTGCCAGAAATAAAAGTACACGGAAGACAATaGCTTCCTCTCATAGTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QLCKEKQTEERDKVPEIKVHGRQ*LPLIVG Trigger: TCCCACTATGAGAGGAAGCCATTGTCTTCCGTGTAC...TTTTATTTCTGGCACTTTGTCCCGCTCTTCTGTTTGCTTTTCCTTGCATAGCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR CCA 90 bp | GCATTTGCTTGTAGAGTGGCAGCAGTTTGCAGAAAGGTAACGGACAGCATTATTGAAATAGCTTCCAAATaGAGGATGGTTCTTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AFACRVAAVCRKVTDSIIEIASK*RMVLLA Trigger: AGCCAGAAGAACCATCCTCCATTTGGAAGCTATTTC...AATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | CAGCTATGCAAGGAAAAGCAAACAGAAGAGCGGGACAAAGTGCCAGAAATAAAACTTCCCATCAGCTCCTaGGTTGGCCAATTTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: QLCKEKQTEERDKVPEIKLPISS*VGQFVK Trigger: TTTAACAAATTGGCCAACCCAGGAGCTGATGGGAAG...TTTTATTTCTGGCACTTTGTCCCGCTCTTCTGTTTGCTTTTCCTTGCATAGCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| 3UTR CAA 72 bp | TATATTGACTGCAGTAGTTCCCAGGACTTGAGTAATTaGGTGGATTTTGTCATCTGTGAGGCATGTCCCCAT | + |
|
Preference number: 4 (lower is better) Translates to: YIDCSSSQDLSN*VDFVICEACPH Trigger: ATGGGGACATGCCTCACAGATGACAAAATCCACCAAATTACTCAAGTCCTGGGAACTACTGCAGTCAATATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | AGACTTACTTCAGTGGGTAATGGGGAACAGGTAGATTaGAAGTTTTGTGCTTTACAGACAGGGTCATGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: RLTSVGNGEQVD*KFCALQTGSWH Trigger: ATGCCATGACCCTGTCTGTAAAGCACAAAACTTCAAATCTACCTGTTCCCCATTACCCACTGAAGTAAGTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGCGCTTTCGTTTAGTCTaGGATGGGTGGCATGTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTRFRLV*DGWHVR Trigger: TCTCACATGCCACCCATCTCAGACTAAACGAAAGCG...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | TCCTCATGGTGTGGTATTAGCAGTTATGTTCTGAGAGGAGAGGAGATGGGCCAAAATCAAAATAAAGCTTaGACACAGCATTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSWCGISSYVLRGEEMGQNQNKA*TQHSQE Trigger: TTCCTGAGAATGCTGTGTGCAAGCTTTATTTTGATT...TTGGCCCATCTCCTCTCCTCTCAGAACATAACTGCTAATACCACACCATGAGGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGCTATGCAAGGAAAAGCAAACAGAAGAGCGGGACAAAGTGCCAGAAATAATCAAAATAAAGCTTaGACACAGCATTCTCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GAAMQGKANRRAGQSARNNQNKA*TQHSQE Trigger: TTCCTGAGAATGCTGTGTGCAAGCTTTATTTTGATT...ATTTCTGGCACTTTGTCCCGCTCTTCTGTTTGCTTTTCCTTGCATAGCTGCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR GCA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGAGATTTGAAGTTTTGTaGTTTACAGACAGGGTCATG | + |
|
Preference number: 4 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGRFEVL*FTDRVM Trigger: CATGACCCTGTCTGTAAAGCACAAAACTTCAAATCT...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGCTTCCAAATGGAGGATaGTTCTTCTGGCTTGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTLPNGG*FFWLGQ Trigger: CTGGCCAAGCCAGAAGAACCATCCTCCATTTGGAAG...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | GCATTTGCTTGTAGAGTGGCAGCAGTTTGCAGAAAGGTAACGGACAGCATTATTCTTTCCTATTTTGGATaGCTGATACAGTCGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: AFACRVAAVCRKVTDSIILSYFG*LIQSKV Trigger: AACTTTCGACTGTATCAGTCATCCAAAATAGGAAAG...AATAATGCTGTCCGTTACCTTTCTGCAAACTGCTGCCACTCTACAAGCAAATGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGAATCTGCTTCACCCTTaGCTCCCATTTCCTCAACAT | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTNLLHP*LPFPQH Trigger: ATGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATT...