Pregenerated sensors for PRELP (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041577Ensembl transcript IDs: ENSMUST00000048432.6
Found 140 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAAGAGAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTaGTCACCTGGGCTAGGAAAGGAGGGTAGCAAGTCTGCGGGGGAG | + |
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Preference number: 1 (lower is better) Translates to: RRERQGAQVLGNPPS*SPGLGKEGSKSAGE Trigger: CTCCCCCGCAGACTTGCTACCCTCCTTTCCTAGCCCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTCTCTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 90 bp | GGGAGCGAGAGAGGGAGACAGATAAAAACAGTGGACCCCAGAGCTTaGGCCACCAGCCTTCAAGTGCTGTCAGAGGAGGTCCAGCTCTGG | + |
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Preference number: 1 (lower is better) Translates to: GSERGRQIKTVDPRA*ATSLQVLSEEVQLW Trigger: CCAGAGCTGGACCTCCTCTGACAGCACTTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCACTGTTTTTATCTGTCTCCCTCTCTCGCTCCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 90 bp | GGCTGTTCCTTTCTGAGGCCCAGCCAAGAGGGTGTGTACTGTGTTTaGCCCAAAGGAGGGAGATGGGAAGCGGAGGAAAGGCTGGAAGTT | + |
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Preference number: 1 (lower is better) Translates to: GCSFLRPSQEGVYCV*PKGGRWEAEERLEV Trigger: AACTTCCAGCCTTTCCTCCGCTTCCCATCTCCCTCCTTTGGGGCAAACACAGTACACACCCTCTTGGCTGGGCCTCAGAAAGGAACAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 90 bp | GCCCATGGCCCTCTTCCCCTAGGGAATCAGGGAATTGCAGTATCATaGCACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTA | + |
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Preference number: 1 (lower is better) Translates to: AHGPLPLGNQGIAVS*HQPPDVADESALEV Trigger: TACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTGGCATGATACTGCAATTCCCTGATTCCCTAGGGGAAGAGGGCCATGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 90 bp | CCCCAGCCTCTGCCCTTTCCTTCAGACCCAGTAGGAGAAAGCCCATaGCCCTCTTCCCCTAGGGAATCAGGGAATTGCAGTATCATGCCA | + |
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Preference number: 1 (lower is better) Translates to: PQPLPFPSDPVGESP*PSSPRESGNCSIMP Trigger: TGGCATGATACTGCAATTCCCTGATTCCCTAGGGGAAGAGGGCCATGGGCTTTCTCCTACTGGGTCTGAAGGAAAGGGCAGAGGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR TCA 90 bp | GATTGCAGGGCTTGGCGACATCCACATAGGCCCAGTTTTGGGCTCTaGCCCCACAGCTACCCTCCTATTAGCCAAAGTCTAGTTCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: DCRAWRHPHRPSFGL*PHSYPPISQSLVPC Trigger: GCAAGGAACTAGACTTTGGCTAATAGGAGGGTAGCTGTGGGGTCAGAGCCCAAAACTGGGCCTATGTGGATGTCGCCAAGCCCTGCAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR TCA 90 bp | TGGGGGAAGAGAGGGGATATGTCTGTTGGCGTACACCTGTGTTTCTaGAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTGGCAG | + |
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Preference number: 1 (lower is better) Translates to: WGKRGDMSVGVHLCF*SKGRPKKSRGLGWQ Trigger: CTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAACACAGGTGTACGCCAACAGACATATCCCCTCTCTTCCCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 90 bp | GGGAGAGGAAAAAGCCTCCAGAGACTCCCCCAGCCTAAGGAGAATTaGTCCTGTGCCTCACTCACTTCTAGAACATTCATCTCCACATCC | + |
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Preference number: 1 (lower is better) Translates to: GRGKSLQRLPQPKEN*SCASLTSRTFISTS Trigger: GGATGTGGAGATGAATGTTCTAGAAGTGAGTGAGGCACAGGACCAATTCTCCTTAGGCTGGGGGAGTCTCTGGAGGCTTTTTCCTCTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 90 bp | CTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTaGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTC | + |
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Preference number: 1 (lower is better) Translates to: LSEELETVGNRVTSV*CQETVAEDSFGRDL Trigger: GAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCGCCCAGCCTTACCCATaGGAGACTCGTGGTGTGGGG | + |
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Preference number: 2 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAAQPYP*ETRGVG Trigger: CCCCACACCACGAGTCTCTCATGGGTAAGGCTGGGC...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CAA 90 bp | TGGCTGTTCCTTTCTGAGGCCCAGCCAAGAGGGTGTGTACTGTGTTaGCCCCAAAGGAGGGAGATGGGAAGCGGAGGAAAGGCTGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: WLFLSEAQPRGCVLC*PQRREMGSGGKAGS Trigger: ACTTCCAGCCTTTCCTCCGCTTCCCATCTCCCTCCTTTGGGGCAAACACAGTACACACCCTCTTGGCTGGGCCTCAGAAAGGAACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCGGTTCACCTCTGGAATaGCTTCTGCTTCTGACTCGG | + |
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Preference number: 2 (lower is better) Translates to: HQPPDVADESALEVEANPGSPLE*LLLLTR Trigger: CCGAGTCAGAAGCAGAAGTCATTCCAGAGGTGAACC...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CCA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCGAGAGACTCGTGGTGTaGGGGAAGAGAGGGGATATG | + |
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Preference number: 2 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAERLVV*GKRGDM Trigger: CATATCCCCTCTCTTCCCCCACACCACGAGTCTCTC...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTGTGAAGCTTGCTGGAATGCGGACGCTGTATCAGAGTTAACATGGTCTCCCAGTTTTGGGCTCTaGCCCCACAGCTACCCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LCCEACWNADAVSELTWSPSFGL*PHSYPP Trigger: AGGAGGGTAGCTGTGGGGTCAGAGCCCAAAACTGGG...AGACCATGTTAACTCTGATACAGCGTCCGCATTCCAGCAAGCTTCACAGCAGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CCA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGGTGGACCCCAGAGCTTaGGCCACCAGCCTTCAAGTG | + |
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Preference number: 2 (lower is better) Translates to: CKASLTLVPLADGCREQWVDPRA*ATSLQV Trigger: CACTTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCAC...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CCA 90 bp | CCAGTAGGAGAAAGCCCATGGCCCTCTTCCCCTAGGGAATCAGGGAATTGCAGTTATGGAAGAGGCTTCTaGGAGATTCCCAGGTGCTCC | + |
