RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PREP (Mus musculus)

Ensembl gene IDs: ENSMUSG00000019849

Ensembl transcript IDs: ENSMUST00000099858.4

Found 378 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTGGGCCCTGGGCTTTGGACACAGGTCTCGCACTGCAGCAGACCCTaGGAGTTACACTCCCACTTTTGCTGTGCAGGAGACCTTAGTGGG +
Preference number: 1 (lower is better)
Translates to: VGPGLWTQVSHCSRP*ELHSHFCCAGDLSG
Trigger: CCCACTAAGGTCTCCTGCACAGCAAAAGTGGGAGTGTAACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp TCATGGCCTCCAGTGGGCCCTGGGCTTTGGACACAGGTCTCGCACTaGAGCAGACCCTGCGAGTTACACTCCCACTTTTGCTGTGCAGGA +
Preference number: 1 (lower is better)
Translates to: SWPPVGPGLWTQVSH*SRPCELHSHFCCAG
Trigger: TCCTGCACAGCAAAAGTGGGAGTGTAACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp ATACTGCCCTGTCTCTCATCATGGCCTCCAGTGGGCCCTGGGCTTTaGACACAGGTCTCGCACTGCAGCAGACCCTGCGAGTTACACTCC +
Preference number: 1 (lower is better)
Translates to: ILPCLSSWPPVGPGL*TQVSHCSRPCELHS
Trigger: GGAGTGTAACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp CCGATATACCAGGGAGACAACACAAAGGACCCGAGGCCAGGGCTTTaGCTGCTGCTTCTGTCTTCACCAGAATCTCCCCCGGGGGATCGG +
Preference number: 1 (lower is better)
Translates to: PIYQGDNTKDPRPGL*LLLLSSPESPPGDR
Trigger: CCGATCCCCCGGGGGAGATTCTGGTGAAGACAGAAGCAGCAGCCAAAGCCCTGGCCTCGGGTCCTTTGTGTTGTCTCCCTGGTATATCGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp CATACACATACTGCCCTGTCTCTCATCATGGCCTCCAGTGGGCCCTaGGCTTTGGACACAGGTCTCGCACTGCAGCAGACCCTGCGAGTT +
Preference number: 1 (lower is better)
Translates to: HTHTALSLIMASSGP*ALDTGLALQQTLRV
Trigger: AACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTATGTGTATG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp GGGAACTCATACACATACTGCCCTGTCTCTCATCATGGCCTCCAGTaGGCCCTGGGCTTTGGACACAGGTCTCGCACTGCAGCAGACCCT +
Preference number: 1 (lower is better)
Translates to: GNSYTYCPVSHHGLQ*ALGFGHRSRTAADP
Trigger: AGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTATGTGTATGAGTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp GACGTGTGCTGGGAACTCATACACATACTGCCCTGTCTCTCATCATaGCCTCCAGTGGGCCCTGGGCTTTGGACACAGGTCTCGCACTGC +
Preference number: 1 (lower is better)
Translates to: DVCWELIHILPCLSS*PPVGPGLWTQVSHC
Trigger: GCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTATGTGTATGAGTTCCCAGCACACGTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp GCTGGAGATGCCCTGGTGGGAACTGCTCAGATATCTCCCTTCAAATaGCTTAGGCAGGCCAGCAGAGGCTGCCTCTGGCTTCGATGCGCA +
Preference number: 1 (lower is better)
Translates to: AGDALVGTAQISPFK*LRQASRGCLWLRCA
Trigger: TGCGCATCGAAGCCAGAGGCAGCCTCTGCTGGCCTGCCTAAGTCATTTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGCATCTCCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp ACTCTGCCTTGCTCCCCACACTTCCTTGGGGGCTTGGCTGTTTCCTaGCTCCAGCTCTGCATTCACACCAATGCTGTTTGTCCCAGGGCT +
Preference number: 1 (lower is better)
Translates to: TLPCSPHFLGGLAVS*LQLCIHTNAVCPRA
Trigger: AGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCCAAGCCCCCAAGGAAGTGTGGGGAGCAAGGCAGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CCCCCACTGCAGGGGATCACAGGCACAAGTAGCCTGTGCCCAGCATaGTATACACGTGCTGTTATTCAAACTCGGCAGTCCTCAGGTGTG +
Preference number: 1 (lower is better)
Translates to: PPLQGITGTSSLCPA*YTRAVIQTRQSSGV
Trigger: CACACCTGAGGACTGCCGAGTTTGAATAACAGCACGTGTATAGCATGCTGGGCACAGGCTACTTGTGCCTGTGATCCCCTGCAGTGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CGTGTGCCGGTTTGCCCATTTGTGCACGTGTACATGGAGACAGGATaGCCCATGCCTTTCTCTGTCCCCACCCACCTTACTGCCTTGAGA +
Preference number: 1 (lower is better)
Translates to: RVPVCPFVHVYMETG*PMPFSVPTHLTALR
Trigger: TCTCAAGGCAGTAAGGTGGGTGGGGACAGAGAAAGGCATGGGGCATCCTGTCTCCATGTACACGTGCACAAATGGGCAAACCGGCACACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TGTGAGCGGAGGCACAGTGCTCACGTAGGGCAGCACTCTGCCCAGTaGTTTCTTGGTCAGGATGGTGTGAAAGCCCTTGAGGTTTTCTGT +
Preference number: 1 (lower is better)
Translates to: CERRHSAHVGQHSAQ*FLGQDGVKALEVFC
Trigger: ACAGAAAACCTCAAGGGCTTTCACACCATCCTGACCAAGAAACCACTGGGCAGAGTGCTGCCCTACGTGAGCACTGTGCCTCCGCTCACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp ATGCAAGCATGCGTGTGCCGGTTTGCCCATTTGTGCACGTGTACATaGAGACAGGATGCCCCATGCCTTTCTCTGTCCCCACCCACCTTA +
Preference number: 1 (lower is better)
Translates to: MQACVCRFAHLCTCT*RQDAPCLSLSPPTL
Trigger: TAAGGTGGGTGGGGACAGAGAAAGGCATGGGGCATCCTGTCTCCATGTACACGTGCACAAATGGGCAAACCGGCACACGCATGCTTGCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CTTGTCCTTGCAGCCATGCTGTCAACAGGCTGTGATGAAGGTTGCTaGTTTCAGCCTCAGTGTGACCTGCAGGCTGGTGGCATGTTAGAG +
Preference number: 1 (lower is better)
Translates to: LVLAAMLSTGCDEGC*FQPQCDLQAGGMLE
Trigger: CTCTAACATGCCACCAGCCTGCAGGTCACACTGAGGCTGAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CTCCTTGTCCTTGCAGCCATGCTGTCAACAGGCTGTGATGAAGGTTaGTGCTTTCAGCCTCAGTGTGACCTGCAGGCTGGTGGCATGTTA +
Preference number: 1 (lower is better)
Translates to: LLVLAAMLSTGCDEG*CFQPQCDLQAGGML
Trigger: TAACATGCCACCAGCCTGCAGGTCACACTGAGGCTGAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp GCCTCTGGCTTCGATGCGCAAACACACTCCTTGTCCTTGCAGCCATaGTGTCAACAGGCTGTGATGAAGGTTGCTGCTTTCAGCCTCAGT +
Preference number: 1 (lower is better)
Translates to: ASGFDAQTHSLSLQP*CQQAVMKVAAFSLS
Trigger: ACTGAGGCTGAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp TCCCCACACTTCCTTGGGGGCTTGGCTGTTTCCTGCCTCCAGCTCTaGATTCACACCAATGCTGTTTGTCCCAGGGCTTTGCTGAAATGT +
Preference number: 1 (lower is better)
Translates to: SPHFLGGLAVSCLQL*IHTNAVCPRALLKC
Trigger: ACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCCAAGCCCCCAAGGAAGTGTGGGGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TTAGCCCCGAGCTCCCTTCGTGGCGTTAGGATTACCTGCTCTAAGTaGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGTCACTTCTCAGT +
Preference number: 1 (lower is better)
Translates to: LAPSSLRGVRITCSK*PSCFTLAPLGSLLS
Trigger: ACTGAGAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAACGCCACGAAGGGAGCTCGGGGCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp GGAGACAGGATGCCCCATGCCTTTCTCTGTCCCCACCCACCTTACTaGCTTGAGACACTGTCTCTCAATGAACCAGAAGCTCACCATTTC +
Preference number: 1 (lower is better)
Translates to: GDRMPHAFLCPHPPY*LETLSLNEPEAHHF
Trigger: GAAATGGTGAGCTTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAGAAAGGCATGGGGCATCCTGTCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CACTTTTGCTGTGCAGGAGACCTTAGTGGGAAGGTGATCAGATTCTaGGTGAGCTGGAGATGCCCTGGTGGGAACTGCTCAGATATCTCC +
Preference number: 1 (lower is better)
Translates to: HFCCAGDLSGKVIRF*VSWRCPGGNCSDIS
Trigger: GGAGATATCTGAGCAGTTCCCACCAGGGCATCTCCAGCTCACGCAGAATCTGATCACCTTCCCACTAAGGTCTCCTGCACAGCAAAAGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp TTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGGGAAATaGTGCTGGCCCCAGGTTATAATGGGAGATTGGGTAAACGCCTCT +
Preference number: 1 (lower is better)
Translates to: LHSWERNLGGTKLGK*CWPQVIMGDWVNAS
Trigger: AGAGGCGTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp ACCATTAGTCTTAGTTCGCCTCGGATGGATCATGGAATCTCCCACTaGTATGAGGAAGAGCTGTGGCAGAACTGGCTTTGGGGAGCCATG +
Preference number: 1 (lower is better)
Translates to: TISLSSPRMDHGISH*YEEELWQNWLWGAM
Trigger: CATGGCTCCCCAAAGCCAGTTCTGCCACAGCTCTTCCTCATAGCAGTGGGAGATTCCATGATCCATCCGAGGCGAACTAAGACTAATGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGGGAAATGCTGCTaGCCCCAGGTTATAATGGGAGATTGGGTAAACGCCTCTATTTGG +
Preference number: 1 (lower is better)
Translates to: SWERNLGGTKLGKCC*PQVIMGDWVNASIW
Trigger: CCAAATAGAGGCGTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TGTGCAGGAGACCTTAGTGGGAAGGTGATCAGATTCTGCGTGAGCTaGAGATGCCCTGGTGGGAACTGCTCAGATATCTCCCTTCAAATG +
Preference number: 1 (lower is better)
Translates to: CAGDLSGKVIRFCVS*RCPGGNCSDISLQM
Trigger: CATTTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGCATCTCCAGCTCACGCAGAATCTGATCACCTTCCCACTAAGGTCTCCTGCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGGGAAATGCTaGTGGCCCCAGGTTATAATGGGAGATTGGGTAAACGCCTCTATT +
Preference number: 1 (lower is better)
Translates to: HSWERNLGGTKLGKC*WPQVIMGDWVNASI
Trigger: AATAGAGGCGTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp TGGGGGCTTGGCTGTTTCCTGCCTCCAGCTCTGCATTCACACCAATaGTGTTTGTCCCAGGGCTTTGCTGAAATGTGGTCTCTTTACATT +
Preference number: 1 (lower is better)
Translates to: WGLGCFLPPALHSHQ*CLSQGFAEMWSLYI
Trigger: AATGTAAAGAGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCCAAGCCCCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp ACCTTCAACCATTCCGGCTGTTGTAATGAAACACCACACACTGGGTaGCTCCAACTTAGAAATGACAGCTCTGGTTTGCCCAGACCGGGT +
Preference number: 1 (lower is better)
Translates to: TFNHSGCCNETPHTG*LQLRNDSSGLPRPG
Trigger: ACCCGGTCTGGGCAAACCAGAGCTGTCATTTCTAAGTTGGAGCCACCCAGTGTGTGGTGTTTCATTACAACAGCCGGAATGGTTGAAGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp CAGAACTGGCTTTGGGGAGCCATGTGTCCTCTATTCTGTACTCCCTaGAGAAGGAGTTCGCAAGGCTCTTTGGACAATGCCACTTCCTAT +
Preference number: 1 (lower is better)
Translates to: QNWLWGAMCPLFCTP*RRSSQGSLDNATSY
Trigger: ATAGGAAGTGGCATTGTCCAAAGAGCCTTGCGAACTCCTTCTCCAGGGAGTACAGAATAGAGGACACATGGCTCCCCAAAGCCAGTTCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CATGCTATACACGTGCTGTTATTCAAACTCGGCAGTCCTCAGGTGTaGAGAGCAAGTTCTCTTGTCCACGAGGCATCCAAACCAGAATCC +
Preference number: 1 (lower is better)
Translates to: HAIHVLLFKLGSPQV*RASSLVHEASKPES
Trigger: GGATTCTGGTTTGGATGCCTCGTGGACAAGAGAACTTGCTCTGCACACCTGAGGACTGCCGAGTTTGAATAACAGCACGTGTATAGCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp GGCTGGGGTAGAGCACATGGGAACATGATTTCTGTACAGTGTGATTaGATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGGGAAAT +
Preference number: 1 (lower is better)
Translates to: GWGRAHGNMISVQCD*IPGNVTWEGQSLGN
Trigger: ATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGAAATCATGTTCCCATGTGCTCTACCCCAGCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TATACAGATAAGCAGCTTAGGCTGGGACAGAGAAGTGACGTGTGCTaGGAACTCATACACATACTGCCCTGTCTCTCATCATGGCCTCCA +
Preference number: 1 (lower is better)
Translates to: YTDKQLRLGQRSDVC*ELIHILPCLSSWPP
Trigger: TGGAGGCCATGATGAGAGACAGGGCAGTATGTGTATGAGTTCCCAGCACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTTATCTGTATA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp AGATATACAGATAAGCAGCTTAGGCTGGGACAGAGAAGTGACGTGTaGTGGGAACTCATACACATACTGCCCTGTCTCTCATCATGGCCT +
Preference number: 1 (lower is better)
Translates to: RYTDKQLRLGQRSDV*WELIHILPCLSSWP
Trigger: AGGCCATGATGAGAGACAGGGCAGTATGTGTATGAGTTCCCAGCACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTTATCTGTATATCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp ACATGCTGCATAGGGCTGCATGAGAACAAACATTCAAACACAGGGTaGTTAATGAAGCATGGGGCAGGGAAAACACCAGACATTATCCTC +
Preference number: 1 (lower is better)
Translates to: TCCIGLHENKHSNTG*LMKHGAGKTPDIIL
Trigger: GAGGATAATGTCTGGTGTTTTCCCTGCCCCATGCTTCATTAACCACCCTGTGTTTGAATGTTTGTTCTCATGCAGCCCTATGCAGCATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp ATTTTCAAGTCCATAGTTTCTGTGTCTGTATGTGGATTCTGTGCATaGTGCAAGCATGCGTGTGCCGGTTTGCCCATTTGTGCACGTGTA +
Preference number: 1 (lower is better)
Translates to: IFKSIVSVSVCGFCA*CKHACAGLPICARV
Trigger: TACACGTGCACAAATGGGCAAACCGGCACACGCATGCTTGCATCATGCACAGAATCCACATACAGACACAGAAACTATGGACTTGAAAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp CTTAATTTTCAAGTCCATAGTTTCTGTGTCTGTATGTGGATTCTGTaGATGATGCAAGCATGCGTGTGCCGGTTTGCCCATTTGTGCACG +
Preference number: 1 (lower is better)
Translates to: LNFQVHSFCVCMWIL*MMQACVCRFAHLCT
Trigger: CGTGCACAAATGGGCAAACCGGCACACGCATGCTTGCATCATGCACAGAATCCACATACAGACACAGAAACTATGGACTTGAAAATTAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp GGGACAGACAAAAACATTCCTAGGCAGAGACACCAAGATCAGGCATaGGTAAGAGGAAGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTC +
Preference number: 1 (lower is better)
Translates to: GTDKNIPRQRHQDQA*VRGRSAFLYQFLRV
Trigger: GACTCTAAGAAACTGATACAAGAAAGCTGACCTTCCTCTTACTCATGCCTGATCTTGGTGTCTCTGCCTAGGAATGTTTTTGTCTGTCCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp ACACCAGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTaGTTTTCTCTTTCATCGCCAAAGTCTGACATCTTTACCGAGGCA +
Preference number: 1 (lower is better)
Translates to: TPGYSWMIPSRKTYC*FSLSSPKSDIFTEA
Trigger: TGCCTCGGTAAAGATGTCAGACTTTGGCGATGAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCTGGTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp TTGTCTCTCTTGCTTGACATCACAGTACACCAGGCTATTCCTGGATaGTACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCATCGC +
Preference number: 1 (lower is better)
Translates to: LSLLLDITVHQAIPG*YHPERLIAAFLFHR
Trigger: GCGATGAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCTGGTGTACTGTGATGTCAAGCAAGAGAGACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp TCTTTGGACAATGCCACTTCCTATTTGCATGTCCGGGTGCTGAATTaGCTTCTAGTCTTTCCCTGGAACTTATTTATGCTTGATGCTGAC +
Preference number: 1 (lower is better)
Translates to: SLDNATSYLHVRVLN*LLVFPWNLFMLDAD
Trigger: GTCAGCATCAAGCATAAATAAGTTCCAGGGAAAGACTAGAAGTCAATTCAGCACCCGGACATGCAAATAGGAAGTGGCATTGTCCAAAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp GCTGAGGCAGAGGGTGAGGGAGAAGAGGATGCAGACCCTTATCTGTaGTCATGTATAGGAAAATATCCTGTTTTAGTTTGTGATATATCT +
Preference number: 1 (lower is better)
Translates to: AEAEGEGEEDADPYL*SCIGKYPVLVCDIS
Trigger: AGATATATCACAAACTAAAACAGGATATTTTCCTATACATGAGCACAGATAAGGGTCTGCATCCTCTTCTCCCTCACCCTCTGCCTCAGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp GTCTCTCCAATGCTCTTAATTCCTGAAACTGTATTTTGTGTACACTaGCTTATCAGGAGAGTGAGTACCTTCAACCATTCCGGCTGTTGT +
Preference number: 1 (lower is better)
Translates to: VSPMLLIPETVFCVH*LIRRVSTFNHSGCC
