Pregenerated sensors for PRDX5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000024953Ensembl transcript IDs: ENSMUST00000025904.12, ENSMUST00000149261.8, ENSMUST00000173091.2, ENSMUST00000238095.2
Found 63 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TGGCTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTaGGAGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGA | + |
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Preference number: 1 (lower is better) Translates to: WLPVRRYRAFWPRAG*ERWESQRTSGQGLR Trigger: TCTGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAGCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| 3UTR CCA 90 bp | AAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCTTTTaGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAGGACATCT | + |
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Preference number: 1 (lower is better) Translates to: KVPFTWLPVRRYRAF*PRAGWERWESQRTS Trigger: AGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCATGGCCTAGAGCCGGGTaGGAGAGATGGGAGAGTCAG | + |
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Preference number: 2 (lower is better) Translates to: LEPGGRDGRVRGHLARASWPRAG*ERWESQ Trigger: CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCA...TGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGCTCTAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGCCGGGTGGGAGAGATaGGAGAGTCAGAGGACATCT | + |
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Preference number: 2 (lower is better) Translates to: LEPGGRDGRVRGHLARASAGWER*ESQRTS Trigger: AGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGC...TGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGCTCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGTCAGAGGACATCTGGCCAGGGCCTCAGAGTTGAGAGAGGATGTTGGGGGCGAGGCCTGTGCCATCTaGCTCCACGTTCAGTGCCTT | + |
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Preference number: 2 (lower is better) Translates to: RVRGHLARASELREDVGGEACAI*LHVQCL Trigger: AAGGCACTGAACGTGGAGCCAGATGGCACAGGCCTC...GCCCCCAACATCCTCTCTCAACTCTGAGGCCCTGGCCAGATGTCCTCTGACTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| 3UTR CCA 72 bp | TTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCTTTTaGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAG | + |
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Preference number: 3 (lower is better) Translates to: FTWLPVRRYRAF*PRAGWERWESQ Trigger: CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAGCCACGTAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| 3UTR-3UTR CAA 90 bp | CAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCGCCTTCACTATGCCGTaGTCTATCACCATGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: QKYGQGSIYVAPSKEVPSAFTMP*SITMEN Trigger: GTTCTCCATGGTGATAGACAACGGCATAGTGAAGGC...GCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGTCACCGCGGAGCTGCTaGAGCTGCGGGCTCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: PVRRYRAFWPRAGWERWESPRSC*SCGLRH Trigger: GTGGCGGAGCCCGCAGCTTCAGCAGCTCCGCGGTGA...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | GATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGAGTTGAGAGAGGATGTTTCACCGCGGAGCTGCTaGAGCTGCGGGCTCCGCCAC | + |
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Preference number: 4 (lower is better) Translates to: DGRVRGHLARASELREDVSPRSC*SCGLRH Trigger: GTGGCGGAGCCCGCAGCTTCAGCAGCTCCGCGGTGA...AACATCCTCTCTCAACTCTGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGCCAGGAGCCGAACCTTaGCTTCTGCCTGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PVRRYRAFWPRAGWERWEPGAEP*LLPGGL Trigger: GAGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGG...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGCCAGGAGCCGAACCTTaGCTTCTGCCTGGTGGGCTC | + |
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Preference number: 4 (lower is better) Translates to: LPVRRYRAFWPRAGWERWPGAEP*LLPGGL Trigger: GAGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGG...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CCA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGCCACCTGCGCTCCCTTaGCCTTCAGAGCTCCAGCTT | + |
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Preference number: 4 (lower is better) Translates to: PVRRYRAFWPRAGWERWEPPALP*PSELQL Trigger: AAGCTGGAGCTCTGAAGGCCAAGGGAGCGCAGGTGG...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | GGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAGCACAGAACTGGCTTTaGAGCCCAGGACTCGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: GGTEPFGLEPGGRDGRVRAQNWL*SPGLEA Trigger: GGCTTCGAGTCCTGGGCTGCAAAGCCAGTTCTGTGC...TCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTAGACAGGCCACCACCTaGGCTCCCTTGGCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: VRRYRAFWPRAGWERWESRQATT*APLAFR Trigger: TCTGAAGGCCAAGGGAGCGCAGGTGGTGGCCTGTCT...ACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CCA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGCACGGAGCACAGAACTaGCTTTGCAGCCCAGGACTC | + |