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Preference number: 2 (lower is better) Translates to: PVGESPWPSSPRESGNCSYGRGF*EIPRCS Trigger: GGAGCACCTGGGAATCTCCCAGAAGCCTCTTCCATA...ACTGCAATTCCCTGATTCCCTAGGGGAAGAGGGCCATGGGCTTTCTCCTACTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGCAGAGGGAGAATGGGTaGTGCCACTTGTCCTGCGCT | + |
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Preference number: 2 (lower is better) Translates to: CKASLTLVPLADGCREQWQRENG*CHLSCA Trigger: AGCGCAGGACAAGTGGCATCACCCATTCTCCCTCTG...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGTCCCTGTGGGCCTCCTaGAAGGGGCAAAAGTTGCAG | + |
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Preference number: 2 (lower is better) Translates to: CKASLTLVPLADGCREQWSLWAS*KGQKLQ Trigger: CTGCAACTTTTGCCCCTTTCAGGAGGCCCACAGGGA...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CCA 90 bp | CCTCTTGGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGAGGTGTCAGGAAACAGTaGCAGAGGACAGCTTTGGAA | + |
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Preference number: 2 (lower is better) Translates to: PLGPPLSSLGKGDCRAWRGVRKQ*QRTALE Trigger: TTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACC...TCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCCAAGAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CAA 90 bp | ACCTGTGTTTCTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTaGGCTGGCAGGGTGTCTTTGGGCTGGGTGGGGAATCTTGCTTTA | + |
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Preference number: 2 (lower is better) Translates to: TCVSEAKGDQRRAEV*AGRVSLGWVGNLAL Trigger: TAAAGCAAGATTCCCCACCCAGCCCAAAGACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAACACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CAA 90 bp | CCCATGAGAGACTCGTGGTGTGGGGGAAGAGAGGGGATATGTCTGTaGGCGTACACCTGTGTTTCTGAAGCAAAGGGAGACCAAAGAAGA | + |
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Preference number: 2 (lower is better) Translates to: PMRDSWCGGREGICL*AYTCVSEAKGDQRR Trigger: TCTTCTTTGGTCTCCCTTTGCTTCAGAAACACAGGTGTACGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGTCTCTCATGGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | GGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGACATCCAGTACACCTGTGTTTCTaGAGCAAAGGGAGACCAAAG | + |
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Preference number: 2 (lower is better) Translates to: GPPLSSLGKGDCRAWRHPVHLCF*SKGRPK Trigger: CTTTGGTCTCCCTTTGCTTCAGAAACACAGGTGTAC...TGGATGTCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | ATTGCAGTATCATGCCACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGATTTGTCGGCCTTCTTaGGACAGTTACCCAAATGGG | + |
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Preference number: 2 (lower is better) Translates to: IAVSCHQPPDVADESALEICRPS*DSYPNG Trigger: CCCATTTGGGTAACTGTCTCAAGAAGGCCGACAAAT...CTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTGGCATGATACTGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCTGTGAAGCTTGCTGGAATGCGGACGCTGTATCAGAGTTAACATGGTCTGCTAATGGCACTGATTaGATAAACTTGTGTGAGGAG | + |
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Preference number: 2 (lower is better) Translates to: LCCEACWNADAVSELTWSANGTD*INLCEE Trigger: CTCCTCACACAAGTTTATTCAATCAGTGCCATTAGC...AGACCATGTTAACTCTGATACAGCGTCCGCATTCCAGCAAGCTTCACAGCAGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR GCA 90 bp | TGTATCAGAGTTAACATGGTCTTTTGGAGAATAGATAAGATGTACAGGGTGAGAGCAGGTTGTCATAGGTaGAGAAGGGGCTTGTCCAGG | + |
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Preference number: 2 (lower is better) Translates to: CIRVNMVFWRIDKMYRVRAGCHR*RRGLSR Trigger: CCTGGACAAGCCCCTTCTGCACCTATGACAACCTGC...TCTCACCCTGTACATCTTATCTATTCTCCAAAAGACCATGTTAACTCTGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CCA 90 bp | TGTATCAGAGTTAACATGGTCTTTTGGAGAATAGATAAGATGTACAGGGTGAGACACAAACAGGAGCTCTaGGAGGGACTCAGTTTACAG | + |
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Preference number: 2 (lower is better) Translates to: CIRVNMVFWRIDKMYRVRHKQEL*EGLSLQ Trigger: CTGTAAACTGAGTCCCTCCCAGAGCTCCTGTTTGTG...TCTCACCCTGTACATCTTATCTATTCTCCAAAAGACCATGTTAACTCTGATACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 72 bp | AGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTaGTCACCTGGGCTAGGAAAGGAGGGTAGCAAGTCT | + |
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Preference number: 3 (lower is better) Translates to: RQGAQVLGNPPS*SPGLGKEGSKS Trigger: AGACTTGCTACCCTCCTTTCCTAGCCCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | CCATGGCCCAGCCTTACCCATGAGAGACTCGTGGTGTaGGGGAAGAGAGGGGATATGTCTGTTGGCGTACAC | + |
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Preference number: 3 (lower is better) Translates to: PWPSLTHERLVV*GKRGDMSVGVH Trigger: GTGTACGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGTCTCTCATGGGTAAGGCTGGGCCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | TCAGTCCATGGCCCAGCCTTACCCATGAGAGACTCGTaGTGTGGGGGAAGAGAGGGGATATGTCTGTTGGCG | + |
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Preference number: 3 (lower is better) Translates to: SVHGPALPMRDS*CGGREGICLLA Trigger: CGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGTCTCTCATGGGTAAGGCTGGGCCATGGACTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | GAGGGAGATGGGAAGCGGAGGAAAGGCTGGAAGTTGTaGGGAAACCCTGACCCTCCACCCCACCTTAGTCAT | + |
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Preference number: 3 (lower is better) Translates to: EGDGKRRKGWKL*GNPDPPPHLSH Trigger: ATGACTAAGGTGGGGTGGAGGGTCAGGGTTTCCCCACAACTTCCAGCCTTTCCTCCGCTTCCCATCTCCCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CAA 90 bp | CCTCTTGGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGACACATAGGCCCAGTTTaGGGCTCTGACCCCACAGCT | + |
