Pregenerated sensors for PREPL (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024127Ensembl transcript IDs: ENSMUST00000072406.5, ENSMUST00000171795.9, ENSMUST00000234393.2, ENSMUST00000234676.2
Found 151 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCACGAAGGCTCCCCTCCATCAGCAGGCCGCTTTCAGAGACAGATaGTTTGTTTCCAGTCGGGCGTGCTACTCCAGTGCACTGGACATC | + |
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Preference number: 1 (lower is better) Translates to: STKAPLHQQAAFRDR*FVSSRACYSSALDI Trigger: GATGTCCAGTGCACTGGAGTAGCACGCCCGACTGGAAACAAAGCATCTGTCTCTGAAAGCGGCCTGCTGATGGAGGGGAGCCTTCGTGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR GCA 90 bp | AGTCTACTCCATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTTaGCTCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: SLLHATELVLSRGWF*LLRDDSHSVVYTRE Trigger: CTCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTGAGGACCAGCTCTGTGGCATGGAGTAGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CCA 90 bp | CCACCCAGAACATCACGTACGCACAGGGCTGAGCAGACTCATGAATaGCATCAATTCTTAGATATTTCTGTAGCACGAATGCACTGTTTT | + |
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Preference number: 1 (lower is better) Translates to: PPRTSRTHRAEQTHE*HQFLDISVARMHCF Trigger: AAAACAGTGCATTCGTGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTGCGTACGTGATGTTCTGGGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CCA 90 bp | CATTTAAATATGAAGAATGCTATCCTTTTCTTTAAAGTGGAGTTGTaGAAATTGCAAGGTGACTCACAGCCACAGCGCCTACAAATATTC | + |
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Preference number: 1 (lower is better) Translates to: HLNMKNAILFFKVEL*KLQGDSQPQRLQIF Trigger: GAATATTTGTAGGCGCTGTGGCTGTGAGTCACCTTGCAATTTCCACAACTCCACTTTAAAGAAAAGGATAGCATTCTTCATATTTAAATG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CAA 90 bp | CGAAGGCTCCCCTCCATCAGCAGGCCGCTTTCAGAGACAGATGCTTaGTTTCCAGTCGGGCGTGCTACTCCAGTGCACTGGACATCCTCT | + |
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Preference number: 2 (lower is better) Translates to: RRLPSISRPLSETDA*FPVGRATPVHWTSS Trigger: AGAGGATGTCCAGTGCACTGGAGTAGCACGCCCGACTGGAAACAAAGCATCTGTCTCTGAAAGCGGCCTGCTGATGGAGGGGAGCCTTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CAA 90 bp | GAGTCTACTCCATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTaGCCTCTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: ESTPCHRAGPQPGLV*PLERRQSLCGVHKR Trigger: TCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTGAGGACCAGCTCTGTGGCATGGAGTAGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR GCA 90 bp | CCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCCGCTTTCAGAGACAGATaGTTTGTTTCCAGTCGGGCG | + |
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Preference number: 2 (lower is better) Translates to: PKAVLLTPVPFLWRRERAAFRDR*FVSSRA Trigger: CGCCCGACTGGAAACAAAGCATCTGTCTCTGAAAGC...GGCCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR CCA 90 bp | CTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTAAGCTCCCTAAGAGATaGCCACCCAGAACATCACGT | + |
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Preference number: 2 (lower is better) Translates to: LPPELRIRLSTNSASKGSKLPKR*PPRTSR Trigger: ACGTGATGTTCTGGGTGGCCATCTCTTAGGGAGCTT...ACTGCCTTTGGAGGCTGAGTTGGTACTTAACCTTATTCTCAGCTCTGGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR CCA 90 bp | CAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACGGGGGTGTGTGCTGGTaGGAACAGTATGAGCAAGTA | + |
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Preference number: 2 (lower is better) Translates to: QGIISDLPPELRIRLSTNGGVCW*EQYEQV Trigger: TACTTGCTCATACTGTTCCCACCAGCACACACCCCC...GTTGGTACTTAACCTTATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR TCA 90 bp | TGCTTTATAATTGGGCAGTTATTTACTTACTTGGACAGTGTAAAGGGCAAACAGATTCTGTTAAAAGACTaGTTGGGAGGCCAGGCGTTC | + |
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Preference number: 2 (lower is better) Translates to: CFIIGQLFTYLDSVKGKQILLKD*LGGQAF Trigger: GAACGCCTGGCCTCCCAATCAGTCTTTTAACAGAAT...CTGTTTGCCCTTTACACTGTCCAAGTAAGTAAATAACTGCCCAATTATAAAGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CAA 90 bp | AATATGAAGAATGCTATCCTTTTCTTTAAAGTGGAGTTGTGGAAATaGCAAGGTGACTCACAGCCACAGCGCCTACAAATATTCACTAGC | + |
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Preference number: 2 (lower is better) Translates to: NMKNAILFFKVELWK*QGDSQPQRLQIFTS Trigger: GCTAGTGAATATTTGTAGGCGCTGTGGCTGTGAGTCACCTTGCAATTTCCACAACTCCACTTTAAAGAAAAGGATAGCATTCTTCATATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR CCA 90 bp | ATCATCAACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTTTTAAAGTGGAGTTGTaGAAATTGCAAGGTGACTCA | + |
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Preference number: 2 (lower is better) Translates to: IINCAKSTGDHFRSSSRAFKVEL*KLQGDS Trigger: TGAGTCACCTTGCAATTTCCACAACTCCACTTTAAA...AGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTTGATGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR GCA 72 bp | GCTCCCCTCCATCAGCAGGCCGCTTTCAGAGACAGATaGTTTGTTTCCAGTCGGGCGTGCTACTCCAGTGCA | + |
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Preference number: 3 (lower is better) Translates to: APLHQQAAFRDR*FVSSRACYSSA Trigger: TGCACTGGAGTAGCACGCCCGACTGGAAACAAAGCATCTGTCTCTGAAAGCGGCCTGCTGATGGAGGGGAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR GCA 72 bp | CATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTTaGCTCTTGAGAGACGACAGTCACTCTGTGGTGTAC | + |
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Preference number: 3 (lower is better) Translates to: HATELVLSRGWF*LLRDDSHSVVY Trigger: GTACACCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTGAGGACCAGCTCTGTGGCATG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR TCA 72 bp | GTTAAGTACCAACTCAGCCTCCAAAGGCAGTGCTGTTaGCACCCGTGCCATTTCTCTGGAGAAGGGAGAGGG | + |
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Preference number: 3 (lower is better) Translates to: VKYQLSLQRQCC*HPCHFSGEGRG Trigger: CCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGGAGGCTGAGTTGGTACTTAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CCA 72 bp | GCTTTGTTTCCAGTCGGGCGTGCTACTCCAGTGCACTaGACATCCTCTATAGCTCGTGTTAGGAAGGAAGCT | + |
