Pregenerated sensors for PRF1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037202Ensembl transcript IDs: ENSMUST00000035419.7, ENSMUST00000219375.2
Found 161 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCCATGTTTACGCTTCGTGGCAGTAGTTGCCAAGCTTTCGGGCATTaGAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGATGCTCTAT | + |
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Preference number: 1 (lower is better) Translates to: PMFTLRGSSCQAFGH*RAEAVWKGKSGMLY Trigger: ATAGAGCATCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGCAACTACTGCCACGAAGCGTAAACATGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 90 bp | CATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCCATGTaGTTGGTGACACAGGCCTTCACTCATCAGGAGCAGAATGAGGGA | + |
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Preference number: 1 (lower is better) Translates to: HAYHYIIFIALCQAM*LVTQAFTHQEQNEG Trigger: TCCCTCATTCTGCTCCTGATGAGTGAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR-3UTR CCA 90 bp | AGGCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCCCTGTAGACCCAGGCTaGCCTCGAACTCATAGATAT | + |
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Preference number: 2 (lower is better) Translates to: RQCGRESQGCSIVKTQPLPVDPG*PRTHRY Trigger: ATATCTATGAGTTCGAGGCCAGCCTGGGTCTACAGG...GAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR CAA 90 bp | GCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCCATGTGCTaGGTGACACAGGCCTTCACTCATCAGGAGCAGAATGAGGGACAA | + |
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Preference number: 2 (lower is better) Translates to: AYHYIIFIALCQAMC*VTQAFTHQEQNEGQ Trigger: TTGTCCCTCATTCTGCTCCTGATGAGTGAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR-3UTR TCA 90 bp | CACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCCATGTGCTCATCAGGAGCAGAATaGGGGACAAAAGGTACCCAG | + |
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Preference number: 2 (lower is better) Translates to: HQHAYHYIIFIALCQAMCSSGAE*GTKGTQ Trigger: CTGGGTACCTTTTGTCCCTCATTCTGCTCCTGATGA...GCACATGGCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR-3UTR GCA 90 bp | AAAAGGTACCCAGGAATCGGGACCCAGGAATTGTCTCTAACAGATGATCTTGCTATATCCACCTGTCTCTaGCTCCCAAATGCTGGGATT | + |
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Preference number: 2 (lower is better) Translates to: KRYPGIGTQELSLTDDLAISTCL*LPNAGI Trigger: AATCCCAGCATTTGGGAGGCAGAGACAGGTGGATAT...AGCAAGATCATCTGTTAGAGACAATTCCTGGGTCCCGATTCCTGGGTACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 72 bp | ACGCTTCGTGGCAGTAGTTGCCAAGCTTTCGGGCATTaGAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: TLRGSSCQAFGH*RAEAVWKGKSG Trigger: CCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGCAACTACTGCCACGAAGCGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 72 bp | GCCACTCTAGTGGCCTCTCTATGCATAGTAAGCCATTaGAGATCCCCAGGGAGAAGCCAGTTGAACATTCCA | + |
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Preference number: 3 (lower is better) Translates to: ATLVASLCIVSH*RSPGRSQLNIP Trigger: TGGAATGTTCAACTGGCTTCTCCCTGGGGATCTGCAATGGCTTACTATGCATAGAGAGGCCACTAGAGTGGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR CCA 72 bp | TGCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTaGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAAC | + |
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Preference number: 3 (lower is better) Translates to: CQAFGHCRAEAV*KGKSGMLYCKN Trigger: GTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 72 bp | TGTCTCTGCCTCCCAAATGCTGGGATTAAAGGCGTGTaGTACTACACCCAGCTCTCAGGCATGTTATTGTTG | + |
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Preference number: 3 (lower is better) Translates to: CLCLPNAGIKGV*YYTQLSGMLLL Trigger: CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGCATTTGGGAGGCAGAGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| 3UTR-3UTR CAA 90 bp | AGGCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCATGCATAGTAAGCCATaGCAGATCCCCAGGGAGAAG | + |
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Preference number: 3 (lower is better) Translates to: RQCGRESQGCSIVKTQPLMHSKP*QIPREK Trigger: CTTCTCCCTGGGGATCTGCAATGGCTTACTATGCAT...GAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGCCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR TCA 72 bp | CCCAGGAATCGGGACCCAGGAATTGTCTCTAACAGATaGTCTTGCTATGCCAGGGAGAAGGGATTTAAAGCT | + |
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Preference number: 3 (lower is better) Translates to: PRNRDPGIVSNR*SCYAREKGFKA Trigger: AGCTTTAAATCCCTTCTCCCTGGCATAGCAAGATCATCTGTTAGAGACAATTCCTGGGTCCCGATTCCTGGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 72 bp | CATTACATCATATTTATAGCCCTCTGTCAAGCCATGTaGTTGGTGACACAGGCCTTCACTCATCAGGAGCAG | + |
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Preference number: 3 (lower is better) Translates to: HYIIFIALCQAM*LVTQAFTHQEQ Trigger: CTGCTCCTGATGAGTGAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTAATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| 3UTR GCA 72 bp | TTATGCTACTGTTTCTTGACTCAGAGCGTAAGGGATTaGAGTCCCACATTACTAGCAGAATTAGAAAAAGTA | + |
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Preference number: 3 (lower is better) Translates to: LCYCFLTQSVRD*SPTLLAELEKV Trigger: TACTTTTTCTAATTCTGCTAGTAATGTGGGACTGCAATCCCTTACGCTCTGAGTCAAGAAACAGTAGCATAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGAGGCAGGTCCCTCCAGTaGGATGGGGCAGACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: AKLSGIAGLRQCGRESQGGRSLQ*DGADTW Trigger: CCAAGTGTCTGCCCCATCTCACTGGAGGGACCTGCC...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGACCACCAGACCAGGGTTaGTGGGCAGTGAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: AKLSGIAGLRQCGRESQGPPDQG*WAVRLS Trigger: GGACAGCCTCACTGCCCAGCAACCCTGGTCTGGTGG...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGACCTCTGTGTGTTCACTaGGAAGGAGCCGGAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: AKLSGIAGLRQCGRESQGPLCVH*EGAGAA Trigger: CGCCGCTCCGGCTCCTTCCCAGTGAACACACAGAGG...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATCCCAGACCTGCACCCTaGGGGGTCCCCCTGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDPRPAP*GVPLWT Trigger: TGTCCACAGGGGGACCCCTCAGGGTGCAGGTCTGGG...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGTCGGCATCCCAGACCTaGACCCTGAGGGGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLSASQT*TLRGPP Trigger: AGGGGGACCCCTCAGGGTGCAGGTCTGGGATGCCGA...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAATCGGCATCCCAGACCTaGACCCTGAGGGGTCCCCCT | + |