Trigger: ACAACAGCCGGAATGGTTGAAGGTACTCACTCTCCTGATAAGTCAGTGTACACAAAATACAGTTTCAGGAATTAAGAGCATTGGAGAGAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp CTTTACCAAGACAACCATAAGTCAGCTTTATTCAAGTGCAGTGGGTaGTTCCTTACCAAAAGGAATAGCAAGAAGCAACTCCAAAGCGCA +
Preference number: 1 (lower is better)
Translates to: LYQDNHKSALFKCSG*FLTKRNSKKQLQSA
Trigger: TGCGCTTTGGAGTTGCTTCTTGCTATTCCTTTTGGTAAGGAATCACCCACTGCACTTGAATAAAGCTGACTTATGGTTGTCTTGGTAAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp AACTGTTCATCTGTCCGGACTTGTCTCTCCAATGCTCTTAATTCCTaGAACTGTATTTTGTGTACACTGACTTATCAGGAGAGTGAGTAC +
Preference number: 1 (lower is better)
Translates to: NCSSVRTCLSNALNS*NCILCTLTYQESEY
Trigger: GTACTCACTCTCCTGATAAGTCAGTGTACACAAAATACAGTTTCAGGAATTAAGAGCATTGGAGAGACAAGTCCGGACAGATGAACAGTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp GATTCCTTACCAAAAGGAATAGCAAGAAGCAACTCCAAAGCGCAATaGGTATCAGATACAGAAGTTCTTAGCCTTTATCCTCTTAGAGAC +
Preference number: 1 (lower is better)
Translates to: DSLPKGIARSNSKAQ*VSDTEVLSLYPLRD
Trigger: GTCTCTAAGAGGATAAAGGCTAAGAACTTCTGTATCTGATACCCATTGCGCTTTGGAGTTGCTTCTTGCTATTCCTTTTGGTAAGGAATC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 90 bp TTCAAACTAGTACCACTATTTCAATGTAGCTGCCTGACGAATAACTaGAGGATTTCACAATCGTCCATGTATGAACACATTAAATGCCAC +
Preference number: 1 (lower is better)
Translates to: FKLVPLFQCSCLTNN*RISQSSMYEHIKCH
Trigger: GTGGCATTTAATGTGTTCATACATGGACGATTGTGAAATCCTGCAGTTATTCGTCAGGCAGCTACATTGAAATAGTGGTACTAGTTTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 90 bp TTTCTACAAATACTCTGTAACCAAGTCAATACACGGGCAAACAGGTaGATCATCTTAATTTTCAAGTCCATAGTTTCTGTGTCTGTATGT +
Preference number: 1 (lower is better)
Translates to: FLQILCNQVNTRANR*IILIFKSIVSVSVC
Trigger: ACATACAGACACAGAAACTATGGACTTGAAAATTAAGATGATTCACCTGTTTGCCCGTGTATTGACTTGGTTACAGAGTATTTGTAGAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 90 bp TGTTTACAGTTCCAAGGGTTAATTGATATTGAGAACCTCTATAAATaGCCACCCATTTCTACTTACTCCATAGATAAAATAAGAGCTTGG +
Preference number: 1 (lower is better)
Translates to: CLQFQGLIDIENLYK*PPISTYSIDKIRAW
Trigger: CCAAGCTCTTATTTTATCTATGGAGTAAGTAGAAATGGGTGGCCATTTATAGAGGTTCTCAATATCAATTAACCCTTGGAACTGTAAACA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCGTGGGCCCTGGGCTTTaGACACAGGTCTCGCACTGC +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSVGPGL*TQVSHC
Trigger: GCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCAC...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp CATACTGCCCTGTCTCTCATCATGGCCTCCAGTGGGCCCTGGGCTTaGGACACAGGTCTCGCACTGCAGCAGACCCTGCGAGTTACACTC +
Preference number: 2 (lower is better)
Translates to: HTALSLIMASSGPWA*DTGLALQQTLRVTL
Trigger: GAGTGTAACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTATG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCCATCATGGCCTCCAGTaGGCCCTGGGCTTTGGACAC +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSHHGLQ*ALGFGH
Trigger: GTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATG...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGTGGCTGGCCACTGAGTaGTCAGGACCTGCCTACTGC +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLWLATE*SGPAYC
Trigger: GCAGTAGGCAGGTCCTGAGCACTCAGTGGCCAGCCA...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp AGGCCAGCAGAGGCTGCCTCTGGCTTCGATGCGCAAACACACTCCTaGTCCTTGCAGCCATGCTGTCAACAGGCTGTGATGAAGGTTGCT +
Preference number: 2 (lower is better)
Translates to: RPAEAASGFDAQTHS*SLQPCCQQAVMKVA
Trigger: AGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGCAGCCTCTGCTGGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGAAATGTCACTGGCATTaGGAGACAGGTGAAGGGCAG +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGKCHWH*ETGEGQ
Trigger: CTGCCCTTCACCTGTCTCTCAATGCCAGTGACATTT...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCCTCCTGCACCATGCCTaGCTGGATGTTGCCTTGATA +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSLLHHA*LDVALI
Trigger: TATCAAGGCAACATCCAGGCAGGCATGGTGCAGGAG...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGGGGAGGGACAAAGCTTaGGAAATGCTGCTGGCCCCA +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLGRDKA*EMLLAP
Trigger: TGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCC...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp GCAGAGGCTGCCTCTGGCTTCGATGCGCAAACACACTCCTTGTCCTaGCAGCCATGCTGTCAACAGGCTGTGATGAAGGTTGCTGCTTTC +
Preference number: 2 (lower is better)
Translates to: AEAASGFDAQTHSLS*QPCCQQAVMKVAAF
Trigger: GAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGCAGCCTCTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGATCTGCACCCTGTTCTaGGTATTGGTTGTGTGGTCT +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGICTLF*VLVVWS
Trigger: AGACCACACAACCAATACTCAGAACAGGGTGCAGAT...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCTACATGGAGACAGGATaGCCCATGCCTTTCTCTGTC +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSYMETG*PMPFSV
Trigger: GACAGAGAAAGGCATGGGGCATCCTGTCTCCATGTA...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCTGCCCTGGTGGGAACTaGTCAGATATCTCCCTTCAA +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSCPGGN*SDISLQ
Trigger: TTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGCA...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGACAGGTGAAGGGCAGTaGGGGGACAGAAAGGTAGTG +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLTGEGQ*GDRKVV
Trigger: CACTACCTTTCTGTCCCCGCACTGCCCTTCACCTGT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCCCTAGAATACGGCTTTaGTCCATCAGCCCTTGTCCT +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSPRIRL*SISPCP
Trigger: AGGACAAGGGCTGATGGAGCAAAGCCGTATTCTAGG...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTGCCTCCAGTGGGCCCTaGGCTTTGGACACAGGTCTC +
Preference number: 2 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTASSGP*ALDTGL
Trigger: GAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGC...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp ACAGGATGCCCCATGCCTTTCTCTGTCCCCACCCACCTTACTGCCTaGAGACACTGTCTCTCAATGAACCAGAAGCTCACCATTTCCGGC +
Preference number: 2 (lower is better)
Translates to: TGCPMPFSVPTHLTA*RHCLSMNQKLTISG
Trigger: GCCGGAAATGGTGAGCTTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAGAAAGGCATGGGGCATCCTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGCACACTCCTTGTCCTTaGAGCCATGCTGTCAACAGG +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLHTPCP*SHAVNR
Trigger: CCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTG...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCATAAGCAGCTTAGGCTaGGACAGAGAAGTGACGTGT +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSISSLG*DREVTC
Trigger: ACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTTAT...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCCCCTGTTCTGAGTATTaGTTGTGTGGTCTTCTCCAG +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSPCSEY*LCGLLQ
Trigger: CTGGAGAAGACCACACAACCAATACTCAGAACAGGG...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGAATCTCCCACTGCTATaGGGAAGAGCTGTGGCAGAA +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLNLPLL*GRAVAE
Trigger: TTCTGCCACAGCTCTTCCTCATAGCAGTGGGAGATT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCAGCTTCTATCTCAGCTaGTCCCTGTCTTTTGTCTCT +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSSFYLS*SLSFVS
Trigger: AGAGACAAAAGACAGGGAGCAGCTGAGATAGAAGCT...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGTGCCCAGTGGTTTCTTaGTCAGGATGGTGTGAAAGC +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLCPVVS*SGWCES
Trigger: GCTTTCACACCATCCTGACCAAGAAACCACTGGGCA...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGGGTGCTGAACTCTACTaGCTTGGTGGCAGGTGCTCT +
Preference number: 2 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGGAELY*LGGRCS
Trigger: AGAGCACCTGCCACCAAGCCAGTAGAGTTCAGCACC...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGTATGAGGAAGAGCTGTaGCAGAACTGGCTTTGGGGA +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLYEEEL*QNWLWG
Trigger: TCCCCAAAGCCAGTTCTGCCACAGCTCTTCCTCATA...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp AGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTaGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTC +
Preference number: 2 (lower is better)
Translates to: RITCSKWPSCFTLAP*GSLLSPTPVVSHGF
Trigger: GAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTCGTAGGGCAGCACTCTaGCCAGTGGTTTCTTGGTCA +
Preference number: 2 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTRRAAL*PVVSWS
Trigger: TGACCAAGAAACCACTGGGCAGAGTGCTGCCCTACG...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGCCTTTTAAAGATATGTaGCTGGAGAGAGTGGGAAAA +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGPFKDM*LERVGK
Trigger: TTTTCCCACTCTCTCCAGGCACATATCTTTAAAAGG...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTGGTGGCAGGTGCTCTaGCCACTAATTACTGCTCAG +
Preference number: 2 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTWWQVL*PLITAQ
Trigger: CTGAGCAGTAATTAGTGGTCAGAGCACCTGCCACCA...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGTGTTTTCAGATAAATTaGCCCCAGTTTAGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGCFQIN*PQFSLF
Trigger: GAACAAGCTAAACTGGGGTCAATTTATCTGAAAACA...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTGGCAGTCCTCAGGTGTaGAGAGCAAGTTCTCTTGTC +
Preference number: 2 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFGSPQV*RASSLV
Trigger: GACAAGAGAACTTGCTCTGCACACCTGAGGACTGCC...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCTGTCCTCATTCCATTTaGCTGAACGTCCTGAATTTT +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSCPHSI*LNVLNF
Trigger: AAAATTCAGGACGTTCAGGCAAATGGAATGAGGACA...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGTCCAGAAAGACTTATTaGTGCTTTTCTCTTTCATCG +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGSRKTY*CFSLSS
Trigger: CGATGAAAGAGAAAAGCAGCAATAAGTCTTTCTGGA...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGCAGCACTCTGCCCAGTaGTTTCTTGGTCAGGATGGT +
Preference number: 2 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLQHSAQ*FLGQDG
Trigger: ACCATCCTGACCAAGAAACCACTGGGCAGAGTGCTG...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGCATTTCCGGCTAACTTaGCTGGCCACTGAGTGCTCA +
Preference number: 2 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLHFRLT*LATECS
Trigger: TGAGCACTCAGTGGCCAGCCAAGTTAGCCGGAAATG...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGCAAAGATTAGCAGGCTaGGGTAGAGCACATGGGAAC +
Preference number: 2 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGQRLAG*GRAHGN
Trigger: GTTCCCATGTGCTCTACCCCAGCCTGCTAATCTTTG...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGAGACATTATCCTCCTTaGGAGGATCTATTTGATGAA +
Preference number: 2 (lower is better)
Translates to: GEMARQLGTLAALPEEPGRHYPP*EDLFDE
Trigger: TTCATCAAATAGATCCTCCCAAGGAGGATAATGTCT...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGGTCCCAGGGCTTTGCTaGAATGTGGTCTCTTTACAT +
Preference number: 2 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGVPGLC*NVVSLH
Trigger: ATGTAAAGAGACCACATTTCAGCAAAGCCCTGGGAC...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGCTGTGGCTGCGGATATaGAACAGATATACAGATAAG +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLLWLRI*NRYTDK
Trigger: CTTATCTGTATATCTGTTGCATATCCGCAGCCACAG...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGGTCTTTTGTCTCTCTTaGTTGACATCACAGTACACC +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLVFCLS*LTSQYT
Trigger: GGTGTACTGTGATGTCAAGCAAGAGAGACAAAAGAC...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCACCCTGTCTCTCATCATaGCCTCCAGTGGGCCCTGGG +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSPCLSS*PPVGPG
Trigger: CCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGG...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGAGCTCTAGTGTTTATTaGCTTCCTGTACATGCATGT +
Preference number: 2 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLSSSVY*LPVHAC
Trigger: ACATGCATGTACAGGAAGTCAATAAACACTAGAGCT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGAATGAACTGAATATCTaGACCTGTAAGGCAGGCCCA +
Preference number: 2 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGNELNI*TCKAGP
Trigger: TGGGCCTGCCTTACAGGTTCAGATATTCAGTTCATT...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGATTCTGATAGTCATCTaGATTTGGAGGGCTGCCTCT +
Preference number: 2 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGILIVI*IWRAAS
Trigger: AGAGGCAGCCCTCCAAATGCAGATGACTATCAGAAT...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTAAGACAGGATGCCCCATaGCTTTCTCTGTCCCCACCC +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLRQDAP*LSLSPP
Trigger: GGGTGGGGACAGAGAAAGGCATGGGGCATCCTGTCT...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTACAAAGCTTGGGAAATaGTGCTGGCCCCAGGTTATA +
Preference number: 2 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFTKLGK*CWPQVI
Trigger: TATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGT...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGATAGTCATCTGCATTTaGAGGGCTGCCTCTCAAAGG +
Preference number: 2 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLIVICI*RAASQR
Trigger: CCTTTGAGAGGCAGCCCTCCAAATGCAGATGACTAT...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCACTCCCCACACTTCCTTaGGGGCTTGGCTGTTTCCTG +
Preference number: 2 (lower is better)
Translates to: NKTTGAPVMIFERIIPVALPTLP*GLGCFL
Trigger: CAGGAAACAGCCAAGCCCCCAAGGAAGTGTGGGGAG...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCTTATACCTGTGGCACTaGGGAATTAAATTTAACAAG +
Preference number: 2 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSLYLWH*GIKFNK