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Preference number: 3 (lower is better) Translates to: PLGPPLSSLGKGDCRAWRHIGPV*GSDPTA Trigger: AGCTGTGGGGTCAGAGCCCAAAACTGGGCCTATGTG...TCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCCAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 72 bp | CCTCTTCCCCTAGGGAATCAGGGAATTGCAGTATCATaGCACCAGCCACCAGATGTCGCTGATGAGTCGGCC | + |
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Preference number: 3 (lower is better) Translates to: PLPLGNQGIAVS*HQPPDVADESA Trigger: GGCCGACTCATCAGCGACATCTGGTGGCTGGTGGCATGATACTGCAATTCCCTGATTCCCTAGGGGAAGAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | AGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTaGCAGGGTGTCTTTGGGCTGGGTGGGGAATCTTGC | + |
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Preference number: 3 (lower is better) Translates to: SKGRPKKSRGLG*QGVFGLGGESC Trigger: GCAAGATTCCCCACCCAGCCCAAAGACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | CTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTaGCTGGCAGGGTGTCTTTGGGCTGGGTGGGGAATC | + |
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Preference number: 3 (lower is better) Translates to: LKQRETKEEQRS*LAGCLWAGWGI Trigger: GATTCCCCACCCAGCCCAAAGACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CAA 90 bp | GGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGACATCCAGGGTGTGTACTGTGTTaGCCCCAAAGGAGGGAGATG | + |
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Preference number: 3 (lower is better) Translates to: GPPLSSLGKGDCRAWRHPGCVLC*PQRREM Trigger: CATCTCCCTCCTTTGGGGCAAACACAGTACACACCC...TGGATGTCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 72 bp | CCCCAGTATGGAAGAGGCTTCTGGGAGATTCCCAGGTaGTCCACCTCTTCCTCTGTTTCTCAAGAACTGCCC | + |
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Preference number: 3 (lower is better) Translates to: PQYGRGFWEIPR*STSSSVSQELP Trigger: GGGCAGTTCTTGAGAAACAGAGGAAGAGGTGGAGCACCTGGGAATCTCCCAGAAGCCTCTTCCATACTGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | AGAGGGAGACAGATAAAAACAGTGGACCCCAGAGCTTaGGCCACCAGCCTTCAAGTGCTGTCAGAGGAGGTC | + |
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Preference number: 3 (lower is better) Translates to: RGRQIKTVDPRA*ATSLQVLSEEV Trigger: GACCTCCTCTGACAGCACTTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCACTGTTTTTATCTGTCTCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | CTGCCCTTTCCTTCAGACCCAGTAGGAGAAAGCCCATaGCCCTCTTCCCCTAGGGAATCAGGGAATTGCAGT | + |
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Preference number: 3 (lower is better) Translates to: LPFPSDPVGESP*PSSPRESGNCS Trigger: ACTGCAATTCCCTGATTCCCTAGGGGAAGAGGGCCATGGGCTTTCTCCTACTGGGTCTGAAGGAAAGGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR TCA 72 bp | GCTTGGCGACATCCACATAGGCCCAGTTTTGGGCTCTaGCCCCACAGCTACCCTCCTATTAGCCAAAGTCTA | + |
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Preference number: 3 (lower is better) Translates to: AWRHPHRPSFGL*PHSYPPISQSL Trigger: TAGACTTTGGCTAATAGGAGGGTAGCTGTGGGGTCAGAGCCCAAAACTGGGCCTATGTGGATGTCGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 72 bp | GGCTGGCAGGGTGTCTTTGGGCTGGGTGGGGAATCTTaGTTTAGAGCCGGAGCAGGTTATACAGTATTTACC | + |
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Preference number: 3 (lower is better) Translates to: GWQGVFGLGGES*FRAGAGYTVFT Trigger: GGTAAATACTGTATAACCTGCTCCGGCTCTAAAGCAAGATTCCCCACCCAGCCCAAAGACACCCTGCCAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | ACTCGTGGTGTGGGGGAAGAGAGGGGATATGTCTGTTaGCGTACACCTGTGTTTCTGAAGCAAAGGGAGACC | + |
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Preference number: 3 (lower is better) Translates to: TRGVGEERGYVC*RTPVFLKQRET Trigger: GGTCTCCCTTTGCTTCAGAAACACAGGTGTACGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | GAGGTAGAGGCTAATCCCCAGTATGGAAGAGGCTTCTaGGAGATTCCCAGGTGCTCCACCTCTTCCTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: EVEANPQYGRGF*EIPRCSTSSSV Trigger: AACAGAGGAAGAGGTGGAGCACCTGGGAATCTCCCAGAAGCCTCTTCCATACTGGGGATTAGCCTCTACCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CAA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATAGTGGACCCCAGAGCTaGGGCCACCAGCCTTCAAGT | + |
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Preference number: 3 (lower is better) Translates to: PGKASVKLASLRLSKTSHSGPQS*GHQPSS Trigger: ACTTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCACT...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR GCA 72 bp | CTTGGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTaGAGGGCTTGGCGACATCCACATAGGCCCAGTTTT | + |
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Preference number: 3 (lower is better) Translates to: LGPPLSSLGKGD*RAWRHPHRPSF Trigger: AAAACTGGGCCTATGTGGATGTCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | GAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTaGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGA | + |
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Preference number: 3 (lower is better) Translates to: ELETVGNRVTSV*CQETVAEDSFG Trigger: TCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CAA 90 bp | CTCTGCTGTGAAGCTTGCTGGAATGCGGACGCTGTATCAGAGTTAACATGGTCTCCAAAGTCTAGTTCCTaGCACCACTTTGTCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: LCCEACWNADAVSELTWSPKSSS*HHFVPG Trigger: GCCAGGGACAAAGTGGTGCAAGGAACTAGACTTTGG...AGACCATGTTAACTCTGATACAGCGTCCGCATTCCAGCAAGCTTCACAGCAGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR CCA 72 bp | GCTCCACCTCTTCCTCTGTTTCTCAAGAACTGCCCTTaGGGTGGGATGACTCGACTGAGTCTCACACATAAT | + |
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Preference number: 3 (lower is better) Translates to: APPLPLFLKNCP*GGMTRLSLTHN Trigger: ATTATGTGTGAGACTCAGTCGAGTCATCCCACCCCAAGGGCAGTTCTTGAGAAACAGAGGAAGAGGTGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR TCA 72 bp | AGAGGGGATATGTCTGTTGGCGTACACCTGTGTTTCTaGAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTT | + |