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Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQSASQT*TLRGPP Trigger: AGGGGGACCCCTCAGGGTGCAGGTCTGGGATGCCGA...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATGGGCCACACCCTCCGTaGAGTGGACCTTGGCTGCGG | + |
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Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDGPHPP*SGPWLR Trigger: CCGCAGCCAAGGTCCACTCCACGGAGGGTGTGGCCC...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAGGCAGGTCCCTCCAGTaGGATGGGGCAGACACTTGG | + |
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Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQGRSLQ*DGADTW Trigger: CCAAGTGTCTGCCCCATCTCACTGGAGGGACCTGCC...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGCCACCAGACCAGGGTTaGTGGGCAGTGAGGCTGTCC | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLPPDQG*WAVRLS Trigger: GGACAGCCTCACTGCCCAGCAACCCTGGTCTGGTGG...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAACTGACCTGCAGGGCCTaGTACAGTTCTGCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQLTCRA*YSSATG Trigger: CCCGGTGGCAGAACTGTAGCAGGCCCTGCAGGTCAG...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGCTGACCTGCAGGGCCTaGTACAGTTCTGCCACCGGG | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLLTCRA*YSSATG Trigger: CCCGGTGGCAGAACTGTAGCAGGCCCTGCAGGTCAG...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGCCAGACCAGGGTTGCTaGGCAGTGAGGCTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: QAGLELIDIHLSLPPKCWPDQGC*AVRLSR Trigger: CCTGGACAGCCTCACTGCCCAGCAACCCTGGTCTGG...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGCCAGACCAGGGTTGCTaGGCAGTGAGGCTGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLPDQGC*AVRLSR Trigger: CCTGGACAGCCTCACTGCCCAGCAACCCTGGTCTGG...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAATGGCAGTGTGAGCTGTaGGGCCGCCAGTGGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQWQCEL*GRQWVI Trigger: AATCACCCACTGGCGGCCTCACAGCTCACACTGCCA...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGCCCAGACCTGCACCCTaGGGGGTCCCCCTGTGGACA | + |
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Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLPRPAP*GVPLWT Trigger: TGTCCACAGGGGGACCCCTCAGGGTGCAGGTCTGGG...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAATACAGAGGGTGCAGGTaGGGTCAGGCCTCAGGAACC | + |
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Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQYRGCR*GQASGT Trigger: GGTTCCTGAGGCCTGACCGCACCTGCACCCTCTGTA...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GTGACACAGGCCTTCACTCATCAGGAGCAGAATGAGGGACAAAAGGTACCCAGGTCTCCCAGAAGCCCCTaGGGGGCATACTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: VTQAFTHQEQNEGQKVPRSPRSP*GAYSRQ Trigger: CTGCCTGGAGTATGCCCCCCAGGGGCTTCTGGGAGA...CCTGGGTACCTTTTGTCCCTCATTCTGCTCCTGATGAGTGAAGGCCTGTGTCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGTGGCTACTCTTATGCTaGCCTGACCTGCAGGGCCTG | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLWLLLC*PDLQGL Trigger: CAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCA...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATACTCTTATGCTGGCCTaGCCTGCAGGGCCTGCTACA | + |
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Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDTLMLA*PAGPAT Trigger: TGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGT...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATCCGAAGAGCAGATCATaGGTGGAGTCCAGAGGGCCA | + |
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Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDPKSRS*VESRGP Trigger: TGGCCCTCTGGACTCCACGCATGATCTGCTCTTCGG...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACCTCTGTGTGTTCACTaGGAAGGAGCCGGAGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLPLCVH*EGAGAA Trigger: CGCCGCTCCGGCTCCTTCCCAGTGAACACACAGAGG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGCGCATGTTTGCCTCTaGCCTAGGGTTCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: QAGLELIDIHLSLPPKCWAHVCL*PRVHIQ Trigger: CTGGATGTGAACCCTAGGCCAGAGGCAAACATGCGC...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGCGTGGGCAGCAGTCCTaGTTGGTGACCTTTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: QAGLELIDIHLSLPPKCWRGQQS*LVTFES Trigger: GGATTCAAAGGTCACCAACCAGGACTGCTGCCCACG...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGATCACATGTCACCTCATaGAAACCAGAGTGGGGAGAC | + |
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Preference number: 4 (lower is better) Translates to: AKLSGIAGLRQCGRESQGSHVTS*KPEWGD Trigger: GTCTCCCCACTCTGGTTTCCATGAGGTGACATGTGA...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGTCTCCCAGAAGCCCCTaGGGGGCATACTCCAGGCAG | + |
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Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLSPRSP*GAYSRQ Trigger: CTGCCTGGAGTATGCCCCCCAGGGGCTTCTGGGAGA...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTATGGCAGTGTGAGCTGTaGGGCCGCCAGTGGGTGATT | + |
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Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLWQCEL*GRQWVI Trigger: AATCACCCACTGGCGGCCTCACAGCTCACACTGCCA...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGATTACGCTGGCAGTGTaGGCTGTGAGGCCGCCAGTG | + |
