Pregenerated sensors for PRH1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059934Ensembl transcript IDs: ENSMUST00000074042.5, ENSMUST00000111972.4, ENSMUST00000177523.8
Found 118 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAGCCTGCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGG | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEACWWW*ALRGSR Trigger: CCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGC...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAGGGGTGGGCCTTGAGTaGGACTCGGCTGTGGGCCTC | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEGVGLE*DSAVGL Trigger: GAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCC...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR GCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAACCTAGGCTGTGGGCCTaGTGGTGGTGGTGGGCCTTG | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEPRLWA*WWWWAL Trigger: CAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGG...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAGCCTGCTGGTGGTGGTaGCCCTTGAGGGGGTCTCAG | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEACWWW*PLRGSQ Trigger: CTGAGACCCCCTCAAGGGCCACCACCACCAGCAGGC...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAAGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTERLWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCT...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATAGGGGGTCTCAGCTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: PWENFLREPSSYSFLSQNRGSQL*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCTGAGACCCCCT...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTGGGCCTGCTGGTGGTaGTGGCCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PWENFLREPSSYSFLSQNWACWW*WPLRGS Trigger: AGACCCCCTCAAGGGCCACCACCACCAGCAGGCCCA...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTGGGCCTGCTGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PWENFLREPSSYSFLSQNWACWW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCA...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTGGGCCTCCGGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLLISVTEFWWASGW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCCGGAGGCCCA...CCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATGGTACTCCTGGTGGTaGTGGGCCTTGAGGGGGTCT | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEWYSWW*WALRGS Trigger: AGACCCCCTCAAGGCCCACCACCACCAGGAGTACCA...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPSSYSFLSQNFWASWW*WALRGP Trigger: AGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCA...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTCTGTGGGCCTGCTGGTaGTGGTGGCCCTTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPSSYSFLSQNFLWACW*WWPLRG Trigger: CCCCCTCAAGGGCCACCACCACCAGCAGGCCCACAG...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTAGGGGGTCTCGGCTGTaGGCCTGCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPSSYSFLSQNFRGSRL*ACWWWW Trigger: CCACCACCACCAGCAGGCCCACAGCCGAGACCCCCT...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTCTGTGGGCCTGCTGGTaGTGGTGGGCCTTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: MGELSEGAIVLLISVTEFLWACW*WWALRG Trigger: CCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAG...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTAGGGGGCCTAGGCTGTaGGCCTGCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGRGPRL*ACWWWW Trigger: CCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCT...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGWASWW*WALRGS Trigger: CGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCA...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTAGGGGGCCTAGGCTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGRGPRL*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCT...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAACAGGCGGTCTTGGTTaGAACCCTGAAGGAGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTETGGLG*NPEGGG Trigger: GCCACCTCCTTCAGGGTTCCAACCAAGACCGCCTGT...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTAGGGGGCCTATGCTGTaGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 4 (lower is better) Translates to: MGELSEGAIVLLISVTEFRGPML*ASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCATAGGCCCCCT...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTCAGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGQLWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTG...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTAGGCTGTGGGCCTGCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPSSYSFLSQNFRLWAC*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCT...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTGTTGTGGGCCTGTTGTaGGTGGGCCTTGAGGGGGCC | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGVVGLL*VGLEGA Trigger: GGCCCCCTCAAGGCCCACCCACAACAGGCCCACAAC...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAAGGGTCTGCCTTGTGGTaGGCCTTGTGTGTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTEGSALW*ALCVSS Trigger: GCTGGAAACACACAAGGCCCACCACAAGGCAGACCC...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTCTGTGGTACTCCTGGTaGTGGTGGGCCTTGAGGGGG | + |