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Preference number: 3 (lower is better) Translates to: RGDMSVGVHLCF*SKGRPKKSRGL Trigger: AAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAACACAGGTGTACGCCAACAGACATATCCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| 3UTR-3UTR CAA 90 bp | TGTATCAGAGTTAACATGGTCTTTTGGAGAATAGATAAGATGTACAGGGTGAGAGATGCTAGTTCAGGTTaGCAGGATCAGTGCCTGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CIRVNMVFWRIDKMYRVRDASSG*QDQCLP Trigger: GGGCAGGCACTGATCCTGCAAACCTGAACTAGCATC...TCTCACCCTGTACATCTTATCTATTCTCCAAAAGACCATGTTAACTCTGATACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR-3UTR CAA 90 bp | TGTATCAGAGTTAACATGGTCTTTTGGAGAATAGATAAGATGTACAGGGTGAGAACTAGGGTGAGGAAGTaGCACAGCAGGGAAAAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: CIRVNMVFWRIDKMYRVRTRVRK*HSREKR Trigger: CCTCTTTTCCCTGCTGTGCAACTTCCTCACCCTAGT...TCTCACCCTGTACATCTTATCTATTCTCCAAAAGACCATGTTAACTCTGATACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | GAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTGCTCACCTGGGCTAGGTTCTCCAGCTTGCTaGACACTCCGGGCGGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: ERQGAQVLGNPPSCSPGLGSPAC*TLRAGS Trigger: GGATCCCGCCCGGAGTGTTCAGCAAGCTGGAGAACC...TAGCCCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCGGCGGAAGCACATCATaGGGTCCAGTGGGATGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: HQPPDVADESALEVEANPGGSTS*GPVGWE Trigger: CTCCCATCCCACTGGACCTCATGATGTGCTTCCGCC...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | AGGAAAGGCTGGAAGTTGTGGGGAAACCCTGACCCTCCACCCCACCTTAGTCATAGAGGAATGCCAGGCTaGGGAGCTTCCCCAGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: RKGWKLWGNPDPPPHLSHRGMPG*GASPAL Trigger: GAGTGCTGGGGAAGCTCCCCAGCCTGGCATTCCTCT...ATGACTAAGGTGGGGTGGAGGGTCAGGGTTTCCCCACAACTTCCAGCCTTTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGGGATTCGGGGTGGGATaGCGGGGACCCTTCGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: CKASLTLVPLADGCREQWGFGVG*RGPFAG Trigger: ACCTGCGAAGGGTCCCCGTCATCCCACCCCGAATCC...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | TTCTCATTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCGGAAGGTGTCGGCCTTaGAGACGCCGTCGCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: FSFTITPDRNEPPASALSGRCRP*RRRRSA Trigger: GGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCC...GGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAATGAGAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCGTAATGGATTCGGGGTaGGATGACGGGGACCCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAVMDSG*DDGDPS Trigger: CGAAGGGTCCCCGTCATCCCACCCCGAATCCATTAC...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | CAAAGAAGAGCAGAGGTCTTGGCTGGCAGGGTGTCTTaGGGCTGGGTGGGGAATCTTGCTTTAGAGCCGGAG | + |
|
Preference number: 4 (lower is better) Translates to: QRRAEVLAGRVS*GWVGNLALEPE Trigger: CTCCGGCTCTAAAGCAAGATTCCCCACCCAGCCCAAAGACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | ATTGCAGGGCTTGGCGACATCCACATAGGCCCAGTTTaGGGCTCTGACCCCACAGCTACCCTCCTATTAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IAGLGDIHIGPV*GSDPTATLLLA Trigger: GGCTAATAGGAGGGTAGCTGTGGGGTCAGAGCCCAAAACTGGGCCTATGTGGATGTCGCCAAGCCCTGCAAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCTTGCTGATCTTGTTGTaGGACAGGTGGAGCACCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HQPPDVADESALEVEANPLLILL*DRWSTS Trigger: GCTGGTGCTCCACCTGTCTCACAACAAGATCAGCAA...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | AGAGGGAGACAGATAAAAACAGTGGACCCCAGAGCTTGGGCCACCAGCCTTCAATTTGGTCTTGTCGGTTaGCCTTGGGCCACTGAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RGRQIKTVDPRAWATSLQFGLVG*PWATEA Trigger: GGCCTCAGTGGCCCAAGGCCAACCGACAAGACCAAA...TTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCACTGTTTTTATCTGTCTCCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | TTCTCATTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCGTCTGTCGGCTCTGCTaGCTCGGGGGCCTGAGGAAA | + |
|
Preference number: 4 (lower is better) Translates to: FSFTITPDRNEPPASALSVCRLC*LGGLRK Trigger: TTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGAC...GGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAATGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCTTCCCCAGCACTCTCTaGTCCACCTTGCGAATTCGG | + |
|
Preference number: 4 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAFPSTL*STLRIR Trigger: CCGAATTCGCAAGGTGGACCAGAGAGTGCTGGGGAA...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCAGGTTTTTGAGGCCCTaGAAGGTGTCGGCCTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: HQPPDVADESALEVEANPRFLRP*KVSALK Trigger: CTTCAAGGCCGACACCTTCCAGGGCCTCAAAAACCT...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | GAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTGCTCACCTGGGCTAAGTACCCGTTGGGGATaGTCTCGATCTTGTTGCTAT | + |
|
Preference number: 4 (lower is better) Translates to: ERQGAQVLGNPPSCSPGLSTRWG*SRSCCY Trigger: ATAGCAACAAGATCGAGACCATCCCCAACGGGTACT...TAGCCCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | GAGAGGGAGACAGATAAAAACAGTGGACCCCAGAGCTaGGGCCACCAGCCTTCAAGTGCTGTCAGAGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: ERETDKNSGPQS*GHQPSSAVRGG Trigger: ACCTCCTCTGACAGCACTTGAAGGCTGGTGGCCCAAGCTCTGGGGTCCACTGTTTTTATCTGTCTCCCTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | CACTTCCTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTGGCCACTGAGGCCAAGATaGGGAGAAGTGGGAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLSEELETVGNRVTSVWPLRPR*GEVGGA Trigger: GGCTCCTCCCACTTCTCCTCATCTTGGCCTCAGTGG...CCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAGGAAGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | GGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGACATCCATGTAGTTCATGCGGATaGAGGCCAGGTTGGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: GPPLSSLGKGDCRAWRHPCSSCG*RPGWGS Trigger: ACTTCCCCAACCTGGCCTTCATCCGCATGAACTACA...TGGATGTCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTGGCAGGGTGTCTCCATGTAGAGGAATaGCAGGCTGGGGAGCTTCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKQRETKEEQRSWLAGCLHVEE*QAGELP Trigger: GGGAAGCTCCCCAGCCTGGCATTCCTCTACATGGAG...ACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | GACTCGTGGTGTGGGGGAAGAGAGGGGATATGTCTGTaGGCGTACACCTGTGTTTCTGAAGCAAAGGGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: DSWCGGREGICL*AYTCVSEAKGD Trigger: GTCTCCCTTTGCTTCAGAAACACAGGTGTACGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | CTGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTaGGAAGGGATCTCAGGCCTAGGAGACCTGGATTTG | + |
