RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDX6B (Mus musculus)

Ensembl gene IDs: ENSMUSG00000050114

Ensembl transcript IDs: ENSMUST00000057072.6

Found 39 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp TATAAGACCGGCTGTGATCATGTCACAGACTTTCTACGTAACTGCTaGAAGGACCCACCGCTGTCGGCTGACACCCTCAGGTCCCAGTGC +
Preference number: 1 (lower is better)
Translates to: YKTGCDHVTDFLRNC*KDPPLSADTLRSQC
Trigger: GCACTGGGACCTGAGGGTGTCAGCCGACAGCGGTGGGTCCTTGCAGCAGTTACGTAGAAAGTCTGTGACATGATCACAGCCGGTCTTATA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 90 bp ATCTATAAGACCGGCTGTGATCATGTCACAGACTTTCTACGTAACTaGTGCAAGGACCCACCGCTGTCGGCTGACACCCTCAGGTCCCAG +
Preference number: 1 (lower is better)
Translates to: IYKTGCDHVTDFLRN*CKDPPLSADTLRSQ
Trigger: CTGGGACCTGAGGGTGTCAGCCGACAGCGGTGGGTCCTTGCAGCAGTTACGTAGAAAGTCTGTGACATGATCACAGCCGGTCTTATAGAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR TCA 90 bp AGGTTTTGGTGCCATTTCCATTTAATGACCCAGGAGTATAGCAAGTaGTCTATAAGACCGGCTGTGATCATGTCACAGACTTTCTACGTA +
Preference number: 1 (lower is better)
Translates to: RFWCHFHLMTQEYSK*SIRPAVIMSQTFYV
Trigger: TACGTAGAAAGTCTGTGACATGATCACAGCCGGTCTTATAGATCACTTGCTATACTCCTGGGTCATTAAATGGAAATGGCACCAAAACCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR TCA 90 bp AGAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATaGGTGTATTTAAGAGATGAAATCAGTTGGGAATTATTAAGGTTA +
Preference number: 1 (lower is better)
Translates to: RSLDAKHIVFPHSPA*VYLRDEISWELLRL
Trigger: TAACCTTAATAATTCCCAACTGATTTCATCTCTTAAATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTCT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR GCA 90 bp CAGACATCACCAGAGAGCAAATGTGGAAACTCCAGGAGGTACATGCGCACTCTGGGTCCCAGTGCTGGGTaGGCAGATGCAGCCCCAATT +
Preference number: 2 (lower is better)
Translates to: QTSPESKCGNSRRYMRTLGPSAG*ADAAPI
Trigger: AATTGGGGCTGCATCTGCGCACCCAGCACTGGGACC...CAGAGTGCGCATGTACCTCCTGGAGTTTCCACATTTGCTCTCTGGTGATGTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR TCA 90 bp TCCTCTCTAATGACTGTGAAGACCTGGCAGGCATGTCCAATTTTCCTGATCCCCGAAAACCAGTCAGTATaGCGCTGTGATAGGCGGAGG +
Preference number: 2 (lower is better)
Translates to: SSLMTVKTWQACPIFLIPENQSV*RCDRRR
Trigger: CCTCCGCCTATCACAGCGTCATACTGACTGGTTTTC...GGGGATCAGGAAAATTGGACATGCCTGCCAGGTCTTCACAGTCATTAGAGAGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR GCA 90 bp CTGGGAGGCGAAAGGCTTTCTGAGCCCATTTTGATAGAAACTTACAATGGATTCCCCACACTGACCACCTaGAGAGACCTAAGGAATTGT +
Preference number: 2 (lower is better)
Translates to: LGGERLSEPILIETYNGFPTLTT*RDLRNC