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Preference number: 3 (lower is better) Translates to: ALFPVGRATPVH*TSSIARVRKEA Trigger: AGCTTCCTTCCTAACACGAGCTATAGAGGATGTCCAGTGCACTGGAGTAGCACGCCCGACTGGAAACAAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR-3UTR CAA 90 bp | GTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGGTTCTGAATGTGGAGTTGTGGAAATaGCAAGGTGACTCACAGCCA | + |
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Preference number: 3 (lower is better) Translates to: VYTRELDGIDNVFLVVLNVELWK*QGDSQP Trigger: TGGCTGTGAGTCACCTTGCAATTTCCACAACTCCAC...ATTCAGAACCACGAGGAAGACGTTATCTATGCCGTCCAGCTCTCTTGTGTACAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR GCA 72 bp | ATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGTaGTGGTGGGAACAGTATGAGCAAGTATTAAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: MMENDFPRPGGV*WWEQYEQVLSK Trigger: TTTGCTTAATACTTGCTCATACTGTTCCCACCAGCACACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| 3UTR CAA 72 bp | CCATGCCACAGAGCTGGTCCTCAGCCGGGGCTGGTTTaGCCTCTTGAGAGACGACAGTCACTCTGTGGTGTA | + |
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Preference number: 4 (lower is better) Translates to: PCHRAGPQPGLV*PLERRQSLCGV Trigger: TACACCACAGAGTGACTGTCGTCTCTCAAGAGGCAAAACCAGCCCCGGCTGAGGACCAGCTCTGTGGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | CTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGACTGAATAAGGACTGGTaGGTCCCACGGGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LERRQSLCGVHKRAGRHRLNKDW*VPRAQA Trigger: GGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAG...TCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | CCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCCCCCGCTTTTCAGGCCTaGAATTCATTTTCAGGTCCA | + |
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Preference number: 4 (lower is better) Translates to: PKAVLLTPVPFLWRRERAPAFQA*NSFSGP Trigger: TGGACCTGAAAATGAATTTCAGGCCTGAAAAGCGGG...GGCCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | CCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCCCAGCTTCTTCGTCTTTaGAACGAACCAAGCAGCAAC | + |
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Preference number: 4 (lower is better) Translates to: PKAVLLTPVPFLWRRERAQLLRL*NEPSSN Trigger: GTTGCTGCTTGGTTCGTTCCAAAGACGAAGAAGCTG...GGCCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGATTGGAGAGCAAAGCTaGAAGGGGCAGTTCTTTGGG | + |
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Preference number: 4 (lower is better) Translates to: YILLRSMMENDFPRPGGVIGEQS*KGQFFG Trigger: CCCAAAGAACTGCCCCTTTCAGCTTTGCTCTCCAAT...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | CCAAAGGCAGTGCTGTTGACACCCGTGCCATTTCTCTGGAGAAGGGAGAGGGCCATTTCATCTGGGTTGTaGTCTTTTTGTGAGAATCCT | + |
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Preference number: 4 (lower is better) Translates to: PKAVLLTPVPFLWRRERAISSGL*SFCENP Trigger: AGGATTCTCACAAAAAGATCACAACCCAGATGAAAT...GGCCCTCTCCCTTCTCCAGAGAAATGGCACGGGTGTCAACAGCACTGCCTTTGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | CTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGAGCTTCCATTACAGGCTaGTCACTGAGCTTCACAACT | + |
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Preference number: 4 (lower is better) Translates to: LERRQSLCGVHKRAGRHRASITG*SLSFTT Trigger: AGTTGTGAAGCTCAGTGACCAGCCTGTAATGGAAGC...TCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | CACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGATAACGTCTTCCTCGTGAATTTGTATCCATTATaGATCCACAGGCCCAAGGCG | + |
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Preference number: 4 (lower is better) Translates to: HSVVYTRELDGIDNVFLVNLYPL*IHRPKA Trigger: CGCCTTGGGCCTGTGGATTCATAATGGATACAAATT...CACGAGGAAGACGTTATCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR GCA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGTGCTTTTGGCTTCTATaGGTAAAACACGGCTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: YILLRSMMENDFPRPGGVCFWLL*VKHGWS Trigger: AGACCAGCCGTGTTTTACGCATAGAAGCCAAAAGCA...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | GTTCTCCTGCCCCAGTCCTTCTGGCTCCCTTCTCTACATCCTACTGAGGAGCATTTCCATCCTTGCTTTTaGCTTCTATGCGTAAAACAC | + |
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Preference number: 4 (lower is better) Translates to: VLLPQSFWLPSLHPTEEHFHPCF*LLCVKH Trigger: GTGTTTTACGCATAGAAGCCAAAAGCAAGGATGGAA...ATGCTCCTCAGTAGGATGTAGAGAAGGGAGCCAGAAGGACTGGGGCAGGAGAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | AACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATGCACACCTCCAGCACTaGAAGCGCTCAGCGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: NCAKSTGDHFRSSSRAENAHLQH*KRSALL Trigger: TAACAACGCTGAGCGCTTTCAGTGCTGGAGGTGTGC...ATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGGTTGTGATCTTTTTGTaGGAATCCTCAATCACGTGG | + |
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Preference number: 4 (lower is better) Translates to: YILLRSMMENDFPRPGGVVVIFL*ESSITW Trigger: CCACGTGATTGAGGATTCTCACAAAAAGATCACAAC...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | AATTCTGTTAAAAGACTGATTGGGAGGCCAGGCGTTCTCCTGTTCTCCTGCCCCAGGAACAGAACACAGTaGTCCTTAAACATGTCCAAG | + |
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Preference number: 4 (lower is better) Translates to: NSVKRLIGRPGVLLFSCPRNRTQ*SLNMSK Trigger: CTTGGACATGTTTAAGGACCACTGTGTTCTGTTCCT...GGGGCAGGAGAACAGGAGAACGCCTGGCCTCCCAATCAGTCTTTTAACAGAATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | AACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATGAAAAGCCCTGGCTGTaGAGCGTCTTAATGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: NCAKSTGDHFRSSSRAENEKPWL*SVLMQA Trigger: GGCTTGCATTAAGACGCTTCACAGCCAGGGCTTTTC...ATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR GCA 90 bp | CTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGACTAACTTTCCATCCTTaGTTTTGGCTTCTATGCGTA | + |