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Preference number: 4 (lower is better) Translates to: MGELSEGAIVLLISVTEFLWYSW*WWALRG Trigger: CCCCCTCAAGGCCCACCACCACCAGGAGTACCACAG...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTATGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGMLWAS*WWWALR Trigger: CCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAT...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTAGG | + |
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Preference number: 4 (lower is better) Translates to: WENFLREPSSYSFLSQNFLWASC*GWALSR Trigger: CCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAG...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATCTGGGGTCTGCCTTGTaGTGGGCCTTGTGTGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: PWENFLREPSSYSFLSQNLGSAL*WALCVS Trigger: GGAAACACACAAGGCCCACCACAAGGCAGACCCCAG...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGAGTAGGTCTTGGTTGTaGGCCTGTTGTGGGTGGGCC | + |
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Preference number: 4 (lower is better) Translates to: GELSEGAIVLLISVTEFWSRSWL*ACCGWA Trigger: GGCCCACCCACAACAGGCCCACAACCAAGACCTACT...CCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR CCA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTAGGAGGTGTTTGCTGTaGGCCTCCTGTTGGGGGTGG | + |
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Preference number: 4 (lower is better) Translates to: ENFLREPSSYSFLSQNFGRRCLL*ASCWGW Trigger: CCACCCCCAACAGGAGGCCCACAGCAAACACCTCCT...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS-3UTR TCA 90 bp | GCCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATCTTGGTTGGAACCCTaGAGGAGGTGGCCTTTGATT | + |
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Preference number: 4 (lower is better) Translates to: AMGELSEGAIVLLISVTESWLEP*RRWPLI Trigger: AATCAAAGGCCACCTCCTTCAGGGTTCCAACCAAGA...TTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
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| CDS CCA 90 bp | CTGTGGGCCTCCGGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTaGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCGCTGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LWASGWWWALRGSRL*ASWWWWALRGSLLW Trigger: CCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGAGGCCCACAG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS GCA 90 bp | TGGGCCTGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTaGTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTGC | + |
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Preference number: 5 (lower is better) Translates to: WACCGWALRGPRLWA*WWWWALRGSRLWAC Trigger: GCAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TCCGGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGT | + |
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Preference number: 5 (lower is better) Translates to: SGWWWALRGSRLWAS*WWWALRGSLLWASC Trigger: ACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | CTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTGGGACTCGGCTGTaGGCCTCCGGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LWASCWGWALSGTRL*ASGWWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTGCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: CCGWALRGPRLWACW*WWALRGSRLWACWW Trigger: CCACCAGCAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWALRGPRLWASWW*WALRGSLLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWWALRGPRLWASW*WWALRGSLLWASWW Trigger: CCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TCCTGGTGGTGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
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Preference number: 5 (lower is better) Translates to: SWWWWALRGPRLWAS*WWWALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWALRGSLLWASWWW*ALRGPRLWASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWALRGSLLWASWW*WALRGPRLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASW*WWALRGPRLWASWW Trigger: CCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA 70% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | CTGTGGTACTCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTaGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
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Preference number: 5 (lower is better) Translates to: LWYSWWWWALRGSRL*ASWWWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGTACCACAG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWALRGPMLWASWWW*ALRGSLLWASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWALRGPMLWASWW*WALRGSLLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: WWWWALRGPMLWASW*WWALRGSLLWASWW Trigger: CCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 90 bp | TCCTGGTGGTGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SWWWWALRGPMLWAS*WWWALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCAGGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWALRGSLLWASWWW*ALRGPMLWASWWWW Trigger: CCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWALRGSLLWASWW*WALRGPMLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASW*WWALRGPMLWASWW Trigger: CCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGCCCTTGAGGGGGTCTCAGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWPLRGSQLWASWW*WALRGSLLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAAGGGCCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGCCCTTGAGGGGGTCTCAGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWPLRGSQLWASW*WWALRGSLLWASWW