Trigger: ACAATTCCTTAGGTCTCTGCAGGTGGTCAGTGTGGG...GAATCCATTGTAAGTTTCTATCAAAATGGGCTCAGAAAGCCTTTCGCCTCCCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR GCA 90 bp TCCTCTCTAATGACTGTGAAGACCTGGCAGGCATGTCCAATTTTCCTGATCCCCGCTAGTGTATCATTTTaGAAATGTACCTGTGTTTGC +
Preference number: 2 (lower is better)
Translates to: SSLMTVKTWQACPIFLIPASVSF*KCTCVC
Trigger: GCAAACACAGGTACATTTGCAAAATGATACACTAGC...GGGGATCAGGAAAATTGGACATGCCTGCCAGGTCTTCACAGTCATTAGAGAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR GCA 90 bp CTGGGAGGCGAAAGGCTTTCTGAGCCCATTTTGATAGAAACTTACAATGGATTCCAGAGAAGGTTTTGGTaGCATTTCCATTTAATGACC +
Preference number: 2 (lower is better)
Translates to: LGGERLSEPILIETYNGFQRRFW*HFHLMT
Trigger: GGTCATTAAATGGAAATGGCACCAAAACCTTCTCTG...GAATCCATTGTAAGTTTCTATCAAAATGGGCTCAGAAAGCCTTTCGCCTCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR CCA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTAACAGAATGGTTGGGTaGATAAAAGTGCTTACCACA +
Preference number: 2 (lower is better)
Translates to: EVSMPNTLCSHILLHECINRMVG*IKVLTT
Trigger: TGTGGTAAGCACTTTTATCCACCCAACCATTCTGTT...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR CCA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTCCGAAGCAATTTTCCTaGCTGTTCCCATTTTATTTA +
Preference number: 2 (lower is better)
Translates to: EVSMPNTLCSHILLHECIPKQFS*LFPFYL
Trigger: TAAATAAAATGGGAACAGCCAGGAAAATTGCTTCGG...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp GACCCACCGCTGTCGGCTGACACCCTCAGGTCCCAGTaGTGGGTGCGCAGATGCAGCCCCAATTCCTGCAAA +
Preference number: 3 (lower is better)
Translates to: DPPLSADTLRSQ*WVRRCSPNSCK
Trigger: TTTGCAGGAATTGGGGCTGCATCTGCGCACCCAGCACTGGGACCTGAGGGTGTCAGCCGACAGCGGTGGGTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp GGCTGTGATCATGTCACAGACTTTCTACGTAACTGCTaGAAGGACCCACCGCTGTCGGCTGACACCCTCAGG +
Preference number: 3 (lower is better)
Translates to: GCDHVTDFLRNC*KDPPLSADTLR
Trigger: CCTGAGGGTGTCAGCCGACAGCGGTGGGTCCTTGCAGCAGTTACGTAGAAAGTCTGTGACATGATCACAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp ACCGGCTGTGATCATGTCACAGACTTTCTACGTAACTaGTGCAAGGACCCACCGCTGTCGGCTGACACCCTC +
Preference number: 3 (lower is better)
Translates to: TGCDHVTDFLRN*CKDPPLSADTL
Trigger: GAGGGTGTCAGCCGACAGCGGTGGGTCCTTGCAGCAGTTACGTAGAAAGTCTGTGACATGATCACAGCCGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp CACCAGAGAGCAAATGTGGAAACTCCAGGAGGTACATaGGCACTCTGGGAGGCGAAAGGCTTTCTGAGCCCA +
Preference number: 3 (lower is better)
Translates to: HQRANVETPGGT*ALWEAKGFLSP
Trigger: TGGGCTCAGAAAGCCTTTCGCCTCCCAGAGTGCGCATGTACCTCCTGGAGTTTCCACATTTGCTCTCTGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR CCA 72 bp GTGCGTTCACACGCAGACATCACCAGAGAGCAAATGTaGAAACTCCAGGAGGTACATGCGCACTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: VRSHADITREQM*KLQEVHAHSGR
