Pregenerated sensors for PRDX6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026701Ensembl transcript IDs: ENSMUST00000051925.5, ENSMUST00000071718.12, ENSMUST00000192639.6
Found 64 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GGCAGACATCACCAGAGAGCAGATGTGGAAACTCTAGGAGGTACATaGGCACTCTTGGGAGGCGAAAGGCTTTCTGAGCCCACTTCGATA | + |
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Preference number: 1 (lower is better) Translates to: GRHHQRADVETLGGT*ALLGGERLSEPTSI Trigger: TATCGAAGTGGGCTCAGAAAGCCTTTCGCCTCCCAAGAGTGCGCATGTACCTCCTAGAGTTTCCACATCTGCTCTCTGGTGATGTCTGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR CCA 90 bp | AAATACAGAATCGAAAGCTTCTCCCTATGTCAGTGCTCTCCAAAATaGGTAACAGAAGATTCAGTTCGGAAAGATACAAAAGGTGTTTCA | + |
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Preference number: 1 (lower is better) Translates to: KYRIESFSLCQCSPK*VTEDSVRKDTKGVS Trigger: TGAAACACCTTTTGTATCTTTCCGAACTGAATCTTCTGTTACCCATTTTGGAGAGCACTGACATAGGGAGAAGCTTTCGATTCTGTATTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR CCA 90 bp | AAATGGCCACCCACTACTAGGACACTGAGTGGTAAAACACTGTCACCGCCCGTCCTCAGGCCCCAGTACTaGATGTGCAGATGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: KWPPTTRTLSGKTLSPPVLRPQY*MCRCSP Trigger: GGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAG...GACGGGCGGTGACAGTGTTTTACCACTCAGTGTCCTAGTAGTGGGTGGCCATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR CCA 90 bp | GTAGGGCACTGTGACAGGCAGAGGGGCAGAATGCTGGCGAAGGCACAGAGTAAAAGAGGGGCAGAATGCTaGCGAAGGCACAGAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: VGHCDRQRGRMLAKAQSKRGAEC*RRHRVK Trigger: CTTTACTCTGTGCCTTCGCCAGCATTCTGCCCCTCT...TTTACTCTGTGCCTTCGCCAGCATTCTGCCCCTCTGCCTGTCACAGTGCCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR TCA 90 bp | CGAAAGCTTCTCCCTATGTCAGTGCTCTCCAAAATGGGTAACAGAAGATTCAGTCCCACGGCTGCCAGCTaGCATCCTCAGGCCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: RKLLPMSVLSKMGNRRFSPTAAS*HPQAPV Trigger: TACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGG...ACTGAATCTTCTGTTACCCATTTTGGAGAGCACTGACATAGGGAGAAGCTTTCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR TCA 90 bp | CTTCAATACATAATTCGTTTCAAAGAGAGCCAGTCAGTAGGGCACTGTGACAGGCCCACGGCTGCCAGCTaGCATCCTCAGGCCCCAGTA | + |
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Preference number: 2 (lower is better) Translates to: LQYIIRFKESQSVGHCDRPTAAS*HPQAPV Trigger: TACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGG...CCTGTCACAGTGCCCTACTGACTGGCTCTCTTTGAAACGAATTATGTATTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR GCA 90 bp | CCGCCCGTCTTTTATAAGGTGCGTTCACAGGCAGACATCACCAGAGAGCAGATGCCCCAGTACTGGATGTaGAGATGCAGCCCCAATTTC | + |
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Preference number: 2 (lower is better) Translates to: PPVFYKVRSQADITREQMPQYWM*RCSPNF Trigger: GAAATTGGGGCTGCATCTGCACATCCAGTACTGGGG...CATCTGCTCTCTGGTGATGTCTGCCTGTGAACGCACCTTATAAAAGACGGGCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR CCA 90 bp | TTGGGAGGCGAAAGGCTTTCTGAGCCCACTTCGATAGAAACTTACAATAGATTCCTCAGGCCCCAGTACTaGATGTGCAGATGCAGCCCC | + |
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Preference number: 2 (lower is better) Translates to: LGGERLSEPTSIETYNRFLRPQY*MCRCSP Trigger: GGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAG...GAATCTATTGTAAGTTTCTATCGAAGTGGGCTCAGAAAGCCTTTCGCCTCCCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR TCA 90 bp | GCACTCTTGGGAGGCGAAAGGCTTTCTGAGCCCACTTCGATAGAAACTTACAATAGGCGAAAGGCTTTCTaGGCCCACTTCGATAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: ALLGGERLSEPTSIETYNRRKAF*AHFDRN Trigger: GTTTCTATCGAAGTGGGCTCAGAAAGCCTTTCGCCT...ATTGTAAGTTTCTATCGAAGTGGGCTCAGAAAGCCTTTCGCCTCCCAAGAGTGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR CCA 90 bp | CACACTGACACTACCTTGTTTGCTGATCAAAGACCCTACAGAGACCTAAGGAATCTTCTTCCAGTCAACTaGGGTGGCAACCGGCTTTGT | + |