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGCTTCCCATCAGCTCCTaGGTTGGCCAATTTGTTAAA | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTLPISS*VGQFVK Trigger: TTTAACAAATTGGCCAACCCAGGAGCTGATGGGAAG...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | TCTGTTCTGTTCTTCCCTCACCCAGGATGTTCATGCTaGTACACTCTATGTTGTTTATATGGGAGAAATGTT | + |
|
Preference number: 4 (lower is better) Translates to: SVLFFPHPGCSC*YTLCCLYGRNV Trigger: AACATTTCTCCCATATAAACAACATAGAGTGTACAAGCATGAACATCCTGGGTGAGGGAAGAACAGAACAGA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCCCGGCACTAATTTAACATTTATGTTATCAAATCTCAGGCTTCAGGCACTGTTTCTCCAGAAGTaGAGTCTTCATCTTTCAGAA | + |
|
Preference number: 4 (lower is better) Translates to: YSPGTNLTFMLSNLRLQALFLQK*SLHLSE Trigger: TTCTGAAAGATGAAGACTTCACTTCTGGAGAAACAG...TGCCTGAAGCCTGAGATTTGATAACATAAATGTTAAATTAGTGCCGGGACTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | AGTAGTGAGACCTGCTTATCAGGGTGTACTACCGTTTaGTCATTCAAACTAAATTACACCAATTCAGTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSETCLSGCTTV*SFKLNYTNSVV Trigger: GACAACTGAATTGGTGTAATTTAGTTTGAATGACAAAACGGTAGTACACCCTGATAAGCAGGTCTCACTACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGTACAAACATGCTGTATaGGCAATGCAACCATCATCT | + |
|
Preference number: 4 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTYKHAV*AMQPSS Trigger: AGATGATGGTTGCATTGCTCATACAGCATGTTTGTA...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR TCA 90 bp | TACAGTCCCGGCACTAATTTAACATTTATGTTATCAAATCTCAGGCTTCAGGCACTTTCCTATTTTGGATaGCTGATACAGTCGAAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: YSPGTNLTFMLSNLRLQALSYFG*LIQSKV Trigger: AACTTTCGACTGTATCAGTCATCCAAAATAGGAAAG...TGCCTGAAGCCTGAGATTTGATAACATAAATGTTAAATTAGTGCCGGGACTGTA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR GCA 90 bp | ATTACTCTTGTGGGCTCTTCCAATGTTTTCACACCAGCGGTATTTGCATATATCGTAAAACTCCTCAAGTaGTTTACAAACATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: ITLVGSSNVFTPAVFAYIVKLLK*FTNMLY Trigger: ATACAGCATGTTTGTAAAGCACTTGAGGAGTTTTAC...GATATATGCAAATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTCCCGGCACTAATTTAACATTTATGTTATCAAATCTCAGGCTTCAGGCACACACCAGCGGTATTTaGATATATCATAAACCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: YSPGTNLTFMLSNLRLQAHTSGI*IYHKPV Trigger: TACTGGTTTATGATATATGCAAATACCGCTGGTGTG...TGCCTGAAGCCTGAGATTTGATAACATAAATGTTAAATTAGTGCCGGGACTGTA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| 3UTR CAA 72 bp | TTCTTCAGATCAACCAGAATCATTATATTATTACTCTaGTGGGCTCTTCCAATGTTTTCACACCAGCGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: FFRSTRIIILLL*WALPMFSHQRY Trigger: ATACCGCTGGTGTGAAAACATTGGAAGAGCCCACAAGAGTAATAATATAATGATTCTGGTTGATCTGAAGAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
||
| CDS-3UTR GCA 90 bp | TACAGTCCCGGCACTAATTTAACATTTATGTTATCAAATCTCAGGCTTCAGGCAGTAAAACTCCTCAAGTaGTTTACAAACATGCTGTAT | + |
|