Trigger: CCTCCCAGAGTGCGCATGTACCTCCTGGAGTTTCCACATTTGCTCTCTGGTGATGTCTGCGTGTGAACGCAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR CCA 72 bp CAGTATGACGCTGTGATAGGCGGAGGGGCAAAATGCTaGCGAAGGCACAGAGTAAAGAGAGGCACAGAGAAG +
Preference number: 3 (lower is better)
Translates to: QYDAVIGGGAKC*RRHRVKRGTEK
Trigger: CTTCTCTGTGCCTCTCTTTACTCTGTGCCTTCGCCAGCATTTTGCCCCTCCGCCTATCACAGCGTCATACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR TCA 72 bp GAGGTACATGCGCACTCTGGGAGGCGAAAGGCTTTCTaGGCCCATTTTGATAGAAACTTACAATGGATTCCC +
Preference number: 3 (lower is better)
Translates to: EVHAHSGRRKAF*AHFDRNLQWIP
Trigger: GGGAATCCATTGTAAGTTTCTATCAAAATGGGCTCAGAAAGCCTTTCGCCTCCCAGAGTGCGCATGTACCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR-3UTR CAA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTCCCACTACTAGGGCATaGAGTGGTAAAACATTGTCA +
Preference number: 3 (lower is better)
Translates to: EVSMPNTLCSHILLHECIPTTRA*SGKTLS
Trigger: TGACAATGTTTTACCACTCAATGCCCTAGTAGTGGG...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp TTTAACCATTCTAGCACGGAGCCCACACTGACCACCTaGAGAGACCTAAGGAATTGTCAGTATACAATTTTT +
Preference number: 3 (lower is better)
Translates to: FNHSSTEPTLTT*RDLRNCQYTIF
Trigger: AAAAATTGTATACTGACAATTCCTTAGGTCTCTGCAGGTGGTCAGTGTGGGCTCCGTGCTAGAATGGTTAAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
3UTR GCA 72 bp CAAATGTCTGTATTCCTTGCAAACAAGAAGTCTCGATaGCAAACACATTGTGTTCCCACATTCTCCTGCATG +
Preference number: 3 (lower is better)
Translates to: QMSVFLANKKSR*QTHCVPTFSCM
Trigger: CATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTCTTGTTTGCAAGGAATACAGACATTTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR TCA 90 bp ACCCACCGCTGTCGGCTGACACCCTCAGGTCCCAGTGCTGGGTGCGCAGATGCAAAAGAGCATGCCCCATaGATTTCCCAGGAAATCGTG +
Preference number: 4 (lower is better)
Translates to: THRCRLTPSGPSAGCADAKEHAP*ISQEIV
Trigger: CACGATTTCCTGGGAAATTCATGGGGCATGCTCTTT...TGCATCTGCGCACCCAGCACTGGGACCTGAGGGTGTCAGCCGACAGCGGTGGGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR GCA 90 bp GACCCACCGCTGTCGGCTGACACCCTCAGGTCCCAGTGCTGGGTGCGCAGATGCCTTTTCTTTGGGTGTTaGACCATTGTAAGCATTGAT +
Preference number: 4 (lower is better)
Translates to: DPPLSADTLRSQCWVRRCLFFGC*TIVSID
Trigger: ATCAATGCTTACAATGGTGCAACACCCAAAGAAAAG...GCATCTGCGCACCCAGCACTGGGACCTGAGGGTGTCAGCCGACAGCGGTGGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR GCA 90 bp AACCATTCTAGCACGGAGCCCACACTGACCACCTGCAGAGACCTAAGGAATTGTGGTGGGAAAAGAGCATaGCCCATGAATTTCCCAGGA +
Preference number: 4 (lower is better)