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Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLITLAV*AVRPPV Trigger: CACTGGCGGCCTCACAGCTCACACTGCCAGCGTAAT...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGAGTTTTTACAGAGGGTaGAGGTGCGGTCAGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLSFYRG*RCGQAS Trigger: TGAGGCCTGACCGCACCTGCACCCTCTGTAAAAACT...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATGCGCATGTTTGCCTCTaGCCTAGGGTTCACATCCAG | + |
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Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDAHVCL*PRVHIQ Trigger: CTGGATGTGAACCCTAGGCCAGAGGCAAACATGCGC...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGAGTGACCTTTGAATCCTaGCACTCACACTGGCATGAA | + |
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Preference number: 4 (lower is better) Translates to: AKLSGIAGLRQCGRESQGVTFES*HSHWHE Trigger: TTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCAC...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | GTGACACAGGCCTTCACTCATCAGGAGCAGAATGAGGGACAAAAGGTACCCAGGCGTGGGCAGCAGTCCTaGTTGGTGACCTTTGAATCC | + |
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Preference number: 4 (lower is better) Translates to: VTQAFTHQEQNEGQKVPRRGQQS*LVTFES Trigger: GGATTCAAAGGTCACCAACCAGGACTGCTGCCCACG...CCTGGGTACCTTTTGTCCCTCATTCTGCTCCTGATGAGTGAAGGCCTGTGTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACAAGCCCCTCTGTCGTaGGCAGCAGTCCTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLQAPLS*AAVLVG Trigger: ACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACCATTCAGGGTCAGCTaGCAGGTACGCAGGGCTGTA | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLPFRVS*QVRRAV Trigger: TACAGCCCTGCGTACCTGTCAGCTGACCCTGAATGG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGCCGAAGAGCAGATCATaGGTGGAGTCCAGAGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLPKSRS*VESRGP Trigger: TGGCCCTCTGGACTCCACGCATGATCTGCTCTTCGG...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTAACCACACAGCCCCACTaGGGTTTCCTGGAGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLTTQPH*GFLEDL Trigger: GAGATCCTCCAGGAAACCGCAGTGGGGCTGTGTGGT...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGAGCCATCCATACACCTaGCACGAACTTGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLSHPYT*HELVLL Trigger: CAGAAGCACAAGTTCGTGCCAGGTGTATGGATGGCT...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTTGCTTACCACCAAATaGGCCAAGCCCCTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDLLTTK*AKPLCR Trigger: ACGACAGAGGGGCTTGGCCCATTTGGTGGTAAGCAA...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATCCGGTCCTGAACTCCTaGCCACCAAAGAAGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDPVLNS*PPKKTF Trigger: AAAGGTCTTCTTTGGTGGCCAGGAGTTCAGGACCGG...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAATCACATGTCACCTCATaGAAACCAGAGTGGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQSHVTS*KPEWGD Trigger: GTCTCCCCACTCTGGTTTCCATGAGGTGACATGTGA...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | ACCAGGCCACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCATTACGCTGGCAGTGTaGGCTGTGAGGCCGCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TRPPACLPLHHIYSPLSSITLAV*AVRPPV Trigger: CACTGGCGGCCTCACAGCTCACACTGCCAGCGTAAT...GCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTGGCCTGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACTACCTCATCAGCTGTaGGCCCATTCAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLLPHQL*AHSGSA Trigger: AGCTGACCCTGAATGGGCTCACAGCTGATGAGGTAG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | AGGCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCACTCTTATGCTGGCCTaGCCTGCAGGGCCTGCTACA | + |
|
Preference number: 4 (lower is better) Translates to: RQCGRESQGCSIVKTQPLTLMLA*PAGPAT Trigger: TGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGT...GAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGCCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGACGAACTTGTGCTTCTaGTTGCATTCTGACCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLTNLCF*LHSDRV Trigger: CACTCGGTCAGAATGCAAGCAGAAGCACAAGTTCGT...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGTATGCTGGCCTGACCTaGAGGGCCTGCTACAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLYAGLT*RACYSS Trigger: AGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATA...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGAGGAGAATTTCACCCTaGCGTGGTTTAGCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLRRISP*RGLAHM Trigger: CATGTGAGCTAAACCACGGCAGGGTGAAATTCTCCT...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAACACTGGCATGAATCATaGCTACTCTTATGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQHWHES*LLLCWP Trigger: AGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTG...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAGTGACCTTTGAATCCTaGCACTCACACTGGCATGAA | + |
|
Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQVTFES*HSHWHE Trigger: TTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCAC...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCTACAAGCCCCTCTGTCGTaGGCAGCAGTCCTGGTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AVWKGKSGMLYCKNSATLQAPLS*AAVLVG Trigger: ACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTG...TAGAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGATGGGGCAGACACTTaGCATGGTAGGAGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLDGADT*HGRRIS Trigger: TGAAATTCTCCTACCATGCCAAGTGTCTGCCCCATC...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGCTGGTTGGTGACCTTTaGATCCTGGCACTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLLVGDL*ILALTL Trigger: CAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAG...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGAGTTTTTACAGAGGGTaGAGGTGCGGTCAGGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLSFYRG*RCGQAS Trigger: TGAGGCCTGACCGCACCTGCACCCTCTGTAAAAACT...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGAGGTGGCCATTTTGTaGTGTTTCTTCTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELIDIHLSLPPKCWEVAIL*CFFFSS Trigger: TGAGGAGAAGAAGAAACAGCACAAAATGGCCACCTC...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCTAACCACACAGCCCCACTaGGGTTTCCTGGAGGATCTC | + |