|
Preference number: 4 (lower is better) Translates to: LSGVRKQWQRTA*EGISGLGDLDL Trigger: CAAATCCAGGTCTCCTAGGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | GCCTTGGAGAAACCAGCTGCAACTAGGGTGAGGAAGTaGCACAGCAGGGAAAAGAGGTTGTGTGAAGTGGGC | + |
|
Preference number: 4 (lower is better) Translates to: ALEKPAATRVRK*HSREKRLCEVG Trigger: GCCCACTTCACACAACCTCTTTTCCCTGCTGTGCAACTTCCTCACCCTAGTTGCAGCTGGTTTCTCCAAGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR GCA 90 bp | CACTTCCTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTGGCTCAGCCGATTGTGCTaGAGATCCAGGAGCAGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: HFLSEELETVGNRVTSVWLSRLC*RSRSSR Trigger: CCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAG...CCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR GCA 90 bp | CACTTCCTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTGGTCGCTCAGCCGATTGTaGTGCAGATCCAGGAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: HFLSEELETVGNRVTSVWSLSRL*CRSRSS Trigger: GCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGA...CCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAGGAAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR GCA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCTGGTCTCGATCTTGTTaGTATCCAGGTAGAGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: HQPPDVADESALEVEANPWSRSC*YPGRAG Trigger: ACCAGCTCTACCTGGATAGCAACAAGATCGAGACCA...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CCA 90 bp | ATTGCAGTATCATGCCACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGAGGCCCGTGGCATTCTaGAAAGATTCCAGAGGAAGC | + |
|
Preference number: 4 (lower is better) Translates to: IAVSCHQPPDVADESALERPVAF*KDSRGS Trigger: GCTTCCTCTGGAATCTTTCCAGAATGCCACGGGCCT...CTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTGGCATGATACTGCAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | CATCTGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGCAAGTTGGAGATGTTaGAGGAGTTCTTGGGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HLSGVRKQWQRTALEGISASWRC*RSSWGA Trigger: GGCTCCCCAAGAACTCCTTCAACATCTCCAACTTGC...TGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACAGATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | TTCTCATTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCCCCACCTCAGGCCCGTaGCATTCTGGAAAGATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: FSFTITPDRNEPPASALSPTSGP*HSGKIP Trigger: TGGAATCTTTCCAGAATGCCACGGGCCTGAGGTGGG...GGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAATGAGAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | ATTGCAGTATCATGCCACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGTCCGAGGAGAAGTCATaGAAGGCCACTAGGTTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: IAVSCHQPPDVADESALESEEKS*KATRLL Trigger: CAACAACCTAGTGGCCTTCCATGACTTCTCCTCGGA...CTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTGGCATGATACTGCAAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | CCTCTTGGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGACTATGCTATTGTTGTTaGGGTACAGGTGTTCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGPPLSSLGKGDCRAWRLCYCC*GTGVPA Trigger: AGCTGGAACACCTGTACCTCAACAACAATAGCATAG...TCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCCAAGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR GCA 90 bp | TTTCTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTGGCAGGGTGTTGGGCTAGATTGAGCTaGATGAGGTTTTTGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: FLKQRETKEEQRSWLAGCWARLS*MRFLRP Trigger: GGGCCTCAAAAACCTCATGCAGCTCAATCTAGCCCA...ACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | AATTGGTCCTGTGCCTCACTCACTTCTAGAACATTCATCTCCACATCCTTCTCCCTTGTCGGTTGGCCTTaGGCCACTGAGGCCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: NWSCASLTSRTFISTSFSLVGWP*ATEAKM Trigger: CATCTTGGCCTCAGTGGCCCAAGGCCAACCGACAAG...GGAGAAGGATGTGGAGATGAATGTTCTAGAAGTGAGTGAGGCACAGGACCAATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | CACTTCCTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTGGCTGGAAATGAGGTTCTaGCTCAGCCTCAGCTGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: HFLSEELETVGNRVTSVWLEMRF*LSLSCS Trigger: GGAACAGCTGAGGCTGAGCCAGAACCTCATTTCCAG...CCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAGGAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | CCTCTTGGCCCTCCATTGTCAAGTTTGGGTAAGGGAGATTGCAGGGCTTGGCGATTGTTGGGGCAAATCTaGGTCCCGTTGATTTTCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PLGPPLSSLGKGDCRAWRLLGQI*VPLIFS Trigger: AGAGAAAATCAACGGGACCCAGATTTGCCCCAACAA...TCGCCAAGCCCTGCAATCTCCCTTACCCAAACTTGACAATGGAGGGCCAAGAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATAGGCCACTAGGTTGTTaGGGCAAATCTGGGTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: PGKASVKLASLRLSKTSHRPLGC*GKSGSR Trigger: ACGGGACCCAGATTTGCCCCAACAACCTAGTGGCCT...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR GCA 90 bp | CTCTGCTGTGAAGCTTGCTGGAATGCGGACGCTGTATCAGAGTTAACATGGTCTCTCTCTGGTCCACCTTaGGAATTCGGTTGTTGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LCCEACWNADAVSELTWSLSGPP*EFGCCP Trigger: TGGACAACAACCGAATTCGCAAGGTGGACCAGAGAG...AGACCATGTTAACTCTGATACAGCGTCCGCATTCCAGCAAGCTTCACAGCAGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | TTTCTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTGGCAGGGTGTTTTCTCAGGATGTTGTaGGCTAGATTGAGCTGCATG | + |