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Preference number: 2 (lower is better) Translates to: HTDTTLFADQRPYRDLRNLLPVN*GGNRLC Trigger: ACAAAGCCGGTTGCCACCCCAGTTGACTGGAAGAAG...ATTCCTTAGGTCTCTGTAGGGTCTTTGATCAGCAAACAAGGTAGTGTCAGTGTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192639.6 |
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| 3UTR CAA 90 bp | AATTCATCCTTCAGTGGCTTCCAGTTCATGCGGAGACTCATGTTGTaGGAGAAACATACCCATGCTATTCCCAGCAAGAAGGAAGCATGC | + |
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Preference number: 2 (lower is better) Translates to: NSSFSGFQFMRRLML*EKHTHAIPSKKEAC Trigger: GCATGCTTCCTTCTTGCTGGGAATAGCATGGGTATGTTTCTCCAACAACATGAGTCTCCGCATGAACTGGAAGCCACTGAAGGATGAATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR-3UTR TCA 90 bp | ATGTCAGTGCTCTCCAAAATGGGTAACAGAAGATTCAGTTCGGAAAGATACAAAGTCAGTAGGGCACTGTaGCAGGCAGAGGGGCAGAAT | + |
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Preference number: 2 (lower is better) Translates to: MSVLSKMGNRRFSSERYKVSRAL*QAEGQN Trigger: ATTCTGCCCCTCTGCCTGTCACAGTGCCCTACTGAC...TTTGTATCTTTCCGAACTGAATCTTCTGTTACCCATTTTGGAGAGCACTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR GCA 90 bp | CTGGAAGCCAGACTTCCCATTAAAAGCAGGGACCAAAGTAATTACGTGTGTAATCCCCAGTACTGGATGTaGAGATGCAGCCCCAATTTC | + |
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Preference number: 2 (lower is better) Translates to: LEARLPIKSRDQSNYVCNPQYWM*RCSPNF Trigger: GAAATTGGGGCTGCATCTGCACATCCAGTACTGGGG...ATTACACACGTAATTACTTTGGTCCCTGCTTTTAATGGGAAGTCTGGCTTCCAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR-3UTR CCA 90 bp | ATTCAGTTCGGAAAGATACAAAAGGTGTTTCATCATTCTAGCACAGAGCCCACAAGAGGGGCAGAATGCTaGCGAAGGCACAGAGTAAAG | + |
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Preference number: 2 (lower is better) Translates to: IQFGKIQKVFHHSSTEPTRGAEC*RRHRVK Trigger: CTTTACTCTGTGCCTTCGCCAGCATTCTGCCCCTCT...TGTGGGCTCTGTGCTAGAATGATGAAACACCTTTTGTATCTTTCCGAACTGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR-3UTR TCA 90 bp | ATGTCAGTGCTCTCCAAAATGGGTAACAGAAGATTCAGTTCGGAAAGATACAAAGAGAGTCAACCACTCTaGGAATCTCATCAAAGTTCC | + |
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Preference number: 2 (lower is better) Translates to: MSVLSKMGNRRFSSERYKESQPL*ESHQSS Trigger: GGAACTTTGATGAGATTCTCAGAGTGGTTGACTCTC...TTTGTATCTTTCCGAACTGAATCTTCTGTTACCCATTTTGGAGAGCACTGACAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000192639.6 |
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| 3UTR-3UTR GCA 90 bp | AAGATTCAGTTCGGAAAGATACAAAAGGTGTTTCATCATTCTAGCACAGAGCCCCCGAGAAGGTTTTGGTaGCATTTCCATTTAATGACC | + |
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Preference number: 2 (lower is better) Translates to: KIQFGKIQKVFHHSSTEPPRRFW*HFHLMT Trigger: GGTCATTAAATGGAAATGGCACCAAAACCTTCTCGG...GGGCTCTGTGCTAGAATGATGAAACACCTTTTGTATCTTTCCGAACTGAATCTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR CAA 90 bp | TTCGCTATCGTTATGAACTGTAATGTAAATATTTTCCATTGGTCCTaGGTGACCAAAGAGGTTATGAGCCACAAGTTGAGAACCTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: FAIVMNCNVNIFHWS*VTKEVMSHKLRTSE Trigger: CTCAGAGGTTCTCAACTTGTGGCTCATAACCTCTTTGGTCACCAAGGACCAATGGAAAATATTTACATTACAGTTCATAACGATAGCGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR TCA 72 bp | TCTACGGACCTGCTGCAAGGACCCACGGCTGCCAGCTaGCATCCTCAGGCCCCAGTACTGGATGTGCAGATG | + |