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Preference number: 4 (lower is better) Translates to: LERRQSLCGVHKRAGRHRLTFHP*FWLLCV Trigger: TACGCATAGAAGCCAAAAGCAAGGATGGAAAGTTAG...TCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCTGAATAAGGACTGGTaGGTCCCACGGGCTCAGGCC | + |
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Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECLNKDW*VPRAQA Trigger: GGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR CCA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGTGTGAAAAACTGTCATaGGCACTAACTTTCCATCCT | + |
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Preference number: 4 (lower is better) Translates to: YILLRSMMENDFPRPGGVCEKLS*ALTFHP Trigger: AGGATGGAAAGTTAGTGCCCATGACAGTTTTTCACA...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGCAATCAATGAAAGGCTaGTCCAATTTAAGTTCTTCC | + |
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Preference number: 4 (lower is better) Translates to: YILLRSMMENDFPRPGGVQSMKG*SNLSSS Trigger: GGAAGAACTTAAATTGGATCAGCCTTTCATTGATTG...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | CTTCCTCCAGAGCTGAGAATAAGGTTAAGTACCAACTCAGCCTCCAAAGGCAGTTATCCAACATGGTATTaGGGACATCCAAGAAAGGTG | + |
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Preference number: 4 (lower is better) Translates to: LPPELRIRLSTNSASKGSYPTWY*GHPRKV Trigger: CACCTTTCTTGGATGTCCTCAATACCATGTTGGATA...ACTGCCTTTGGAGGCTGAGTTGGTACTTAACCTTATTCTCAGCTCTGGAGGAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGCACACCTCCAGCACTaGAAGCGCTCAGCGTTGTTA | + |
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Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSAHLQH*KRSALL Trigger: TAACAACGCTGAGCGCTTTCAGTGCTGGAGGTGTGC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR TCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCCGTGTATCCTCTTCTaGATAAGGACTGGTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECPCILF*IRTGGS Trigger: GGACCCACCAGTCCTTATTCAGAAGAGGATACACGG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCCCGTGTATCCTCTTCTaGATAAGGACTGGTGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSPCILF*IRTGGS Trigger: GGACCCACCAGTCCTTATTCAGAAGAGGATACACGG...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR TCA 90 bp | TGGAGAATCATCAACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCGTAATCGGATCTTCGTaGCCAGTTTCCTCAAACAGT | + |
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Preference number: 4 (lower is better) Translates to: WRIINCAKSTGDHFRSSSVIGSS*PVSSNS Trigger: ACTGTTTGAGGAAACTGGTCACGAAGATCCGATTAC...GGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTTGATGATTCTCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR TCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGAAAAGCCCTGGCTGTaGAGCGTCTTAATGCAAGCC | + |
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Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECEKPWL*SVLMQA Trigger: GGCTTGCATTAAGACGCTTCACAGCCAGGGCTTTTC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR GCA 90 bp | AGTCCTTCTGGCTCCCTTCTCTACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTCAAACAGTTTaGCTTCTGCAAATTTGTATG | + |
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Preference number: 4 (lower is better) Translates to: SPSGSLLYILLRSMMENDFPQTV*LLQICM Trigger: CATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAA...GTCGTTTTCCATCATGCTCCTCAGTAGGATGTAGAGAAGGGAGCCAGAAGGACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | AACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATTTCGTACTCTTCCTGTaGCTGTGTTTCCAGTCTTGT | + |
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Preference number: 4 (lower is better) Translates to: NCAKSTGDHFRSSSRAENFVLFL*LCFQSC Trigger: ACAAGACTGGAAACACAGCCACAGGAAGAGTACGAA...ATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | TGCTTTATAATTGGGCAGTTATTTACTTACTTGGACAGTGTAAAGGGCAAACAGGCTCGATACACATCGTaGCAGCGAAGGTTCCTTTGG | + |
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Preference number: 4 (lower is better) Translates to: CFIIGQLFTYLDSVKGKQARYTS*QRRFLW Trigger: CCAAAGGAACCTTCGCTGCCACGATGTGTATCGAGC...CTGTTTGCCCTTTACACTGTCCAAGTAAGTAAATAACTGCCCAATTATAAAGCA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
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| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGCTCGATACACATCGTaGCAGCGAAGGTTCCTTTGG | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECARYTS*QRRFLW Trigger: CCAAAGGAACCTTCGCTGCCACGATGTGTATCGAGC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCATTGGAGAGCAAAGCTaGAAGGGGCAGTTCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSIGEQS*KGQFFG Trigger: CCCAAAGAACTGCCCCTTTCAGCTTTGCTCTCCAAT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | TTTTCTTTAAAGTGGAGTTGTGGAAATTGCAAGGTGACTCACAGCCACAGCGCCGAAGACAAAATAGCTTaGGTCTTTCTCTGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLKWSCGNCKVTHSHSAEDKIA*VFLCVE Trigger: TTCTACACAGAGAAAGACCCAAGCTATTTTGTCTTC...GGCGCTGTGGCTGTGAGTCACCTTGCAATTTCCACAACTCCACTTTAAAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| 3UTR CAA 72 bp | AATGCTATCCTTTTCTTTAAAGTGGAGTTGTGGAAATaGCAAGGTGACTCACAGCCACAGCGCCTACAAATA | + |
|