|
Preference number: 4 (lower is better) Translates to: FLKQRETKEEQRSWLAGCFLRML*ARLSCM Trigger: CATGCAGCTCAATCTAGCCCACAACATCCTGAGAAA...ACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CCA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATCATCATGAGGTCCAGTaGGATGGGAGGCTTCAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: PGKASVKLASLRLSKTSHHHEVQ*DGRLQK Trigger: TTTCTGAAGCCTCCCATCCCACTGGACCTCATGATG...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| 3UTR CAA 72 bp | ACTAGGGTGAGGAAGTTGCACAGCAGGGAAAAGAGGTaGTGTGAAGTGGGCTCTATTTTCAATGCGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRVRKLHSREKR*CEVGSIFNARK Trigger: CTTTCTCGCATTGAAAATAGAGCCCACTTCACACAACCTCTTTTCCCTGCTGTGCAACTTCCTCACCCTAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR TCA 90 bp | TGTATCAGAGTTAACATGGTCTTTTGGAGAATAGATAAGATGTACAGGGTGAGAGCGGGATCCTGGAAATaGGGTTCTGGCTCAGCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: CIRVNMVFWRIDKMYRVRAGSWK*GSGSAS Trigger: TGAGGCTGAGCCAGAACCTCATTTCCAGGATCCCGC...TCTCACCCTGTACATCTTATCTATTCTCCAAAAGACCATGTTAACTCTGATACA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS CCA 90 bp | TGGAGGGCCGGGAGGAAGAGGTGGAGGCAGGTCTGTCGGCTCTGCTaGCTCGGGGGCCTGAGGAAATCTGGGTGTGGGCCTCGGCTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRAGRKRWRQVCRLC*LGGLRKSGCGPRLG Trigger: CCCAAGCCGAGGCCCACACCCAGATTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGACCTGCCTCCACCTCTTCCTCCCGGCCCTCCA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS TCA 90 bp | GGAAGAGGTGGAGGCAGGTCTGTCGGCTCTGCTGGCTCGGGGGCCTaGGGAAATCTGGGTGTGGGCCTCGGCTTGGGTTTACGCCTAATC | + |
|
Preference number: 5 (lower is better) Translates to: GRGGGRSVGSAGSGA*GNLGVGLGLGLRLI Trigger: GATTAGGCGTAAACCCAAGCCGAGGCCCACACCCAGATTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGACCTGCCTCCACCTCTTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS GCA 90 bp | TGGAAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATTGTGCTaGAGATCCAGGAGCAGCAGGTTCTCCAGCTTGCTGAACACTCCG | + |
|
Preference number: 5 (lower is better) Translates to: WKVSALKTPSLSRLC*RSRSSRFSSLLNTP Trigger: CGGAGTGTTCAGCAAGCTGGAGAACCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCA 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS GCA 90 bp | CCCTGGAAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATTGTaGTGCAGATCCAGGAGCAGCAGGTTCTCCAGCTTGCTGAACACT | + |
|
Preference number: 5 (lower is better) Translates to: PWKVSALKTPSLSRL*CRSRSSRFSSLLNT Trigger: AGTGTTCAGCAAGCTGGAGAACCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CAA 90 bp | GAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTGCTCACCTGGGCTAAGGTGTTCCAGCTTGTaGCTGATGGCCGGCACGTTG | + |
|
Preference number: 5 (lower is better) Translates to: ERQGAQVLGNPPSCSPGLRCSSL*LMAGTL Trigger: CAACGTGCCGGCCATCAGCAACAAGCTGGAACACCT...TAGCCCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CAA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCTGGAAGGTGTCGGCCTaGAAGACGCCGTCGCTCAGC | + |
|
Preference number: 5 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAWKVSA*KTPSLS Trigger: GCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCA...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
||
| CDS-3UTR CAA 90 bp | AAGAGAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTGCTCACCTGGAGCTGCATGAGGTTTTaGAGGCCCTGGAAGGTGTCG | + |
|
Preference number: 5 (lower is better) Translates to: KRKAGSPGSWKPAKLLTWSCMRF*RPWKVS Trigger: CGACACCTTCCAGGGCCTCAAAAACCTCATGCAGCT...CCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTCTCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS TCA 90 bp | GAGGTTCTGGCTCAGCCTCAGCTGTTCCAAGTTCCGGGGCAGAGCTaGTGGCACCTCTTCCAGCTGGTTCTTCTCCATGTAGAGGAATGC | + |
|
Preference number: 5 (lower is better) Translates to: EVLAQPQLFQVPGQS*WHLFQLVLLHVEEC Trigger: GCATTCCTCTACATGGAGAAGAACCAGCTGGAAGAGGTGCCATCAGCTCTGCCCCGGAACTTGGAACAGCTGAGGCTGAGCCAGAACCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 90 bp | AGGATGTTGTGGGCTAGATTGAGCTGCATGAGGTTTTTGAGGCCCTaGAAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: RMLWARLSCMRFLRP*KVSALKTPSLSRLC Trigger: GCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGGCCTCAAAAACCTCATGCAGCTCAATCTAGCCCACAACATCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CATCTGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAAGCAGGTTCTCCAGCTaGCTGAACACTCCGGGCGGG | + |
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Preference number: 5 (lower is better) Translates to: HLSGVRKQWQRTALEGISSRFSS*LNTPGG Trigger: CCCGCCCGGAGTGTTCAGCAAGCTGGAGAACCTGCT...TGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CACCAGCCACCAGATGTCGCTGATGAGTCGGCCTTAGAGGTAGAGGCTAATCCCAGGTTGGGGAAGTCCTaGAAGTACCCGTTGGGGATG | + |
|
Preference number: 5 (lower is better) Translates to: HQPPDVADESALEVEANPRLGKS*KYPLGM Trigger: CATCCCCAACGGGTACTTCAAGGACTTCCCCAACCT...GGGATTAGCCTCTACCTCTAAGGCCGACTCATCAGCGACATCTGGTGGCTGGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | GACTCGTGGTGTGGGGGAAGAGAGGGGATATGTCTGTTGGCGTACACCTGTGTTAAGGCCACTAGGTTGTaGGGGCAAATCTGGGTCCCG | + |
|
Preference number: 5 (lower is better) Translates to: DSWCGGREGICLLAYTCVKATRL*GQIWVP Trigger: CGGGACCCAGATTTGCCCCAACAACCTAGTGGCCTT...AACACAGGTGTACGCCAACAGACATATCCCCTCTCTTCCCCCACACCACGAGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CACTTCCTTTCTGAAGAACTCGAGACAGTAGGGAACAGGGTGACATCTGTCTGGCGGTTGTTGTCCAGGTaGACCCACCTCAGGCCCGTG | + |
|
Preference number: 5 (lower is better) Translates to: HFLSEELETVGNRVTSVWRLLSR*THLRPV Trigger: CACGGGCCTGAGGTGGGTCAACCTGGACAACAACCG...CCAGACAGATGTCACCCTGTTCCCTACTGTCTCGAGTTCTTCAGAAAGGAAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCTTCAGACCGTCGCTCAGCCGATaGTGCTGCAGATCCAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: FTITPDRNEPPASALSFRPSLSR*CCRSRS Trigger: GCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGG...TCTGAAGGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCCGGATGAAGGCCAGGTaGGGGAAGTCCTTGAAGTAC | + |