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Preference number: 3 (lower is better) Translates to: STDLLQGPTAAS*HPQAPVLDVQM Trigger: CATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGCAGGTCCGTAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR GCA 72 bp | CGATCTTTCTACGGACCTGCTGCAAGGACCCACGGCTaGCAGCTGACATCCTCAGGCCCCAGTACTGGATGT | + |
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Preference number: 3 (lower is better) Translates to: RSFYGPAARTHG*QLTSSGPSTGC Trigger: ACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGCAGGTCCGTAGAAAGATCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR CCA 72 bp | CCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTaGATGTGCAGATGCAGCCCCAATTTCCGCAAAGAC | + |
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Preference number: 3 (lower is better) Translates to: PRLPADILRPQY*MCRCSPNFRKD Trigger: GTCTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR GCA 72 bp | GCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATaGAGCCCCAATTTCCGCAAAGACTTAAGGCTGGGG | + |
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Preference number: 3 (lower is better) Translates to: ADILRPQYWMCR*SPNFRKDLRLG Trigger: CCCCAGCCTTAAGTCTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192639.6 |
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| 3UTR GCA 72 bp | CACCAGAGAGCAGATGTGGAAACTCTAGGAGGTACATaGGCACTCTTGGGAGGCGAAAGGCTTTCTGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: HQRADVETLGGT*ALLGGERLSEP Trigger: GGGCTCAGAAAGCCTTTCGCCTCCCAAGAGTGCGCATGTACCTCCTAGAGTTTCCACATCTGCTCTCTGGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR GCA 72 bp | CTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATGTaGAGATGCAGCCCCAATTTCCGCAAAGACTTAAGG | + |
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Preference number: 3 (lower is better) Translates to: LPADILRPQYWM*RCSPNFRKDLR Trigger: CCTTAAGTCTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000192639.6 |
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| 3UTR TCA 72 bp | AATTCGTTTCAAAGAGAGCCAGTCAGTAGGGCACTGTaGCAGGCAGAGGGGCAGAATGCTGGCGAAGGCACA | + |
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Preference number: 3 (lower is better) Translates to: NSFQREPVSRAL*QAEGQNAGEGT Trigger: TGTGCCTTCGCCAGCATTCTGCCCCTCTGCCTGTCACAGTGCCCTACTGACTGGCTCTCTTTGAAACGAATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR GCA 72 bp | GTGGTAAAACACTGTCACCGCCCGTCTTTTATAAGGTaGGTTCACAGGCAGACATCACCAGAGAGCAGATGT | + |
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Preference number: 3 (lower is better) Translates to: VVKHCHRPSFIR*VHRQTSPESRC Trigger: ACATCTGCTCTCTGGTGATGTCTGCCTGTGAACGCACCTTATAAAAGACGGGCGGTGACAGTGTTTTACCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR CCA 72 bp | ATAGGGCATGATGGTAACATTTGTAATCTGAGCCCCTaGGGAGCTGTGGCAGCAGGAAAGATTTCAGGTCTA | + |
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Preference number: 3 (lower is better) Translates to: IGHDGNICNLSP*GAVAAGKISGL Trigger: TAGACCTGAAATCTTTCCTGCTGCCACAGCTCCCCAGGGGCTCAGATTACAAATGTTACCATCATGCCCTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR TCA 72 bp | GCAGAATTCAGAAATGGCCACCCACTACTAGGACACTaGGTGGTAAAACACTGTCACCGCCCGTCTTTTATA | + |