|
Preference number: 4 (lower is better) Translates to: AVWKGKSGMLYCKNSATLTTQPH*GFLEDL Trigger: GAGATCCTCCAGGAAACCGCAGTGGGGCTGTGTGGT...TAGAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGTCTGGTGGAAAGAGGTaGCCATTTTGTGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGWPRTHRYPPVSASQMLSGGKR*PFCAVS Trigger: AGAAACAGCACAAAATGGCCACCTCTTTCCACCAGA...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGTCTGGTGGAAAGAGGTaGCCATTTTGTGCTGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QAGLELIDIHLSLPPKCWSGGKR*PFCAVS Trigger: AGAAACAGCACAAAATGGCCACCTCTTTCCACCAGA...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS-3UTR CCA 90 bp | TACATCATATTTATAGCCCTCTGTCAAGCCATGTGCTTGGTGACACAGGCCTTCTGGCTACTCTTATGCTaGCCTGACCTGCAGGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YIIFIALCQAMCLVTQAFWLLLC*PDLQGL Trigger: CAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCA...GAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTATTGCTTACCACCAAATaGGCCAAGCCCCTCTGTCGT | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLLLTTK*AKPLCR Trigger: ACGACAGAGGGGCTTGGCCCATTTGGTGGTAAGCAA...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGCCGGTCCTGAACTCCTaGCCACCAAAGAAGACCTTT | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLPVLNS*PPKKTF Trigger: AAAGGTCTTCTTTGGTGGCCAGGAGTTCAGGACCGG...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GTGACACAGGCCTTCACTCATCAGGAGCAGAATGAGGGACAAAAGGTACCCAGGTCATGGAAACCAGAGTaGGGAGACCTGTCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: VTQAFTHQEQNEGQKVPRSWKPE*GDLSQE Trigger: TTCTTGTGACAGGTCTCCCCACTCTGGTTTCCATGA...CCTGGGTACCTTTTGTCCCTCATTCTGCTCCTGATGAGTGAAGGCCTGTGTCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| 3UTR CAA 72 bp | AGCCACTCTAGTGGCCTCTCTATGCATAGTAAGCCATaGCAGATCCCCAGGGAGAAGCCAGTTGAACATTCC | + |
|
Preference number: 4 (lower is better) Translates to: SHSSGLSMHSKP*QIPREKPVEHS Trigger: GGAATGTTCAACTGGCTTCTCCCTGGGGATCTGCAATGGCTTACTATGCATAGAGAGGCCACTAGAGTGGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACCTGGCACGAACTTGTaGTTCTGCTTGCATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLPGTNL*FCLHSD Trigger: GTCAGAATGCAAGCAGAAGCACAAGTTCGTGCCAGG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATAGGTCTTCTCAGCTaGAAAATTGGCTACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VDPGWPRTHRYPPVSASQIGLLS*KIGYLG Trigger: TCCAAGGTAGCCAATTTTGCAGCTGAGAAGACCTAT...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTAGGCGAAAACTGTACATaGGACACTCTACTGTGTCGC | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLGENCT*DTLLCR Trigger: GCGACACAGTAGAGTGTCGCATGTACAGTTTTCGCC...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGAGCCATCCATACACCTaGCACGAACTTGTGCTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLSHPYT*HELVLL Trigger: CAGAAGCACAAGTTCGTGCCAGGTGTATGGATGGCT...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCCATGTGCCTACCTCATCAGCTGTaGGCCCATTCAGGGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: HQHAYHYIIFIALCQAMCLPHQL*AHSGSA Trigger: AGCTGACCCTGAATGGGCTCACAGCTGATGAGGTAG...GCACATGGCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATATAGGTCTTCTCAGCTaGAAAATTGGCTACCTTGGA | + |
|
Preference number: 4 (lower is better) Translates to: AGLELIDIHLSLPPKCWDIGLLS*KIGYLG Trigger: TCCAAGGTAGCCAATTTTGCAGCTGAGAAGACCTAT...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTATCATGGAAACCAGAGTaGGGAGACCTGTCACAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: WPRTHRYPPVSASQMLGLSWKPE*GDLSQE Trigger: TTCTTGTGACAGGTCTCCCCACTCTGGTTTCCATGA...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGGATGGGGCAGACACTTaGCATGGTAGGAGAATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLDGADT*HGRRIS Trigger: TGAAATTCTCCTACCATGCCAAGTGTCTGCCCCATC...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR TCA 90 bp | CACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCCATGTGCCTGGTTGGTGACCTTTaGATCCTGGCACTCACACTG | + |
|
Preference number: 4 (lower is better) Translates to: HQHAYHYIIFIALCQAMCLVGDL*ILALTL Trigger: CAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAG...GCACATGGCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCTACCTGGCACGAACTTGTaGTTCTGCTTGCATTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: AVWKGKSGMLYCKNSATLPGTNL*FCLHSD Trigger: GTCAGAATGCAAGCAGAAGCACAAGTTCGTGCCAGG...TAGAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | GCAGTGTGGAAGGGAAAGTCAGGGATGCTCTATTGTAAAAACTCAGCCACTCTAACGAACTTGTGCTTCTaGTTGCATTCTGACCGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: AVWKGKSGMLYCKNSATLTNLCF*LHSDRV Trigger: CACTCGGTCAGAATGCAAGCAGAAGCACAAGTTCGT...TAGAGTGGCTGAGTTTTTACAATAGAGCATCCCTGACTTTCCCTTCCACACTGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | AAAAGGTACCCAGGAATCGGGACCCAGGAATTGTCTCTAACAGATGATCTTGCTAGGAGAATTTCACCCTaGCGTGGTTTAGCTCACATG | + |
|