Trigger: CTTGTTAAATTTAATTCCCCAGTGCCACAGGTATAA...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp TGTTATTCAAACTCGGCAGTCCTCAGGTGTGCAGAGCAAGTTCTCTaGTCCACGAGGCATCCAAACCAGAATCCTATCTTTACCTGGATG +
Preference number: 2 (lower is better)
Translates to: CYSNSAVLRCAEQVL*STRHPNQNPIFTWM
Trigger: CATCCAGGTAAAGATAGGATTCTGGTTTGGATGCCTCGTGGACAAGAGAACTTGCTCTGCACACCTGAGGACTGCCGAGTTTGAATAACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTAAACTTGGCTGGCCACTaGGTGCTCAGGACCTGCCTA +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLNLAGH*VLRTCL
Trigger: TAGGCAGGTCCTGAGCACTCAGTGGCCAGCCAAGTT...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTGACACTGTCTCTCAATaGACCAGAAGCTCACCATTT +
Preference number: 2 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFDTVSQ*TRSSPF
Trigger: AAATGGTGAGCTTCTGGTTCATTGAGAGACAGTGTC...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTACCCCACCCACCTTACTaGCTTGAGACACTGTCTCTC +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLPHPPY*LETLSL
Trigger: GAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGG...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTCAGAGAAGTGACGTGTaGTGGGAACTCATACACATA +
Preference number: 2 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTQRSDV*WELIHI
Trigger: TATGTGTATGAGTTCCCAGCACACGTCACTTCTCTG...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAGCTCCTCCTGCACCATaGCTGCCTGGATGTTGCCTT +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSAPPAP*LPGCCL
Trigger: AAGGCAACATCCAGGCAGGCATGGTGCAGGAGGAGC...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTACCTGGGAACGTAACCTaGGAGGGACAAAGCTTGGGA +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLPGNVT*EGQSLG
Trigger: TCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGG...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTAGGCTCTGGGAAGCCCTaGCCTTCAGTCTTAGGGAGT +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLGSGKP*PSVLGS
Trigger: ACTCCCTAAGACTGAAGGCCAGGGCTTCCCAGAGCC...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp TGCCTCCAGCTCTGCATTCACACCAATGCTGTTTGTCCCAGGGCTTaGCTGAAATGTGGTCTCTTTACATTCACTGAAACAGCACTTCTT +
Preference number: 2 (lower is better)
Translates to: CLQLCIHTNAVCPRA*LKCGLFTFTETALL
Trigger: AAGAAGTGCTGTTTCAGTGAATGTAAAGAGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTTGCCTGCCTGGATGTTaGCTTGATAATAATGAACTG +
Preference number: 2 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFCLPGC*LDNNEL
Trigger: CAGTTCATTATTATCAAGGCAACATCCAGGCAGGCA...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGTGGTGTGAAAGCCCTTaGGGTTTTCTGTGTTTGGTG +
Preference number: 2 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQWCESP*GFLCLV
Trigger: CACCAAACACAGAAAACCTCAAGGGCTTTCACACCA...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTAGGCTGTGATGAAGGTTaGTGCTTTCAGCCTCAGTGT +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLGCDEG*CFQPQC
Trigger: ACACTGAGGCTGAAAGCAGCAACCTTCATCACAGCC...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCATTACCCTGGCTCCTTTaGGGTCACTTCTCAGTCCCA +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSLPWLL*GHFSVP
Trigger: TGGGACTGAGAAGTGACCCCAAAGGAGCCAGGGTAA...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCACTTCTTGCTTTACCCTaGCTCCTTTGGGGTCACTTC +
Preference number: 2 (lower is better)
Translates to: NKTTGAPVMIFERIIPVALLALP*LLWGHF
Trigger: GAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAG...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp GCACCCATTAGGATGGCCAAATCTACAACAAACATCATCATACTGTaGGGCATGAAGAACAGGAACTCTCACTCTGAGCTGGTAGATTCA +
Preference number: 2 (lower is better)
Translates to: APIRMAKSTTNIIIL*GMKNRNSHSELVDS
Trigger: TGAATCTACCAGCTCAGAGTGAGAGTTCCTGTTCTTCATGCCCAACAGTATGATGATGTTTGTTGTAGATTTGGCCATCCTAATGGGTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTAAAGCTTGGGAAATGCTaGTGGCCCCAGGTTATAATG +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLKLGKC*WPQVIM
Trigger: CATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTT...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCATCAGTTCCTCCCTTTTaGCATGTGGGTGCTGAACTC +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSSVPPF*HVGAEL
Trigger: GAGTTCAGCACCCACATGGCAAAAGGGAGGAACTGA...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTACTATCTTTACCTGGATaGGTGACAGTGGTGATGGCA +
Preference number: 2 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLLSLPG*VTVVMA
Trigger: TGCCATCACCACTGTCACCCATCCAGGTAAAGATAG...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp CTGCTGGCCCCAGGTTATAATGGGAGATTGGGTAAACGCCTCTATTaGGGCAGTTTACTTGCGTTGTTTCATTTCTACAAATACTCTGTA +
Preference number: 2 (lower is better)
Translates to: LLAPGYNGRLGKRLY*GSLLALFHFYKYSV
Trigger: TACAGAGTATTTGTAGAAATGAAACAACGCAAGTAAACTGCCCAAATAGAGGCGTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp TTGCTAAAACCCTCACCAAACTGTAGAGAGAGCTTGTTGTCACGGTaGCTTTTCAAACTAGTACCACTATTTCAATGTAGCTGCCTGACG +
Preference number: 2 (lower is better)
Translates to: LLKPSPNCRESLLSR*LFKLVPLFQCSCLT
Trigger: CGTCAGGCAGCTACATTGAAATAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp ACTGAACTGACATTTCATGTAGTGGAATATACTTCCCATGGTTGTTaGAGCCTGGCTTTTCCCATAGCATGTCATGGAGGTTCTTCTACG +
Preference number: 2 (lower is better)
Translates to: TELTFHVVEYTSHGC*SLAFPIACHGGSST
Trigger: CGTAGAAGAACCTCCATGACATGCTATGGGAAAAGCCAGGCTCAAACAACCATGGGAAGTATATTCCACTACATGAAATGTCAGTTCAGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTACTAGTGGCCTTCAGATaGAGATGTAGAACTCTCAGC +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLLVAFR*RCRTLS
Trigger: GCTGAGAGTTCTACATCTTCATCTGAAGGCCACTAG...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCACACCAACCCCATTCCTaGCTGTCATGGCTTGAATAT +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSHQPHS*LSWLEY
Trigger: ATATTCAAGCCATGACAGTCAGGAATGGGGTTGGTG...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCAAACTCATACACATACTaGCCTGTCTCTCATCATGGC +
Preference number: 2 (lower is better)
Translates to: NKTTGAPVMIFERIIPVANSYTY*PVSHHG
Trigger: GCCATGATGAGAGACAGGGCAGTATGTGTATGAGTT...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTACAATTGCTAGGGTTGTaGTTCTGTATACCCCCTAGC +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLQLLGL*FCIPPS
Trigger: GCTAGGGGGTATACAGAACCACAACCCTAGCAATTG...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp AATCGTCCATGTATGAACACATTAAATGCCACAAATGTCACTATCTaGCTAAGGCGAAGATGCTCTGAGGGCATGGCATCTAGATCATGT +
Preference number: 2 (lower is better)
Translates to: NRPCMNTLNATNVTI*LRRRCSEGMASRSC
Trigger: ACATGATCTAGATGCCATGCCCTCAGAGCATCTTCGCCTTAGCAAGATAGTGACATTTGTGGCATTTAATGTGTTCATACATGGACGATT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp TACCCATGGTTGCTAAAACCCTCACCAAACTGTAGAGAGAGCTTGTaGTCACGGTTGCTTTTCAAACTAGTACCACTATTTCAATGTAGC +
Preference number: 2 (lower is better)
Translates to: YPWLLKPSPNCRESL*SRLLFKLVPLFQCS
Trigger: GCTACATTGAAATAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAACCATGGGTA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCTGTATGTGGATTCTGTaGATGATGCAAGCATGCGTG +
Preference number: 2 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFCMWIL*MMQACV
Trigger: CACGCATGCTTGCATCATGCACAGAATCCACATACA...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTAGAGGTTTTCTGTGTTTaGTGGGAGGAACTGGAAATC +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLEVFCV*WEELEI
Trigger: GATTTCCAGTTCCTCCCACCAAACACAGAAAACCTC...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCATTCAAGGAGCAACAATaGGCAAAAGGCGTATGTATG +
Preference number: 2 (lower is better)
Translates to: NKTTGAPVMIFERIIPVAFKEQQ*AKGVCM
Trigger: CATACATACGCCTTTTGCCCATTGTTGCTCCTTGAA...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTAGTTCGCAAGGCTCTTTaGACAATGCCACTTCCTATT +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLVRKAL*TMPLPI
Trigger: AATAGGAAGTGGCATTGTCCAAAGAGCCTTGCGAAC...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp AGTTACCCATGGTTGCTAAAACCCTCACCAAACTGTAGAGAGAGCTaGTTGTCACGGTTGCTTTTCAAACTAGTACCACTATTTCAATGT +
Preference number: 2 (lower is better)
Translates to: SYPWLLKPSPNCRES*LSRLLFKLVPLFQC
Trigger: ACATTGAAATAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAACCATGGGTAACT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCGAGCACATGGGAACATaGTTTCTGTACAGTGTGATT +
Preference number: 2 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFEHMGT*FLYSVI
Trigger: AATCACACTGTACAGAAATCATGTTCCCATGTGCTC...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCTTCAATGTAGCTGCCTaGCGAATAACTGCAGGATTT +
Preference number: 2 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFFNVAA*RITAGF
Trigger: AAATCCTGCAGTTATTCGTCAGGCAGCTACATTGAA...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCATTCTGTGTCTGTATGTaGATTCTGTGCATGATGCAA +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSFCVCM*ILCMMQ
Trigger: TTGCATCATGCACAGAATCCACATACAGACACAGAA...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR TCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTATATGCTCTTAGCATATaGGCAATACACAAGCTTCTA +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLYALSI*AIHKLL
Trigger: TAGAAGCTTGTGTATTGCTCATATGCTAAGAGCATA...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTATTGAGCTATTATATATaGGTATGCCCAACTATGACC +
Preference number: 2 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLLSYYI*VCPTMT
Trigger: GGTCATAGTTGGGCATACCCATATATAATAGCTCAA...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR GCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCATTTGGGCAGTTTACTTaGGTTGTTTCATTTCTACAA +
Preference number: 2 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSFGQFT*VVSFLQ
Trigger: TTGTAGAAATGAAACAACGCAAGTAAACTGCCCAAA...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 90 bp CTCTTTTCAGTGGTGCTAAGATTCTCATTGTTGGAAACTAACCTGTaGCATAAAGACTACATTCTTTATTCTGATAGTCATCTGCATTTG +
Preference number: 2 (lower is better)
Translates to: LFSVVLRFSLLETNL*HKDYILYSDSHLHL
Trigger: CAAATGCAGATGACTATCAGAATAAAGAATGTAGTCTTTATGCAACAGGTTAGTTTCCAACAATGAGAATCTTAGCACCACTGAAAAGAG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp ACTGAGTGCTCAGGACCTGCCTACTGCCGCCCCCACTaGAGGGGATCACAGGCACAAGTAGCCTGTGCCCAG +
Preference number: 3 (lower is better)
Translates to: TECSGPAYCRPH*RGSQAQVACAQ
Trigger: CTGGGCACAGGCTACTTGTGCCTGTGATCCCCTGCAGTGGGGGCGGCAGTAGGCAGGTCCTGAGCACTCAGT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp TGTCTCTCATCATGGCCTCCAGTGGGCCCTGGGCTTTaGACACAGGTCTCGCACTGCAGCAGACCCTGCGAG +
Preference number: 3 (lower is better)
Translates to: CLSSWPPVGPGL*TQVSHCSRPCE
Trigger: CTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp AGAAGCTCACCATTTCCGGCTAACTTGGCTGGCCACTaGGTGCTCAGGACCTGCCTACTGCCGCCCCCACTG +
Preference number: 3 (lower is better)
Translates to: RSSPFPANLAGH*VLRTCLLPPPL
Trigger: CAGTGGGGGCGGCAGTAGGCAGGTCCTGAGCACTCAGTGGCCAGCCAAGTTAGCCGGAAATGGTGAGCTTCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CCAGTGGGCCCTGGGCTTTGGACACAGGTCTCGCACTaGAGCAGACCCTGCGAGTTACACTCCCACTTTTGC +
Preference number: 3 (lower is better)
Translates to: PVGPGLWTQVSH*SRPCELHSHFC
Trigger: GCAAAAGTGGGAGTGTAACTCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CTTAGGCAGGCCAGCAGAGGCTGCCTCTGGCTTCGATaGGCAAACACACTCCTTGTCCTTGCAGCCATGCTG +
Preference number: 3 (lower is better)
Translates to: LRQASRGCLWLR*ANTLLVLAAML
Trigger: CAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGCAGCCTCTGCTGGCCTGCCTAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp ACAACACAAAGGACCCGAGGCCAGGGCTTTGGCTGCTaGTTCTGTCTTCACCAGAATCTCCCCCGGGGGATC +
Preference number: 3 (lower is better)
Translates to: TTQRTRGQGFGC*FCLHQNLPRGI
Trigger: GATCCCCCGGGGGAGATTCTGGTGAAGACAGAAGCAGCAGCCAAAGCCCTGGCCTCGGGTCCTTTGTGTTGT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGAGTGGGCCCTGGGCTTaGGACACAGGTCTCGCACTG +
Preference number: 3 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLSGPWA*DTGLAL
Trigger: CAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCTGCATCCTGGGGCTCTaGACTTGTGCTGTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSCILGL*TCAVAR
Trigger: CCTAGCTACAGCACAAGTCAAGAGCCCCAGGATGCA...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp AGGCCCCACAGGCTCCTCCGACTCCTCAAAGAGTCCTaGCCCACTGTACACCGTGTATCATCTGACATGGCG +
Preference number: 3 (lower is better)
Translates to: RPHRLLRLLKES*PTVHRVSSDMA
Trigger: CGCCATGTCAGATGATACACGGTGTACAGTGGGTCAGGACTCTTTGAGGAGTCGGAGGAGCCTGTGGGGCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GCAGCCATGCTGTCAACAGGCTGTGATGAAGGTTGCTaGTTTCAGCCTCAGTGTGACCTGCAGGCTGGTGGC +
Preference number: 3 (lower is better)
Translates to: AAMLSTGCDEGC*FQPQCDLQAGG
Trigger: GCCACCAGCCTGCAGGTCACACTGAGGCTGAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp GCCCTGGTGGGAACTGCTCAGATATCTCCCTTCAAATaGCTTAGGCAGGCCAGCAGAGGCTGCCTCTGGCTT +
Preference number: 3 (lower is better)
Translates to: ALVGTAQISPFK*LRQASRGCLWL
Trigger: AAGCCAGAGGCAGCCTCTGCTGGCCTGCCTAAGTCATTTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp AGGCACAGTGCTCACGTAGGGCAGCACTCTGCCCAGTaGTTTCTTGGTCAGGATGGTGTGAAAGCCCTTGAG +
Preference number: 3 (lower is better)
Translates to: RHSAHVGQHSAQ*FLGQDGVKALE
Trigger: CTCAAGGGCTTTCACACCATCCTGACCAAGAAACCACTGGGCAGAGTGCTGCCCTACGTGAGCACTGTGCCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp TGGGAACTCATACACATACTGCCCTGTCTCTCATCATaGCCTCCAGTGGGCCCTGGGCTTTGGACACAGGTC +
Preference number: 3 (lower is better)
Translates to: WELIHILPCLSS*PPVGPGLWTQV