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Preference number: 3 (lower is better) Translates to: AEFRNGHPLLGH*VVKHCHRPSFI Trigger: TATAAAAGACGGGCGGTGACAGTGTTTTACCACTCAGTGTCCTAGTAGTGGGTGGCCATTTCTGAATTCTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| 3UTR TCA 72 bp | AGGACCCACCACTGCCTTGAATTTAACTCTCCAGCTTaGCACCTAGAAATAAACATCCCATGCTCAAGCCAG | + |
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Preference number: 3 (lower is better) Translates to: RTHHCLEFNSPA*HLEINIPCSSQ Trigger: CTGGCTTGAGCATGGGATGTTTATTTCTAGGTGTCAAGCTGGAGAGTTAAATTCAAGGCAGTGGTGGGTCCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR-3UTR CAA 90 bp | CAAAAACCAGAAACGCCTCAACAGGAACTGGAAGCCAGACTTCCCATTAAAAGCATGCGGAGACTCATGTaGTTGGAGAAACATACCCAT | + |
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Preference number: 3 (lower is better) Translates to: QKPETPQQELEARLPIKSMRRLM*LEKHTH Trigger: ATGGGTATGTTTCTCCAACAACATGAGTCTCCGCAT...GCTTTTAATGGGAAGTCTGGCTTCCAGTTCCTGTTGAGGCGTTTCTGGTTTTTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR-3UTR CAA 90 bp | CTTCAATACATAATTCGTTTCAAAGAGAGCCAGTCAGTAGGGCACTGTGACAGGTCCTTTAGGGAAACATaGTTTGGCTTCCTCTTCGGA | + |
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Preference number: 3 (lower is better) Translates to: LQYIIRFKESQSVGHCDRSFRET*FGFLFG Trigger: TCCGAAGAGGAAGCCAAACAATGTTTCCCTAAAGGA...CCTGTCACAGTGCCCTACTGACTGGCTCTCTTTGAAACGAATTATGTATTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000192639.6 |
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| 3UTR CCA 72 bp | GCTATCGTTATGAACTGTAATGTAAATATTTTCCATTaGTCCTTGGTGACCAAAGAGGTTATGAGCCACAAG | + |
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Preference number: 3 (lower is better) Translates to: AIVMNCNVNIFH*SLVTKEVMSHK Trigger: CTTGTGGCTCATAACCTCTTTGGTCACCAAGGACCAATGGAAAATATTTACATTACAGTTCATAACGATAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | GCTGCAAGGACCCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATGTTCTCCCAGGAAATCGTaGAAGCGGATGCGGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: AARTHGCQLTSSGPSTGCSPRKS*KRMRPM Trigger: CATCGGCCGCATCCGCTTCCACGATTTCCTGGGAGA...ACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | GCAAGGACCCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCATGTCAGGGCCAAAAATaGACACCACACGGGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: ARTHGCQLTSSGPSTGCACQGQK*TPHGPS Trigger: TGACGGCCCGTGTGGTGTTCATTTTTGGCCCTGACA...TGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | GGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCACTTCTTCCAGTCAACTaGGGTGGCAACCGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: GCQLTSSGPSTGCADAAPLLPVN*GGNRLC Trigger: ACAAAGCCGGTTGCCACCCCAGTTGACTGGAAGAAG...TGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR GCA 90 bp | GCTGCAAGGACCCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATGTCGACTGGATCCAACATaGCCAAAAGGATGGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: AARTHGCQLTSSGPSTGCRLDPT*PKGWQG Trigger: ACCTTGCCATCCTTTTGGGCATGTTGGATCCAGTCG...ACATCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | GGACCTGCTGCAAGGACCCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGAGAGTCAACCACTCTaGGAATCTCATCAAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: GPAARTHGCQLTSSGPSTESQPL*ESHQSS Trigger: GGAACTTTGATGAGATTCTCAGAGTGGTTGACTCTC...AGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGCAGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | CATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAAAGATCCAGTCAACTGGGGTaGCAACCGGCTTTGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: HPQAPVLDVQMQPQFPQRSSQLG*QPALCL Trigger: CAGGCACAAAGCCGGTTGCCACCCCAGTTGACTGGA...TCTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | AAATGGCCACCCACTACTAGGACACTGAGTGGTAAAACACTGTCACCGCCCGTCTCTCCCAGGAAATCGTaGAAGCGGATGCGGCCGATG | + |