Trigger: CCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAAGGGCCACCACCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGCTGGTGGTGGTGGCCCTTGAGGGGGTCTCAGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: CWWWWPLRGSQLWAS*WWWALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAAGGGCCACCACCACCAGCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTTGTGGGCCTGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTGTaGGCCTGCTGGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WLWACCGWALRGPRL*ACWWWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | GAGGAGGTGTTTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTaGGACTCGGCTGTGGGCCTCCGGGTGGTGGTGGGCCTTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EEVFAVGLLLGVGLE*DSAVGLRVVVGLEG Trigger: CCCCTCAAGGCCCACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAAACACCTCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGGCTGTGGTACTCCTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWALRGSLLWASWWW*ALRGSRLWYSWWWW Trigger: CCACCACCACCAGGAGTACCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCGGCTGTGGTACTCCTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWALRGSLLWASWW*WALRGSRLWYSWWW Trigger: CCACCACCAGGAGTACCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGTACTCCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASW*WWALRGSRLWYSWW Trigger: CCACCAGGAGTACCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGGGGTGGGCCTTGAGTAGGTCTTGGTTGTGGGCCTGTTGTGGGTaGGCCTTGAGGGGGCCTAGGCTGTGGGCCTGCTGGTGGTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WGWALSRSWLWACCG*ALRGPRLWACWWWW Trigger: CCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | CTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTAGGTCTTGGTTGTaGGCCTGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LWASCWGWALSRSWL*ACCGWALRGPRLWA Trigger: GGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTGGGGGTaGGCCTTGAGTAGGTCTTGGTTGTGGGCCTGTTGTGGGTGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: WWALRGSLLWASCWG*ALSRSWLWACCGWA Trigger: GGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | CTGTGGGCCTCCTGGTGGTGGTGGGCCTTGAGGGGGTCGCTGCTGTaGGCCTCCTGTTGGGGGTGGGCCTTGAGTAGGTCTTGGTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWASWWWWALRGSLL*ASCWGWALSRSWLW Trigger: CCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TCGCTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTAGGTCTTaGTTGTGGGCCTGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLLWASCWGWALSRS*LWACCGWALRGPRL Trigger: CAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TGGTGGTGGTGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTAGGTCTTGGTTGTGGGCCTGTTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WWWWALRGSLLWASC*GWALSRSWLWACCG Trigger: CCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 90 bp | TTGTGGTGGGCCTTGTGTGTTTCCAGCCAGAGGAGGTGTTTGCTGTaGGCCTCCTGTTGGGGGTGGGCCTTGAGTGGGACTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LWWALCVSSQRRCLL*ASCWGWALSGTRLW Trigger: CCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAAACACCTCCTCTGGCTGGAAACACACAAGGCCCACCACAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATGCTGTGGGCCTCCTGTaGGGGGTGGGCCTTGAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWENFLREPSSYSFLSQNAVGLL*GVGLEW Trigger: CCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGC...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTGGTGGTGGTGGCCCTaGAGGGGGTCTCAGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWENFLREPSSYSFLSQNWWWWP*RGSQLW Trigger: CCACAGCTGAGACCCCCTCAAGGGCCACCACCACCA...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTGTTGTGGGTGGGCCTaGAGGGGGCCTAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: PWENFLREPSSYSFLSQNCCGWA*RGPRLW Trigger: CCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACA...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGGTGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPSSYSFLSQNFGWWWA*RGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCC...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGELSEGAIVLLISVTEFWWWWA*RGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCA...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTTGGTGGTGGTGGGCCTaGAGGGGGTCGCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPSSYSFLSQNFWWWWA*RGSLLW Trigger: CCACAGCAGCGACCCCCTCAAGGCCCACCACCACCA...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTGGTGGTGGTGGGCCTaGAGGGGGCCTAGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPSSYSFLSQNFGWWWWA*RGPRLW Trigger: CCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCA...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | CCATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTGGTGGTGGTGGGCCTaGCTGGCTCCCATTAACAGG | + |
|