Preference number: 4 (lower is better) Translates to: KRYPGIGTQELSLTDDLARRISP*RGLAHM Trigger: CATGTGAGCTAAACCACGGCAGGGTGAAATTCTCCT...AGCAAGATCATCTGTTAGAGACAATTCCTGGGTCCCGATTCCTGGGTACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGGTACCCAGGAATCGGGACCCAGGAATTGTCTCTAACAGATGATCTTGCTCACTGGCATGAATCATaGCTACTCTTATGCTGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: KRYPGIGTQELSLTDDLAHWHES*LLLCWP Trigger: AGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTG...AGCAAGATCATCTGTTAGAGACAATTCCTGGGTCCCGATTCCTGGGTACCTTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR GCA 90 bp | ACCAGGCCACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCGAGGTGGCCATTTTGTaGTGTTTCTTCTTCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TRPPACLPLHHIYSPLSSEVAIL*CFFFSS Trigger: TGAGGAGAAGAAGAAACAGCACAAAATGGCCACCTC...GCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTGGCCTGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| 3UTR CAA 72 bp | TACATCATATTTATAGCCCTCTGTCAAGCCATGTGCTaGGTGACACAGGCCTTCACTCATCAGGAGCAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: YIIFIALCQAMC*VTQAFTHQEQN Trigger: ATTCTGCTCCTGATGAGTGAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| 3UTR CAA 72 bp | TTTATGCTACTGTTTCTTGACTCAGAGCGTAAGGGATaGCAGTCCCACATTACTAGCAGAATTAGAAAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: FMLLFLDSERKG*QSHITSRIRKS Trigger: ACTTTTTCTAATTCTGCTAGTAATGTGGGACTGCAATCCCTTACGCTCTGAGTCAAGAAACAGTAGCATAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| 3UTR CAA 72 bp | TATCATTATTTATTGCCACATTTATGCTACTGTTTCTaGACTCAGAGCGTAAGGGATTGCAGTCCCACATTA | + |
|
Preference number: 4 (lower is better) Translates to: YHYLLPHLCYCF*TQSVRDCSPTL Trigger: TAATGTGGGACTGCAATCCCTTACGCTCTGAGTCAAGAAACAGTAGCATAAATGTGGCAATAAATAATGATA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS TCA 90 bp | GAGTGGACCTTGGCTGCGGCCACATTACGCTGGCAGTGTGAGCTGTaGGGCCGCCAGTGGGTGATTGCCACAGGTAGGCGCTGTGTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: EWTLAAATLRWQCEL*GRQWVIATGRRCVA Trigger: CGCCACACAGCGCCTACCTGTGGCAATCACCCACTGGCGGCCTCACAGCTCACACTGCCAGCGTAATGTGGCCGCAGCCAAGGTCCACTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 90 bp | GTTCACATCCAGCCCCACACGCCAGTCGTTATTGATATTAGCAGCTaGCTCCCGGGCCACACCCTCCGTGGAGTGGACCTTGGCTGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: VHIQPHTPVVIDISS*LPGHTLRGVDLGCG Trigger: GCCGCAGCCAAGGTCCACTCCACGGAGGGTGTGGCCCGGGAGGCAGCTGCTAATATCAATAACGACTGGCGTGTGGGGCTGGATGTGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS TCA 90 bp | AGGCAGTCTCCTACCTCATCAGCTGTGAGCCCATTCAGGGTCAGCTaGCAGGTACGCAGGGCTGTAAGGACCGAGATGCGGCCACCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: RQSPTSSAVSPFRVS*QVRRAVRTEMRPPR Trigger: CCTCGGTGGCCGCATCTCGGTCCTTACAGCCCTGCGTACCTGTCAGCTGACCCTGAATGGGCTCACAGCTGATGAGGTAGGAGACTGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | GCTTTGTATTCACTGGAGACGCTGGCTTGGGCACCGATGCTGACCTaGGCCTCCACGTTCAGGCAGTCTCCTACCTCATCAGCTGTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ALYSLETLAWAPMLT*ASTFRQSPTSSAVS Trigger: GCTCACAGCTGATGAGGTAGGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGAATACAAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS TCA 90 bp | CACAAGCTTTGTATTCACTGGAGACGCTGGCTTGGGCACCGATGCTaGCCTGGGCCTCCACGTTCAGGCAGTCTCCTACCTCATCAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HKLCIHWRRWLGHRC*PGPPRSGSLLPHQL Trigger: CAGCTGATGAGGTAGGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGAATACAAAGCTTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 90 bp | ACCAGACCAGGGTTGCTGGGCAGTGAGGCTGTCCAGGTTGAGAACTaGTCTGGTGTAGCTTGGTTCCCGAAGAGCAGATCATGCGTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: TRPGLLGSEAVQVEN*SGVAWFPKSRSCVE Trigger: CTCCACGCATGATCTGCTCTTCGGGAACCAAGCTACACCAGAGCAGTTCTCAACCTGGACAGCCTCACTGCCCAGCAACCCTGGTCTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | ATACACCTGGCACGAACTTGTGCTTCTGCTTGCATTCTGACCGAGTaGCAGTGTAGCAGGGAGCAGGGACAGGTCGTGGCAGCAGCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: IHLARTCASACILTE*QCSREQGQVVAAAG Trigger: TCCTGCTGCTGCCACGACCTGTCCCTGCTCCCTGCTACACTGCCACTCGGTCAGAATGCAAGCAGAAGCACAAGTTCGTGCCAGGTGTAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | TGTACTGGTCCTGATAGGTCTTCTCAGCTGCAAAATTGGCTACCTTaGAGTGGGAGCCAGCCACGGAGGCGCGCATGTTTGCCTCTGGCC | + |
|
Preference number: 5 (lower is better) Translates to: CTGPDRSSQLQNWLP*SGSQPRRRACLPLA Trigger: GGCCAGAGGCAAACATGCGCGCCTCCGTGGCTGGCTCCCACTCCAAGGTAGCCAATTTTGCAGCTGAGAAGACCTATCAGGACCAGTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | GAATCCTGGCACTCACACTGGCATGAATCATGGCTACTCTTATGCTaGCCTGACCTGCAGGGCCTGCTACAGTTCTGCCACCGGGCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: ESWHSHWHESWLLLC*PDLQGLLQFCHRAL Trigger: CAGAGCCCGGTGGCAGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS TCA 90 bp | CCAAATGGGCCAAGCCCCTCTGTCGTGGGCAGCAGTCCTGGTTGGTaGCCTTTGAATCCTGGCACTCACACTGGCATGAATCATGGCTAC | + |
|
Preference number: 5 (lower is better) Translates to: PNGPSPSVVGSSPGW*PLNPGTHTGMNHGY Trigger: GTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTGGCCCATTTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 90 bp | GCTGTGTGGCGTCTCTCATTAGGGAGTTTTTACAGAGGGTGCAGGTaGGGTCAGGCCTCAGGAACCTCTGTGTGTTCACTGGGAAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: AVWRLSLGSFYRGCR*GQASGTSVCSLGRS Trigger: GCTCCTTCCCAGTGAACACACAGAGGTTCCTGAGGCCTGACCGCACCTGCACCCTCTGTAAAAACTCCCTAATGAGAGACGCCACACAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 90 bp | GTAGGCGCTGTGTGGCGTCTCTCATTAGGGAGTTTTTACAGAGGGTaGAGGTGCGGTCAGGCCTCAGGAACCTCTGTGTGTTCACTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: VGAVWRLSLGSFYRG*RCGQASGTSVCSLG Trigger: TCCCAGTGAACACACAGAGGTTCCTGAGGCCTGACCGCACCTGCACCCTCTGTAAAAACTCCCTAATGAGAGACGCCACACAGCGCCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | GGGCAGCAGTCCTGGTTGGTGACCTTTGAATCCTGGCACTCACACTaGCATGAATCATGGCTACTCTTATGCTGGCCTGACCTGCAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: GQQSWLVTFESWHSH*HESWLLLCWPDLQG Trigger: GCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAGCAAAATTGGCTACCTaGGAGTGGGAGCCAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: VDPGWPRTHRYPPVSASQAKLAT*EWEPAT Trigger: CGTGGCTGGCTCCCACTCCAAGGTAGCCAATTTTGC...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGGGCAGCAGTCCTGGTaGGTGACCTTTGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QAGLELIDIHLSLPPKCWGQQSW*VTFESW Trigger: CCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCC...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | TTCTTCTTCTCCTCACAAGCTTTGTATTCACTGGAGACGCTGGCTTaGGCACCGATGCTGACCTGGGCCTCCACGTTCAGGCAGTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: FFFSSQALYSLETLA*APMLTWASTFRQSP Trigger: AGGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGAATACAAAGCTTGTGAGGAGAAGAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | CCCCTCTGTCGTGGGCAGCAGTCCTGGTTGGTGACCTTTGAATCCTaGCACTCACACTGGCATGAATCATGGCTACTCTTATGCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: PLCRGQQSWLVTFES*HSHWHESWLLLCWP Trigger: AGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCCACGACAGAGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | CTTACCACCAAATGGGCCAAGCCCCTCTGTCGTGGGCAGCAGTCCTaGTTGGTGACCTTTGAATCCTGGCACTCACACTGGCATGAATCA | + |