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Preference number: 4 (lower is better) Translates to: KWPPTTRTLSGKTLSPPVSPRKS*KRMRPM Trigger: CATCGGCCGCATCCGCTTCCACGATTTCCTGGGAGA...GACGGGCGGTGACAGTGTTTTACCACTCAGTGTCCTAGTAGTGGGTGGCCATTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR CCA 90 bp | CAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCCTTCTTCCAGTCAACTaGGGTGGCAACCGGCTTTGT | + |
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Preference number: 4 (lower is better) Translates to: QLTSSGPSTGCADAAPISLLPVN*GGNRLC Trigger: ACAAAGCCGGTTGCCACCCCAGTTGACTGGAAGAAG...GGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR TCA 90 bp | CAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCAAAGAGAATGCCCCATaGATCTCCCAGGAAATCGTG | + |
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Preference number: 4 (lower is better) Translates to: QLTSSGPSTGCADAAPISKENAP*ISQEIV Trigger: CACGATTTCCTGGGAGATTCATGGGGCATTCTCTTT...GGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR TCA 90 bp | ACATCACCAGAGAGCAGATGTGGAAACTCTAGGAGGTACATGCGCACTCTTGGGTGTCAGGGCCAAAAATaGACACCACACGGGCCGTCA | + |
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Preference number: 4 (lower is better) Translates to: TSPESRCGNSRRYMRTLGCQGQK*TPHGPS Trigger: TGACGGCCCGTGTGGTGTTCATTTTTGGCCCTGACA...CCCAAGAGTGCGCATGTACCTCCTAGAGTTTCCACATCTGCTCTCTGGTGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR GCA 90 bp | ACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAAAGCGACTGGATCCAACATaGCCAAAAGGATGGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: TSSGPSTGCADAAPISAKRLDPT*PKGWQG Trigger: ACCTTGCCATCCTTTTGGGCATGTTGGATCCAGTCG...CTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR CCA 90 bp | ACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAAAGTTTGTGCCTGTCAGCTaGAGAGAGTCAACCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: TSSGPSTGCADAAPISAKFVPVS*RESTTL Trigger: CAGAGTGGTTGACTCTCTCCAGCTGACAGGCACAAA...CTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR GCA 90 bp | AAATGGCCACCCACTACTAGGACACTGAGTGGTAAAACACTGTCACCGCCCGTCCGACTGGATCCAACATaGCCAAAAGGATGGCAAGGT | + |
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Preference number: 4 (lower is better) Translates to: KWPPTTRTLSGKTLSPPVRLDPT*PKGWQG Trigger: ACCTTGCCATCCTTTTGGGCATGTTGGATCCAGTCG...GACGGGCGGTGACAGTGTTTTACCACTCAGTGTCCTAGTAGTGGGTGGCCATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | ACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAAAGGAGAGTCAACCACTCTaGGAATCTCATCAAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: TSSGPSTGCADAAPISAKESQPL*ESHQSS Trigger: GGAACTTTGATGAGATTCTCAGAGTGGTTGACTCTC...CTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | CTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAATGGCAACTTTTCCGTaGGTGTTTCACCATTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: LTSSGPSTGCADAAPISAMATFP*VFHHCK Trigger: CTTACAATGGTGAAACACCCACGGAAAAGTTGCCAT...TGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR CCA 90 bp | GTAGGGCACTGTGACAGGCAGAGGGGCAGAATGCTGGCGAAGGCACAGAGTAAAATGGCAACTTTTCCGTaGGTGTTTCACCATTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: VGHCDRQRGRMLAKAQSKMATFP*VFHHCK Trigger: CTTACAATGGTGAAACACCCACGGAAAAGTTGCCAT...TTTACTCTGTGCCTTCGCCAGCATTCTGCCCCTCTGCCTGTCACAGTGCCCTAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR CCA 90 bp | CAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCATCAATGATGGGAAATaGCAACTTTTCCGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: QLTSSGPSTGCADAAPISINDGK*QLFRGC Trigger: ACACCCACGGAAAAGTTGCCATTTCCCATCATTGAT...GGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | CAGCTGACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCTGCCCTTATCATCAATaGTGGGAAATGGCAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: QLTSSGPSTGCADAAPISCPYHQ*WEMATF Trigger: AAAAGTTGCCATTTCCCATCATTGATGATAAGGGCA...GGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGTCAGCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR GCA 90 bp | AACACACAAAAACCAGAAACGCCTCAACAGGAACTGGAAGCCAGACTTCCCATTAATCGTGGAAGCGGATaGGGCCGATGGTGGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: NTQKPETPQQELEARLPINRGSG*GRWWYW Trigger: CCAATACCACCATCGGCCGCATCCGCTTCCACGATT...AATGGGAAGTCTGGCTTCCAGTTCCTGTTGAGGCGTTTCTGGTTTTTGTGTGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | GGGCATGATGGTAACATTTGTAATCTGAGCCCCTGGGGAGCTGTGGCAGCAGGAATCAATGATGGGAAATaGCAACTTTTCCGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: GHDGNICNLSPWGAVAAGINDGK*QLFRGC Trigger: ACACCCACGGAAAAGTTGCCATTTCCCATCATTGAT...TCCTGCTGCCACAGCTCCCCAGGGGCTCAGATTACAAATGTTACCATCATGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | CCGCCCGTCTTTTATAAGGTGCGTTCACAGGCAGACATCACCAGAGAGCAGATGATGGCAACTTTTCCGTaGGTGTTTCACCATTGTAAG | + |
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Preference number: 4 (lower is better) Translates to: PPVFYKVRSQADITREQMMATFP*VFHHCK Trigger: CTTACAATGGTGAAACACCCACGGAAAAGTTGCCAT...CATCTGCTCTCTGGTGATGTCTGCCTGTGAACGCACCTTATAAAAGACGGGCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | ACATCCTCAGGCCCCAGTACTGGATGTGCAGATGCAGCCCCAATTTCCGCAAAGCTCAACACTGTCTATTaGAAGAGCAATCAACTTAAC | + |
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Preference number: 4 (lower is better) Translates to: TSSGPSTGCADAAPISAKLNTVY*KSNQLN Trigger: GTTAAGTTGATTGCTCTTTCAATAGACAGTGTTGAG...CTTTGCGGAAATTGGGGCTGCATCTGCACATCCAGTACTGGGGCCTGAGGATGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | ATTCAGTTCGGAAAGATACAAAAGGTGTTTCATCATTCTAGCACAGAGCCCACATCCAGTCAACTGGGGTaGCAACCGGCTTTGTGCCTG | + |
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Preference number: 4 (lower is better) Translates to: IQFGKIQKVFHHSSTEPTSSQLG*QPALCL Trigger: CAGGCACAAAGCCGGTTGCCACCCCAGTTGACTGGA...TGTGGGCTCTGTGCTAGAATGATGAAACACCTTTTGTATCTTTCCGAACTGAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR CCA 90 bp | CTTCAATACATAATTCGTTTCAAAGAGAGCCAGTCAGTAGGGCACTGTGACAGGTTTGTGCCTGTCAGCTaGAGAGAGTCAACCACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LQYIIRFKESQSVGHCDRFVPVS*RESTTL Trigger: CAGAGTGGTTGACTCTCTCCAGCTGACAGGCACAAA...CCTGTCACAGTGCCCTACTGACTGGCTCTCTTTGAAACGAATTATGTATTGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR CAA 72 bp | TTCAGTGGCTTCCAGTTCATGCGGAGACTCATGTTGTaGGAGAAACATACCCATGCTATTCCCAGCAAGAAG | + |
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Preference number: 4 (lower is better) Translates to: FSGFQFMRRLML*EKHTHAIPSKK Trigger: CTTCTTGCTGGGAATAGCATGGGTATGTTTCTCCAACAACATGAGTCTCCGCATGAACTGGAAGCCACTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR TCA 90 bp | CAAAAACCAGAAACGCCTCAACAGGAACTGGAAGCCAGACTTCCCATTAAAAGCTGCCCTTATCATCAATaGTGGGAAATGGCAACTTTT | + |