Trigger: GACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAGGGCAGTATGTGTATGAGTTCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGTGGGAGGGACAAAGCTaGGGAAATGCTGCTGGCCCC +
Preference number: 3 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGWEGQS*GNAAGP
Trigger: GGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCA...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TGTGCAGGAGACCTTAGTGGGAAGGTGATCAGATTCTaGGTGAGCTGGAGATGCCCTGGTGGGAACTGCTCA +
Preference number: 3 (lower is better)
Translates to: CAGDLSGKVIRF*VSWRCPGGNCS
Trigger: TGAGCAGTTCCCACCAGGGCATCTCCAGCTCACGCAGAATCTGATCACCTTCCCACTAAGGTCTCCTGCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp AGAGGACACAACCTGCAGGAGTCAGTTCCTCCCTTTTaGCATGTGGGTGCTGAACTCTACTGGCTTGGTGGC +
Preference number: 3 (lower is better)
Translates to: RGHNLQESVPPF*HVGAELYWLGG
Trigger: GCCACCAAGCCAGTAGAGTTCAGCACCCACATGGCAAAAGGGAGGAACTGACTCCTGCAGGTTGTGTCCTCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TTCCTTGGGGGCTTGGCTGTTTCCTGCCTCCAGCTCTaGATTCACACCAATGCTGTTTGTCCCAGGGCTTTG +
Preference number: 3 (lower is better)
Translates to: FLGGLAVSCLQL*IHTNAVCPRAL
Trigger: CAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCCAAGCCCCCAAGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TGCTCCCCACACTTCCTTGGGGGCTTGGCTGTTTCCTaGCTCCAGCTCTGCATTCACACCAATGCTGTTTGT +
Preference number: 3 (lower is better)
Translates to: CSPHFLGGLAVS*LQLCIHTNAVC
Trigger: ACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCCAAGCCCCCAAGGAAGTGTGGGGAGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TTAGCCCCGAGCTCCCTTCGTGGCGTTAGGATTACCTaGTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCT +
Preference number: 3 (lower is better)
Translates to: LAPSSLRGVRIT*SKWPSCFTLAP
Trigger: AGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAACGCCACGAAGGGAGCTCGGGGCTAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CTTAGGAGTCACTCTGATGCACATAGCCCTGCCTACTaGTCCTGCTCTGAGGACCGGAGCCTAGCAAATAGC +
Preference number: 3 (lower is better)
Translates to: LRSHSDAHSPAY*SCSEDRSLANS
Trigger: GCTATTTGCTAGGCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACTCCTAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CCCCCACTGCAGGGGATCACAGGCACAAGTAGCCTGTaGCCAGCATGCTATACACGTGCTGTTATTCAAACT +
Preference number: 3 (lower is better)
Translates to: PPLQGITGTSSL*PACYTRAVIQT
Trigger: AGTTTGAATAACAGCACGTGTATAGCATGCTGGGCACAGGCTACTTGTGCCTGTGATCCCCTGCAGTGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CGTAACCTGGGAGGGACAAAGCTTGGGAAATGCTGCTaGCCCCAGGTTATAATGGGAGATTGGGTAAACGCC +
Preference number: 3 (lower is better)
Translates to: RNLGGTKLGKCC*PQVIMGDWVNA
Trigger: GGCGTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTaGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTC +
Preference number: 3 (lower is better)
Translates to: ALSGLLALPWLL*GHFSVPLQWFL
Trigger: GAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTaGCTCCTTTGGGGTCACTTCTCAGTCCCACTCCAG +
Preference number: 3 (lower is better)
Translates to: GLPALSGLLALP*LLWGHFSVPLQ
Trigger: CTGGAGTGGGACTGAGAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp AGCTCCCTTCGTGGCGTTAGGATTACCTGCTCTAAGTaGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGTCA +
Preference number: 3 (lower is better)
Translates to: SSLRGVRITCSK*PSCFTLAPLGS
Trigger: TGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAACGCCACGAAGGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGTCACACCAATGCTGTTaGTCCCAGGGCTTTGCTGAA +
Preference number: 3 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLSHQCC*SQGFAE
Trigger: TTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGA...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp AGCACTCTGCCCAGTGGTTTCTTGGTCAGGATGGTGTaGAAGCCCTTGAGGTTTTCTGTGTTTGGTGGGAGG +
Preference number: 3 (lower is better)
Translates to: STLPSGFLVRMV*KPLRFSVFGGR
Trigger: CCTCCCACCAAACACAGAAAACCTCAAGGGCTTTCACACCATCCTGACCAAGAAACCACTGGGCAGAGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp ACATGCCAGCAAATGTCACTGGCATTGAGAGACAGGTaGAGGGCAGTGCGGGGACAGAAAGGTAGTGAGGAA +
Preference number: 3 (lower is better)
Translates to: TCQQMSLALRDR*RAVRGQKGSEE
Trigger: TTCCTCACTACCTTTCTGTCCCCGCACTGCCCTTCACCTGTCTCTCAATGCCAGTGACATTTGCTGGCATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TGGGAACGTAACCTGGGAGGGACAAAGCTTGGGAAATaGTGCTGGCCCCAGGTTATAATGGGAGATTGGGTA +
Preference number: 3 (lower is better)
Translates to: WERNLGGTKLGK*CWPQVIMGDWV
Trigger: TACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp AGTGGGAAGGTGATCAGATTCTGCGTGAGCTGGAGATaGCCTGGTGGGAACTGCTCAGATATCTCCCTTCAA +
Preference number: 3 (lower is better)
Translates to: SGKVIRFCVSWR*PGGNCSDISLQ
Trigger: TTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGCATCTCCAGCTCACGCAGAATCTGATCACCTTCCCACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GGCTGTTTCCTGCCTCCAGCTCTGCATTCACACCAATaGTGTTTGTCCCAGGGCTTTGCTGAAATGTGGTCT +
Preference number: 3 (lower is better)
Translates to: GCFLPPALHSHQ*CLSQGFAEMWS
Trigger: AGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAAACAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CGTGGCGTTAGGATTACCTGCTCTAAGTGGCCTTCTTaGTTTACCCTGGCTCCTTTGGGGTCACTTCTCAGT +
Preference number: 3 (lower is better)
Translates to: RGVRITCSKWPS*FTLAPLGSLLS
Trigger: ACTGAGAAGTGACCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAACGCCACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CTTAGTTCGCCTCGGATGGATCATGGAATCTCCCACTaGTATGAGGAAGAGCTGTGGCAGAACTGGCTTTGG +
Preference number: 3 (lower is better)
Translates to: LSSPRMDHGISH*YEEELWQNWLW
Trigger: CCAAAGCCAGTTCTGCCACAGCTCTTCCTCATAGCAGTGGGAGATTCCATGATCCATCCGAGGCGAACTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CGAGGCATCCAAACCAGAATCCTATCTTTACCTGGATaGGTGACAGTGGTGATGGCAAGCAGTCTCCCACAG +
Preference number: 3 (lower is better)
Translates to: RGIQTRILSLPG*VTVVMASSLPQ
Trigger: CTGTGGGAGACTGCTTGCCATCACCACTGTCACCCATCCAGGTAAAGATAGGATTCTGGTTTGGATGCCTCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp TCCACGAGGCATCCAAACCAGAATCCTATCTTTACCTaGATGGGTGACAGTGGTGATGGCAAGCAGTCTCCC +
Preference number: 3 (lower is better)
Translates to: STRHPNQNPIFT*MGDSGDGKQSP
Trigger: GGGAGACTGCTTGCCATCACCACTGTCACCCATCCAGGTAAAGATAGGATTCTGGTTTGGATGCCTCGTGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GGAGCAACAATGGGCAAAAGGCGTATGTATGTGATCTaGACGCAGTCACCGGGACGATCTGTGTTGCAACTC +
Preference number: 3 (lower is better)
Translates to: GATMGKRRMYVI*TQSPGRSVLQL
Trigger: GAGTTGCAACACAGATCGTCCCGGTGACTGCGTCCAGATCACATACATACGCCTTTTGCCCATTGTTGCTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGTGCTTGATGCTGACCTaGTTTTCAGATAAATTGACC +
Preference number: 3 (lower is better)
Translates to: GEMARQLGTLAALPEEPGCLMLT*FSDKLT
Trigger: GGTCAATTTATCTGAAAACAAGGTCAGCATCAAGCA...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp TTCAAGGAGCAACAATGGGCAAAAGGCGTATGTATGTaGTCTGGACGCAGTCACCGGGACGATCTGTGTTGC +
Preference number: 3 (lower is better)
Translates to: FKEQQWAKGVCM*SGRSHRDDLCC
Trigger: GCAACACAGATCGTCCCGGTGACTGCGTCCAGATCACATACATACGCCTTTTGCCCATTGTTGCTCCTTGAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp TGCCTGGAAGTCAGTCTTCTCCTAGTGGCCTTCAGATaGAGATGTAGAACTCTCAGCTCCTCCTGCACCATG +
Preference number: 3 (lower is better)
Translates to: CLEVSLLLVAFR*RCRTLSSSCTM
Trigger: CATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCCACTAGGAGAAGACTGACTTCCAGGCA
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CACGTGCTGTTATTCAAACTCGGCAGTCCTCAGGTGTaGAGAGCAAGTTCTCTTGTCCACGAGGCATCCAAA +
Preference number: 3 (lower is better)
Translates to: HVLLFKLGSPQV*RASSLVHEASK
Trigger: TTTGGATGCCTCGTGGACAAGAGAACTTGCTCTGCACACCTGAGGACTGCCGAGTTTGAATAACAGCACGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GAACGTAACCTGGGAGGGACAAAGCTTGGGAAATGCTaGTGGCCCCAGGTTATAATGGGAGATTGGGTAAAC +
Preference number: 3 (lower is better)
Translates to: ERNLGGTKLGKC*WPQVIMGDWVN
Trigger: GTTTACCCAATCTCCCATTATAACCTGGGGCCAGCAGCATTTCCCAAGCTTTGTCCCTCCCAGGTTACGTTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TTCGATGCGCAAACACACTCCTTGTCCTTGCAGCCATaGTGTCAACAGGCTGTGATGAAGGTTGCTGCTTTC +
Preference number: 3 (lower is better)
Translates to: FDAQTHSLSLQP*CQQAVMKVAAF
Trigger: GAAAGCAGCAACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GATAAGCAGCTTAGGCTGGGACAGAGAAGTGACGTGTaGTGGGAACTCATACACATACTGCCCTGTCTCTCA +
Preference number: 3 (lower is better)
Translates to: DKQLRLGQRSDV*WELIHILPCLS
Trigger: TGAGAGACAGGGCAGTATGTGTATGAGTTCCCAGCACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTTATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GGTTCTATCTCCATACTACTTATGGCTGGTTCAGGCTaGATCCTGGGGCTCTTGACTTGTGCTGTAGCTAGG +
Preference number: 3 (lower is better)
Translates to: GSISILLMAGSG*ILGLLTCAVAR
Trigger: CCTAGCTACAGCACAAGTCAAGAGCCCCAGGATGCAGCCTGAACCAGCCATAAGTAGTATGGAGATAGAACC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GAAGGTGATCAGATTCTGCGTGAGCTGGAGATGCCCTaGTGGGAACTGCTCAGATATCTCCCTTCAAATGAC +
Preference number: 3 (lower is better)
Translates to: EGDQILRELEMP*WELLRYLPSND
Trigger: GTCATTTGAAGGGAGATATCTGAGCAGTTCCCACCAGGGCATCTCCAGCTCACGCAGAATCTGATCACCTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp AAGCAGCTTAGGCTGGGACAGAGAAGTGACGTGTGCTaGGAACTCATACACATACTGCCCTGTCTCTCATCA +
Preference number: 3 (lower is better)
Translates to: KQLRLGQRSDVC*ELIHILPCLSS
Trigger: TGATGAGAGACAGGGCAGTATGTGTATGAGTTCCCAGCACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp TCTGCAGCTGAGGACAGTTACCCACTTGGGGCATTCTaGTTAGTGGGTGATAGACATAGCTGCCAGGATAGT +
Preference number: 3 (lower is better)
Translates to: SAAEDSYPLGAF*LVGDRHSCQDS
Trigger: ACTATCCTGGCAGCTATGTCTATCACCCACTAATCAGAATGCCCCAAGTGGGTAACTGTCCTCAGCTGCAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TGTGTCTGTATGTGGATTCTGTGCATGATGCAAGCATaGGTGTGCCGGTTTGCCCATTTGTGCACGTGTACA +
Preference number: 3 (lower is better)
Translates to: CVCMWILCMMQA*VCRFAHLCTCT
Trigger: TGTACACGTGCACAAATGGGCAAACCGGCACACGCATGCTTGCATCATGCACAGAATCCACATACAGACACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp TTGGGAATCAGGTTCTATCTCCATACTACTTATGGCTaGTTCAGGCTGCATCCTGGGGCTCTTGACTTGTGC +
Preference number: 3 (lower is better)
Translates to: LGIRFYLHTTYG*FRLHPGALDLC
Trigger: GCACAAGTCAAGAGCCCCAGGATGCAGCCTGAACCAGCCATAAGTAGTATGGAGATAGAACCTGATTCCCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTGTTTGTCCCAGGGCTTaGCTGAAATGTGGTCTCTTT +
Preference number: 3 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTVCPRA*LKCGLF
Trigger: AAAGAGACCACATTTCAGCAAAGCCCTGGGACAAAC...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAGTCCCCTACTCTGCCTaGCTCCCCACACTTCCTTGG +
Preference number: 3 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSVPYSA*LPTLPW
Trigger: CCAAGGAAGTGTGGGGAGCAAGGCAGAGTAGGGGAC...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp CCAGTGGTTTCTTGGTCAGGATGGTGTGAAAGCCCTTaGGGTTTTCTGTGTTTGGTGGGAGGAACTGGAAAT +
Preference number: 3 (lower is better)
Translates to: PVVSWSGWCESP*GFLCLVGGTGN
Trigger: ATTTCCAGTTCCTCCCACCAAACACAGAAAACCTCAAGGGCTTTCACACCATCCTGACCAAGAAACCACTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp AGAGCACATGGGAACATGATTTCTGTACAGTGTGATTaGATTCCTGGGAACGTAACCTGGGAGGGACAAAGC +
Preference number: 3 (lower is better)
Translates to: RAHGNMISVQCD*IPGNVTWEGQS
Trigger: GCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGAAATCATGTTCCCATGTGCTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp AGCATTAAAGCCATCGAGGGGACTAACAGGCTAGCTTaGTCTAAGGAGCAATTTCAGTGGAGGAAGCCAAAC +
Preference number: 3 (lower is better)
Translates to: SIKAIEGTNRLA*SKEQFQWRKPN
Trigger: GTTTGGCTTCCTCCACTGAAATTGCTCCTTAGACCAAGCTAGCCTGTTAGTCCCCTCGATGGCTTTAATGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTGGTTATAATGGGAGATaGGGTAAACGCCTCTATTTG +
Preference number: 3 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFGYNGR*GKRLYL
Trigger: CAAATAGAGGCGTTTACCCAATCTCCCATTATAACC...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp TCCATAGTTTCTGTGTCTGTATGTGGATTCTGTGCATaGTGCAAGCATGCGTGTGCCGGTTTGCCCATTTGT +
Preference number: 3 (lower is better)
Translates to: SIVSVSVCGFCA*CKHACAGLPIC
Trigger: ACAAATGGGCAAACCGGCACACGCATGCTTGCATCATGCACAGAATCCACATACAGACACAGAAACTATGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp ACCATAAGCCAACCCTTGGGTATCTGCACCCTGTTCTaGGTATTGGTTGTGTGGTCTTCTCCAGAAAGTTAC +
Preference number: 3 (lower is better)
Translates to: TISQPLGICTLF*VLVVWSSPESY
Trigger: GTAACTTTCTGGAGAAGACCACACAACCAATACTCAGAACAGGGTGCAGATACCCAAGGGTTGGCTTATGGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GTGAAGACAGCAATGTTCTGTCTGTGGCTGCGGATATaGAACAGATATACAGATAAGCAGCTTAGGCTGGGA +
Preference number: 3 (lower is better)
Translates to: VKTAMFCLWLRI*NRYTDKQLRLG
Trigger: TCCCAGCCTAAGCTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGTCTTCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GGGTTTTCCATATCTACAAGACCTAGAATACGGCTTTaGTCCATCAGCCCTTGTCCTCATTCCATTTGCCTG +
Preference number: 3 (lower is better)
Translates to: GFSISTRPRIRL*SISPCPHSICL
Trigger: CAGGCAAATGGAATGAGGACAAGGGCTGATGGAGCAAAGCCGTATTCTAGGTCTTGTAGATATGGAAAACCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GATGAAGATGTAGAACTCTCAGCTCCTCCTGCACCATaGCTGCCTGGATGTTGCCTTGATAATAATGAACTG +
Preference number: 3 (lower is better)
Translates to: DEDVELSAPPAP*LPGCCLDNNEL
Trigger: CAGTTCATTATTATCAAGGCAACATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GGATATGCAACAGATATACAGATAAGCAGCTTAGGCTaGGACAGAGAAGTGACGTGTGCTGGGAACTCATAC +