|
Preference number: 5 (lower is better) Translates to: LTTKWAKPLCRGQQS*LVTFESWHSHWHES Trigger: TGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTGGCCCATTTGGTGGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GCCAAGCTTTCGGGCATTGCAGGGCTGAGGCAGTGTGGAAGGGAAAGTCAGGGAAACTTGTGCTTCTGCTaGCATTCTGACCGAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: AKLSGIAGLRQCGRESQGNLCFC*HSDRVA Trigger: TGCCACTCGGTCAGAATGCAAGCAGAAGCACAAGTT...TCCCTGACTTTCCCTTCCACACTGCCTCAGCCCTGCAATGCCCGAAAGCTTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTATCCACCAGACCAGGGTaGCTGGGCAGTGAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPRTHRYPPVSASQMLGLSTRPG*LGSEAV Trigger: GACAGCCTCACTGCCCAGCAACCCTGGTCTGGTGGA...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGTCCACCAGACCAGGGTaGCTGGGCAGTGAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLSTRPG*LGSEAV Trigger: GACAGCCTCACTGCCCAGCAACCCTGGTCTGGTGGA...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | ACCCTGCCGTGGTTTAGCTCACATGTCACCTCATGGAAACCAGAGTaGGGAGACCTGTCACAAGAACCAAGAAGGTCATCATCCCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: TLPWFSSHVTSWKPE*GDLSQEPRRSSSQP Trigger: CGGCTGGGATGATGACCTTCTTGGTTCTTGTGACAGGTCTCCCCACTCTGGTTTCCATGAGGTGACATGTGAGCTAAACCACGGCAGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GTAGACCCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAATGTTCTGCCCGGAAATaGCTTACCACCAAATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: VDPGWPRTHRYPPVSASQCSARK*LTTKWA Trigger: GGCCCATTTGGTGGTAAGCAATTTCCGGGCAGAACA...TTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGGGTCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 90 bp | TGTGTCGCTATTAAAGTTGTACTGGTCCTGATAGGTCTTCTCAGCTaGAAAATTGGCTACCTTGGAGTGGGAGCCAGCCACGGAGGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: CVAIKVVLVLIGLLS*KIGYLGVGASHGGA Trigger: CGCGCCTCCGTGGCTGGCTCCCACTCCAAGGTAGCCAATTTTGCAGCTGAGAAGACCTATCAGGACCAGTACAACTTTAATAGCGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | TGGTTGGTGACCTTTGAATCCTGGCACTCACACTGGCATGAATCATaGCTACTCTTATGCTGGCCTGACCTGCAGGGCCTGCTACAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: WLVTFESWHSHWHES*LLLCWPDLQGLLQF Trigger: GAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGAACTTGTGCTTCTGCTaGCATTCTGACCGAGTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: QAGLELIDIHLSLPPKCWNLCFC*HSDRVA Trigger: TGCCACTCGGTCAGAATGCAAGCAGAAGCACAAGTT...CCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGGCAAAATTGGCTACCTaGGAGTGGGAGCCAGCCACG | + |
|
Preference number: 5 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLAKLAT*EWEPAT Trigger: CGTGGCTGGCTCCCACTCCAAGGTAGCCAATTTTGC...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTAGGGCAGCAGTCCTGGTaGGTGACCTTTGAATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WPRTHRYPPVSASQMLGLGQQSW*VTFESW Trigger: CCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCC...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGTTCTCCTCACAAGCTTaGTATTCACTGGAGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGWPRTHRYPPVSASQMLFSSQA*YSLETL Trigger: CAGCGTCTCCAGTGAATACAAAGCTTGTGAGGAGAA...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | TGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATTACACCGGGGATTGTTATaGTTCCACACGACACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: WPRTHRYPPVSASQMLGLHRGLL*FHTTPV Trigger: GACCGGTGTCGTGTGGAACAATAACAATCCCCGGTG...TAATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGGGATGTGGAGTGGAGGTTTTaGTACCAGGCGAAAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: AGLELIDIHLSLPPKCWDVEWRF*YQAKTV Trigger: TACAGTTTTCGCCTGGTACAAAAACCTCCACTCCAC...ATCCCAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | CCAGGCTGGCCTCGAACTCATAGATATCCACCTGTCTCTGCCTCCCAAATGCTGAAAGAGGTGGCCATTTaGTGCTGTTTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: PGWPRTHRYPPVSASQMLKEVAI*CCFFFS Trigger: GGAGAAGAAGAAACAGCACAAAATGGCCACCTCTTT...CAGCATTTGGGAGGCAGAGACAGGTGGATATCTATGAGTTCGAGGCCAGCCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GCTGGGATTAAAGGCGTGTGCTACTACACCCAGCTCTCAGGCATGTTATTGTTGTGTTCTGCCCGGAAATaGCTTACCACCAAATGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: AGIKGVCYYTQLSGMLLLCSARK*LTTKWA Trigger: GGCCCATTTGGTGGTAAGCAATTTCCGGGCAGAACA...CAACAATAACATGCCTGAGAGCTGGGTGTAGTAGCACACGCCTTTAATCCCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | TACATCATATTTATAGCCCTCTGTCAAGCCATGTGCTTGGTGACACAGGCCTTCCACCGGGGATTGTTATaGTTCCACACGACACCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: YIIFIALCQAMCLVTQAFHRGLL*FHTTPV Trigger: GACCGGTGTCGTGTGGAACAATAACAATCCCCGGTG...GAAGGCCTGTGTCACCAAGCACATGGCTTGACAGAGGGCTATAAATATGATGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS CCA 90 bp | CAAGTACTTCGACGTGACGCTCACGGTAGGTCTGGTGGAAAGAGGTaGCCATTTTGTGCTGTTTCTTCTTCTCCTCACAAGCTTTGTATT | + |
|