Preference number: 5 (lower is better) Translates to: PWENFLREPSSYSFLSQNWWWWA*LAPINR Trigger: CCTGTTAATGGGAGCCAGCAAGGCCCACCACCACCA...ATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTGGTGGTGGTGGGCCTaGAGGGGGTCTCTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPSSYSFLSQNFGWWWWA*RGSLLW Trigger: CCACAGCAGAGACCCCCTCAAGGCCCACCACCACCA...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTGGTGGTGGTGGGCCTaGAGGGGGCCTATGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPSSYSFLSQNFGWWWWA*RGPMLW Trigger: CCACAGCATAGGCCCCCTCAAGGCCCACCACCACCA...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGTTGGGGGTGGGCCTaGAGTGGGACTCGGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: MGELSEGAIVLLISVTEFCWGWA*SGTRLW Trigger: CCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACA...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTTGGTTGTGGGCCTGTaGTGGGTGGGCCTTGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: ENFLREPSSYSFLSQNFGLVVGL*WVGLEG Trigger: CCCCTCAAGGCCCACCCACAACAGGCCCACAACCAA...ACCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS TCA 90 bp | TGGGCCTTGCTGGCTCCCATTAACAGGCGGTCTTGGTTGGAACCCTaGAGGAGGTGGCCTTTGATTTGGGATCTGGATTTGATTCTGATT | + |
|
Preference number: 5 (lower is better) Translates to: WALLAPINRRSWLEP*RRWPLIWDLDLILI Trigger: AATCAGAATCAAATCCAGATCCCAAATCAAAGGCCACCTCCTTCAGGGTTCCAACCAAGACCGCCTGTTAATGGGAGCCAGCAAGGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | TGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTAGCCAGAGGAGGTGTTaGCTGTGGGCCTCCTGTTGG | + |
|
Preference number: 5 (lower is better) Translates to: WENFLREPSSYSFLSQNFSQRRC*LWASCW Trigger: CCAACAGGAGGCCCACAGCAAACACCTCCTCTGGCT...AAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTGCCTTGTGGTGGGCCTaGTGTGTTTCCAGCCAGAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGELSEGAIVLLISVTEFALWWA*CVSSQR Trigger: CCTCTGGCTGGAAACACACAAGGCCCACCACAAGGC...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | ATGGGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTCCCTGGGGTCTGCCTaGTGGTGGGCCTTGTGTGTT | + |
|
Preference number: 5 (lower is better) Translates to: MGELSEGAIVLLISVTEFSLGSA*WWALCV Trigger: AACACACAAGGCCCACCACAAGGCAGACCCCAGGGA...AAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCCCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGTTGAGTAGGTCTTGGTaGTGGGCCTGTTGTGGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GELSEGAIVLLISVTEFWLSRSW*WACCGW Trigger: CCACCCACAACAGGCCCACAACCAAGACCTACTCAA...CCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS-3UTR CAA 90 bp | GGAGAACTTTCTGAGGGAGCCATCGTCCTACTCATTTCTGTCACAGAATTTTGGATTTGGGATCTGGATTaGATTCTGATTTTCTTCACG | + |
|
Preference number: 5 (lower is better) Translates to: GELSEGAIVLLISVTEFWIWDLD*ILIFFT Trigger: CGTGAAGAAAATCAGAATCAAATCCAGATCCCAAAT...CCAAAATTCTGTGACAGAAATGAGTAGGACGATGGCTCCCTCAGAAAGTTCTCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | GCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSRLWASWW*WALRGSRLWAS Trigger: GGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSRLWASW*WWALRGSRLWA Trigger: GGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | GCCTTGAGGGGGCCTAGGCTGTGGGCCTGCTGGTGGTaGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGPRLWACWW*WALRGSRLWAC Trigger: GCAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | TGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTGCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGPRLWACW*WWALRGSRLWA Trigger: GGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | GCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSRLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | GCCTTGAGTGGGACTCGGCTGTGGGCCTCCGGGTGGTaGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALSGTRLWASGW*WALRGSRLWAS Trigger: GGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | TGGGCCTTGAGTGGGACTCGGCTGTGGGCCTCCGGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALSGTRLWASG*WWALRGSRLWA Trigger: GGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCA 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
||
| CDS CCA 72 bp | TTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCGGCTGTGGGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGSRLWASWWW*ALRGSRLWASW Trigger: CCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | GCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: ALRGPRLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGPRLWASW*WWALRGSLLWA Trigger: GGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | GCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSLLWASWW*WALRGPRLWAS Trigger: GGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: WALRGSLLWASW*WWALRGPRLWA Trigger: GGCCCACAGCCTAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCA 71% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCGGCTGTGGTACTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSRLWYSW*WWALRGSRLWA Trigger: GGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGTACCACAGCCGAGACCCCCTCAAGGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | GCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: ALRGPMLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGPMLWASW*WWALRGSLLWA Trigger: GGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSLLWASW*WWALRGPMLWA Trigger: GGCCCACAGCATAGGCCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | CCCTTGAGGGGGTCTCAGCTGTGGGCCTCCTGGTGGTaGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: PLRGSQLWASWW*WALRGSLLWAS Trigger: GGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAAGGG 