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Pregenerated sensors for PRELID1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021486

Ensembl transcript IDs: ENSMUST00000021942.8

Found 15 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp TGCACCCCTCTGCCCGGCAGACAGAGCTGGGTGTGGTGCAGATGCTaGCCAGGACAGGGCCCTGACCCACCACCCCAGACAGCAGAGAGG +
Preference number: 1 (lower is better)
Translates to: CTPLPGRQSWVWCRC*PGQGPDPPPQTAER
Trigger: CCTCTCTGCTGTCTGGGGTGGTGGGTCAGGGCCCTGTCCTGGTCAGCATCTGCACCACACCCAGCTCTGTCTGCCGGGCAGAGGGGTGCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR GCA 90 bp TCACCTGCGCACTGCTGTGACCTTGGGCAAGTCACTGCACCCCTCTaGCCGGCAGACAGAGCTGGGTGTGGTGCAGATGCTGACCAGGAC +
Preference number: 1 (lower is better)
Translates to: SPAHCCDLGQVTAPL*PADRAGCGADADQD
Trigger: GTCCTGGTCAGCATCTGCACCACACCCAGCTCTGTCTGCCGGGCAGAGGGGTGCAGTGACTTGCCCAAGGTCACAGCAGTGCGCAGGTGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR TCA 90 bp CAGACAGAGCTGGGTGTGGTGCAGATGCTGACCAGGACAGGGCCCTaGCCCACCACCCCAGACAGCAGAGAGGGCTGCAGGTTGCTCTTT +
Preference number: 1 (lower is better)
Translates to: QTELGVVQMLTRTGP*PTTPDSREGCRLLF
Trigger: AAAGAGCAACCTGCAGCCCTCTCTGCTGTCTGGGGTGGTGGGTCAGGGCCCTGTCCTGGTCAGCATCTGCACCACACCCAGCTCTGTCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR GCA 90 bp AAGGAGCCCTGCCCTCTTGGAGCGTACAGTCTATCACCTGCGCACTaGTGTGACCTTGGGCAAGTCACTGCACCCCTCTGCCCGGCAGAC +
Preference number: 1 (lower is better)
Translates to: KEPCPLGAYSLSPAH*CDLGQVTAPLCPAD
Trigger: GTCTGCCGGGCAGAGGGGTGCAGTGACTTGCCCAAGGTCACAGCAGTGCGCAGGTGATAGACTGTACGCTCCAAGAGGGCAGGGCTCCTT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR-3UTR TCA 90 bp GCGTACAGTCTATCACCTGCGCACTGCTGTGACCTTGGGCAAGTCACTGCACCCACCAGGACAGGGCCCTaGCCCACCACCCCAGACAGC +
Preference number: 2 (lower is better)
Translates to: AYSLSPAHCCDLGQVTAPTRTGP*PTTPDS
Trigger: GCTGTCTGGGGTGGTGGGTCAGGGCCCTGTCCTGGT...GGGTGCAGTGACTTGCCCAAGGTCACAGCAGTGCGCAGGTGATAGACTGTACGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR-3UTR CCA 90 bp CCTTGGGCAAGTCACTGCACCCCTCTGCCCGGCAGACAGAGCTGGGTGTGGTGCAATAATCACGTACACTaGGGAGAGGGAGAGGAAGCG +
Preference number: 2 (lower is better)
Translates to: PWASHCTPLPGRQSWVWCNNHVH*GEGEEA
Trigger: CGCTTCCTCTCCCTCTCCCCAGTGTACGTGATTATT...GCACCACACCCAGCTCTGTCTGCCGGGCAGAGGGGTGCAGTGACTTGCCCAAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR-3UTR TCA 90 bp AGGGTACTTGGGACACAGCAGAGAATAAAACAAGGAGCCCTGCCCTCTTGGAGCGTGTGGTGCAGATGCTaGCCAGGACAGGGCCCTGAC +
Preference number: 2 (lower is better)
Translates to: RVLGTQQRIKQGALPSWSVWCRC*PGQGPD
Trigger: GTCAGGGCCCTGTCCTGGTCAGCATCTGCACCACAC...GCTCCAAGAGGGCAGGGCTCCTTGTTTTATTCTCTGCTGTGTCCCAAGTACCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR TCA 72 bp CTGGGTGTGGTGCAGATGCTGACCAGGACAGGGCCCTaGCCCACCACCCCAGACAGCAGAGAGGGCTGCAGG +