Preference number: 4 (lower is better) Translates to: YSPGTNLTFMLSNLRLQAVKLLK*FTNMLY Trigger: ATACAGCATGTTTGTAAAGCACTTGAGGAGTTTTAC...TGCCTGAAGCCTGAGATTTGATAACATAAATGTTAAATTAGTGCCGGGACTGTA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATCAATCTGCTTCACCCTaGCCTCCCATTTCCTCAACA | + |
|
Preference number: 5 (lower is better) Translates to: RRARPPSPLLFCSSLTQDQSASP*PPISST Trigger: TGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATTG...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CAA 90 bp | AGGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTGCTGGAATCCAGGTaGAAAACATCTTCGGCTGAG | + |
|
Preference number: 5 (lower is better) Translates to: RRARPPSPLLFCSSLTQDVLESR*KTSSAE Trigger: CTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCAC...ATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS-3UTR CAA 90 bp | GGCGAGCCAGGCCACCAAGTCCACTTCTGTTCTGTTCTTCCCTCACCCAGGATGTCTGAGAATCTGACATaGCTCACCAGGGAAGATAGG | + |
|
Preference number: 5 (lower is better) Translates to: GEPGHQVHFCSVLPSPRMSENLT*LTREDR Trigger: CCTATCTTCCCTGGTGAGCAATGTCAGATTCTCAGA...CATCCTGGGTGAGGGAAGAACAGAACAGAAGTGGACTTGGTGGCCTGGCTCGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
||
| CDS CCA 90 bp | TGGTTCTTCTGGCTTGGCCAGTCTTGGTCTGTACACGGAAGACAATaGCTTCCTCTCATAGTGGGATGCCCGCTCTTCAATCTGCTTCAC | + |
|
Preference number: 5 (lower is better) Translates to: WFFWLGQSWSVHGRQ*LPLIVGCPLFNLLH Trigger: GTGAAGCAGATTGAAGAGCGGGCATCCCACTATGAGAGGAAGCCATTGTCTTCCGTGTACAGACCAAGACTGGCCAAGCCAGAAGAACCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
||
| CDS-3UTR CAA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCGATGGTTCTTCTGGCTaGGCCAGTCTTGGTCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: TSWLSCQAGYSCLCSENVDGSSG*ASLGLY Trigger: GTACAGACCAAGACTGGCCAAGCCAGAAGAACCATC...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCCCATCAGCTCCTGGGTaGGCCAATTTGTTAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLPSAPG*ANLLNS Trigger: AGAATTTAACAAATTGGCCAACCCAGGAGCTGATGG...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| CDS CCA 90 bp | GAAATCTCTTGTTTTAATGGTGTAACAGAAAAACCGGAGGCGTCCTaGCCCACCGCCTCTGGGACCTTAGCTTCATCATCCTCGGCAATC | + |
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Preference number: 5 (lower is better) Translates to: EISCFNGVTEKPEAS*PTASGTLASSSSAI Trigger: GATTGCCGAGGATGATGAAGCTAAGGTCCCAGAGGCGGTGGGCCAGGACGCCTCCGGTTTTTCTGTTACACCATTAAAACAAGAGATTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCCAATCTGCTTCACCCTaGCCTCCCATTTCCTCAACA | + |
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Preference number: 5 (lower is better) Translates to: TSWLSCQAGYSCLCSENVQSASP*PPISST Trigger: TGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATTG...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | CAGAGTCTGAAATACGCACAGACTCTGGTGATGGCAAAGTGTACTGCTGAGCTGGATGGTTCTTCTGGCTaGGCCAGTCTTGGTCTGTAC | + |