Preference number: 3 (lower is better)
Translates to: GYATDIQISSLG*DREVTCAGNSY
Trigger: GTATGAGTTCCCAGCACACGTCACTTCTCTGTCCCAGCCTAAGCTGCTTATCTGTATATCTGTTGCATATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp GCATTCACACCAATGCTGTTTGTCCCAGGGCTTTGCTaGAATGTGGTCTCTTTACATTCACTGAAACAGCAC +
Preference number: 3 (lower is better)
Translates to: AFTPMLFVPGLC*NVVSLHSLKQH
Trigger: GTGCTGTTTCAGTGAATGTAAAGAGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp CATAGCATGTCATGGAGGTTCTTCTACGATTCAGTGTaGCAGTTGATTTACAGGTTTCTGCTGCTCTTAGCC +
Preference number: 3 (lower is better)
Translates to: HSMSWRFFYDSV*QLIYRFLLLLA
Trigger: GGCTAAGAGCAGCAGAAACCTGTAAATCAACTGGCACACTGAATCGTAGAAGAACCTCCATGACATGCTATG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GTATTGGTTGTGTGGTCTTCTCCAGAAAGTTACCCATaGTTGCTAAAACCCTCACCAAACTGTAGAGAGAGC +
Preference number: 3 (lower is better)
Translates to: VLVVWSSPESYP*LLKPSPNCRES
Trigger: GCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAACCATGGGTAACTTTCTGGAGAAGACCACACAACCAATAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp GAACAAACATTCAAACACAGGGTGGTTAATGAAGCATaGGGCAGGGAAAACACCAGACATTATCCTCCTTGG +
Preference number: 3 (lower is better)
Translates to: EQTFKHRVVNEA*GRENTRHYPPW
Trigger: CCAAGGAGGATAATGTCTGGTGTTTTCCCTGCCCCATGCTTCATTAACCACCCTGTGTTTGAATGTTTGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp TGGTTGTTTGAGCCTGGCTTTTCCCATAGCATGTCATaGAGGTTCTTCTACGATTCAGTGTGCCAGTTGATT +
Preference number: 3 (lower is better)
Translates to: WLFEPGFSHSMS*RFFYDSVCQLI
Trigger: AATCAACTGGCACACTGAATCGTAGAAGAACCTCCATGACATGCTATGGGAAAAGCCAGGCTCAAACAACCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CAAGGGTCCACTTTCTGTGACACTGTGCATGTAGTATaGCCAAGGATATTGGGAATCAGGTTCTATCTCCAT +
Preference number: 3 (lower is better)
Translates to: QGSTFCDTVHVV*PRILGIRFYLH
Trigger: ATGGAGATAGAACCTGATTCCCAATATCCTTGGCCATACTACATGCACAGTGTCACAGAAAGTGGACCCTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGATTTGGGCAGTTTACTaGCGTTGTTTCATTTCTACA +
Preference number: 3 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLIWAVY*RCFIST
Trigger: TGTAGAAATGAAACAACGCAAGTAAACTGCCCAAAT...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CTTAATTTTCAAGTCCATAGTTTCTGTGTCTGTATGTaGATTCTGTGCATGATGCAAGCATGCGTGTGCCGG +
Preference number: 3 (lower is better)
Translates to: LNFQVHSFCVCM*ILCMMQACVCR
Trigger: CCGGCACACGCATGCTTGCATCATGCACAGAATCCACATACAGACACAGAAACTATGGACTTGAAAATTAAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAAATGCCACTTCCTATTaGCATGTCCGGGTGCTGAAT +
Preference number: 3 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSNATSY*HVRVLN
Trigger: ATTCAGCACCCGGACATGCAAATAGGAAGTGGCATT...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp TTGCTTGACATCACAGTACACCAGGCTATTCCTGGATaGTACCATCCAGAAAGACTTATTGCTGCTTTTCTC +
Preference number: 3 (lower is better)
Translates to: LLDITVHQAIPG*YHPERLIAAFL
Trigger: GAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCTGGTGTACTGTGATGTCAAGCAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp ATTCTTTATTCTGATAGTCATCTGCATTTGGAGGGCTaGCTCTCAAAGGAACCAAAACTAAAGCCTCCCACT +
Preference number: 3 (lower is better)
Translates to: ILYSDSHLHLEG*LSKEPKLKPPT
Trigger: AGTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGACTATCAGAATAAAGAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GAGGGTGAGGGAGAAGAGGATGCAGACCCTTATCTGTaGTCATGTATAGGAAAATATCCTGTTTTAGTTTGT +
Preference number: 3 (lower is better)
Translates to: EGEGEEDADPYL*SCIGKYPVLVC
Trigger: ACAAACTAAAACAGGATATTTTCCTATACATGAGCACAGATAAGGGTCTGCATCCTCTTCTCCCTCACCCTC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAATATACTTCCCATGGTaGTTTGAGCCTGGCTTTTCC +
Preference number: 3 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSIYFPW*FEPGFS
Trigger: GGAAAAGCCAGGCTCAAACAACCATGGGAAGTATAT...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCAGGAAGGTCAGCTTTCTaGTATCAGTTTCTTAGAGTC +
Preference number: 3 (lower is better)
Translates to: NKTTGAPVMIFERIIPVAGRSAF*YQFLRV
Trigger: GACTCTAAGAAACTGATACAAGAAAGCTGACCTTCC...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp CCTGGATGTTGCCTTGATAATAATGAACTGAATATCTaGACCTGTAAGGCAGGCCCAATTAAATGTTGCCCT +
Preference number: 3 (lower is better)
Translates to: PGCCLDNNELNI*TCKAGPIKCCP
Trigger: AGGGCAACATTTAATTGGGCCTGCCTTACAGGTTCAGATATTCAGTTCATTATTATCAAGGCAACATCCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp GACAACCATAAGTCAGCTTTATTCAAGTGCAGTGGGTaGTTCCTTACCAAAAGGAATAGCAAGAAGCAACTC +
Preference number: 3 (lower is better)
Translates to: DNHKSALFKCSG*FLTKRNSKKQL
Trigger: GAGTTGCTTCTTGCTATTCCTTTTGGTAAGGAATCACCCACTGCACTTGAATAAAGCTGACTTATGGTTGTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CCAAAAGGAATAGCAAGAAGCAACTCCAAAGCGCAATaGGTATCAGATACAGAAGTTCTTAGCCTTTATCCT +
Preference number: 3 (lower is better)
Translates to: PKGIARSNSKAQ*VSDTEVLSLYP
Trigger: AGGATAAAGGCTAAGAACTTCTGTATCTGATACCCATTGCGCTTTGGAGTTGCTTCTTGCTATTCCTTTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTACTAGGTTTGAGGAGTTaGTATTGTTCCCTCAAAGAT +
Preference number: 3 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLLGLRS*YCSLKD
Trigger: ATCTTTGAGGGAACAATACAAACTCCTCAAACCTAG...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCGTGCTAAGATTCTCATaGTTGGAAACTAACCTGTTG +
Preference number: 3 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFVLRFS*LETNLL
Trigger: CAACAGGTTAGTTTCCAACAATGAGAATCTTAGCAC...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp ATAACTTATTTTATCGGACAACTGACTAAGTCAGCATaGGGGAGATGCTGTACTCATAAAGCAACCTTCCTG +
Preference number: 3 (lower is better)
Translates to: ITYFIGQLTKSA*GRCCTHKATFL
Trigger: CAGGAAGGTTGCTTTATGAGTACAGCATCTCCCTCATGCTGACTTAGTCAGTTGTCCGATAAAATAAGTTAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp TGCATAAAGACTACATTCTTTATTCTGATAGTCATCTaGATTTGGAGGGCTGCCTCTCAAAGGAACCAAAAC +
Preference number: 3 (lower is better)
Translates to: CIKTTFFILIVI*IWRAASQRNQN
Trigger: GTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGACTATCAGAATAAAGAATGTAGTCTTTATGCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp GTACCACTATTTCAATGTAGCTGCCTGACGAATAACTaGAGGATTTCACAATCGTCCATGTATGAACACATT +
Preference number: 3 (lower is better)
Translates to: VPLFQCSCLTNN*RISQSSMYEHI
Trigger: AATGTGTTCATACATGGACGATTGTGAAATCCTGCAGTTATTCGTCAGGCAGCTACATTGAAATAGTGGTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp ATGGCAAAGAGGCGTGTAGAAAGTTCTCCACTTCTATaGCATCAAGAACATACAAATGAAAGGATCAATGAG +
Preference number: 3 (lower is better)
Translates to: MAKRRVESSPLL*HQEHTNERINE
Trigger: CTCATTGATCCTTTCATTTGTATGTTCTTGATGGCATAGAAGTGGAGAACTTTCTACACGCCTCTTTGCCAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR-3UTR CAA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCCTAAGATTCTCATTGTaGGAAACTAACCTGTTGCAT +
Preference number: 3 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFLRFSL*ETNLLH
Trigger: ATGCAACAGGTTAGTTTCCAACAATGAGAATCTTAG...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp ATGCTCTTAATTCCTGAAACTGTATTTTGTGTACACTaGCTTATCAGGAGAGTGAGTACCTTCAACCATTCC +
Preference number: 3 (lower is better)
Translates to: MLLIPETVFCVH*LIRRVSTFNHS
Trigger: GGAATGGTTGAAGGTACTCACTCTCCTGATAAGTCAGTGTACACAAAATACAGTTTCAGGAATTAAGAGCAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp AGGATTTCACAATCGTCCATGTATGAACACATTAAATaGCACAAATGTCACTATCTTGCTAAGGCGAAGATG +
Preference number: 3 (lower is better)
Translates to: RISQSSMYEHIK*HKCHYLAKAKM
Trigger: CATCTTCGCCTTAGCAAGATAGTGACATTTGTGGCATTTAATGTGTTCATACATGGACGATTGTGAAATCCT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp CAGGTTATAATGGGAGATTGGGTAAACGCCTCTATTTaGGCAGTTTACTTGCGTTGTTTCATTTCTACAAAT +
Preference number: 3 (lower is better)
Translates to: QVIMGDWVNASI*AVYLRCFISTN
Trigger: ATTTGTAGAAATGAAACAACGCAAGTAAACTGCCCAAATAGAGGCGTTTACCCAATCTCCCATTATAACCTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR TCA 72 bp AGCATGAAAATCACTCTCATGAAGAATTTGATTCAATaGTGTCATAAATTTACTGGGTGGATCAACCTTCAC +
Preference number: 3 (lower is better)
Translates to: SMKITLMKNLIQ*CHKFTGWINLH
Trigger: GTGAAGGTTGATCCACCCAGTAAATTTATGACATCATTGAATCAAATTCTTCATGAGAGTGATTTTCATGCT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR GCA 72 bp AGAGAAGTAACTTCATTGAGCTATTATATATGGGTATaGCCAACTATGACCTTATTAGATCCCTTACGAATT +
Preference number: 3 (lower is better)
Translates to: REVTSLSYYIWV*PTMTLLDPLRI
Trigger: AATTCGTAAGGGATCTAATAAGGTCATAGTTGGGCATACCCATATATAATAGCTCAATGAAGTTACTTCTCT
35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CCA 72 bp AATACATGTTGGGGCCTTGATACCTTTCTAGAAATTTaGAAATGTGTTGTACTGTTTAAACCAATTGTTTCC +
Preference number: 3 (lower is better)
Translates to: NTCWGLDTFLEI*KCVVLFKPIVS
Trigger: GGAAACAATTGGTTTAAACAGTACAACACATTTCCAAATTTCTAGAAAGGTATCAAGGCCCCAACATGTATT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGCGTCGTGGTCAGCCGTaGGGAGAAGCATGGACGGGT +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGRRGQP*GEAWTG
Trigger: ACCCGTCCATGCTTCTCCTCACGGCTGACCACGACG...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGTGTAGCCCACCACGCTaGCCACATCCAGGGGGAAGG +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGCSPPR*PHPGGR
Trigger: CCTTCCCCCTGGATGTGGGCAGCGTGGTGGGCTACA...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTGTCTCTCATCATGGCCTCCAGTGGGCCCTGGGCTTaGGACACAGGTCTCGCACTGCAGCAGACCCTGCGA +
Preference number: 4 (lower is better)
Translates to: LSLIMASSGPWA*DTGLALQQTLR
Trigger: TCGCAGGGTCTGCTGCAGTGCGAGACCTGTGTCCAAAGCCCAGGGCCCACTGGAGGCCATGATGAGAGACAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGCGGCCCACGATGTACTaGAGGGTGGCAATGAACTTC +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGRPTMY*RVAMNF
Trigger: GAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCG...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCATTCCCTTCCCGTCATaGGTCCAGGCCATGCAGGTG +
Preference number: 4 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSIPFPS*VQAMQV
Trigger: CACCTGCATGGCCTGGACGCATGACGGGAAGGGAAT...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTAGCAGGGGGTTGCTCTaGTTCCGGCTGCGGCCCACG +
Preference number: 4 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFSRGLL*FRLRPT
Trigger: CGTGGGCCGCAGCCGGAAGCAGAGCAACCCCCTGCT...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCACTGAAGGGTGGCAATaGACTTCAGTGAGTGCAGCG +
Preference number: 4 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSTEGWQ*TSVSAA
Trigger: CGCTGCACTCACTGAAGTTCATTGCCACCCTTCAGT...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGAGCATGGACGGGTACTaGATGTCGTCTGCCTCCGGA +
Preference number: 4 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLSMDGY*MSSASG
Trigger: TCCGGAGGCAGACGACATCCAGTACCCGTCCATGCT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp GAGGCTGCCTCTGGCTTCGATGCGCAAACACACTCCTaGTCCTTGCAGCCATGCTGTCAACAGGCTGTGATG +
Preference number: 4 (lower is better)
Translates to: EAASGFDAQTHS*SLQPCCQQAVM
Trigger: CATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGCAGCCTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp TCATCTGCATTTGGAGGGCTGCCTCTCAAAGGAACCAAAACTAAAGCCTCCCACCCCAGTCGGAGCCGCTaGCGCTCAGACCATAGGCAA +
Preference number: 4 (lower is better)
Translates to: SSAFGGLPLKGTKTKASHPSRSR*RSDHRQ
Trigger: TTGCCTATGGTCTGAGCGCCAGCGGCTCCGACTGGG...GTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGGCTTTTGGTGGAGATTaGTGGATGTCTCTGTGCCAT +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGAFGGD*WMSLCH
Trigger: ATGGCACAGAGACATCCACCAATCTCCACCAAAAGC...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCCCACAGTCGGTTTACTaGATCACATCCCTCCCAGAT +
Preference number: 4 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSPQSVY*ITSLPD
Trigger: ATCTGGGAGGGATGTGATCCAGTAAACCGACTGTGG...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTACCACGCGGTCGTCGTaGTCAGCCGTGAGGAGAAGC +
Preference number: 4 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFTTRSS*SAVRRS
Trigger: GCTTCTCCTCACGGCTGACCACGACGACCGCGTGGT...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGCTTCTTCTATCACTTTaGCGGTGGGTTTCCCGGCCC +
Preference number: 4 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLLLLSL*RWVSRP
Trigger: GGGCCGGGAAACCCACCGCCAAAGTGATAGAAGAAG...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp TGTGAGCGGAGGCACAGTGCTCACGTAGGGCAGCACTCTGCCCAGTGGTTTCTTAAAATATCTTCTGACTaGTCCGTCCCCAAGACGTGG +
Preference number: 4 (lower is better)
Translates to: CERRHSAHVGQHSAQWFLKISSD*SVPKTW
Trigger: CCACGTCTTGGGGACGGATCAGTCAGAAGATATTTT...AAGAAACCACTGGGCAGAGTGCTGCCCTACGTGAGCACTGTGCCTCCGCTCACA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGTGGTGTCCACGTGGATaGGCAGGGGGTTGCTCTGCT +
Preference number: 4 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLWCPRG*AGGCSA
Trigger: AGCAGAGCAACCCCCTGCTCATCCACGTGGACACCA...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGAAGATACCACCTTTGTaGCACGTCTCTCCGTATTCA +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGKIPPL*HVSPYS
Trigger: TGAATACGGAGAGACGTGGCACAAAGGTGGTATCTT...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGGATGTTCAGGCACCGTaGTATGAACGCAAACATATC +
Preference number: 4 (lower is better)
Translates to: GEMARQLGTLAALPEEPGDVQAP*YERKHI
Trigger: GATATGTTTGCGTTCATAGCACGGTGCCTGAACATC...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp TCATCTGCATTTGGAGGGCTGCCTCTCAAAGGAACCAAAACTAAAGCCTCCCACGCCTTGGTGTCCACGTaGATGAGCAGGGGGTTGCTC +
Preference number: 4 (lower is better)
Translates to: SSAFGGLPLKGTKTKASHALVST*MSRGLL