Preference number: 4 (lower is better) Translates to: NAILFFKVELWK*QGDSQPQRLQI Trigger: TATTTGTAGGCGCTGTGGCTGTGAGTCACCTTGCAATTTCCACAACTCCACTTTAAAGAAAAGGATAGCATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCCCCGCTTTTCAGGCCTaGAATTCATTTTCAGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSPAFQA*NSFSGP Trigger: TGGACCTGAAAATGAATTTCAGGCCTGAAAAGCGGG...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCAGCTTCTTCGTCTTTaGAACGAACCAAGCAGCAAC | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECQLLRL*NEPSSN Trigger: GTTGCTGCTTGGTTCGTTCCAAAGACGAAGAAGCTG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGAAACTGGACACGTTTaGGAACGACGCTTCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECETGHV*ERRFHY Trigger: GTAATGGAAGCGTCGTTCCCAAACGTGTCCAGTTTC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGAAACTGGACACGTTTaGGAACGACGCTTCCATTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSETGHV*ERRFHY Trigger: GTAATGGAAGCGTCGTTCCCAAACGTGTCCAGTTTC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGTAATCGGATCTTCGTaGCCAGTTTCCTCAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSVIGSS*PVSSNS Trigger: ACTGTTTGAGGAAACTGGTCACGAAGATCCGATTAC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTGCTTTTGGCTTCTATaGGTAAAACACGGCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECCFWLL*VKHGWS Trigger: AGACCAGCCGTGTTTTACGCATAGAAGCCAAAAGCA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR GCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCATCCTGGGTTTATTCTaGAGACACTTGGTTAGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSILGLF*RHLVRW Trigger: CCACCTAACCAAGTGTCTGCAGAATAAACCCAGGAT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTTCGTACTCTTCCTGTaGCTGTGTTTCCAGTCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSFVLFL*LCFQSC Trigger: ACAAGACTGGAAACACAGCCACAGGAAGAGTACGAA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTTTTGGGGGTCTTATTaGAGAGCAAAGCTGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSFWGSY*RAKLKG Trigger: CCCTTTCAGCTTTGCTCTCCAATAAGACCCCCAAAA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTATCCAACATGGTATTaGGGACATCCAAGAAAGGTG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSYPTWY*GHPRKV Trigger: CACCTTTCTTGGATGTCCTCAATACCATGTTGGATA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGTTGTGATCTTTTTGTaGGAATCCTCAATCACGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSVVIFL*ESSITW Trigger: CCACGTGATTGAGGATTCTCACAAAAAGATCACAAC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR GCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCAACTCTGTTTCTGCATaGAGTTCCCAAGATGAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSNSVSA*SSQDEE Trigger: TTCCTCATCTTGGGAACTGCATGCAGAAACAGAGTT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCAGGAACAGAACACAGTaGTCCTTAAACATGTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSRNRTQ*SLNMSK Trigger: CTTGGACATGTTTAAGGACCACTGTGTTCTGTTCCT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGGGCTTTTCACTTTCTaGCTTAATAGGCAGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECGLFTF*LNRQKI Trigger: GATCTTCTGCCTATTAAGCCAGAAAGTGAAAAGCCC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCATGCAGTTCCCAAGATaGGGAATACTATGCTTCAAA | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECMQFPR*GILCFK Trigger: TTTGAAGCATAGTATTCCTCATCTTGGGAACTGCAT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | TGCTTTATAATTGGGCAGTTATTTACTTACTTGGACAGTGTAAAGGGCAAACAGAAAGGGGCAGTTCTTTaGGTCAGAATTTGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: CFIIGQLFTYLDSVKGKQKGAVL*VRICIH Trigger: ATGGATACAAATTCTGACCCAAAGAACTGCCCCTTT...CTGTTTGCCCTTTACACTGTCCAAGTAAGTAAATAACTGCCCAATTATAAAGCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAAAGGGGCAGTTCTTTaGGTCAGAATTTGTATCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECKGAVL*VRICIH Trigger: ATGGATACAAATTCTGACCCAAAGAACTGCCCCTTT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTTCCATCCTTGCTTTTaGCTTCTATGCGTAAAACAC | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSFHPCF*LLCVKH Trigger: GTGTTTTACGCATAGAAGCCAAAAGCAAGGATGGAA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTGTGAAAAACTGTCATaGGCACTAACTTTCCATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECCEKLS*ALTFHP Trigger: AGGATGGAAAGTTAGTGCCCATGACAGTTTTTCACA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR TCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCAATCAATGAAAGGCTaGTCCAATTTAAGTTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECQSMKG*SNLSSS Trigger: GGAAGAACTTAAATTGGATCAGCCTTTCATTGATTG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR TCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCATTTCATCTGGGTTGTaGTCTTTTTGTGAGAATCCT | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECISSGL*SFCENP Trigger: AGGATTCTCACAAAAAGATCACAACCCAGATGAAAT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGAAGACAAAATAGCTTaGGTCTTTCTCTGTGTAGAA | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECEDKIA*VFLCVE Trigger: TTCTACACAGAGAAAGACCCAAGCTATTTTGTCTTC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS-3UTR CCA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGTATGTGTAATATTTTaGGGGTCTTATTGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ETKLIIISMCFQFPAECSVCVIF*GSYWRA Trigger: TGCTCTCCAATAAGACCCCCAAAATATTACACATAC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGTATGTGTAATATTTTaGGGGTCTTATTGGAGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECVCVIF*GSYWRA Trigger: TGCTCTCCAATAAGACCCCCAAAATATTACACATAC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTATTCTGCAGACACTTaGTTAGGTGGTACTTTTTCA | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECYSADT*LGGTFS Trigger: TGAAAAAGTACCACCTAACCAAGTGTCTGCAGAATA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR GCA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTTTCCTCAAACAGTTTaGCTTCTGCAAATTTGTATG | + |
|
Preference number: 4 (lower is better) Translates to: LETKLIIISMCFQFPAECFPQTV*LLQICM Trigger: CATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| 3UTR CAA 72 bp | TATAAATGCTTTATAATTGGGCAGTTATTTACTTACTaGGACAGTGTAAAGGGCAAACAGAAGCAAGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: YKCFIIGQLFTY*DSVKGKQKQGI Trigger: AATCCCTTGCTTCTGTTTGCCCTTTACACTGTCCAAGTAAGTAAATAACTGCCCAATTATAAAGCATTTATA 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | AACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATCCTTCACCCGCTCCCTaGGTGTGCTCAGCCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: NCAKSTGDHFRSSSRAENPSPAP*VCSATA Trigger: GGCCGTGGCTGAGCACACCAAGGGAGCGGGTGAAGG...ATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS TCA 90 bp | AACTGGACACGTTTGGGAACGACGCTTCCATTACAGGCTGGTCACTaGGCTTCACAACTACTAAGGTGGAGGTTTCAGAATCCTCCGTCC | + |
|