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Preference number: 5 (lower is better) Translates to: QSLKYAQTLVMAKCTAELDGSSG*ASLGLY Trigger: GTACAGACCAAGACTGGCCAAGCCAGAAGAACCATC...CAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTGTGCGTATTTCAGACTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| CDS-3UTR CAA 90 bp | ACCTCCTGGTTAAGCTGTCAGGCTGGCTACTCCTGCCTATGCTCAGAAAATGTCGTGCTGGAATCCAGGTaGAAAACATCTTCGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: TSWLSCQAGYSCLCSENVVLESR*KTSSAE Trigger: CTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCAC...GACATTTTCTGAGCATAGGCAGGAGTAGCCAGCCTGACAGCTTAACCAGGAGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCGGTAGATTTGAAGTTTaGTGCTTTACAGACAGGGTC | + |
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Preference number: 5 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLGRFEV*CFTDRV Trigger: GACCCTGTCTGTAAAGCACAAAACTTCAAATCTACC...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCGGGGAACAGGTAGATTaGAAGTTTTGTGCTTTACAG | + |
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Preference number: 5 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLGEQVD*KFCALQ Trigger: CTGTAAAGCACAAAACTTCAAATCTACCTGTTCCCC...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | TCTCGAGCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCCAGGAATATCATCCATaGAACCAAGGCTCTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: SRAGLRTEPPAAFSAPEAQEYHP*NQGSYL Trigger: CAGATAAGAGCCTTGGTTCAATGGATGATATTCCTG...GGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGCTCGAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GCTGGACTGAGAACTGAGCCTCCTGCTGCCTTTTCTGCTCCTGAAGCCATGCTCTACAAGGTAAATACGTaGTCCATTTCCCCTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: AGLRTEPPAAFSAPEAMLYKVNT*SISPFA Trigger: TGCAAAAGGGGAAATGGACAACGTATTTACCTTGTA...GAGCATGGCTTCAGGAGCAGAAAAGGCAGCAGGAGGCTCAGTTCTCAGTCCAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | AGTCCTCAGCCCACTCAGACGTGCTGTAAAGGCCAACCACCTTTGTCCAGCCCATACAAGGTAAATACGTaGTCCATTTCCCCTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: SPQPTQTCCKGQPPLSSPYKVNT*SISPFA Trigger: TGCAAAAGGGGAAATGGACAACGTATTTACCTTGTA...TGGGCTGGACAAAGGTGGTTGGCCTTTACAGCACGTCTGAGTGGGCTGAGGACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GAAGGCCACATGCAGATAGCTCACAATGATTCTGGAGCAGCTATGCAAGGAAAACAATCTGCTTCACCCTaGCCTCCCATTTCCTCAACA | + |
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Preference number: 5 (lower is better) Translates to: EGHMQIAHNDSGAAMQGKQSASP*PPISST Trigger: TGTTGAGGAAATGGGAGGCAAGGGTGAAGCAGATTG...TTTTCCTTGCATAGCTGCTCCAGAATCATTGTGAGCTATCTGCATGTGGCCTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| CDS-3UTR CAA 90 bp | CAGAGTCTGAAATACGCACAGACTCTGGTGATGGCAAAGTGTACTGCTGAGCTGCCATCAGCTCCTGGGTaGGCCAATTTGTTAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: QSLKYAQTLVMAKCTAELPSAPG*ANLLNS Trigger: AGAATTTAACAAATTGGCCAACCCAGGAGCTGATGG...CAGCTCAGCAGTACACTTTGCCATCACCAGAGTCTGTGCGTATTTCAGACTCTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| CDS-3UTR CAA 90 bp | TTTGTCATCTGTGAGGCATGTCCCCATGGCTGTCACTGCTCACTGTGTGTCACACAGGAATATCATCCATaGAACCAAGGCTCTTATCTG | + |
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Preference number: 5 (lower is better) Translates to: FVICEACPHGCHCSLCVTQEYHP*NQGSYL Trigger: CAGATAAGAGCCTTGGTTCAATGGATGATATTCCTG...TGTGACACACAGTGAGCAGTGACAGCCATGGGGACATGCCTCACAGATGACAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | GAGAGGAGATGGGCCAAAACCTGTTTCCTAATGATCCCAGAGCAACAAAAGAGACCATCAGCTCCTGGGTaGGCCAATTTGTTAAATTCT | + |