Trigger: GAGCAACCCCCTGCTCATCCACGTGGACACCAAGGC...GTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CCCATGCCTTTCTCTGTCCCCACCCACCTTACTGCCTaGAGACACTGTCTCTCAATGAACCAGAAGCTCACC +
Preference number: 4 (lower is better)
Translates to: PMPFSVPTHLTA*RHCLSMNQKLT
Trigger: GGTGAGCTTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAGAAAGGCATGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp GCCTCTGGCTTCGATGCGCAAACACACTCCTTGTCCTaGCAGCCATGCTGTCAACAGGCTGTGATGAAGGTT +
Preference number: 4 (lower is better)
Translates to: ASGFDAQTHSLS*QPCCQQAVMKV
Trigger: AACCTTCATCACAGCCTGTTGACAGCATGGCTGCAAGGACAAGGAGTGTGTTTGCGCATCGAAGCCAGAGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TTAGGCTGGGCAGGCTCAGGGGCAAGCGAGTCAGATTaGGCTAAACAACATAGGTTGCACCCCAATTTGCCC +
Preference number: 4 (lower is better)
Translates to: LGWAGSGASESD*AKQHRLHPNLP
Trigger: GGGCAAATTGGGGTGCAACCTATGTTGTTTAGCCAAATCTGACTCGCTTGCCCCTGAGCCTGCCCAGCCTAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGATGAACTTCAGTGAGTaGAGCGGGACCACGCGGTCG +
Preference number: 4 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLMNFSE*SGTTRS
Trigger: CGACCGCGTGGTCCCGCTGCACTCACTGAAGTTCAT...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCGGTTTCCCGGCCCCGTaGCCGGCCTTGGTGTCCACG +
Preference number: 4 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFGFPAP*PALVST
Trigger: CGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACC...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTCCCTTTTGCCATGTGGGTGCTGAACTCTACTGGCTaGGTGGCAGGTGCTCTGACCACTAATTACTGCTCA +
Preference number: 4 (lower is better)
Translates to: LPFAMWVLNSTG*VAGALTTNYCS
Trigger: TGAGCAGTAATTAGTGGTCAGAGCACCTGCCACCAAGCCAGTAGAGTTCAGCACCCACATGGCAAAAGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGTCTCAGAGTCCTTCTTaGGCCCACTGTAGCCCACCA +
Preference number: 4 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLSQSPS*AHCSPP
Trigger: TGGTGGGCTACAGTGGGCGCAAGAAGGACTCTGAGA...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGCTATCACTTTGGCGGTaGGTTTCCCGGCCCCGTGGC +
Preference number: 4 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQLSLWR*VSRPRG
Trigger: GCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAG...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGACACAAAATATCTTCTaGCTGATCCGTCCCCAAGAC +
Preference number: 4 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLTQNIF*LIRPQD
Trigger: GTCTTGGGGACGGATCAGTCAGAAGATATTTTGTGT...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGCCAGGGGGAAGGTCTTaGGGAGAGCACCAGTCGTCA +
Preference number: 4 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQPGGRS*GEHQSS
Trigger: TGACGACTGGTGCTCTCCTCAAGACCTTCCCCCTGG...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp GTGAGGCCTTGTATGAATAGGCGTGTCACTGTGGGCTaGGGTTTTACAACCCTCATCCTAACTGCCTGGAAG +
Preference number: 4 (lower is better)
Translates to: VRPCMNRRVTVG*GFTTLILTAWK
Trigger: CTTCCAGGCAGTTAGGATGAGGGTTGTAAAACCCAAGCCCACAGTGACACGCCTATTCATACAAGGCCTCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp CTCTGTCCCCACCCACCTTACTGCCTTGAGACACTGTCTCTCAATGAACCAGAAGTCCTGCTGCGGGTATaGGTTATAGAACATTCCCTT +
Preference number: 4 (lower is better)
Translates to: LCPHPPYCLETLSLNEPEVLLRV*VIEHSL
Trigger: AAGGGAATGTTCTATAACTCATACCCGCAGCAGGAC...TTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTCCAGTCGTCAGGTCGTaGAGCTGTAGAATGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFPVVRS*SCRMFF
Trigger: GAAGAACATTCTACAGCTTCACGACCTGACGACTGG...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp GCTGGTGTCCGTAGTCTGAATTCCTTCATCTTCGTGGGCACTGTCTCCACCCTGGTAGTGGCGAGTATTTaGGAAGCCATTCAAAGTGTT +
Preference number: 4 (lower is better)
Translates to: AGVRSLNSFIFVGTVSTLVVASI*EAIQSV
Trigger: AACACTTTGAATGGCTTCTCAAATACTCGCCACTAC...CAGGGTGGAGACAGTGCCCACGAAGATGAAGGAATTCAGACTACGGACACCAGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGTTTGGTGGAGATTGGTaGATGTCTCTGTGCCATCGC +
Preference number: 4 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLFGGDW*MSLCHR
Trigger: GCGATGGCACAGAGACATCCACCAATCTCCACCAAA...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp TTTGGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTCCATTGGGTTCTTGCTaGAGGTCACAGTACCACAGT +
Preference number: 4 (lower is better)
Translates to: FGVTSQSHSSGFSWVHSTPLGSC*RSQYHS
Trigger: ACTGTGGTACTGTGACCTCCAGCAAGAACCCAATGG...AGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TTCCTGCCTCCAGCTCTGCATTCACACCAATGCTGTTaGTCCCAGGGCTTTGCTGAAATGTGGTCTCTTTAC +
Preference number: 4 (lower is better)
Translates to: FLPPALHSHQCC*SQGFAEMWSLY
Trigger: GTAAAGAGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAGCTGGAGGCAGGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTACTTATGGCTGGTTCAGGCTGCATCCTGGGGCTCTaGACTTGTGCTGTAGCTAGGGACAGACAAAAACAT +
Preference number: 4 (lower is better)
Translates to: LLMAGSGCILGL*TCAVARDRQKH
Trigger: ATGTTTTTGTCTGTCCCTAGCTACAGCACAAGTCAAGAGCCCCAGGATGCAGCCTGAACCAGCCATAAGTAG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp CTCTGTCCCCACCCACCTTACTGCCTTGAGACACTGTCTCTCAATGAACCAGAATATGTCTCACAAAAATaGGCCTGGACACGCTGTAGT +
Preference number: 4 (lower is better)
Translates to: LCPHPPYCLETLSLNEPEYVSQK*AWTRCS
Trigger: ACTACAGCGTGTCCAGGCTCATTTTTGTGAGACATA...TTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCATGCTCTGCTTCCGGCTaGGGCCCACGATGTACTGAA +
Preference number: 4 (lower is better)
Translates to: NKTTGAPVMIFERIIPVACSASG*GPRCTE
Trigger: TTCAGTACATCGTGGGCCGCAGCCGGAAGCAGAGCA...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCAGGTCCAGGAACACTCTaGCCTCCCCCTCTAAGGAGT +
Preference number: 4 (lower is better)
Translates to: NKTTGAPVMIFERIIPVAGPGTL*PPPLRS
Trigger: ACTCCTTAGAGGGGGAGGCCAGAGTGTTCCTGGACC...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTAAGGAGCAATTTCAGTGGAGGAAGCCAAACAGCTTaGTCCCGGGTAGTGAACACTAACGTAAGGACTCCT +
Preference number: 4 (lower is better)
Translates to: LRSNFSGGSQTA*SRVVNTNVRTP
Trigger: AGGAGTCCTTACGTTAGTGTTCACTACCCGGGACAAAGCTGTTTGGCTTCCTCCACTGAAATTGCTCCTTAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp TCATCTGCATTTGGAGGGCTGCCTCTCAAAGGAACCAAAACTAAAGCCTCCCACCAAATTTTATGTCCATaGTACTCCTGCACGGAGGTC +
Preference number: 4 (lower is better)
Translates to: SSAFGGLPLKGTKTKASHQILCP*YSCTEV
Trigger: GACCTCCGTGCAGGAGTATCATGGACATAAAATTTG...GTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGCCTCTCGGAAAACCATaGGCTCCAGTTCCTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQPLGKP*APVPLW
Trigger: CCAAAGAGGAACTGGAGCCCATGGTTTTCCGAGAGG...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp CTCTGTCCCCACCCACCTTACTGCCTTGAGACACTGTCTCTCAATGAACCAGAATACTCAGCAGCACACTaGAAGTCATCAAAACAGTTC +
Preference number: 4 (lower is better)
Translates to: LCPHPPYCLETLSLNEPEYSAAH*KSSKQF
Trigger: GAACTGTTTTGATGACTTCCAGTGTGCTGCTGAGTA...TTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCACCAGGAAGTTGGACCTaGCACAAGCCACCCATTCTA +
Preference number: 4 (lower is better)
Translates to: NKTTGAPVMIFERIIPVAPGSWT*HKPPIL
Trigger: TAGAATGGGTGGCTTGTGTCAGGTCCAACTTCCTGG...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGGATCGCAGTGGTAAATaGCACCTGGAGATAGGAAGG +
Preference number: 4 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQDRSGK*HLEIGR
Trigger: CCTTCCTATCTCCAGGTGTCATTTACCACTGCGATC...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTCCTCTGATTGGACATTaGTCAAGAAATGGCACAGTA +
Preference number: 4 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFPLIGH*SRNGTV
Trigger: TACTGTGCCATTTCTTGAGCAATGTCCAATCAGAGG...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTATGGTGGATGTCTCTGTaGCATCGCTCTTCCCGTCCT +
Preference number: 4 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLWWMSL*HRSSRP
Trigger: AGGACGGGAAGAGCGATGGCACAGAGACATCCACCA...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTACACATCCCTCCCAGATaGATAACAAGACGTACCGGC +
Preference number: 4 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLHIPPR*ITRRTG
Trigger: GCCGGTACGTCTTGTTATCCATCTGGGAGGGATGTG...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTAACGAAAGCCTTAGTCTaGTCGCTGTCTGGGTCTTCA +
Preference number: 4 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLTKALV*SLSGSS
Trigger: TGAAGACCCAGACAGCGAGCAGACTAAGGCTTTCGT...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp ATTGCAGTGGAGACTCCCTTGAGGTCTCCCATTTATTTAAGTTTATATGCTATGCATCCGACAGTGTGTTaGGGTCCAGGAACACTCTGG +
Preference number: 4 (lower is better)
Translates to: IAVETPLRSPIYLSLYAMHPTVC*GPGTLW
Trigger: CCAGAGTGTTCCTGGACCCCAACACACTGTCGGATG...CATAGCATATAAACTTAAATAAATGGGAGACCTCAAGGGAGTCTCCACTGCAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TTGGTTGTGTGGTCTTCTCCAGAAAGTTACCCATGGTaGCTAAAACCCTCACCAAACTGTAGAGAGAGCTTG +
Preference number: 4 (lower is better)
Translates to: LVVWSSPESYPW*LKPSPNCRESL
Trigger: CAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAACCATGGGTAACTTTCTGGAGAAGACCACACAACCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp AATACACAAGCTTCTATCTCAGCTGCTCCCTGTCTTTaGTCTCTCTTGCTTGACATCACAGTACACCAGGCT +
Preference number: 4 (lower is better)
Translates to: NTQASISAAPCL*SLLLDITVHQA
Trigger: AGCCTGGTGTACTGTGATGTCAAGCAAGAGAGACAAAAGACAGGGAGCAGCTGAGATAGAAGCTTGTGTATT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp TCATCTGCATTTGGAGGGCTGCCTCTCAAAGGAACCAAAACTAAAGCCTCCCACCCGATAGTAAATTTGTaGAACTTCAACATGTCCATC +
Preference number: 4 (lower is better)
Translates to: SSAFGGLPLKGTKTKASHPIVNL*NFNMSI
Trigger: GATGGACATGTTGAAGTTCCACAAATTTACTATCGG...GTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTCTGCATTCACACCAATGCTGTTTGTCCCAGGGCTTaGCTGAAATGTGGTCTCTTTACATTCACTGAAACA +
Preference number: 4 (lower is better)
Translates to: LCIHTNAVCPRA*LKCGLFTFTET
Trigger: TGTTTCAGTGAATGTAAAGAGACCACATTTCAGCAAAGCCCTGGGACAAACAGCATTGGTGTGAATGCAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp ATTGCAGTGGAGACTCCCTTGAGGTCTCCCATTTATTTAAGTTTATATGCTATGACCGCTTTCCTTTCTTaGAGTGGCAGCTGTACTTGG +
Preference number: 4 (lower is better)
Translates to: IAVETPLRSPIYLSLYAMTAFLS*SGSCTW
Trigger: CCAAGTACAGCTGCCACTTCAAGAAAGGAAAGCGGT...CATAGCATATAAACTTAAATAAATGGGAGACCTCAAGGGAGTCTCCACTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAAGTCTGCTCGCTGTCTaGGTCTTCAAGCCAAGAATA +
Preference number: 4 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSSLLAV*VFKPRI
Trigger: TATTCTTGGCTTGAAGACCCAGACAGCGAGCAGACT...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp ATTGCAGTGGAGACTCCCTTGAGGTCTCCCATTTATTTAAGTTTATATGCTATGTCCATCACTCCAACCTaGGCAATAACACAGCCGAAG +
Preference number: 4 (lower is better)
Translates to: IAVETPLRSPIYLSLYAMSITPT*AITQPK
Trigger: CTTCGGCTGTGTTATTGCCCAGGTTGGAGTGATGGA...CATAGCATATAAACTTAAATAAATGGGAGACCTCAAGGGAGTCTCCACTGCAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TGTATGAACACATTAAATGCCACAAATGTCACTATCTaGCTAAGGCGAAGATGCTCTGAGGGCATGGCATCT +
Preference number: 4 (lower is better)
Translates to: CMNTLNATNVTI*LRRRCSEGMAS
Trigger: AGATGCCATGCCCTCAGAGCATCTTCGCCTTAGCAAGATAGTGACATTTGTGGCATTTAATGTGTTCATACA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TGGTTGCTAAAACCCTCACCAAACTGTAGAGAGAGCTaGTTGTCACGGTTGCTTTTCAAACTAGTACCACTA +
Preference number: 4 (lower is better)
Translates to: WLLKPSPNCRES*LSRLLFKLVPL
Trigger: TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAACCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp ACATTTCATGTAGTGGAATATACTTCCCATGGTTGTTaGAGCCTGGCTTTTCCCATAGCATGTCATGGAGGT +
Preference number: 4 (lower is better)
Translates to: TFHVVEYTSHGC*SLAFPIACHGG
Trigger: ACCTCCATGACATGCTATGGGAAAAGCCAGGCTCAAACAACCATGGGAAGTATATTCCACTACATGAAATGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CAATGCCACTTCCTATTTGCATGTCCGGGTGCTGAATaGACTTCTAGTCTTTCCCTGGAACTTATTTATGCT +
Preference number: 4 (lower is better)
Translates to: QCHFLFACPGAE*TSSLSLELIYA
Trigger: AGCATAAATAAGTTCCAGGGAAAGACTAGAAGTCAATTCAGCACCCGGACATGCAAATAGGAAGTGGCATTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTATCAGTGGTCCATGCATaGCCGATAGTAAATTTGTGG +
Preference number: 4 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLSVVHA*PIVNLW
Trigger: CCACAAATTTACTATCGGCCATGCATGGACCACTGA...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TATACAACACCATCTTCTTTCTCCATCCTTTCTCTATaGTGTCCTCCTCTGTTCCCAGTGACCACTGTTTTA +
Preference number: 4 (lower is better)
Translates to: YTTPSSFSILSL*CPPLFPVTTVL
Trigger: TAAAACAGTGGTCACTGGGAACAGAGGAGGACACAATAGAGAAAGGATGGAGAAAGAAGATGGTGTTGTATA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR GCA 90 bp CCAAACTGTAGAGAGAGCTTGTTGTCACGGTTGCTTTTCAAACTAGTACCACTAGTAATCAGTGGTCCATaGATGGCCGATAGTAAATTT +
Preference number: 4 (lower is better)
Translates to: PNCRESLLSRLLFKLVPLVISGP*MADSKF
Trigger: AAATTTACTATCGGCCATGCATGGACCACTGATTAC...TAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR TCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCCCTTGTATAAACCTCTaGTTGGACATTGCTCAAGAA +
Preference number: 4 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFPCINL*LDIAQE
Trigger: TTCTTGAGCAATGTCCAATCAGAGGTTTATACAAGG...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CCA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCACATATAACACGCGTTaGTTCTGCAAACCTGTATTG +
Preference number: 4 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFTYNTR*FCKPVL
Trigger: CAATACAGGTTTGCAGAACCAACGCGTGTTATATGT...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CTCCGCCTCTTTTCAGTGGTGCTAAGATTCTCATTGTaGGAAACTAACCTGTTGCATAAAGACTACATTCTT +
Preference number: 4 (lower is better)
Translates to: LRLFSVVLRFSL*ETNLLHKDYIL