Preference number: 5 (lower is better) Translates to: NWTRLGTTLPLQAGH*ASQLLRWRFQNPPS Trigger: GGACGGAGGATTCTGAAACCTCCACCTTAGTAGTTGTGAAGCTCAGTGACCAGCCTGTAATGGAAGCGTCGTTCCCAAACGTGTCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CCA 90 bp | CTCAACATAGTAAAGCATTCCGTGTATCCTCTTCTGAATAAGGACTaGTGGGTCCCACGGGCTCAGGCCATCTATCAACCACACCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: LNIVKHSVYPLLNKD*WVPRAQAIYQPHLG Trigger: TCCGAGGTGTGGTTGATAGATGGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAGAAGAGGATACACGGAATGCTTTACTATGTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 90 bp | AAAGCTGAAAGGGGCAGTTCTTTGGGTCAGAATTTGTATCCATTATaGATCCACAGGCCCAAGGCGGGAGCTTTAGGGAGCGCACTGAGT | + |
|
Preference number: 5 (lower is better) Translates to: KAERGSSLGQNLYPL*IHRPKAGALGSALS Trigger: ACTCAGTGCGCTCCCTAAAGCTCCCGCCTTGGGCCTGTGGATTCATAATGGATACAAATTCTGACCCAAAGAACTGCCCCTTTCAGCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 90 bp | GCAGGGACAGTAGCGCTTTATGTAGTTCTTGTGTTTCTCATCAGATaGCGGGTTCCCCCACTCTTCCAACTCTTCCAGTGTCAGAGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: AGTVALYVVLVFLIR*RVPPLFQLFQCQRK Trigger: CTTCCTCTGACACTGGAAGAGTTGGAAGAGTGGGGGAACCCGTCATCTGATGAGAAACACAAGAACTACATAAAGCGCTACTGTCCCTGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 90 bp | AACATAGTAAAGCATTCCGTGTATCCTCTTCTGAATAAGGACTGGTaGGTCCCACGGGCTCAGGCCATCTATCAACCACACCTCGGAAGT | + |
|
Preference number: 5 (lower is better) Translates to: NIVKHSVYPLLNKDW*VPRAQAIYQPHLGS Trigger: ACTTCCGAGGTGTGGTTGATAGATGGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAGAAGAGGATACACGGAATGCTTTACTATGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCCTTCACCCGCTCCCTaGGTGTGCTCAGCCACGGCC | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECPSPAP*VCSATA Trigger: GGCCGTGGCTGAGCACACCAAGGGAGCGGGTGAAGG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 90 bp | TTTCAGCGGCACTCGCTCATCGTTTTCATAGGCTGTGATGTGAACTaGAGGATAATGCTGAGGCTTAATGTTCTGGCAGGGACAGTAGCG | + |
|
Preference number: 5 (lower is better) Translates to: FQRHSLIVFIGCDVN*RIMLRLNVLAGTVA Trigger: CGCTACTGTCCCTGCCAGAACATTAAGCCTCAGCATTATCCTTCAGTTCACATCACAGCCTATGAAAACGATGAGCGAGTGCCGCTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 90 bp | CATTCGAAACTGGACACGTTTGGGAACGACGCTTCCATTACAGGCTaGTCACTGAGCTTCACAACTACTAAGGTGGAGGTTTCAGAATCC | + |
|
Preference number: 5 (lower is better) Translates to: HSKLDTFGNDASITG*SLSFTTTKVEVSES Trigger: GGATTCTGAAACCTCCACCTTAGTAGTTGTGAAGCTCAGTGACCAGCCTGTAATGGAAGCGTCGTTCCCAAACGTGTCCAGTTTCGAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CCA 90 bp | CTTTCTCTGTGTAGAACCGTTCATTGCGCTTGTTGTCACCAAATGTaGCTCGATACACATCGTGGCAGCGAAGGTTCCTTTGGAAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: LSLCRTVHCACCHQM*LDTHRGSEGSFGRC Trigger: ACACCTTCCAAAGGAACCTTCGCTGCCACGATGTGTATCGAGCCACATTTGGTGACAACAAGCGCAATGAACGGTTCTACACAGAGAAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234676.2 |
||
| CDS TCA 90 bp | AAGCTAAGATCCATCCATCATCCACCAAGACCCGCTTTTCAGGCCTaGAATTCATTTTCAGGTCCATTCCGTACGCTCCATAGACGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: KLRSIHHPPRPAFQA*NSFSGPFRTLHRRA Trigger: TGCACGTCTATGGAGCGTACGGAATGGACCTGAAAATGAATTTCAGGCCTGAAAAGCGGGTCTTGGTGGATGATGGATGGATCTTAGCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS GCA 90 bp | GGAAGACAAAATAGCTTGGGTCTTTCTCTGTGTAGAACCGTTCATTaGGCTTGTTGTCACCAAATGTGGCTCGATACACATCGTGGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRQNSLGLSLCRTVH*ACCHQMWLDTHRGS Trigger: GCTGCCACGATGTGTATCGAGCCACATTTGGTGACAACAAGCGCAATGAACGGTTCTACACAGAGAAAGACCCAAGCTATTTTGTCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | TTTTCTTTAAAGTGGAGTTGTGGAAATTGCAAGGTGACTCACAGCCACAGCGCCTCCTCCGTCCTTATCTaGGCAGCCACGTATTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: FSLKWSCGNCKVTHSHSASSVLI*AATYFS Trigger: TGAGAAATACGTGGCTGCCAAGATAAGGACGGAGGA...GGCGCTGTGGCTGTGAGTCACCTTGCAATTTCCACAACTCCACTTTAAAGAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | CTTGAGAGACGACAGTCACTCTGTGGTGTACACAAGAGAGCTGGACGGCATAGAACTAACTTTCCATCCTaGCTTTTGGCTTCTATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LERRQSLCGVHKRAGRHRTNFPS*LLASMR Trigger: ACGCATAGAAGCCAAAAGCAAGGATGGAAAGTTAGT...TCTATGCCGTCCAGCTCTCTTGTGTACACCACAGAGTGACTGTCGTCTCTCAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTCTGGCTCCCTTCTCTACATCCTACTGAGGAGCATGATGGAAAACGACAAGTCAGCAAGGCCATaGAGCTTTTTAGTTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: SPSGSLLYILLRSMMENDKSARP*SFLVSR Trigger: CCGACTAACTAAAAAGCTCAATGGCCTTGCTGACTT...GTCGTTTTCCATCATGCTCCTCAGTAGGATGTAGAGAAGGGAGCCAGAAGGACT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | AATTCTGTTAAAAGACTGATTGGGAGGCCAGGCGTTCTCCTGTTCTCCTGCCCCGCTGTGTTTCCAGTCTaGTTCTCACTTTTTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NSVKRLIGRPGVLLFSCPAVFPV*FSLFQM Trigger: CATTTGAAAAAGTGAGAACAAGACTGGAAACACAGC...GGGGCAGGAGAACAGGAGAACGCCTGGCCTCCCAATCAGTCTTTTAACAGAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | AGTCCTTCTGGCTCCCTTCTCTACATCCTACTGAGGAGCATGATGGAAAACGACACCTCGGAAGTCGTCTaGTTCATAATATTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: SPSGSLLYILLRSMMENDTSEVV*FIIFSV Trigger: CACACTGAATATTATGAACAAGACGACTTCCGAGGT...GTCGTTTTCCATCATGCTCCTCAGTAGGATGTAGAGAAGGGAGCCAGAAGGACT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | TACATCCTACTGAGGAGCATGATGGAAAACGACTTTCCTAGGCCAGGGGGTGTGTGTATGTGTAATATTTaGGGGGTCTTATTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YILLRSMMENDFPRPGGVCMCNI*GVLLES Trigger: GCTCTCCAATAAGACCCCCAAAATATTACACATACA...CACACCCCCTGGCCTAGGAAAGTCGTTTTCCATCATGCTCCTCAGTAGGATGTA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS GCA 90 bp | TACTGTAATAAGGACCAGCGACGTTACGGTAACTCTGTTTCTGCATaGAGTTCCCAAGATGAGGAATACTATGCTTCAAAGCTCGGAGAG | + |
|
Preference number: 5 (lower is better) Translates to: YCNKDQRRYGNSVSA*SSQDEEYYASKLGE Trigger: CTCTCCGAGCTTTGAAGCATAGTATTCCTCATCTTGGGAACTGCATGCAGAAACAGAGTTACCGTAACGTCGCTGGTCCTTATTACAGTA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS CCA 90 bp | GCCGCCATGTTTAATCTCTGCATTGACGACTTCGTACTCTTCCTGTaGCTGTGTTTCCAGTCTTGTTCTCACTTTTTCAAATGCATCCAT | + |
|