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Preference number: 5 (lower is better) Translates to: ERRWAKTCFLMIPEQQKRPSAPG*ANLLNS Trigger: AGAATTTAACAAATTGGCCAACCCAGGAGCTGATGG...TCTCTTTTGTTGCTCTGGGATCATTAGGAAACAGGTTTTGGCCCATCTCCTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | CTGACATTGCTCACCAGGGAAGATAGGAAATACTGGTTTTCCTCAGAAATATCTGTGCTGGAATCCAGGTaGAAAACATCTTCGGCTGAG | + |
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Preference number: 5 (lower is better) Translates to: LTLLTREDRKYWFSSEISVLESR*KTSSAE Trigger: CTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCAC...AGATATTTCTGAGGAAAACCAGTATTTCCTATCTTCCCTGGTGAGCAATGTCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000136335.8 |
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| CDS-3UTR CAA 90 bp | CATGTTCATACTTTAGAAGCTGTTTCATTGAAATGGCAGGAGGGTCCTGAGGGGGGGGAACAGGTAGATTaGAAGTTTTGTGCTTTACAG | + |
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Preference number: 5 (lower is better) Translates to: HVHTLEAVSLKWQEGPEGGEQVD*KFCALQ Trigger: CTGTAAAGCACAAAACTTCAAATCTACCTGTTCCCC...CCCCTCAGGACCCTCCTGCCATTTCAATGAAACAGCTTCTAAAGTATGAACATG 44% GC, longest homopolymer 8 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000040468.16 ENSMUST00000211400.2 |
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| CDS GCA 90 bp | ATTGTAAAACTCCTCAAGTGCTTTACAAACATGCTGTATGAGCAATaGAACCATCATCTTCCCATCAGCTCCTGGGTTGGCCAATTTGTT | + |
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Preference number: 5 (lower is better) Translates to: IVKLLKCFTNMLYEQ*NHHLPISSWVGQFV Trigger: AACAAATTGGCCAACCCAGGAGCTGATGGGAAGATGATGGTTGCATTGCTCATACAGCATGTTTGTAAAGCACTTGAGGAGTTTTACAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS TCA 90 bp | AAATTTCTCTTCAGTGCTGGAATCCAGGTTGAAAACATCTTCGGCTaGGCACTGAACATTGTAAAACTCCTCAAGTGCTTTACAAACATG | + |
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Preference number: 5 (lower is better) Translates to: KFLFSAGIQVENIFG*ALNIVKLLKCFTNM Trigger: CATGTTTGTAAAGCACTTGAGGAGTTTTACAATGTTCAGTGCTCAGCCGAAGATGTTTTCAACCTGGATTCCAGCACTGAAGAGAAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS TCA 90 bp | AAATTACCAGCATGCCTGTTATCTTTAAATGCCACATTGTGGAGCTaGAATATTAGGTGTCGGCTAAATTTCTCTTCAGTGCTGGAATCC | + |
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Preference number: 5 (lower is better) Translates to: KLPACLLSLNATLWS*NIRCRLNFSSVLES Trigger: GGATTCCAGCACTGAAGAGAAATTTAGCCGACACCTAATATTTCAGCTCCACAATGTGGCATTTAAAGATAACAGGCATGCTGGTAATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS-3UTR CAA 90 bp | ATGTCAAAGGTAGTCTTCAATAAATCTGGCTTAGGTAAACCAAGTGATAGAACGTACAAGGTAAATACGTaGTCCATTTCCCCTTTTGCA | + |
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Preference number: 5 (lower is better) Translates to: MSKVVFNKSGLGKPSDRTYKVNT*SISPFA Trigger: TGCAAAAGGGGAAATGGACAACGTATTTACCTTGTA...CGTTCTATCACTTGGTTTACCTAAGCCAGATTTATTGAAGACTACCTTTGACAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000211400.2 |
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| CDS CCA 72 bp | TGGCTTGGCCAGTCTTGGTCTGTACACGGAAGACAATaGCTTCCTCTCATAGTGGGATGCCCGCTCTTCAAT | + |