|
Preference number: 5 (lower is better) Translates to: CLVSGNSGRGQLWKGSQARMKAR*GKSLKY Trigger: GTACTTCAAGGACTTCCCCAACCTGGCCTTCATCCG...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCTTCAGATACAGGTGTTCCAGCTaGTTGCTGATGGCCGGCACG | + |
|
Preference number: 5 (lower is better) Translates to: FTITPDRNEPPASALSFRYRCSS*LLMAGT Trigger: CGTGCCGGCCATCAGCAACAAGCTGGAACACCTGTA...TCTGAAGGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS TCA 90 bp | CAGCAAGTTGGAGATGTTGAAGGAGTTCTTGGGGAGCCCGCGATCTaGCAGTTTGTTGTAGTTCATGCGGATGAAGGCCAGGTTGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QQVGDVEGVLGEPAI*QFVVVHADEGQVGE Trigger: TTCCCCAACCTGGCCTTCATCCGCATGAACTACAACAAACTGTCAGATCGCGGGCTCCCCAAGAACTCCTTCAACATCTCCAACTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 90 bp | CTCAGTGATGAAGTTGTTCTGCAAGTAAAGGTAATGGATTCGGGGTaGGATGACGGGGACCCTTCGCAGGTTTCGGCTGTCACAGTAGAG | + |
|
Preference number: 5 (lower is better) Translates to: LSDEVVLQVKVMDSG*DDGDPSQVSAVTVE Trigger: CTCTACTGTGACAGCCGAAACCTGCGAAGGGTCCCCGTCATCCCACCCCGAATCCATTACCTTTACTTGCAGAACAACTTCATCACTGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 90 bp | ATTCGGTTGTTGTCCAGGTTGACCCACCTCAGGCCCGTGGCATTCTaGAAAGATTCCAGAGGAAGCTCAGTGATGAAGTTGTTCTGCAAG | + |
|
Preference number: 5 (lower is better) Translates to: IRLLSRLTHLRPVAF*KDSRGSSVMKLFCK Trigger: CTTGCAGAACAACTTCATCACTGAGCTTCCTCTGGAATCTTTCCAGAATGCCACGGGCCTGAGGTGGGTCAACCTGGACAACAACCGAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCTTCAGAACTCTCTGGTCCACCTaGCGAATTCGGTTGTTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: FTITPDRNEPPASALSFRTLWST*RIRLLS Trigger: GGACAACAACCGAATTCGCAAGGTGGACCAGAGAGT...TCTGAAGGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TGTCTGGTGTCAGGAAACAGTGGCAGAGGACAGCTTTGGAAGGGATCTCAGGCCATGTTGTGGGCTAGATaGAGCTGCATGAGGTTTTTG | + |
|
Preference number: 5 (lower is better) Translates to: CLVSGNSGRGQLWKGSQAMLWAR*SCMRFL Trigger: CAAAAACCTCATGCAGCTCAATCTAGCCCACAACAT...GGCCTGAGATCCCTTCCAAAGCTGTCCTCTGCCACTGTTTCCTGACACCAGACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGTCCTTGAAGTACCCGTaGGGGATGGTCTCGATCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CKASLTLVPLADGCREQWSLKYP*GMVSIL Trigger: CAAGATCGAGACCATCCCCAACGGGTACTTCAAGGA...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATATGTTGAAGGAGTTCTaGGGGAGCCCGCGATCTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PGKASVKLASLRLSKTSHMLKEF*GSPRSD Trigger: GTCAGATCGCGGGCTCCCCAAGAACTCCTTCAACAT...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATACCTTGCGAATTCGGTaGTTGTCCAGGTTGACCCAC | + |
|
Preference number: 5 (lower is better) Translates to: PGKASVKLASLRLSKTSHTLRIR*LSRLTH Trigger: GTGGGTCAACCTGGACAACAACCGAATTCGCAAGGT...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | AAGAGAAAGGCAGGGAGCCCAGGTTCTTGGAAACCCGCCAAGCTGCTCACCTGGATTTTCTCTATGCTATaGTTGTTGAGGTACAGGTGT | + |
|
Preference number: 5 (lower is better) Translates to: KRKAGSPGSWKPAKLLTWIFSML*LLRYRC Trigger: ACACCTGTACCTCAACAACAATAGCATAGAGAAAAT...CCAGGTGAGCAGCTTGGCGGGTTTCCAAGAACCTGGGCTCCCTGCCTTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TTCTCATTCACAATCACTCCTGATAGGAATGAACCCCCAGCCTCTGCCCTTTCCATCTTTCTCAGGATGTaGTGGGCTAGATTGAGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSFTITPDRNEPPASALSIFLRM*WARLSC Trigger: GCAGCTCAATCTAGCCCACAACATCCTGAGAAAGAT...GGAAAGGGCAGAGGCTGGGGGTTCATTCCTATCAGGAGTGATTGTGAATGAGAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TTTCTGAAGCAAAGGGAGACCAAAGAAGAGCAGAGGTCTTGGCTGGCAGGGTGTTTCTCTATGCTATTGTaGTTGAGGTACAGGTGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: FLKQRETKEEQRSWLAGCFSMLL*LRYRCS Trigger: GGAACACCTGTACCTCAACAACAATAGCATAGAGAA...ACACCCTGCCAGCCAAGACCTCTGCTCTTCTTTGGTCTCCCTTTGCTTCAGAAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | CCTGGCAAGGCCTCTGTCAAACTAGCTTCCCTTAGACTCTCAAAGACTTCTCATTCTATGCTATTGTTGTaGAGGTACAGGTGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: PGKASVKLASLRLSKTSHSMLLL*RYRCSS Trigger: GCTGGAACACCTGTACCTCAACAACAATAGCATAGA...ATGAGAAGTCTTTGAGAGTCTAAGGGAAGCTAGTTTGACAGAGGCCTTGCCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS-3UTR CAA 90 bp | TGTAAAGCCAGTTTAACTCTTGTCCCTCTAGCTGATGGCTGCAGAGAGCAGTGGCAAATCTGGGTCCCGTaGATTTTCTCTATGCTATTG | + |
|
Preference number: 5 (lower is better) Translates to: CKASLTLVPLADGCREQWQIWVP*IFSMLL Trigger: CAATAGCATAGAGAAAATCAACGGGACCCAGATTTG...CCACTGCTCTCTGCAGCCATCAGCTAGAGGGACAAGAGTTAAACTGGCTTTACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS GCA 72 bp | GCCGGGAGGAAGAGGTGGAGGCAGGTCTGTCGGCTCTaGTGGCTCGGGGGCCTGAGGAAATCTGGGTGTGGG | + |
|
Preference number: 6 (lower is better) Translates to: AGRKRWRQVCRL*WLGGLRKSGCG Trigger: CCCACACCCAGATTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGACCTGCCTCCACCTCTTCCTCCCGGC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 72 bp | GGGAGGAAGAGGTGGAGGCAGGTCTGTCGGCTCTGCTaGCTCGGGGGCCTGAGGAAATCTGGGTGTGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRKRWRQVCRLC*LGGLRKSGCGP Trigger: AGGCCCACACCCAGATTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGACCTGCCTCCACCTCTTCCTCCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS TCA 72 bp | GGAGGCAGGTCTGTCGGCTCTGCTGGCTCGGGGGCCTaGGGAAATCTGGGTGTGGGCCTCGGCTTGGGTTTA | + |
|