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGCCCTTGAGGGGGTCTCAGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WPLRGSQLWASW*WWALRGSLLWA Trigger: GGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAAGGGCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TTGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LRGSRLWASWWW*ALRGSLLWASC Trigger: ACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TTTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTaGGACTCGGCTGTGGGCCTCCGGGTGGTGGTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: FAVGLLLGVGLE*DSAVGLRVVVG Trigger: GCCCACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAAA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGTGGGCCTTGAGGGGGCCTAGGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWALRGPRLWAS*WWWALRGSLLW Trigger: CCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 72 bp | GGGTCTCGGCTGTGGTACTCCTGGTGGTGGTGGGCCTaGAGGGGGTCTCGGCTGTGGGCCTCCTGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSRLWYSWWWWA*RGSRLWASWWW Trigger: CCACCACCAGGAGGCCCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGTACCACAGCCGAGACCC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS TCA 72 bp | GGTGTTTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTaGGTGGGACTCGGCTGTGGGCCTCCGGGTGGTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GVCCGPPVGGGP*VGLGCGPPGGG Trigger: ACCACCACCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAAACACC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGTGGGCCTTGAGGGGGTCTCGGCTGTGGTACTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWALRGSRLWYS*WWWALRGSRLW Trigger: CCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGTACCACAGCCGAGACCCCCTCAAGGCCCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGGTaGTGGTGGGCCTTGAGGGGGTCTCGGCTGTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSLLWASW*WWALRGSRLWY Trigger: GTACCACAGCCGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TTGAGGGGGCCTATGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGPMLWASWWW*ALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGTGGGCCTTGAGGGGGCCTATGCTGTGGGCCTCCTaGTGGTGGTGGGCCTTGAGGGGGTCTCTGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: WWALRGPMLWAS*WWWALRGSLLW Trigger: CCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCATAGGCCCCCTCAAGGCCCACCA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TTGAGGGGGTCTCAGCTGTGGGCCTCCTGGTGGTGGTaGGCCTTGAGGGGGTCTCTGCTGTGGGCCTCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRGSQLWASWWW*ALRGSLLWASW Trigger: CCAGGAGGCCCACAGCAGAGACCCCCTCAAGGCCCACCACCACCAGGAGGCCCACAGCTGAGACCCCCTCAA 68% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | CAGAGGAGGTGTTTGCTGTGGGCCTCCTGTTGGGGGTaGGCCTTGAGTGGGACTCGGCTGTGGGCCTCCGGG | + |
|
Preference number: 6 (lower is better) Translates to: QRRCLLWASCWG*ALSGTRLWASG Trigger: CCCGGAGGCCCACAGCCGAGTCCCACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAAACACCTCCTCTG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTaGGGGTGGGCCTTGAGTAGGTCTTGGTTGTGGGCC | + |
|
Preference number: 6 (lower is better) Translates to: WALRGSLLWASC*GWALSRSWLWA Trigger: GGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGCCCA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 90 bp | CTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTTGAGTAGGTCTTGGTaGTGGGCCTGTTGTGGGTGGGCCTTGAGGGGGCCTAGGCTGTGG | + |
|
Preference number: 6 (lower is better) Translates to: LLWASCWGWALSRSW*WACCGWALRGPRLW Trigger: CCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 90 bp | GCCTTGAGGGGGTCGCTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTaGAGTAGGTCTTGGTTGTGGGCCTGTTGTGGGTGGGCCTTGAGG | + |
|
Preference number: 6 (lower is better) Translates to: ALRGSLLWASCWGWA*SRSWLWACCGWALR Trigger: CCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCCCCTCAAGGC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CCA 72 bp | TGGGCCTCCTGTTGGGGGTGGGCCTTGAGTAGGTCTTaGTTGTGGGCCTGTTGTGGGTGGGCCTTGAGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: WASCWGWALSRS*LWACCGWALRG Trigger: CCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCA 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 72 bp | AGTAGGTCTTGGTTGTGGGCCTGTTGTGGGTGGGCCTaGAGGGGGCCTAGGCTGTGGGCCTGCTGGTGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: SRSWLWACCGWA*RGPRLWACWWW Trigger: CCACCACCAGCAGGCCCACAGCCTAGGCCCCCTCAAGGCCCACCCACAACAGGCCCACAACCAAGACCTACT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 72 bp | GGGTCGCTGCTGTGGGCCTCCTGTTGGGGGTGGGCCTaGAGTAGGTCTTGGTTGTGGGCCTGTTGTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: GSLLWASCWGWA*SRSWLWACCGW Trigger: CCACCCACAACAGGCCCACAACCAAGACCTACTCAAGGCCCACCCCCAACAGGAGGCCCACAGCAGCGACCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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| CDS CAA 72 bp | GTCTTGGTTGGAACCCTGAAGGAGGTGGCCTTTGATTaGGGATCTGGATTTGATTCTGATTTTCTTCACGGG | + |
|
Preference number: 6 (lower is better) Translates to: VLVGTLKEVAFD*GSGFDSDFLHG Trigger: CCCGTGAAGAAAATCAGAATCAAATCCAGATCCCAAATCAAAGGCCACCTCCTTCAGGGTTCCAACCAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000074042.5 ENSMUST00000111972.4 ENSMUST00000177523.8 |
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