Preference number: 5 (lower is better) Translates to: QVLRRDAHGRSGGKR*PFCAVSSSPHKLCI Trigger: AATACAAAGCTTGTGAGGAGAAGAAGAAACAGCACAAAATGGCCACCTCTTTCCACCAGACCTACCGTGAGCGTCACGTCGAAGTACTTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | ACCAGGCCACCAGCATGCTTACCATTACATCATATTTATAGCCCTCTGTCAAGCTTCTCCTCACAAGCTTaGTATTCACTGGAGACGCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRPPACLPLHHIYSPLSSFSSQA*YSLETL Trigger: CAGCGTCTCCAGTGAATACAAAGCTTGTGAGGAGAA...GCTTGACAGAGGGCTATAAATATGATGTAATGGTAAGCATGCTGGTGGCCTGGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS-3UTR CAA 90 bp | GAGCGTAAGGGATTGCAGTCCCACATTACTAGCAGAATTAGAAAAAGTAGTTCAAAAGAGGTGGCCATTTaGTGCTGTTTCTTCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ERKGLQSHITSRIRKSSSKEVAI*CCFFFS Trigger: GGAGAAGAAGAAACAGCACAAAATGGCCACCTCTTT...TGAACTACTTTTTCTAATTCTGCTAGTAATGTGGGACTGCAATCCCTTACGCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000219375.2 |
||
| CDS CAA 72 bp | GCTGCCTCCCGGGCCACACCCTCCGTGGAGTGGACCTaGGCTGCGGCCACATTACGCTGGCAGTGTGAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: AASRATPSVEWT*AAATLRWQCEL Trigger: CAGCTCACACTGCCAGCGTAATGTGGCCGCAGCCAAGGTCCACTCCACGGAGGGTGTGGCCCGGGAGGCAGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 72 bp | CTGCCTCCCGGGCCACACCCTCCGTGGAGTGGACCTTaGCTGCGGCCACATTACGCTGGCAGTGTGAGCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LPPGPHPPWSGP*LRPHYAGSVSC Trigger: ACAGCTCACACTGCCAGCGTAATGTGGCCGCAGCCAAGGTCCACTCCACGGAGGGTGTGGCCCGGGAGGCAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 72 bp | GTGGGAGCCAGCCACGGAGGCGCGCATGTTTGCCTCTaGCCTAGGGTTCACATCCAGCCCCACACGCCAGTC | + |
|
Preference number: 6 (lower is better) Translates to: VGASHGGAHVCL*PRVHIQPHTPV Trigger: GACTGGCGTGTGGGGCTGGATGTGAACCCTAGGCCAGAGGCAAACATGCGCGCCTCCGTGGCTGGCTCCCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS GCA 72 bp | CTTGGAGTGGGAGCCAGCCACGGAGGCGCGCATGTTTaGCTCTGGCCTAGGGTTCACATCCAGCCCCACACG | + |
|
Preference number: 6 (lower is better) Translates to: LGVGASHGGAHV*LWPRVHIQPHT Trigger: CGTGTGGGGCTGGATGTGAACCCTAGGCCAGAGGCAAACATGCGCGCCTCCGTGGCTGGCTCCCACTCCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 72 bp | TTAGCAGCTGCCTCCCGGGCCACACCCTCCGTGGAGTaGACCTTGGCTGCGGCCACATTACGCTGGCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: LAAASRATPSVE*TLAAATLRWQC Trigger: ACACTGCCAGCGTAATGTGGCCGCAGCCAAGGTCCACTCCACGGAGGGTGTGGCCCGGGAGGCAGCTGCTAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS TCA 72 bp | TTGGCTGCGGCCACATTACGCTGGCAGTGTGAGCTGTaGGGCCGCCAGTGGGTGATTGCCACAGGTAGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: LAAATLRWQCEL*GRQWVIATGRR Trigger: GCGCCTACCTGTGGCAATCACCCACTGGCGGCCTCACAGCTCACACTGCCAGCGTAATGTGGCCGCAGCCAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS TCA 72 bp | GTGGACCTTGGCTGCGGCCACATTACGCTGGCAGTGTaGGCTGTGAGGCCGCCAGTGGGTGATTGCCACAGG | + |
|
Preference number: 6 (lower is better) Translates to: VDLGCGHITLAV*AVRPPVGDCHR Trigger: CCTGTGGCAATCACCCACTGGCGGCCTCACAGCTCACACTGCCAGCGTAATGTGGCCGCAGCCAAGGTCCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
||
| CDS CCA 72 bp | GGTGCGGTCAGGCCTCAGGAACCTCTGTGTGTTCACTaGGAAGGAGCCGGAGCGGCGGAGGGTAGTCACATC | + |
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Preference number: 6 (lower is better) Translates to: GAVRPQEPLCVH*EGAGAAEGSHI Trigger: GATGTGACTACCCTCCGCCGCTCCGGCTCCTTCCCAGTGAACACACAGAGGTTCCTGAGGCCTGACCGCACC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 90 bp | GCCTCTGGCCTAGGGTTCACATCCAGCCCCACACGCCAGTCGTTATaGATATTAGCAGCTGCCTCCCGGGCCACACCCTCCGTGGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: ASGLGFTSSPTRQSL*ILAAASRATPSVEW Trigger: CCACTCCACGGAGGGTGTGGCCCGGGAGGCAGCTGCTAATATCAATAACGACTGGCGTGTGGGGCTGGATGTGAACCCTAGGCCAGAGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS TCA 72 bp | CATCCCAGCCGTAGTCGGCATCCCAGACCTGCACCCTaGGGGGTCCCCCTGTGGACAGGAGCACATTCTCAA | + |
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Preference number: 6 (lower is better) Translates to: HPSRSRHPRPAP*GVPLWTGAHSQ Trigger: TTGAGAATGTGCTCCTGTCCACAGGGGGACCCCTCAGGGTGCAGGTCTGGGATGCCGACTACGGCTGGGATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | TCACTGGAGACGCTGGCTTGGGCACCGATGCTGACCTaGGCCTCCACGTTCAGGCAGTCTCCTACCTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SLETLAWAPMLT*ASTFRQSPTSS Trigger: TGATGAGGTAGGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS TCA 72 bp | CCTCCACGTTCAGGCAGTCTCCTACCTCATCAGCTGTaGGCCCATTCAGGGTCAGCTGACAGGTACGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: PPRSGSLLPHQL*AHSGSADRYAG Trigger: CCCTGCGTACCTGTCAGCTGACCCTGAATGGGCTCACAGCTGATGAGGTAGGAGACTGCCTGAACGTGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS TCA 72 bp | TGTATTCACTGGAGACGCTGGCTTGGGCACCGATGCTaGCCTGGGCCTCCACGTTCAGGCAGTCTCCTACCT | + |
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Preference number: 6 (lower is better) Translates to: CIHWRRWLGHRC*PGPPRSGSLLP Trigger: AGGTAGGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGAATACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | GGCATGAATCATGGCTACTCTTATGCTGGCCTGACCTaGAGGGCCTGCTACAGTTCTGCCACCGGGCTCTGC | + |
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Preference number: 6 (lower is better) Translates to: GMNHGYSYAGLT*RACYSSATGLC Trigger: GCAGAGCCCGGTGGCAGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 72 bp | CTAGGGTTCACATCCAGCCCCACACGCCAGTCGTTATaGATATTAGCAGCTGCCTCCCGGGCCACACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: LGFTSSPTRQSL*ILAAASRATPS Trigger: GGAGGGTGTGGCCCGGGAGGCAGCTGCTAATATCAATAACGACTGGCGTGTGGGGCTGGATGTGAACCCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | GCACGAACTTGTGCTTCTGCTTGCATTCTGACCGAGTaGCAGTGTAGCAGGGAGCAGGGACAGGTCGTGGCA | + |
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Preference number: 6 (lower is better) Translates to: ARTCASACILTE*QCSREQGQVVA Trigger: TGCCACGACCTGTCCCTGCTCCCTGCTACACTGCCACTCGGTCAGAATGCAAGCAGAAGCACAAGTTCGTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | AAATGGGCCAAGCCCCTCTGTCGTGGGCAGCAGTCCTaGTTGGTGACCTTTGAATCCTGGCACTCACACTGG | + |