Preference number: 6 (lower is better) Translates to: GGRSVGSAGSGA*GNLGVGLGLGL Trigger: TAAACCCAAGCCGAGGCCCACACCCAGATTTCCTCAGGCCCCCGAGCCAGCAGAGCCGACAGACCTGCCTCC 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 90 bp | AGGAATGCCAGGCTGGGGAGCTTCCCCAGCACTCTCTGGTCCACCTaGCGAATTCGGTTGTTGTCCAGGTTGACCCACCTCAGGCCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: RNARLGSFPSTLWST*RIRLLSRLTHLRPV Trigger: CACGGGCCTGAGGTGGGTCAACCTGGACAACAACCGAATTCGCAAGGTGGACCAGAGAGTGCTGGGGAAGCTCCCCAGCCTGGCATTCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 90 bp | AGGCCCTGGAAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATaGTGCTGCAGATCCAGGAGCAGCAGGTTCTCCAGCTTGCTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: RPWKVSALKTPSLSR*CCRSRSSRFSSLLN Trigger: GTTCAGCAAGCTGGAGAACCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGGCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS GCA 72 bp | GTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATTGTaGTGCAGATCCAGGAGCAGCAGGTTCTCCAGCTTG | + |
|
Preference number: 6 (lower is better) Translates to: VSALKTPSLSRL*CRSRSSRFSSL Trigger: CAAGCTGGAGAACCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | AAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGCCGATaGTGCTGCAGATCCAGGAGCAGCAGGTTCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: KVSALKTPSLSR*CCRSRSSRFSS Trigger: GCTGGAGAACCTGCTGCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTT 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | AGGCTGGGGAGCTTCCCCAGCACTCTCTGGTCCACCTaGCGAATTCGGTTGTTGTCCAGGTTGACCCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: RLGSFPSTLWST*RIRLLSRLTHL Trigger: GAGGTGGGTCAACCTGGACAACAACCGAATTCGCAAGGTGGACCAGAGAGTGCTGGGGAAGCTCCCCAGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 90 bp | AGATTGAGCTGCATGAGGTTTTTGAGGCCCTGGAAGGTGTCGGCCTaGAAGACGCCGTCGCTCAGCCGATTGTGCTGCAGATCCAGGAGC | + |
|
Preference number: 6 (lower is better) Translates to: RLSCMRFLRPWKVSA*KTPSLSRLCCRSRS Trigger: GCTCCTGGATCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGGCCTCAAAAACCTCATGCAGCTCAATCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS GCA 72 bp | CACCTCTTCCAGCTGGTTCTTCTCCATGTAGAGGAATaGCAGGCTGGGGAGCTTCCCCAGCACTCTCTGGTC | + |
|
Preference number: 6 (lower is better) Translates to: HLFQLVLLHVEE*QAGELPQHSLV Trigger: GACCAGAGAGTGCTGGGGAAGCTCCCCAGCCTGGCATTCCTCTACATGGAGAAGAACCAGCTGGAAGAGGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 72 bp | TGGGCTAGATTGAGCTGCATGAGGTTTTTGAGGCCCTaGAAGGTGTCGGCCTTGAAGACGCCGTCGCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: WARLSCMRFLRP*KVSALKTPSLS Trigger: GCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGGCCTCAAAAACCTCATGCAGCTCAATCTAGCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | TGCATGAGGTTTTTGAGGCCCTGGAAGGTGTCGGCCTaGAAGACGCCGTCGCTCAGCCGATTGTGCTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CMRFLRPWKVSA*KTPSLSRLCCR Trigger: TCTGCAGCACAATCGGCTGAGCGACGGCGTCTTCAAGGCCGACACCTTCCAGGGCCTCAAAAACCTCATGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 90 bp | CCCAGCACTCTCTGGTCCACCTTGCGAATTCGGTTGTTGTCCAGGTaGACCCACCTCAGGCCCGTGGCATTCTGGAAAGATTCCAGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: PSTLWSTLRIRLLSR*THLRPVAFWKDSRG Trigger: TCCTCTGGAATCTTTCCAGAATGCCACGGGCCTGAGGTGGGTCAACCTGGACAACAACCGAATTCGCAAGGTGGACCAGAGAGTGCTGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | CTCTGGTCCACCTTGCGAATTCGGTTGTTGTCCAGGTaGACCCACCTCAGGCCCGTGGCATTCTGGAAAGAT | + |
|
Preference number: 6 (lower is better) Translates to: LWSTLRIRLLSR*THLRPVAFWKD Trigger: ATCTTTCCAGAATGCCACGGGCCTGAGGTGGGTCAACCTGGACAACAACCGAATTCGCAAGGTGGACCAGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS TCA 72 bp | TGTGAGACAGGTGGAGCACCAGCAAGTTGGAGATGTTaGAGGAGTTCTTGGGGAGCCCGCGATCTGACAGTT | + |
|
Preference number: 6 (lower is better) Translates to: CETGGAPASWRC*RSSWGARDLTV Trigger: AACTGTCAGATCGCGGGCTCCCCAAGAACTCCTTCAACATCTCCAACTTGCTGGTGCTCCACCTGTCTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS GCA 72 bp | GGCATCTTTCTCAGGATGTTGTGGGCTAGATTGAGCTaGATGAGGTTTTTGAGGCCCTGGAAGGTGTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: GIFLRMLWARLS*MRFLRPWKVSA Trigger: GGCCGACACCTTCCAGGGCCTCAAAAACCTCATGCAGCTCAATCTAGCCCACAACATCCTGAGAAAGATGCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 72 bp | GAAGTTGTTCTGCAAGTAAAGGTAATGGATTCGGGGTaGGATGACGGGGACCCTTCGCAGGTTTCGGCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: EVVLQVKVMDSG*DDGDPSQVSAV Trigger: GACAGCCGAAACCTGCGAAGGGTCCCCGTCATCCCACCCCGAATCCATTACCTTTACTTGCAGAACAACTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CCA 72 bp | TATCCAGGTAGAGCTGGTGGATGGCTTGGGGGACTTTaGGGGGCATCTTTCTCAGGATGTTGTGGGCTAGAT | + |
|
Preference number: 6 (lower is better) Translates to: YPGRAGGWLGGL*GASFSGCCGLD Trigger: ATCTAGCCCACAACATCCTGAGAAAGATGCCCCCCAAAGTCCCCCAAGCCATCCACCAGCTCTACCTGGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS TCA 72 bp | GGAGATGTTGAAGGAGTTCTTGGGGAGCCCGCGATCTaGCAGTTTGTTGTAGTTCATGCGGATGAAGGCCAG | + |
|
Preference number: 6 (lower is better) Translates to: GDVEGVLGEPAI*QFVVVHADEGQ Trigger: CTGGCCTTCATCCGCATGAACTACAACAAACTGTCAGATCGCGGGCTCCCCAAGAACTCCTTCAACATCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | AGATCCGAGGAGAAGTCATGGAAGGCCACTAGGTTGTaGGGGCAAATCTGGGTCCCGTTGATTTTCTCTATG | + |
|
Preference number: 6 (lower is better) Translates to: RSEEKSWKATRL*GQIWVPLIFSM Trigger: CATAGAGAAAATCAACGGGACCCAGATTTGCCCCAACAACCTAGTGGCCTTCCATGACTTCTCCTCGGATCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | TCTATGCTATTGTTGTTGAGGTACAGGTGTTCCAGCTaGTTGCTGATGGCCGGCACGTTGCTGATCTTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: SMLLLLRYRCSS*LLMAGTLLILL Trigger: CAACAAGATCAGCAACGTGCCGGCCATCAGCAACAAGCTGGAACACCTGTACCTCAACAACAATAGCATAGA 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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| CDS CAA 72 bp | ATCTGGGTCCCGTTGATTTTCTCTATGCTATTGTTGTaGAGGTACAGGTGTTCCAGCTTGTTGCTGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: IWVPLIFSMLLL*RYRCSSLLLMA Trigger: GGCCATCAGCAACAAGCTGGAACACCTGTACCTCAACAACAATAGCATAGAGAAAATCAACGGGACCCAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048432.6 |
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