Translates to: NHSSTEPTLTTCRDLRNCGGKRA*PMNFPG
Trigger: TCCTGGGAAATTCATGGGGCATGCTCTTTTCCCACC...ACAATTCCTTAGGTCTCTGCAGGTGGTCAGTGTGGGCTCCGTGCTAGAATGGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CCA 90 bp GACATCACCAGAGAGCAAATGTGGAAACTCCAGGAGGTACATGCGCACTCTGGGGTAAAGTCCTTTGGGTaGGAAAAGAGCATGCCCCAT +
Preference number: 4 (lower is better)
Translates to: DITREQMWKLQEVHAHSGVKSFG*EKSMPH
Trigger: ATGGGGCATGCTCTTTTCCCACCCAAAGGACTTTAC...CCCAGAGTGCGCATGTACCTCCTGGAGTTTCCACATTTGCTCTCTGGTGATGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR GCA 90 bp GACATCACCAGAGAGCAAATGTGGAAACTCCAGGAGGTACATGCGCACTCTGGGCTACTGGATCCAACATaGAGAAAAGGATGGAAATGT +
Preference number: 4 (lower is better)
Translates to: DITREQMWKLQEVHAHSGLLDPT*RKGWKC
Trigger: ACATTTCCATCCTTTTCTGCATGTTGGATCCAGTAG...CCCAGAGTGCGCATGTACCTCCTGGAGTTTCCACATTTGCTCTCTGGTGATGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CCA 90 bp TCCTCTCTAATGACTGTGAAGACCTGGCAGGCATGTCCAATTTTCCTGATCCCCAGCATCCTTCTCTACTaGATCCAACATGCAGAAAAG +
Preference number: 4 (lower is better)
Translates to: SSLMTVKTWQACPIFLIPSILLY*IQHAEK
Trigger: CTTTTCTGCATGTTGGATCCAGTAGAGAAGGATGCT...GGGGATCAGGAAAATTGGACATGCCTGCCAGGTCTTCACAGTCATTAGAGAGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CCA 90 bp TCCTCTCTAATGACTGTGAAGACCTGGCAGGCATGTCCAATTTTCCTGATCCCCACATGCAGAAAAGGATaGAAATGTCCCTGTCCTTAT +
Preference number: 4 (lower is better)
Translates to: SSLMTVKTWQACPIFLIPTCRKG*KCPCPY
Trigger: ATAAGGACAGGGACATTTCCATCCTTTTCTGCATGT...GGGGATCAGGAAAATTGGACATGCCTGCCAGGTCTTCACAGTCATTAGAGAGGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CCA 90 bp GGCAAAATGCTGGCGAAGGCACAGAGTAAAGAGAGGCACAGAGAAGGTTTTGGTATCAATGATGGGAAATaGCAACTTTTCTTTGGGTGT +
Preference number: 4 (lower is better)
Translates to: GKMLAKAQSKERHREGFGINDGK*QLFFGC
Trigger: ACACCCAAAGAAAAGTTGCCATTTCCCATCATTGAT...ACCAAAACCTTCTCTGTGCCTCTCTTTACTCTGTGCCTTCGCCAGCATTTTGCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR TCA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTGAGAGTCAATCACTCTaGGAATCTCATCAAAGTTCC +
Preference number: 4 (lower is better)
Translates to: EVSMPNTLCSHILLHECIESQSL*ESHQSS
Trigger: GGAACTTTGATGAGATTCTCAGAGTGATTGACTCTC...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CCA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTATGGCAACTTTTCTTTaGGTGTTGCACCATTGTAAG +
Preference number: 4 (lower is better)
Translates to: EVSMPNTLCSHILLHECIMATFL*VLHHCK
Trigger: CTTACAATGGTGCAACACCCAAAGAAAAGTTGCCAT...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR TCA 90 bp GAAGTCTCGATGCCAAACACATTGTGTTCCCACATTCTCCTGCATGAGTGTATTCTCAACACTATCTACTaGAAGTGCAATCAACTTAAC +