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Preference number: 4 (lower is better) Translates to: QKPETPQQELEARLPIKSCPYHQ*WEMATF Trigger: AAAAGTTGCCATTTCCCATCATTGATGATAAGGGCA...GCTTTTAATGGGAAGTCTGGCTTCCAGTTCCTGTTGAGGCGTTTCTGGTTTTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR GCA 90 bp | AAATGGGTAACAGAAGATTCAGTTCGGAAAGATACAAAAGGTGTTTCATCATTCAATCGTGGAAGCGGATaGGGCCGATGGTGGTATTGG | + |
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Preference number: 4 (lower is better) Translates to: KWVTEDSVRKDTKGVSSFNRGSG*GRWWYW Trigger: CCAATACCACCATCGGCCGCATCCGCTTCCACGATT...GAATGATGAAACACCTTTTGTATCTTTCCGAACTGAATCTTCTGTTACCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR CCA 90 bp | ATCGAAAGCTTCTCCCTATGTCAGTGCTCTCCAAAATGGGTAACAGAAGATTCAATCAATGATGGGAAATaGCAACTTTTCCGTGGGTGT | + |
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Preference number: 4 (lower is better) Translates to: IESFSLCQCSPKWVTEDSINDGK*QLFRGC Trigger: ACACCCACGGAAAAGTTGCCATTTCCCATCATTGAT...TGAATCTTCTGTTACCCATTTTGGAGAGCACTGACATAGGGAGAAGCTTTCGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000071718.12 ENSMUST00000192639.6 |
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| CDS-3UTR TCA 90 bp | CTTCAATACATAATTCGTTTCAAAGAGAGCCAGTCAGTAGGGCACTGTGACAGGCTCAACACTGTCTATTaGAAGAGCAATCAACTTAAC | + |
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Preference number: 4 (lower is better) Translates to: LQYIIRFKESQSVGHCDRLNTVY*KSNQLN Trigger: GTTAAGTTGATTGCTCTTTCAATAGACAGTGTTGAG...CCTGTCACAGTGCCCTACTGACTGGCTCTCTTTGAAACGAATTATGTATTGAAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| 3UTR CAA 72 bp | GTTATGAACTGTAATGTAAATATTTTCCATTGGTCCTaGGTGACCAAAGAGGTTATGAGCCACAAGTTGAGA | + |
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Preference number: 4 (lower is better) Translates to: VMNCNVNIFHWS*VTKEVMSHKLR Trigger: TCTCAACTTGTGGCTCATAACCTCTTTGGTCACCAAGGACCAATGGAAAATATTTACATTACAGTTCATAAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS-3UTR CAA 90 bp | CCTGCTGCAAGGACCCACGGCTGCCAGCTGACATCCTCAGGCCCCAGTACTGGATCCTTTAGGGAAACATaGTTTGGCTTCCTCTTCGGA | + |
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Preference number: 5 (lower is better) Translates to: PAARTHGCQLTSSGPSTGSFRET*FGFLFG Trigger: TCCGAAGAGGAAGCCAAACAATGTTTCCCTAAAGGA...TCCAGTACTGGGGCCTGAGGATGTCAGCTGGCAGCCGTGGGTCCTTGCAGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 |
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| CDS-3UTR CAA 90 bp | ATCGAAAGCTTCTCCCTATGTCAGTGCTCTCCAAAATGGGTAACAGAAGATTCATCCTTTAGGGAAACATaGTTTGGCTTCCTCTTCGGA | + |
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Preference number: 5 (lower is better) Translates to: IESFSLCQCSPKWVTEDSSFRET*FGFLFG Trigger: TCCGAAGAGGAAGCCAAACAATGTTTCCCTAAAGGA...TGAATCTTCTGTTACCCATTTTGGAGAGCACTGACATAGGGAGAAGCTTTCGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000071718.12 |
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| CDS TCA 72 bp | CCAAAAGGATGGCAAGGTCCCTGCCCTTATCATCAATaGTGGGAAATGGCAACTTTTCCGTGGGTGTTTCAC | + |
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Preference number: 6 (lower is better) Translates to: PKGWQGPCPYHQ*WEMATFPWVFH Trigger: GTGAAACACCCACGGAAAAGTTGCCATTTCCCATCATTGATGATAAGGGCAGGGACCTTGCCATCCTTTTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000051925.5 ENSMUST00000071718.12 ENSMUST00000192639.6 |
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