Preference number: 5 (lower is better) Translates to: AAMFNLCIDDFVLFL*LCFQSCSHFFKCIH Trigger: ATGGATGCATTTGAAAAAGTGAGAACAAGACTGGAAACACAGCCACAGGAAGAGTACGAAGTCGTCAATGCAGAGATTAAACATGGCGGC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CCA 90 bp | GAGGAAACGACTGTCTTTTGTAAGGTAGAGGAAGACAAAATAGCTTaGGTCTTTCTCTGTGTAGAACCGTTCATTGCGCTTGTTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: EETTVFCKVEEDKIA*VFLCVEPFIALVVT Trigger: GGTGACAACAAGCGCAATGAACGGTTCTACACAGAGAAAGACCCAAGCTATTTTGTCTTCCTCTACCTTACAAAAGACAGTCGTTTCCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CACAGGGCTGAGCAGACTCATGAATGGCATCAATTCTTAGATATTTCTGTAGCATCAGCTTCTTCGTCTTaGGAACGAACCAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: HRAEQTHEWHQFLDISVASASSS*ERTKQQ Trigger: TTGCTGCTTGGTTCGTTCCAAAGACGAAGAAGCTGA...TGCTACAGAAATATCTAAGAATTGATGCCATTCATGAGTCTGCTCAGCCCTGTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS TCA 90 bp | GCTTCTATGCGTAAAACACGGCTGGTCTTTGTAATCGGATCTTCGTaGCCAGTTTCCTCAAACAGTTTGCCTTCTGCAAATTTGTATGTG | + |
|
Preference number: 5 (lower is better) Translates to: ASMRKTRLVFVIGSS*PVSSNSLPSANLYV Trigger: CACATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAACTGGTCACGAAGATCCGATTACAAAGACCAGCCGTGTTTTACGCATAGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS GCA 90 bp | CGACTTGGGATGTTTCTTGCTAATCCTGCTATCCTGGGTTTATTCTaGAGACACTTGGTTAGGTGGTACTTTTTCAATCTTACTCTACTG | + |
|
Preference number: 5 (lower is better) Translates to: RLGMFLANPAILGLF*RHLVRWYFFNLTLL Trigger: CAGTAGAGTAAGATTGAAAAAGTACCACCTAACCAAGTGTCTGCAGAATAAACCCAGGATAGCAGGATTAGCAAGAAACATCCCAAGTCG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCCGAAACTGGACACGTTaGGGAACGACGCTTCCATTA | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECRNWTR*GTTLPL Trigger: TAATGGAAGCGTCGTTCCCAAACGTGTCCAGTTTCG...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTCAGCTTCTTCGTCTTaGGAACGAACCAAGCAGCAA | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSSASSS*ERTKQQ Trigger: TTGCTGCTTGGTTCGTTCCAAAGACGAAGAAGCTGA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | ATCATCAACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTTCCAAGTCTACAACCTaGGTATTTCTCTTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: IINCAKSTGDHFRSSSRASKSTT*VFLFIV Trigger: CACAATGAAGAGAAATACCAAGGTTGTAGACTTGGA...AGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTTGATGAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGACTTGGGATGTTTCTaGCTAATCCTGCTATCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSDLGCF*LILLSW Trigger: CCAGGATAGCAGGATTAGCAAGAAACATCCCAAGTC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCACGAGAAGCTCCGACTaGGGATGTTTCTTGCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSTRSSD*GCFLLI Trigger: GATTAGCAAGAAACATCCCAAGTCGGAGCTTCTCGT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCATTTTGGGGGTCTTATaGGAGAGCAAAGCTGAAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECILGVL*ESKAER Trigger: CCTTTCAGCTTTGCTCTCCAATAAGACCCCCAAAAT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | AACTGTGCTAAATCTACAGGGGATCATTTCAGATCTTCCTCCAGAGCTGAGAATGTTTCCTCAAACAGTTaGCCTTCTGCAAATTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: NCAKSTGDHFRSSSRAENVSSNS*PSANLY Trigger: ATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAAC...ATTCTCAGCTCTGGAGGAAGATCTGAAATGATCCCCTGTAGATTTAGCACAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000072406.5 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCAAGTCAGCAAGGCCATaGAGCTTTTTAGTTAGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSKSARP*SFLVSR Trigger: CCGACTAACTAAAAAGCTCAATGGCCTTGCTGACTT...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCACCTCGGAAGTCGTCTaGTTCATAATATTCAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECTSEVV*FIIFSV Trigger: CACACTGAATATTATGAACAAGACGACTTCCGAGGT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCACTAACTTTCCATCCTaGCTTTTGGCTTCTATGCGT | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECTNFPS*LLASMR Trigger: ACGCATAGAAGCCAAAAGCAAGGATGGAAAGTTAGT...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCGCTGTGTTTCCAGTCTaGTTCTCACTTTTTCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECAVFPV*FSLFQM Trigger: CATTTGAAAAAGTGAGAACAAGACTGGAAACACAGC...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTCCAAGTCTACAACCTaGGTATTTCTCTTCATTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSSKSTT*VFLFIV Trigger: CACAATGAAGAGAAATACCAAGGTTGTAGACTTGGA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTGTATGTGTAATATTTaGGGGGTCTTATTGGAGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECCMCNI*GVLLES Trigger: GCTCTCCAATAAGACCCCCAAAATATTACACATACA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCTTTCCATCCTTGCTTTaGGCTTCTATGCGTAAAACA | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSFPSLL*ASMRKT Trigger: TGTTTTACGCATAGAAGCCAAAAGCAAGGATGGAAA...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | CTGGAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCTTATTCTGCAGACACTaGGTTAGGTGGTACTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: LETKLIIISMCFQFPAECLFCRH*VRWYFF Trigger: GAAAAAGTACCACCTAACCAAGTGTCTGCAGAATAA...GCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTCCAG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
||
| CDS-3UTR CAA 90 bp | GAAACAAAACTAATTATTATTTCCATGTGTTTCCAGTTCCCAGCTGAATGCAGCGTTTCCTCAAACAGTTaGCCTTCTGCAAATTTGTAT | + |
|
Preference number: 5 (lower is better) Translates to: ETKLIIISMCFQFPAECSVSSNS*PSANLY Trigger: ATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAAC...GCTGCATTCAGCTGGGAACTGGAAACACATGGAAATAATAATTAGTTTTGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS GCA 72 bp | AGGCCATTGAGCTTTTTAGTTAGTCGGCCATCGGCATaGCACTGGAGACCTAGCTCGCCACCACCCCTAACA | + |
|
Preference number: 6 (lower is better) Translates to: RPLSFLVSRPSA*HWRPSSPPPLT Trigger: TGTTAGGGGTGGTGGCGAGCTAGGTCTCCAGTGGCATGCCGATGGCCGACTAACTAAAAAGCTCAATGGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | AATTACACAGTGCTCCCACGAGCACACCTCCAGCACTaGAAGCGCTCAGCGTTGTTAGGCTCGGCTGAGAAA | + |