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Preference number: 6 (lower is better) Translates to: WLGQSWSVHGRQ*LPLIVGCPLFN Trigger: ATTGAAGAGCGGGCATCCCACTATGAGAGGAAGCCATTGTCTTCCGTGTACAGACCAAGACTGGCCAAGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS CCA 72 bp | TGTTTTAATGGTGTAACAGAAAAACCGGAGGCGTCCTaGCCCACCGCCTCTGGGACCTTAGCTTCATCATCC | + |
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Preference number: 6 (lower is better) Translates to: CFNGVTEKPEAS*PTASGTLASSS Trigger: GGATGATGAAGCTAAGGTCCCAGAGGCGGTGGGCCAGGACGCCTCCGGTTTTTCTGTTACACCATTAAAACA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS CAA 72 bp | TCCAAATGGAGGATGGTTCTTCTGGCTTGGCCAGTCTaGGTCTGTACACGGAAGACAATGGCTTCCTCTCAT | + |
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Preference number: 6 (lower is better) Translates to: SKWRMVLLAWPV*VCTRKTMASSH Trigger: ATGAGAGGAAGCCATTGTCTTCCGTGTACAGACCAAGACTGGCCAAGCCAGAAGAACCATCCTCCATTTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS GCA 72 bp | CTCCTCAAGTGCTTTACAAACATGCTGTATGAGCAATaGAACCATCATCTTCCCATCAGCTCCTGGGTTGGC | + |
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Preference number: 6 (lower is better) Translates to: LLKCFTNMLYEQ*NHHLPISSWVG Trigger: GCCAACCCAGGAGCTGATGGGAAGATGATGGTTGCATTGCTCATACAGCATGTTTGTAAAGCACTTGAGGAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS CAA 72 bp | CCAAAGTTGGGCATAGGACGTTACAAGGTAAATACGTaGTCCATTTCCCCTTTTGCACTCCAAAGCAAATAC | + |
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Preference number: 6 (lower is better) Translates to: PKLGIGRYKVNT*SISPFALQSKY Trigger: GTATTTGCTTTGGAGTGCAAAAGGGGAAATGGACAACGTATTTACCTTGTAACGTCCTATGCCCAACTTTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS CAA 72 bp | CAAGAGGGTTTTCCGGGTCTTATAGTAAAACCAAAGTaGGGCATAGGACGTTACAAGGTAAATACGTTGTCC | + |
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Preference number: 6 (lower is better) Translates to: QEGFPGLIVKPK*GIGRYKVNTLS Trigger: GGACAACGTATTTACCTTGTAACGTCCTATGCCCAACTTTGGTTTTACTATAAGACCCGGAAAACCCTCTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS GCA 72 bp | ACGTTACAAGGTAAATACGTTGTCCATTTCCCCTTTTaGACTCCAAAGCAAATACGTGAACGCTCTCTTTAC | + |
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Preference number: 6 (lower is better) Translates to: TLQGKYVVHFPF*TPKQIRERSLY Trigger: GTAAAGAGAGCGTTCACGTATTTGCTTTGGAGTGCAAAAGGGGAAATGGACAACGTATTTACCTTGTAACGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000040468.16 ENSMUST00000125319.2 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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| CDS TCA 72 bp | GCATGCCTGTTATCTTTAAATGCCACATTGTGGAGCTaGAATATTAGGTGTCGGCTAAATTTCTCTTCAGTG | + |
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Preference number: 6 (lower is better) Translates to: ACLLSLNATLWS*NIRCRLNFSSV Trigger: CACTGAAGAGAAATTTAGCCGACACCTAATATTTCAGCTCCACAATGTGGCATTTAAAGATAACAGGCATGC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000040468.16 ENSMUST00000136335.8 ENSMUST00000209787.2 ENSMUST00000211400.2 |
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