Preference number: 3 (lower is better)
Translates to: LGVVQMLTRTGP*PTTPDSREGCR
Trigger: CCTGCAGCCCTCTCTGCTGTCTGGGGTGGTGGGTCAGGGCCCTGTCCTGGTCAGCATCTGCACCACACCCAG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR TCA 72 bp TCTTGGAGCGTACAGTCTATCACCTGCGCACTGCTGTaGCCTTGGGCAAGTCACTGCACCCCTCTGCCCGGC +
Preference number: 3 (lower is better)
Translates to: SWSVQSITCALL*PWASHCTPLPG
Trigger: GCCGGGCAGAGGGGTGCAGTGACTTGCCCAAGGTCACAGCAGTGCGCAGGTGATAGACTGTACGCTCCAAGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
CDS-3UTR GCA 90 bp CAAGTCACTGCACCCCTCTGCCCGGCAGACAGAGCTGGGTGTGGTGCAGATGCTAGCTGCCGCTGCTGCTaGTTGGTGGCGGCCTTGTTG +
Preference number: 4 (lower is better)
Translates to: QVTAPLCPADRAGCGADASCRCC*LVAALL
Trigger: CAACAAGGCCGCCACCAAGCAGCAGCAGCGGCAGCT...AGCATCTGCACCACACCCAGCTCTGTCTGCCGGGCAGAGGGGTGCAGTGACTTG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
CDS-3UTR GCA 90 bp GGGCAAGTCACTGCACCCCTCTGCCCGGCAGACAGAGCTGGGTGTGGTGCAGATCAGTGCGGTCTCCTTTaGTTTCTCTTTGGCCTCTTT +
Preference number: 4 (lower is better)
Translates to: GQVTAPLCPADRAGCGADQCGLL*FLFGLF
Trigger: AAAGAGGCCAAAGAGAAAGCAAAGGAGACCGCACTG...ATCTGCACCACACCCAGCTCTGTCTGCCGGGCAGAGGGGTGCAGTGACTTGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
CDS-3UTR CCA 90 bp AATATTGTTCAGGGTACTTGGGACACAGCAGAGAATAAAACAAGGAGCCCTGCCGCCGCTGCTGCTGCTTaGTGGCGGCCTTGTTGGCCA +
Preference number: 4 (lower is better)
Translates to: NIVQGTWDTAENKTRSPAAAAAA*WRPCWP
Trigger: TGGCCAACAAGGCCGCCACCAAGCAGCAGCAGCGGC...GGCAGGGCTCCTTGTTTTATTCTCTGCTGTGTCCCAAGTACCCTGAACAATATT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
3UTR CAA 72 bp GACACAGCAGAGAATAAAACAAGGAGCCCTGCCCTCTaGGAGCGTACAGTCTATCACCTGCGCACTGCTGTG +
Preference number: 4 (lower is better)
Translates to: DTAENKTRSPAL*ERTVYHLRTAV
Trigger: CACAGCAGTGCGCAGGTGATAGACTGTACGCTCCAAGAGGGCAGGGCTCCTTGTTTTATTCTCTGCTGTGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
CDS-3UTR CCA 90 bp CAGGGTACTTGGGACACAGCAGAGAATAAAACAAGGAGCCCTGCCCTCTTGGAGCCTCACCTTGTAGCTTaGCCAGGATGTATTCAAAGC +
Preference number: 4 (lower is better)
Translates to: QGTWDTAENKTRSPALLEPHLVA*PGCIQS
Trigger: GCTTTGAATACATCCTGGCCAAGCTACAAGGTGAGG...CTCCAAGAGGGCAGGGCTCCTTGTTTTATTCTCTGCTGTGTCCCAAGTACCCTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8
CDS-3UTR CAA 90 bp ACAGCAGAGAGGGCTGCAGGTTGCTCTTTAATAATCACGTACACTGGGGAGAGGTGCCGCTGCTGCTGCTaGGTGGCGGCCTTGTTGGCC +
Preference number: 5 (lower is better)
Translates to: TAERAAGCSLIITYTGERCRCCC*VAALLA
Trigger: GGCCAACAAGGCCGCCACCAAGCAGCAGCAGCGGCA...CCTCTCCCCAGTGTACGTGATTATTAAAGAGCAACCTGCAGCCCTCTCTGCTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021942.8