|
Preference number: 6 (lower is better) Translates to: NYTVLPRAHLQH*KRSALLGSAEK Trigger: TTTCTCAGCCGAGCCTAACAACGCTGAGCGCTTTCAGTGCTGGAGGTGTGCTCGTGGGAGCACTGTGTAATT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | CCAGTGTCAGAGGAAGGGTGGTATCCAACATGGTATTaGGGACATCCAAGAAAGGTGCCTCCAGGGTCACGG | + |
|
Preference number: 6 (lower is better) Translates to: PVSEEGWYPTWY*GHPRKVPPGSR Trigger: CCGTGACCCTGGAGGCACCTTTCTTGGATGTCCTCAATACCATGTTGGATACCACCCTTCCTCTGACACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 72 bp | TTGAGCTTTTTAGTTAGTCGGCCATCGGCATGCCACTaGAGACCTAGCTCGCCACCACCCCTAACATGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: LSFLVSRPSACH*RPSSPPPLTWQ Trigger: TTGCCATGTTAGGGGTGGTGGCGAGCTAGGTCTCCAGTGGCATGCCGATGGCCGACTAACTAAAAAGCTCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 72 bp | AAGCATTCCGTGTATCCTCTTCTGAATAAGGACTGGTaGGTCCCACGGGCTCAGGCCATCTATCAACCACAC | + |
|
Preference number: 6 (lower is better) Translates to: KHSVYPLLNKDW*VPRAQAIYQPH Trigger: GTGTGGTTGATAGATGGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAGAAGAGGATACACGGAATGCTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | AGGGGCAGTTCTTTGGGTCAGAATTTGTATCCATTATaGATCCACAGGCCCAAGGCGGGAGCTTTAGGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RGSSLGQNLYPL*IHRPKAGALGS Trigger: GCTCCCTAAAGCTCCCGCCTTGGGCCTGTGGATTCATAATGGATACAAATTCTGACCCAAAGAACTGCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 72 bp | CTGGACACGTTTGGGAACGACGCTTCCATTACAGGCTaGTCACTGAGCTTCACAACTACTAAGGTGGAGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LDTFGNDASITG*SLSFTTTKVEV Trigger: AACCTCCACCTTAGTAGTTGTGAAGCTCAGTGACCAGCCTGTAATGGAAGCGTCGTTCCCAAACGTGTCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CCA 72 bp | GTAAAGCATTCCGTGTATCCTCTTCTGAATAAGGACTaGTGGGTCCCACGGGCTCAGGCCATCTATCAACCA | + |
|
Preference number: 6 (lower is better) Translates to: VKHSVYPLLNKD*WVPRAQAIYQP Trigger: TGGTTGATAGATGGCCTGAGCCCGTGGGACCCACCAGTCCTTATTCAGAAGAGGATACACGGAATGCTTTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 72 bp | TTCTTCATCCTTCACCCATTCGAAACTGGACACGTTTaGGAACGACGCTTCCATTACAGGCTGGTCACTGAG | + |
|
Preference number: 6 (lower is better) Translates to: FFILHPFETGHV*ERRFHYRLVTE Trigger: CTCAGTGACCAGCCTGTAATGGAAGCGTCGTTCCCAAACGTGTCCAGTTTCGAATGGGTGAAGGATGAAGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CAA 72 bp | ATAATAGCAGGGGCATCAGCTGCCGTCCGCATCAGCTaGAATTCTGTAGGTTCTCCAACATTCGTCAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: IIAGASAAVRIS*NSVGSPTFVRM Trigger: CATCCTGACGAATGTTGGAGAACCTACAGAATTCAAGCTGATGCGGACGGCAGCTGATGCCCCTGCTATTAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CAA 72 bp | AGCGTCTTAATGCAAGCCACTAAGTCAGCAAGGCCATaGAGCTTTTTAGTTAGTCGGCCATCGGCATGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVLMQATKSARP*SFLVSRPSACH Trigger: GTGGCATGCCGATGGCCGACTAACTAAAAAGCTCAATGGCCTTGCTGACTTAGTGGCTTGCATTAAGACGCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | CGTTTGGGAACGACGCTTCCATTACAGGCTGGTCACTaGGCTTCACAACTACTAAGGTGGAGGTTTCAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: RLGTTLPLQAGH*ASQLLRWRFQN Trigger: ATTCTGAAACCTCCACCTTAGTAGTTGTGAAGCTCAGTGACCAGCCTGTAATGGAAGCGTCGTTCCCAAACG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS TCA 72 bp | TCCATCCATCATCCACCAAGACCCGCTTTTCAGGCCTaGAATTCATTTTCAGGTCCATTCCGTACGCTCCAT | + |
|
Preference number: 6 (lower is better) Translates to: SIHHPPRPAFQA*NSFSGPFRTLH Trigger: ATGGAGCGTACGGAATGGACCTGAAAATGAATTTCAGGCCTGAAAAGCGGGTCTTGGTGGATGATGGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS CCA 72 bp | TGTAGAACCGTTCATTGCGCTTGTTGTCACCAAATGTaGCTCGATACACATCGTGGCAGCGAAGGTTCCTTT | + |
|
Preference number: 6 (lower is better) Translates to: CRTVHCACCHQM*LDTHRGSEGSF Trigger: AAAGGAACCTTCGCTGCCACGATGTGTATCGAGCCACATTTGGTGACAACAAGCGCAATGAACGGTTCTACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234676.2 |
||
| CDS CAA 72 bp | ACTAAGGTGGAGGTTTCAGAATCCTCCGTCCTTATCTaGGCAGCCACGTATTTCTCATCAGGAGCAACTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TKVEVSESSVLI*AATYFSSGATL Trigger: CAGAGTTGCTCCTGATGAGAAATACGTGGCTGCCAAGATAAGGACGGAGGATTCTGAAACCTCCACCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
||
| CDS CAA 90 bp | TCCCACGGGCTCAGGCCATCTATCAACCACACCTCGGAAGTCGTCTaGTTCATAATATTCAGTGTGAGGAAACGACTGTCTTTTGTAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHGLRPSINHTSEVV*FIIFSVRKRLSFVR Trigger: CCTTACAAAAGACAGTCGTTTCCTCACACTGAATATTATGAACAAGACGACTTCCGAGGTGTGGTTGATAGATGGCCTGAGCCCGTGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | AGAGGCTTCCTCTGCAGGTCCTCAGAATCGGTTTTGTaGAAAACTGTCATGGGCACTAACTTTCCATCCTTG | + |
|
Preference number: 6 (lower is better) Translates to: RGFLCRSSESVL*KTVMGTNFPSL Trigger: CAAGGATGGAAAGTTAGTGCCCATGACAGTTTTTCACAAAACCGATTCTGAGGACCTGCAGAGGAAGCCTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
||
| CDS TCA 72 bp | GTAGCGCTTTATGTAGTTCTTGTGTTTCTCATCAGATaGCGGGTTCCCCCACTCTTCCAACTCTTCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: VALYVVLVFLIR*RVPPLFQLFQC Trigger: ACACTGGAAGAGTTGGAAGAGTGGGGGAACCCGTCATCTGATGAGAAACACAAGAACTACATAAAGCGCTAC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS TCA 72 bp | CACTCGCTCATCGTTTTCATAGGCTGTGATGTGAACTaGAGGATAATGCTGAGGCTTAATGTTCTGGCAGGG | + |
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Preference number: 6 (lower is better) Translates to: HSLIVFIGCDVN*RIMLRLNVLAG Trigger: CCCTGCCAGAACATTAAGCCTCAGCATTATCCTTCAGTTCACATCACAGCCTATGAAAACGATGAGCGAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CAA 72 bp | GATCCTTACACGAGAAGCTCCGACTTGGGATGTTTCTaGCTAATCCTGCTATCCTGGGTTTATTCTGCAGAC | + |
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Preference number: 6 (lower is better) Translates to: DPYTRSSDLGCF*LILLSWVYSAD Trigger: GTCTGCAGAATAAACCCAGGATAGCAGGATTAGCAAGAAACATCCCAAGTCGGAGCTTCTCGTGTAAGGATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
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| CDS CAA 90 bp | TTCACAACTACTAAGGTGGAGGTTTCAGAATCCTCCGTCCTTATCTaGGCAGCCACGTATTTCTCATCAGGAGCAACTCTGATGCAATCA | + |