Preference number: 4 (lower is better)
Translates to: EVSMPNTLCSHILLHECILNTIY*KCNQLN
Trigger: GTTAAGTTGATTGCACTTTCAGTAGATAGTGTTGAG...AATACACTCATGCAGGAGAATGTGGGAACACAATGTGTTTGGCATCGAGACTTC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR TCA 90 bp CTGGGAGGCGAAAGGCTTTCTGAGCCCATTTTGATAGAAACTTACAATGGATTCTGTCCTTATCATCAATaGTGGGAAATGGCAACTTTT +
Preference number: 4 (lower is better)
Translates to: LGGERLSEPILIETYNGFCPYHQ*WEMATF
Trigger: AAAAGTTGCCATTTCCCATCATTGATGATAAGGACA...GAATCCATTGTAAGTTTCTATCAAAATGGGCTCAGAAAGCCTTTCGCCTCCCAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS CCA 90 bp AATTTCCCAGGAAATCGTGGAAGCGGATACGGCCGATGGTGGTATTaGCCTCAAAGTCGGGGGCTTCTTCCCCGAGAAGCAACCCTCCGG +
Preference number: 5 (lower is better)
Translates to: NFPGNRGSGYGRWWY*PQSRGLLPREATLR
Trigger: CCGGAGGGTTGCTTCTCGGGGAAGAAGCCCCCGACTTTGAGGCCAATACCACCATCGGCCGTATCCGCTTCCACGATTTCCTGGGAAATT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS-3UTR CAA 90 bp GGCAAAATGCTGGCGAAGGCACAGAGTAAAGAGAGGCACAGAGAAGGTTTTGGTGGGTGGCAACCGGCTTaGTTTCTGTCAGCTGGAGAG +
Preference number: 5 (lower is better)
Translates to: GKMLAKAQSKERHREGFGGWQPA*FLSAGE
Trigger: CTCTCCAGCTGACAGAAACAAAGCCGGTTGCCACCC...ACCAAAACCTTCTCTGTGCCTCTCTTTACTCTGTGCCTTCGCCAGCATTTTGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS TCA 90 bp CCAACATGCAGAAAAGGATGGAAATGTCCCTGTCCTTATCATCAATaGTGGGAAATGGCAACTTTTCTTTGGGTGTTGCACCATTGTAAG +
Preference number: 5 (lower is better)
Translates to: PTCRKGWKCPCPYHQ*WEMATFLWVLHHCK
Trigger: CTTACAATGGTGCAACACCCAAAGAAAAGTTGCCATTTCCCATCATTGATGATAAGGACAGGGACATTTCCATCCTTTTCTGCATGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS CCA 72 bp GGAAATCGTGGAAGCGGATACGGCCGATGGTGGTATTaGCCTCAAAGTCGGGGGCTTCTTCCCCGAGAAGCA +
Preference number: 6 (lower is better)
Translates to: GNRGSGYGRWWY*PQSRGLLPREA
Trigger: TGCTTCTCGGGGAAGAAGCCCCCGACTTTGAGGCCAATACCACCATCGGCCGTATCCGCTTCCACGATTTCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS TCA 72 bp GGTAAAGTCCTTTGGGTGGGAAAAGAGCATGCCCCATaGATTTCCCAGGAAATCGTGGAAGCGGATACGGCC +
Preference number: 6 (lower is better)
Translates to: GKVLWVGKEHAP*ISQEIVEADTA
Trigger: GGCCGTATCCGCTTCCACGATTTCCTGGGAAATTCATGGGGCATGCTCTTTTCCCACCCAAAGGACTTTACC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6
CDS TCA 72 bp AGAAAAGGATGGAAATGTCCCTGTCCTTATCATCAATaGTGGGAAATGGCAACTTTTCTTTGGGTGTTGCAC +
Preference number: 6 (lower is better)
Translates to: RKGWKCPCPYHQ*WEMATFLWVLH
Trigger: GTGCAACACCCAAAGAAAAGTTGCCATTTCCCATCATTGATGATAAGGACAGGGACATTTCCATCCTTTTCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000057072.6