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Preference number: 6 (lower is better) Translates to: KWAKPLCRGQQS*LVTFESWHSHW Trigger: CCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTGGCCCATTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 90 bp | ACCACCAAATGGGCCAAGCCCCTCTGTCGTGGGCAGCAGTCCTGGTaGGTGACCTTTGAATCCTGGCACTCACACTGGCATGAATCATGG | + |
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Preference number: 6 (lower is better) Translates to: TTKWAKPLCRGQQSW*VTFESWHSHWHESW Trigger: CCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGTCACCAACCAGGACTGCTGCCCACGACAGAGGGGCTTGGCCCATTTGGTGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 90 bp | TTTCTTCTTCTCCTCACAAGCTTTGTATTCACTGGAGACGCTGGCTaGGGCACCGATGCTGACCTGGGCCTCCACGTTCAGGCAGTCTCC | + |
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Preference number: 6 (lower is better) Translates to: FLLLLTSFVFTGDAG*GTDADLGLHVQAVS Trigger: GGAGACTGCCTGAACGTGGAGGCCCAGGTCAGCATCGGTGCCCAAGCCAGCGTCTCCAGTGAATACAAAGCTTGTGAGGAGAAGAAGAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | CCATCCATACACCTGGCACGAACTTGTGCTTCTGCTTaGATTCTGACCGAGTGGCAGTGTAGCAGGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: PSIHLARTCASA*ILTEWQCSREQ Trigger: CTGCTCCCTGCTACACTGCCACTCGGTCAGAATGCAAGCAGAAGCACAAGTTCGTGCCAGGTGTATGGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | CATGGCTACTCTTATGCTGGCCTGACCTGCAGGGCCTaGTACAGTTCTGCCACCGGGCTCTGCTCATTATAT | + |
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Preference number: 6 (lower is better) Translates to: HGYSYAGLTCRA*YSSATGLCSLY Trigger: ATATAATGAGCAGAGCCCGGTGGCAGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | TGGCACTCACACTGGCATGAATCATGGCTACTCTTATaGTGGCCTGACCTGCAGGGCCTGCTACAGTTCTGC | + |
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Preference number: 6 (lower is better) Translates to: WHSHWHESWLLL*WPDLQGLLQFC Trigger: GCAGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | TGGTGTAGTCTCCCCACAGATGTTCTGCCCGGAAATTaGTTACCACCAAATGGGCCAAGCCCCTCTGTCGTG | + |
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Preference number: 6 (lower is better) Translates to: WCSLPTDVLPGN*LPPNGPSPSVV Trigger: CACGACAGAGGGGCTTGGCCCATTTGGTGGTAAGCAATTTCCGGGCAGAACATCTGTGGGGAGACTACACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | CACTCACACTGGCATGAATCATGGCTACTCTTATGCTaGCCTGACCTGCAGGGCCTGCTACAGTTCTGCCAC | + |
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Preference number: 6 (lower is better) Translates to: HSHWHESWLLLC*PDLQGLLQFCH Trigger: GTGGCAGAACTGTAGCAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | CGTCTCTCATTAGGGAGTTTTTACAGAGGGTGCAGGTaGGGTCAGGCCTCAGGAACCTCTGTGTGTTCACTG | + |
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Preference number: 6 (lower is better) Translates to: RLSLGSFYRGCR*GQASGTSVCSL Trigger: CAGTGAACACACAGAGGTTCCTGAGGCCTGACCGCACCTGCACCCTCTGTAAAAACTCCCTAATGAGAGACG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | ACCTTTGAATCCTGGCACTCACACTGGCATGAATCATaGCTACTCTTATGCTGGCCTGACCTGCAGGGCCTG | + |
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Preference number: 6 (lower is better) Translates to: TFESWHSHWHES*LLLCWPDLQGL Trigger: CAGGCCCTGCAGGTCAGGCCAGCATAAGAGTAGCCATGATTCATGCCAGTGTGAGTGCCAGGATTCAAAGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 90 bp | GACAGGAGCACATTCTCAAAGTCCATCTTGTCAGTCCACCGGGGATaGTTATTGTTCCACACGACACCGGTCCTGAACTCCTGGCCACCA | + |
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Preference number: 6 (lower is better) Translates to: DRSTFSKSILSVHRG*LLFHTTPVLNSWPP Trigger: TGGTGGCCAGGAGTTCAGGACCGGTGTCGTGTGGAACAATAACAATCCCCGGTGGACTGACAAGATGGACTTTGAGAATGTGCTCCTGTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS TCA 72 bp | ACCGGGGATTGTTATTGTTCCACACGACACCGGTCCTaGACTCCTGGCCACCAAAGAAGACCTTTAGGTAGG | + |
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Preference number: 6 (lower is better) Translates to: TGDCYCSTRHRS*TPGHQRRPLGR Trigger: CCTACCTAAAGGTCTTCTTTGGTGGCCAGGAGTTCAGGACCGGTGTCGTGTGGAACAATAACAATCCCCGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | CGACGTGACGCTCACGGTAGGTCTGGTGGAAAGAGGTaGCCATTTTGTGCTGTTTCTTCTTCTCCTCACAAG | + |
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Preference number: 6 (lower is better) Translates to: RRDAHGRSGGKR*PFCAVSSSPHK Trigger: CTTGTGAGGAGAAGAAGAAACAGCACAAAATGGCCACCTCTTTCCACCAGACCTACCGTGAGCGTCACGTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 90 bp | AGCACATTCTCAAAGTCCATCTTGTCAGTCCACCGGGGATTGTTATaGTTCCACACGACACCGGTCCTGAACTCCTGGCCACCAAAGAAG | + |
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Preference number: 6 (lower is better) Translates to: STFSKSILSVHRGLL*FHTTPVLNSWPPKK Trigger: CTTCTTTGGTGGCCAGGAGTTCAGGACCGGTGTCGTGTGGAACAATAACAATCCCCGGTGGACTGACAAGATGGACTTTGAGAATGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CAA 72 bp | ACATTCTCAAAGTCCATCTTGTCAGTCCACCGGGGATaGTTATTGTTCCACACGACACCGGTCCTGAACTCC | + |
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Preference number: 6 (lower is better) Translates to: TFSKSILSVHRG*LLFHTTPVLNS Trigger: GGAGTTCAGGACCGGTGTCGTGTGGAACAATAACAATCCCCGGTGGACTGACAAGATGGACTTTGAGAATGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS GCA 72 bp | ATTAAAGTTGTACTGGTCCTGATAGGTCTTCTCAGCTaGAAAATTGGCTACCTTGGAGTGGGAGCCAGCCAC | + |
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Preference number: 6 (lower is better) Translates to: IKVVLVLIGLLS*KIGYLGVGASH Trigger: GTGGCTGGCTCCCACTCCAAGGTAGCCAATTTTGCAGCTGAGAAGACCTATCAGGACCAGTACAACTTTAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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| CDS CCA 72 bp | TGGTTTAGCTCACATGTCACCTCATGGAAACCAGAGTaGGGAGACCTGTCACAAGAACCAAGAAGGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: WFSSHVTSWKPE*GDLSQEPRRSS Trigger: TGATGACCTTCTTGGTTCTTGTGACAGGTCTCCCCACTCTGGTTTCCATGAGGTGACATGTGAGCTAAACCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000035419.7 ENSMUST00000219375.2 |
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