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Preference number: 6 (lower is better) Translates to: FTTTKVEVSESSVLI*AATYFSSGATLMQS Trigger: TGATTGCATCAGAGTTGCTCCTGATGAGAAATACGTGGCTGCCAAGATAAGGACGGAGGATTCTGAAACCTCCACCTTAGTAGTTGTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
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| CDS GCA 72 bp | AAGGACCAGCGACGTTACGGTAACTCTGTTTCTGCATaGAGTTCCCAAGATGAGGAATACTATGCTTCAAAG | + |
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Preference number: 6 (lower is better) Translates to: KDQRRYGNSVSA*SSQDEEYYASK Trigger: CTTTGAAGCATAGTATTCCTCATCTTGGGAACTGCATGCAGAAACAGAGTTACCGTAACGTCGCTGGTCCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
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| CDS CAA 72 bp | CTCAGGCCATCTATCAACCACACCTCGGAAGTCGTCTaGTTCATAATATTCAGTGTGAGGAAACGACTGTCT | + |
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Preference number: 6 (lower is better) Translates to: LRPSINHTSEVV*FIIFSVRKRLS Trigger: AGACAGTCGTTTCCTCACACTGAATATTATGAACAAGACGACTTCCGAGGTGTGGTTGATAGATGGCCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS TCA 72 bp | CGTAAAACACGGCTGGTCTTTGTAATCGGATCTTCGTaGCCAGTTTCCTCAAACAGTTTGCCTTCTGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: RKTRLVFVIGSS*PVSSNSLPSAN Trigger: ATTTGCAGAAGGCAAACTGTTTGAGGAAACTGGTCACGAAGATCCGATTACAAAGACCAGCCGTGTTTTACG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS GCA 72 bp | AATAGCTTGGGTCTTTCTCTGTGTAGAACCGTTCATTaGGCTTGTTGTCACCAAATGTGGCTCGATACACAT | + |
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Preference number: 6 (lower is better) Translates to: NSLGLSLCRTVH*ACCHQMWLDTH Trigger: ATGTGTATCGAGCCACATTTGGTGACAACAAGCGCAATGAACGGTTCTACACAGAGAAAGACCCAAGCTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CCA 72 bp | TCTTATTGGAGAGCAAAGCTGAAAGGGGCAGTTCTTTaGGTCAGAATTTGTATCCATTATGAATCCACAGGC | + |
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Preference number: 6 (lower is better) Translates to: SYWRAKLKGAVL*VRICIHYESTG Trigger: GCCTGTGGATTCATAATGGATACAAATTCTGACCCAAAGAACTGCCCCTTTCAGCTTTGCTCTCCAATAAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CAA 72 bp | AAAACTGTCATGGGCACTAACTTTCCATCCTTGCTTTaGGCTTCTATGCGTAAAACACGGCTGGTCTTTGTA | + |
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Preference number: 6 (lower is better) Translates to: KTVMGTNFPSLL*ASMRKTRLVFV Trigger: TACAAAGACCAGCCGTGTTTTACGCATAGAAGCCAAAAGCAAGGATGGAAAGTTAGTGCCCATGACAGTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CAA 72 bp | CGACTTCGTACTCTTCCTGTGGCTGTGTTTCCAGTCTaGTTCTCACTTTTTCAAATGCATCCATGTTTTCAG | + |
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Preference number: 6 (lower is better) Translates to: RLRTLPVAVFPV*FSLFQMHPCFQ Trigger: CTGAAAACATGGATGCATTTGAAAAAGTGAGAACAAGACTGGAAACACAGCCACAGGAAGAGTACGAAGTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
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| CDS GCA 72 bp | ACTTTAGGTATTTCTTCAGCGCCTCGAAAGCATCAGTaGTGTCAAGTCCAAGTTCCTCATATAGGAATTTCA | + |
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Preference number: 6 (lower is better) Translates to: TLGISSAPRKHQ*CQVQVPHIGIS Trigger: TGAAATTCCTATATGAGGAACTTGGACTTGACAGCACTGATGCTTTCGAGGCGCTGAAGAAATACCTAAAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CCA 72 bp | TGCATCCATGTTTTCAGAAATGGGCTTTTCACTTTCTaGCTTAATAGGCAGAAGATCCTTACACGAGAAGCT | + |
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Preference number: 6 (lower is better) Translates to: CIHVFRNGLFTF*LNRQKILTREA Trigger: AGCTTCTCGTGTAAGGATCTTCTGCCTATTAAGCCAGAAAGTGAAAAGCCCATTTCTGAAAACATGGATGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
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| CDS CAA 72 bp | ACAGTTTGCCTTCTGCAAATTTGTATGTGTAATATTTaGGGGGTCTTATTGGAGAGCAAAGCTGAAAGGGGC | + |
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Preference number: 6 (lower is better) Translates to: TVCLLQICMCNI*GVLLESKAERG Trigger: GCCCCTTTCAGCTTTGCTCTCCAATAAGACCCCCAAAATATTACACATACAAATTTGCAGAAGGCAAACTGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CAA 90 bp | TTTCCTCAAACAGTTTGCCTTCTGCAAATTTGTATGTGTAATATTTaGGGGGTCTTATTGGAGAGCAAAGCTGAAAGGGGCAGTTCTTTG | + |
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Preference number: 6 (lower is better) Translates to: FPQTVCLLQICMCNI*GVLLESKAERGSSL Trigger: CAAAGAACTGCCCCTTTCAGCTTTGCTCTCCAATAAGACCCCCAAAATATTACACATACAAATTTGCAGAAGGCAAACTGTTTGAGGAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 |
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| CDS CCA 72 bp | TTTAATCTCTGCATTGACGACTTCGTACTCTTCCTGTaGCTGTGTTTCCAGTCTTGTTCTCACTTTTTCAAA | + |
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Preference number: 6 (lower is better) Translates to: FNLCIDDFVLFL*LCFQSCSHFFK Trigger: TTTGAAAAAGTGAGAACAAGACTGGAAACACAGCCACAGGAAGAGTACGAAGTCGTCAATGCAGAGATTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
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| CDS GCA 72 bp | ATGTTTCTTGCTAATCCTGCTATCCTGGGTTTATTCTaGAGACACTTGGTTAGGTGGTACTTTTTCAATCTT | + |
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Preference number: 6 (lower is better) Translates to: MFLANPAILGLF*RHLVRWYFFNL Trigger: AAGATTGAAAAAGTACCACCTAACCAAGTGTCTGCAGAATAAACCCAGGATAGCAGGATTAGCAAGAAACAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000171795.9 |
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| CDS CCA 72 bp | AAACTTCATAATTATCACTGTCAGCTTCTTCGTCTTTaGAACGAACCAAGCAGCAACCTTCTTGATAATAAA | + |
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Preference number: 6 (lower is better) Translates to: KLHNYHCQLLRL*NEPSSNLLDNK Trigger: TTTATTATCAAGAAGGTTGCTGCTTGGTTCGTTCCAAAGACGAAGAAGCTGACAGTGATAATTATGAAGTTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000072406.5 ENSMUST00000171795.9 ENSMUST00000234393.2 ENSMUST00000234676.2 |
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