Trigger: AAGAATGTAGTCTTTATGCAACAGGTTAGTTTCCAACAATGAGAATCTTAGCACCACTGAAAAGAGGCGGAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp AGACTCCGCCTCTTTTCAGTGGTGCTAAGATTCTCATaGTTGGAAACTAACCTGTTGCATAAAGACTACATT +
Preference number: 4 (lower is better)
Translates to: RLRLFSVVLRFS*LETNLLHKDYI
Trigger: AATGTAGTCTTTATGCAACAGGTTAGTTTCCAACAATGAGAATCTTAGCACCACTGAAAAGAGGCGGAGTCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp CCAGGTTATAATGGGAGATTGGGTAAACGCCTCTATTaGGGCAGTTTACTTGCGTTGTTTCATTTCTACAAA +
Preference number: 4 (lower is better)
Translates to: PGYNGRLGKRLY*GSLLALFHFYK
Trigger: TTTGTAGAAATGAAACAACGCAAGTAAACTGCCCAAATAGAGGCGTTTACCCAATCTCCCATTATAACCTGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TTGCTAAAACCCTCACCAAACTGTAGAGAGAGCTTGTaGTCACGGTTGCTTTTCAAACTAGTACCACTATTT +
Preference number: 4 (lower is better)
Translates to: LLKPSPNCRESL*SRLLFKLVPLF
Trigger: AAATAGTGGTACTAGTTTGAAAAGCAACCGTGACAACAAGCTCTCTCTACAGTTTGGTGAGGGTTTTAGCAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp AATGTGGTCTCTTTACATTCACTGAAACAGCACTTCTaGTTATCAACTGTTCATCTGTCCGGACTTGTCTCT +
Preference number: 4 (lower is better)
Translates to: NVVSLHSLKQHF*LSTVHLSGLVS
Trigger: AGAGACAAGTCCGGACAGATGAACAGTTGATAACAAGAAGTGCTGTTTCAGTGAATGTAAAGAGACCACATT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
3UTR CAA 72 bp TTGGGTAAACGCCTCTATTTGGGCAGTTTACTTGCGTaGTTTCATTTCTACAAATACTCTGTAACCAAGTCA +
Preference number: 4 (lower is better)
Translates to: LGKRLYLGSLLA*FHFYKYSVTKS
Trigger: TGACTTGGTTACAGAGTATTTGTAGAAATGAAACAACGCAAGTAAACTGCCCAAATAGAGGCGTTTACCCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp TTGGCGGTGGGTTTCCCGGCCCCGTGGCCGGCCTTGGTGTCCACGTaGATGAGCAGGGGGTTGCTCTGCTTCCGGCTGCGGCCCACGATG +
Preference number: 5 (lower is better)
Translates to: LAVGFPAPWPALVST*MSRGLLCFRLRPTM
Trigger: CATCGTGGGCCGCAGCCGGAAGCAGAGCAACCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAA
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp CGGTGGGTTTCCCGGCCCCGTGGCCGGCCTTGGTGTCCACGTGGATaGGCAGGGGGTTGCTCTGCTTCCGGCTGCGGCCCACGATGTACT +
Preference number: 5 (lower is better)
Translates to: RWVSRPRGRPWCPRG*AGGCSASGCGPRCT
Trigger: AGTACATCGTGGGCCGCAGCCGGAAGCAGAGCAACCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp TCCGAGACTTCTTCTATCACTTTGGCGGTGGGTTTCCCGGCCCCGTaGCCGGCCTTGGTGTCCACGTGGATGAGCAGGGGGTTGCTCTGC +
Preference number: 5 (lower is better)
Translates to: SETSSITLAVGFPAP*PALVSTWMSRGLLC
Trigger: GCAGAGCAACCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAGAAGAAGTCTCGGA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp ACTTCAGTGAGTGCAGCGGGACCACGCGGTCGTCGTGGTCAGCCGTaGGGAGAAGCATGGACGGGTACTGGATGTCGTCTGCCTCCGGAA +
Preference number: 5 (lower is better)
Translates to: TSVSAAGPRGRRGQP*GEAWTGTGCRLPPE
Trigger: TTCCGGAGGCAGACGACATCCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGACGACCGCGTGGTCCCGCTGCACTCACTGAAGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp TGCTCTGCTTCCGGCTGCGGCCCACGATGTACTGAAGGGTGGCAATaGACTTCAGTGAGTGCAGCGGGACCACGCGGTCGTCGTGGTCAG +
Preference number: 5 (lower is better)
Translates to: CSASGCGPRCTEGWQ*TSVSAAGPRGRRGQ
Trigger: CTGACCACGACGACCGCGTGGTCCCGCTGCACTCACTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCCGGAAGCAGAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp ATGAGCAGGGGGTTGCTCTGCTTCCGGCTGCGGCCCACGATGTACTaGAGGGTGGCAATGAACTTCAGTGAGTGCAGCGGGACCACGCGG +
Preference number: 5 (lower is better)
Translates to: MSRGLLCFRLRPTMY*RVAMNFSECSGTTR
Trigger: CCGCGTGGTCCCGCTGCACTCACTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCCGGAAGCAGAGCAACCCCCTGCTCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp ACGCGGTCGTCGTGGTCAGCCGTGAGGAGAAGCATGGACGGGTACTaGATGTCGTCTGCCTCCGGAAGCTTCACATTGTGTAGTGGCGAG +
Preference number: 5 (lower is better)
Translates to: TRSSWSAVRRSMDGY*MSSASGSFTLCSGE
Trigger: CTCGCCACTACACAATGTGAAGCTTCCGGAGGCAGACGACATCCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGACGACCGCGT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp GTGGCAATGAACTTCAGTGAGTGCAGCGGGACCACGCGGTCGTCGTaGTCAGCCGTGAGGAGAAGCATGGACGGGTACTGGATGTCGTCT +
Preference number: 5 (lower is better)
Translates to: VAMNFSECSGTTRSS*SAVRRSMDGYWMSS
Trigger: AGACGACATCCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGACGACCGCGTGGTCCCGCTGCACTCACTGAAGTTCATTGCCAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCACTAAGAGGCCGCCGTaGGAGCCTCCGTTGATCGTG +
Preference number: 5 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSTKRPP*EPPLIV
Trigger: CACGATCAACGGAGGCTCCAACGGCGGCCTCTTAGT...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp GCCCACTGTAGCCCACCACGCTGCCCACATCCAGGGGGAAGGTCTTaGGGAGAGCACCAGTCGTCAGGTCGTGAAGCTGTAGAATGTTCT +
Preference number: 5 (lower is better)
Translates to: AHCSPPRCPHPGGRS*GEHQSSGREAVECS
Trigger: AGAACATTCTACAGCTTCACGACCTGACGACTGGTGCTCTCCTCAAGACCTTCCCCCTGGATGTGGGCAGCGTGGTGGGCTACAGTGGGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp ATCACTCCAACCTGGGCAATAACACAGCCGAAGAGGTCTGGACGCTaGTTTGCGCAAGCAGCTACTAAGAGGCCGCCGTTGGAGCCTCCG +
Preference number: 5 (lower is better)
Translates to: ITPTWAITQPKRSGR*FAQAATKRPPLEPP
Trigger: CGGAGGCTCCAACGGCGGCCTCTTAGTAGCTGCTTGCGCAAATCAGCGTCCAGACCTCTTCGGCTGTGTTATTGCCCAGGTTGGAGTGAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp GATCCGTCCCCAAGACGTGGTAGCAGAGCTTTTGGTGGAGATTGGTaGATGTCTCTGTGCCATCGCTCTTCCCGTCCTGCTGCGGGTATG +
Preference number: 5 (lower is better)
Translates to: DPSPRRGSRAFGGDW*MSLCHRSSRPAAGM
Trigger: CATACCCGCAGCAGGACGGGAAGAGCGATGGCACAGAGACATCCACCAATCTCCACCAAAAGCTCTGCTACCACGTCTTGGGGACGGATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp ACTGATCCGTCCCCAAGACGTGGTAGCAGAGCTTTTGGTGGAGATTaGTGGATGTCTCTGTGCCATCGCTCTTCCCGTCCTGCTGCGGGT +
Preference number: 5 (lower is better)
Translates to: TDPSPRRGSRAFGGD*WMSLCHRSSRPAAG
Trigger: ACCCGCAGCAGGACGGGAAGAGCGATGGCACAGAGACATCCACCAATCTCCACCAAAAGCTCTGCTACCACGTCTTGGGGACGGATCAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp GGTGGATGTCTCTGTGCCATCGCTCTTCCCGTCCTGCTGCGGGTATaGGTTATAGAACATTCCCTTCCCGTCATGCGTCCAGGCCATGCA +
Preference number: 5 (lower is better)
Translates to: GGCLCAIALPVLLRV*VIEHSLPVMRPGHA
Trigger: TGCATGGCCTGGACGCATGACGGGAAGGGAATGTTCTATAACTCATACCCGCAGCAGGACGGGAAGAGCGATGGCACAGAGACATCCACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp AGGCATAACCTCGGAGTGCCACTGTACCATCATCCGACAGTGTGTTaGGGTCCAGGAACACTCTGGCCTCCCCCTCTAAGGAGTCTTGCA +
Preference number: 5 (lower is better)
Translates to: RHNLGVPLYHHPTVC*GPGTLWPPPLRSLA
Trigger: TGCAAGACTCCTTAGAGGGGGAGGCCAGAGTGTTCCTGGACCCCAACACACTGTCGGATGATGGTACAGTGGCACTCCGAGGTTATGCCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp TCATCTGCATTTGGAGGGCTGCCTCTCAAAGGAACCAAAACTAAAGCCTCCCACTGGATGAGCAGGGGGTaGCTCTGCTTCCGGCTGCGG +
Preference number: 5 (lower is better)
Translates to: SSAFGGLPLKGTKTKASHWMSRG*LCFRLR
Trigger: CCGCAGCCGGAAGCAGAGCAACCCCCTGCTCATCCA...GTGGGAGGCTTTAGTTTTGGTTCCTTTGAGAGGCAGCCCTCCAAATGCAGATGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp GGAGAGATGGCTCGGCAGTTAGGAACACTGGCTGCTCTTCCAGAGGAGCCAGGGTACCGCTTTCCTTTCTaGAAGTGGCAGCTGTACTTG +
Preference number: 5 (lower is better)
Translates to: GEMARQLGTLAALPEEPGYRFPF*KWQLYL
Trigger: CAAGTACAGCTGCCACTTCAAGAAAGGAAAGCGGTA...CCCTGGCTCCTCTGGAAGAGCAGCCAGTGTTCCTAACTGCCGAGCCATCTCTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp AGTCACTCTGATGCACATAGCCCTGCCTACTGCTCCTGCTCTGAGGACCGGAGCGAATTGCGGTTCGTCTaGAATGTGAACACTGTGCCC +
Preference number: 5 (lower is better)
Translates to: SHSDAHSPAYCSCSEDRSELRFV*NVNTVP
Trigger: GGGCACAGTGTTCACATTCAAGACGAACCGCAATTC...GCTCCGGTCCTCAGAGCAGGAGCAGTAGGCAGGGCTATGTGCATCAGAGTGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp CCACTGTACCATCATCCGACAGTGTGTTGGGGTCCAGGAACACTCTaGCCTCCCCCTCTAAGGAGTCTTGCACATATAACACGCGTTGGT +
Preference number: 5 (lower is better)
Translates to: PLYHHPTVCWGPGTL*PPPLRSLAHITRVG
Trigger: ACCAACGCGTGTTATATGTGCAAGACTCCTTAGAGGGGGAGGCCAGAGTGTTCCTGGACCCCAACACACTGTCGGATGATGGTACAGTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp GGTCACAGTACCACAGTCGGTTTACTGGATCACATCCCTCCCAGATaGATAACAAGACGTACCGGCCATCGTCGGATAGCTCAGCTCCTC +
Preference number: 5 (lower is better)
Translates to: GHSTTVGLLDHIPPR*ITRRTGHRRIAQLL
Trigger: GAGGAGCTGAGCTATCCGACGATGGCCGGTACGTCTTGTTATCCATCTGGGAGGGATGTGATCCAGTAAACCGACTGTGGTACTGTGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp AATAAGACAACAGGAGCCCCTGTCATGATCTTTGAAAGGATTATACCTGTGGCAGCCCCGTGGCCGGCCTaGGTGTCCACGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: NKTTGAPVMIFERIIPVAAPWPA*VSTWMS
Trigger: GCTCATCCACGTGGACACCAAGGCCGGCCACGGGGC...TGCCACAGGTATAATCCTTTCAAAGATCATGACAGGGGCTCCTGTTGTCTTATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp GTTAGGATTACCTGCTCTAAGTGGCCTTCTTGCTTTACCCTGGCTCCTTTGGGGTCGACCTTCATGAACTaGATCGTCACCCAGTCGGAG +
Preference number: 5 (lower is better)
Translates to: VRITCSKWPSCFTLAPLGSTFMN*IVTQSE
Trigger: CTCCGACTGGGTGACGATCAAGTTCATGAAGGTCGA...CCCCAAAGGAGCCAGGGTAAAGCAAGAAGGCCACTTAGAGCAGGTAATCCTAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 90 bp TGTTCTTCACGTCATGGAGGTAGCACAAGACCAGGAAGTTGGACCTaGCACAAGCCACCCATTCTAAGACATCCTTCTCGTGCTCCGGTA +
Preference number: 5 (lower is better)
Translates to: CSSRHGGSTRPGSWT*HKPPILRHPSRAPV
Trigger: TACCGGAGCACGAGAAGGATGTCTTAGAATGGGTGGCTTGTGTCAGGTCCAACTTCCTGGTCTTGTGCTACCTCCATGACGTGAAGAACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 90 bp ATAGGCAAAGTATTCGCCATCTTCACTGAAGGCATAACCTCGGAGTaGCACTGTACCATCATCCGACAGTGTGTTGGGGTCCAGGAACAC +
Preference number: 5 (lower is better)
Translates to: IGKVFAIFTEGITSE*HCTIIRQCVGVQEH
Trigger: GTGTTCCTGGACCCCAACACACTGTCGGATGATGGTACAGTGGCACTCCGAGGTTATGCCTTCAGTGAAGATGGCGAATACTTTGCCTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp GGGGTCACTTCTCAGTCCCACTCCAGTGGTTTCTCATGGGTTCACTCTACTTTTAGCTTTTGGTGGAGATaGGTGGATGTCTCTGTGCCA +
Preference number: 5 (lower is better)
Translates to: GVTSQSHSSGFSWVHSTFSFWWR*VDVSVP
Trigger: TGGCACAGAGACATCCACCAATCTCCACCAAAAGCT...AAAAGTAGAGTGAACCCATGAGAAACCACTGGAGTGGGACTGAGAAGTGACCCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGGATACCATTGGGTTCTaGCTGGAGGTCACAGTACCA +
Preference number: 5 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLDTIGF*LEVTVP
Trigger: TGGTACTGTGACCTCCAGCAAGAACCCAATGGTATC...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CTCTGTCCCCACCCACCTTACTGCCTTGAGACACTGTCTCTCAATGAACCAGAAATAAACATGGGAATCTaGGTGCCATCCTTGCTAGGG +
Preference number: 5 (lower is better)
Translates to: LCPHPPYCLETLSLNEPEINMGI*VPSLLG
Trigger: CCCTAGCAAGGATGGCACCAAGATTCCCATGTTTAT...TTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CTCTGTCCCCACCCACCTTACTGCCTTGAGACACTGTCTCTCAATGAACCAGAAAAGCCATTCAAAGTGTaGTTTAGTGTCGGAGCACCC +
Preference number: 5 (lower is better)
Translates to: LCPHPPYCLETLSLNEPEKPFKV*FSVGAP
Trigger: GGGTGCTCCGACACTAAACAACACTTTGAATGGCTT...TTCTGGTTCATTGAGAGACAGTGTCTCAAGGCAGTAAGGTGGGTGGGGACAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGCACAAGACCAGGAAGTaGGACCTGACACAAGCCACC +
Preference number: 5 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQHKTRK*DLTQAT
Trigger: GGTGGCTTGTGTCAGGTCCAACTTCCTGGTCTTGTG...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp TCTGTACAGTGTGATTGCATTCCTGGGAACGTAACCTGGGAGGGACAAAGCTTGTCAAAACAGTTCTGTTaGTTGGCCAAGATACCACCT +
Preference number: 5 (lower is better)
Translates to: SVQCDCIPGNVTWEGQSLSKQFC*LAKIPP
Trigger: AGGTGGTATCTTGGCCAACAAACAGAACTGTTTTGA...CAAGCTTTGTCCCTCCCAGGTTACGTTCCCAGGAATGCAATCACACTGTACAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 90 bp AATCTTGTTTTGTGCCTCCACGAAAGCCTTAGTCTGCTCGCTGTCTaGGTCTTCAAGCCAAGAATACGGGTCACAAATTTTATGTCCATG +
Preference number: 5 (lower is better)
Translates to: NLVLCLHESLSLLAV*VFKPRIRVTNFMSM
Trigger: CATGGACATAAAATTTGTGACCCGTATTCTTGGCTTGAAGACCCAGACAGCGAGCAGACTAAGGCTTTCGTGGAGGCACAAAACAAGATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp ATTGCAGTGGAGACTCCCTTGAGGTCTCCCATTTATTTAAGTTTATATGCTATGTCATCCGACAGTGTGTaGGGGTCCAGGAACACTCTG +
Preference number: 5 (lower is better)
Translates to: IAVETPLRSPIYLSLYAMSSDSV*GSRNTL
Trigger: CAGAGTGTTCCTGGACCCCAACACACTGTCGGATGA...CATAGCATATAAACTTAAATAAATGGGAGACCTCAAGGGAGTCTCCACTGCAAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 90 bp TTCAAAGTGTTGTTTAGTGTCGGAGCACCCGTAATCAGTGGTCCATaGATGGCCGATAGTAAATTTGTGGAACTTCAACATGTCCATCAC +
Preference number: 5 (lower is better)
Translates to: FKVLFSVGAPVISGP*MADSKFVELQHVHH
Trigger: GTGATGGACATGTTGAAGTTCCACAAATTTACTATCGGCCATGCATGGACCACTGATTACGGGTGCTCCGACACTAAACAACACTTTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAGTGGTAGCAGAGCTTTaGGTGGAGATTGGTGGATGT +
Preference number: 5 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSVVAEL*VEIGGC
Trigger: ACATCCACCAATCTCCACCAAAAGCTCTGCTACCAC...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCACACAGTAATCTTGTTTaGTGCCTCCACGAAAGCCTT +
Preference number: 5 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSHSNLV*CLHESL
Trigger: AAGGCTTTCGTGGAGGCACAAAACAAGATTACTGTG...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp ACAGCAATGTTCTGTCTGTGGCTGCGGATATGCAACAGATATACAGATAAGCAGTCAGTCATTCTCTCCTaGTATAAACCTCTGATTGGA +
Preference number: 5 (lower is better)
Translates to: TAMFCLWLRICNRYTDKQSVILS*YKPLIG
Trigger: TCCAATCAGAGGTTTATACAAGGAGAGAATGACTGA...CTGCTTATCTGTATATCTGTTGCATATCCGCAGCCACAGACAGAACATTGCTGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCAAATGGCACAGTAATCTaGTTTTGTGCCTCCACGAAA +
Preference number: 5 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSNGTVI*FCASTK
Trigger: TTTCGTGGAGGCACAAAACAAGATTACTGTGCCATT...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp AGGCTATTCCTGGATGATACCATCCAGAAAGACTTATTGCTGCTTTTCTCTTTCGGTAGAAAATCTGGATaGTCTGGTAATCAGCAGCAT +
Preference number: 5 (lower is better)
Translates to: RLFLDDTIQKDLLLLFSFGRKSG*SGNQQH
Trigger: ATGCTGCTGATTACCAGACAATCCAGATTTTCTACC...GAAAGAGAAAAGCAGCAATAAGTCTTTCTGGATGGTATCATCCAGGAATAGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp AGGTCAGCTTTCTTGTATCAGTTTCTTAGAGTCTGTCCTGGAATCCACACTTTAAAACAGTTCTGTTTGTaGGCCAAGATACCACCTTTG +
Preference number: 5 (lower is better)
Translates to: RSAFLYQFLRVCPGIHTLKQFCL*AKIPPL
Trigger: CAAAGGTGGTATCTTGGCCAACAAACAGAACTGTTT...TAAAGTGTGGATTCCAGGACAGACTCTAAGAAACTGATACAAGAAAGCTGACCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS-3UTR CAA 90 bp CCCCACACTTTCATTCACTCCTTTACCAAGACAACCATAAGTCAGCTTTATTCATATTCTCCTTCAAAGTaGTCTATCAGTTTTACCCAC +
Preference number: 5 (lower is better)
Translates to: PHTFIHSFTKTTISQLYSYSPSK*SISFTH
Trigger: GTGGGTAAAACTGATAGACAACTTTGAAGGAGAATA...TGAATAAAGCTGACTTATGGTTGTCTTGGTAAAGGAGTGAATGAAAGTGTGGGG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp TCCCGGCCCCGTGGCCGGCCTTGGTGTCCACGTGGATaGGCAGGGGGTTGCTCTGCTTCCGGCTGCGGCCCA +
Preference number: 6 (lower is better)
Translates to: SRPRGRPWCPRG*AGGCSASGCGP
Trigger: TGGGCCGCAGCCGGAAGCAGAGCAACCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGA
72% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp TCTTCTATCACTTTGGCGGTGGGTTTCCCGGCCCCGTaGCCGGCCTTGGTGTCCACGTGGATGAGCAGGGGG +
Preference number: 6 (lower is better)
Translates to: SSITLAVGFPAP*PALVSTWMSRG
Trigger: CCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAGAAGA
65% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 90 bp TCTTCTATCACTTTGGCGGTGGGTTTCCCGGCCCCGTGGCCGGCCTaGGTGTCCACGTGGATGAGCAGGGGGTTGCTCTGCTTCCGGCTG +
Preference number: 6 (lower is better)
Translates to: SSITLAVGFPAPWPA*VSTWMSRGLLCFRL
Trigger: CAGCCGGAAGCAGAGCAACCCCCTGCTCATCCACGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAGAAGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp AGTGCAGCGGGACCACGCGGTCGTCGTGGTCAGCCGTaGGGAGAAGCATGGACGGGTACTGGATGTCGTCTG +
Preference number: 6 (lower is better)
Translates to: SAAGPRGRRGQP*GEAWTGTGCRL
Trigger: CAGACGACATCCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGACGACCGCGTGGTCCCGCTGCACT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp TCCGGCTGCGGCCCACGATGTACTGAAGGGTGGCAATaGACTTCAGTGAGTGCAGCGGGACCACGCGGTCGT +
Preference number: 6 (lower is better)
Translates to: SGCGPRCTEGWQ*TSVSAAGPRGR
Trigger: ACGACCGCGTGGTCCCGCTGCACTCACTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCCGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp AACTTCAGTGAGTGCAGCGGGACCACGCGGTCGTCGTaGTCAGCCGTGAGGAGAAGCATGGACGGGTACTGG +
Preference number: 6 (lower is better)
Translates to: NFSECSGTTRSS*SAVRRSMDGYW
Trigger: CCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGACGACCGCGTGGTCCCGCTGCACTCACTGAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp AGCCCACCACGCTGCCCACATCCAGGGGGAAGGTCTTaGGGAGAGCACCAGTCGTCAGGTCGTGAAGCTGTA +
Preference number: 6 (lower is better)
Translates to: SPPRCPHPGGRS*GEHQSSGREAV
Trigger: TACAGCTTCACGACCTGACGACTGGTGCTCTCCTCAAGACCTTCCCCCTGGATGTGGGCAGCGTGGTGGGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp GGGTTGCTCTGCTTCCGGCTGCGGCCCACGATGTACTaGAGGGTGGCAATGAACTTCAGTGAGTGCAGCGGG +
Preference number: 6 (lower is better)
Translates to: GLLCFRLRPTMY*RVAMNFSECSG
Trigger: CCCGCTGCACTCACTGAAGTTCATTGCCACCCTTCAGTACATCGTGGGCCGCAGCCGGAAGCAGAGCAACCC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp CTCGGAGTGCCACTGTACCATCATCCGACAGTGTGTTaGGGTCCAGGAACACTCTGGCCTCCCCCTCTAAGG +
Preference number: 6 (lower is better)
Translates to: LGVPLYHHPTVC*GPGTLWPPPLR
Trigger: CCTTAGAGGGGGAGGCCAGAGTGTTCCTGGACCCCAACACACTGTCGGATGATGGTACAGTGGCACTCCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp CCTCGGAGTGCCACTGTACCATCATCCGACAGTGTGTaGGGGTCCAGGAACACTCTGGCCTCCCCCTCTAAG +
Preference number: 6 (lower is better)
Translates to: PRSATVPSSDSV*GSRNTLASPSK
Trigger: CTTAGAGGGGGAGGCCAGAGTGTTCCTGGACCCCAACACACTGTCGGATGATGGTACAGTGGCACTCCGAGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp TCCGGGAGCTCTTTGGCACCATCGACCTTCATGAACTaGATCGTCACCCAGTCGGAGCCGCTGGCGCTCAGA +
Preference number: 6 (lower is better)
Translates to: SGSSLAPSTFMN*IVTQSEPLALR
Trigger: TCTGAGCGCCAGCGGCTCCGACTGGGTGACGATCAAGTTCATGAAGGTCGATGGTGCCAAAGAGCTCCCGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp CCCTTCCCGTCATGCGTCCAGGCCATGCAGGTGAACTaGACTCTCTCCAGCACATCCGGGAGCTCTTTGGCA +
Preference number: 6 (lower is better)
Translates to: PFPSCVQAMQVN*TLSSTSGSSLA
Trigger: TGCCAAAGAGCTCCCGGATGTGCTGGAGAGAGTCAAGTTCACCTGCATGGCCTGGACGCATGACGGGAAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 90 bp CACCGTGCTATGAACGCAAACATATCCGAGACTTCTTCTATCACTTaGGCGGTGGGTTTCCCGGCCCCGTGGCCGGCCTTGGTGTCCACG +
Preference number: 6 (lower is better)
Translates to: HRAMNANISETSSIT*AVGFPAPWPALVST
Trigger: CGTGGACACCAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAGAAGAAGTCTCGGATATGTTTGCGTTCATAGCACGGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp ACCTGGGCAATAACACAGCCGAAGAGGTCTGGACGCTaGTTTGCGCAAGCAGCTACTAAGAGGCCGCCGTTG +
Preference number: 6 (lower is better)
Translates to: TWAITQPKRSGR*FAQAATKRPPL
Trigger: CAACGGCGGCCTCTTAGTAGCTGCTTGCGCAAATCAGCGTCCAGACCTCTTCGGCTGTGTTATTGCCCAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp TCGTGGTCAGCCGTGAGGAGAAGCATGGACGGGTACTaGATGTCGTCTGCCTCCGGAAGCTTCACATTGTGT +
Preference number: 6 (lower is better)
Translates to: SWSAVRRSMDGY*MSSASGSFTLC
Trigger: ACACAATGTGAAGCTTCCGGAGGCAGACGACATCCAGTACCCGTCCATGCTTCTCCTCACGGCTGACCACGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp ATGAACGCAAACATATCCGAGACTTCTTCTATCACTTaGGCGGTGGGTTTCCCGGCCCCGTGGCCGGCCTTG +
Preference number: 6 (lower is better)
Translates to: MNANISETSSIT*AVGFPAPWPAL
Trigger: CAAGGCCGGCCACGGGGCCGGGAAACCCACCGCCAAAGTGATAGAAGAAGTCTCGGATATGTTTGCGTTCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 90 bp GCCATGCAGGTGAACTTGACTCTCTCCAGCACATCCGGGAGCTCTTaGGCACCATCGACCTTCATGAACTTGATCGTCACCCAGTCGGAG +
Preference number: 6 (lower is better)
Translates to: AMQVNLTLSSTSGSS*APSTFMNLIVTQSE
Trigger: CTCCGACTGGGTGACGATCAAGTTCATGAAGGTCGATGGTGCCAAAGAGCTCCCGGATGTGCTGGAGAGAGTCAAGTTCACCTGCATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp CTCTGTGCCATCGCTCTTCCCGTCCTGCTGCGGGTATaGGTTATAGAACATTCCCTTCCCGTCATGCGTCCA +
Preference number: 6 (lower is better)
Translates to: LCAIALPVLLRV*VIEHSLPVMRP
Trigger: TGGACGCATGACGGGAAGGGAATGTTCTATAACTCATACCCGCAGCAGGACGGGAAGAGCGATGGCACAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp CCAAGACGTGGTAGCAGAGCTTTTGGTGGAGATTGGTaGATGTCTCTGTGCCATCGCTCTTCCCGTCCTGCT +
Preference number: 6 (lower is better)
Translates to: PRRGSRAFGGDW*MSLCHRSSRPA
Trigger: AGCAGGACGGGAAGAGCGATGGCACAGAGACATCCACCAATCTCCACCAAAAGCTCTGCTACCACGTCTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp TCCCCAAGACGTGGTAGCAGAGCTTTTGGTGGAGATTaGTGGATGTCTCTGTGCCATCGCTCTTCCCGTCCT +
Preference number: 6 (lower is better)
Translates to: SPRRGSRAFGGD*WMSLCHRSSRP
Trigger: AGGACGGGAAGAGCGATGGCACAGAGACATCCACCAATCTCCACCAAAAGCTCTGCTACCACGTCTTGGGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp GTATTCGCCATCTTCACTGAAGGCATAACCTCGGAGTaGCACTGTACCATCATCCGACAGTGTGTTGGGGTC +
Preference number: 6 (lower is better)
Translates to: VFAIFTEGITSE*HCTIIRQCVGV
Trigger: GACCCCAACACACTGTCGGATGATGGTACAGTGGCACTCCGAGGTTATGCCTTCAGTGAAGATGGCGAATAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp CTGACACAAGCCACCCATTCTAAGACATCCTTCTCGTaGTCCGGTACGAGCACTTTCCACTTGGACTCGTCA +
Preference number: 6 (lower is better)
Translates to: LTQATHSKTSFS*SGTSTFHLDSS
Trigger: TGACGAGTCCAAGTGGAAAGTGCTCGTACCGGAGCACGAGAAGGATGTCTTAGAATGGGTGGCTTGTGTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp CATCATCCGACAGTGTGTTGGGGTCCAGGAACACTCTaGCCTCCCCCTCTAAGGAGTCTTGCACATATAACA +
Preference number: 6 (lower is better)
Translates to: HHPTVCWGPGTL*PPPLRSLAHIT
Trigger: TGTTATATGTGCAAGACTCCTTAGAGGGGGAGGCCAGAGTGTTCCTGGACCCCAACACACTGTCGGATGATG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp ACCACAGTCGGTTTACTGGATCACATCCCTCCCAGATaGATAACAAGACGTACCGGCCATCGTCGGATAGCT +
Preference number: 6 (lower is better)
Translates to: TTVGLLDHIPPR*ITRRTGHRRIA
Trigger: AGCTATCCGACGATGGCCGGTACGTCTTGTTATCCATCTGGGAGGGATGTGATCCAGTAAACCGACTGTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp GTGAACTTGACTCTCTCCAGCACATCCGGGAGCTCTTaGGCACCATCGACCTTCATGAACTTGATCGTCACC +
Preference number: 6 (lower is better)
Translates to: VNLTLSSTSGSS*APSTFMNLIVT
Trigger: GGTGACGATCAAGTTCATGAAGGTCGATGGTGCCAAAGAGCTCCCGGATGTGCTGGAGAGAGTCAAGTTCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp CGTCATGGAGGTAGCACAAGACCAGGAAGTTGGACCTaGCACAAGCCACCCATTCTAAGACATCCTTCTCGT +
Preference number: 6 (lower is better)
Translates to: RHGGSTRPGSWT*HKPPILRHPSR
Trigger: ACGAGAAGGATGTCTTAGAATGGGTGGCTTGTGTCAGGTCCAACTTCCTGGTCTTGTGCTACCTCCATGACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp TCCAGGAACACTCTGGCCTCCCCCTCTAAGGAGTCTTaGACATATAACACGCGTTGGTTCTGCAAACCTGTA +
Preference number: 6 (lower is better)
Translates to: SRNTLASPSKES*TYNTRWFCKPV
Trigger: TACAGGTTTGCAGAACCAACGCGTGTTATATGTGCAAGACTCCTTAGAGGGGGAGGCCAGAGTGTTCCTGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp ACCCACTTCAGGATTCCGGTGATACCATTGGGTTCTTaGTGGAGGTCACAGTACCACAGTCGGTTTACTGGA +
Preference number: 6 (lower is better)
Translates to: THFRIPVIPLGS*WRSQYHSRFTG
Trigger: TCCAGTAAACCGACTGTGGTACTGTGACCTCCAGCAAGAACCCAATGGTATCACCGGAATCCTGAAGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp TACCCACTTCAGGATTCCGGTGATACCATTGGGTTCTaGCTGGAGGTCACAGTACCACAGTCGGTTTACTGG +
Preference number: 6 (lower is better)
Translates to: YPLQDSGDTIGF*LEVTVPQSVYW
Trigger: CCAGTAAACCGACTGTGGTACTGTGACCTCCAGCAAGAACCCAATGGTATCACCGGAATCCTGAAGTGGGTA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS TCA 72 bp CGCTCAGACCATAGGCAAAGTATTCGCCATCTTCACTaGAGGCATAACCTCGGAGTGCCACTGTACCATCAT +
Preference number: 6 (lower is better)
Translates to: RSDHRQSIRHLH*RHNLGVPLYHH
Trigger: ATGATGGTACAGTGGCACTCCGAGGTTATGCCTTCAGTGAAGATGGCGAATACTTTGCCTATGGTCTGAGCG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp GTAATCTTGTTTTGTGCCTCCACGAAAGCCTTAGTCTaGTCGCTGTCTGGGTCTTCAAGCCAAGAATACGGG +
Preference number: 6 (lower is better)
Translates to: VILFCASTKALV*SLSGSSSQEYG
Trigger: CCCGTATTCTTGGCTTGAAGACCCAGACAGCGAGCAGACTAAGGCTTTCGTGGAGGCACAAAACAAGATTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CCA 72 bp CACTTCAGGATTCCGGTGATACCATTGGGTTCTTGCTaGAGGTCACAGTACCACAGTCGGTTTACTGGATCA +
Preference number: 6 (lower is better)
Translates to: HFRIPVIPLGSC*RSQYHSRFTGS
Trigger: TGATCCAGTAAACCGACTGTGGTACTGTGACCTCCAGCAAGAACCCAATGGTATCACCGGAATCCTGAAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp GCAGCACACTGGAAGTCATCAAAACAGTTCTGTTTGTaGGCCAAGATACCACCTTTGTGCCACGTCTCTCCG +
Preference number: 6 (lower is better)
Translates to: AAHWKSSKQFCL*AKIPPLCHVSP
Trigger: CGGAGAGACGTGGCACAAAGGTGGTATCTTGGCCAACAAACAGAACTGTTTTGATGACTTCCAGTGTGCTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp GGGTACTGGATGTCGTCTGCCTCCGGAAGCTTCACATaGTGTAGTGGCGAGTATTTGAGAAGCCATTCAAAG +
Preference number: 6 (lower is better)
Translates to: GYWMSSASGSFT*CSGEYLRSHSK
Trigger: CTTTGAATGGCTTCTCAAATACTCGCCACTACACAATGTGAAGCTTCCGGAGGCAGACGACATCCAGTACCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 90 bp ACCTCTGATTGGACATTGCTCAAGAAATGGCACAGTAATCTTGTTTaGTGCCTCCACGAAAGCCTTAGTCTGCTCGCTGTCTGGGTCTTC +
Preference number: 6 (lower is better)
Translates to: TSDWTLLKKWHSNLV*CLHESLSLLAVWVF
Trigger: GAAGACCCAGACAGCGAGCAGACTAAGGCTTTCGTGGAGGCACAAAACAAGATTACTGTGCCATTTCTTGAGCAATGTCCAATCAGAGGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp ACATTGCTCAAGAAATGGCACAGTAATCTTGTTTTGTaGCTCCACGAAAGCCTTAGTCTGCTCGCTGTCTGG +
Preference number: 6 (lower is better)
Translates to: TLLKKWHSNLVL*LHESLSLLAVW
Trigger: CCAGACAGCGAGCAGACTAAGGCTTTCGTGGAGGCACAAAACAAGATTACTGTGCCATTTCTTGAGCAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp TGGACATTGCTCAAGAAATGGCACAGTAATCTTGTTTaGTGCCTCCACGAAAGCCTTAGTCTGCTCGCTGTC +
Preference number: 6 (lower is better)
Translates to: WTLLKKWHSNLV*CLHESLSLLAV
Trigger: GACAGCGAGCAGACTAAGGCTTTCGTGGAGGCACAAAACAAGATTACTGTGCCATTTCTTGAGCAATGTCCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp TCAGCAGCACACTGGAAGTCATCAAAACAGTTCTGTTaGTTGGCCAAGATACCACCTTTGTGCCACGTCTCT +
Preference number: 6 (lower is better)
Translates to: SAAHWKSSKQFC*LAKIPPLCHVS
Trigger: AGAGACGTGGCACAAAGGTGGTATCTTGGCCAACAAACAGAACTGTTTTGATGACTTCCAGTGTGCTGCTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS CAA 72 bp GCCTCCGGAAGCTTCACATTGTGTAGTGGCGAGTATTaGAGAAGCCATTCAAAGTGTTGTTTAGTGTCGGAG +
Preference number: 6 (lower is better)
Translates to: ASGSFTLCSGEY*RSHSKCCLVSE
Trigger: CTCCGACACTAAACAACACTTTGAATGGCTTCTCAAATACTCGCCACTACACAATGTGAAGCTTCCGGAGGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4
CDS GCA 72 bp TTGTTTAGTGTCGGAGCACCCGTAATCAGTGGTCCATaGATGGCCGATAGTAAATTTGTGGAACTTCAACAT +
Preference number: 6 (lower is better)
Translates to: LFSVGAPVISGP*MADSKFVELQH
Trigger: ATGTTGAAGTTCCACAAATTTACTATCGGCCATGCATGGACCACTGATTACGGGTGCTCCGACACTAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099858.4