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Preference number: 4 (lower is better) Translates to: PVRRYRAFWPRAGWERWEHGAQN*LCSPGL Trigger: GAGTCCTGGGCTGCAAAGCCAGTTCTGTGCTCCGTG...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS-3UTR CCA 90 bp | GTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCCACCTGCGCTCCCTTaGCCTTCAGAGCTCCAGCTT | + |
|
Preference number: 4 (lower is better) Translates to: VRRYRAFWPRAGWERWESPPALP*PSELQL Trigger: AAGCTGGAGCTCTGAAGGCCAAGGGAGCGCAGGTGG...ACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CCA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGGCCTGTGCCATCTaGCTCCACGTTCAGTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LPVRRYRAFWPRAGWERWEACAI*LHVQCL Trigger: AAGGCACTGAACGTGGAGCCAGATGGCACAGGCCTC...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 |
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| CDS-3UTR GCA 90 bp | GGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGATTCAGAGCTCCAGCTTaGTCCACAAACCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GGTEPFGLEPGGRDGRVRFRAPA*STNPGR Trigger: CCTGCCTGGGTTTGTGGAGCAAGCTGGAGCTCTGAA...TCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGTTCAGAGCTCCAGCTTaGTCCACAAACCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: RRYRAFWPRAGWERWESQFRAPA*STNPGR Trigger: CCTGCCTGGGTTTGTGGAGCAAGCTGGAGCTCTGAA...CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | AGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGAGTTGAGAGAGGATCCAGGAGCCGAACCTTaGCTTCTGCCTGGTGGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RDGRVRGHLARASELREDPGAEP*LLPGGL Trigger: GAGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGG...ATCCTCTCTCAACTCTGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | GTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTACCCAGCAGAAAAAGTaGCTGGCGGTTCAGGGGTCC | + |
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Preference number: 4 (lower is better) Translates to: VRRYRAFWPRAGWERWESTQQKK*LAVQGS Trigger: GGACCCCTGAACCGCCAGGCACTTTTTCTGCTGGGT...ACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS-3UTR CCA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGCCTCCACTGAGGGAATaGCATCTCCCACCTGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: LPVRRYRAFWPRAGWERWPPLRE*HLPPGE Trigger: TTCTCCAGGTGGGAGATGCCATTCCCTCAGTGGAGG...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS-3UTR TCA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGCACACAGATAGACCTTaGTGGAGCCAGTGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: LPVRRYRAFWPRAGWERWHTDRP*WSQCSH Trigger: GTGTGAGCACTGGCTCCATCAAGGTCTATCTGTGTG...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS-3UTR CCA 90 bp | GGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAACAAACCCAGGCAGGTaGGTCTTAGAACAGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: GGTEPFGLEPGGRDGRVRTNPGR*VLEQPG Trigger: ACCTGGCTGTTCTAAGACCCACCTGCCTGGGTTTGT...TCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGTTCAAATACCTCCACTaGGGGAATGGCATCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: PVRRYRAFWPRAGWERWEFKYLH*GNGISH Trigger: GTGGGAGATGCCATTCCCTCAGTGGAGGTATTTGAA...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | GGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGATTCAAATACCTCCACTaGGGGAATGGCATCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: GGTEPFGLEPGGRDGRVRFKYLH*GNGISH Trigger: GTGGGAGATGCCATTCCCTCAGTGGAGGTATTTGAA...TCTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | AGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGACAGCCAGGTGTAAATaGCCCAGGGACTCCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: RRYRAFWPRAGWERWESQTARCK*PRDSKQ Trigger: TTGTTTGGAGTCCCTGGGGCATTTACACCTGGCTGT...CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGCAGGGTAAAACAGAGTaGAGAGAGACTAGTGAACCA | + |
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Preference number: 4 (lower is better) Translates to: LPVRRYRAFWPRAGWERWQGKTE*RETSEP Trigger: TGGTTCACTAGTCTCTCTTCACTCTGTTTTACCCTG...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS-3UTR GCA 90 bp | AGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCCTTTCCGGCCTGCTCTaGCTGCCAAGCACGTCGATG | + |
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Preference number: 4 (lower is better) Translates to: RNMVKVPFTWLPVRRYRALSGLL*LPSTSM Trigger: CATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAG...GGCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS-3UTR GCA 90 bp | AGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCAGACAGGCCACCACCTaGGCTCCCTTGGCCTTCAGA | + |
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Preference number: 4 (lower is better) Translates to: RNMVKVPFTWLPVRRYRARQATT*APLAFR Trigger: TCTGAAGGCCAAGGGAGCGCAGGTGGTGGCCTGTCT...GGCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | TGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCACACTCCCAACCTaGTTCTTTCCGGCCTGCTCT | + |
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Preference number: 4 (lower is better) Translates to: CRNMVKVPFTWLPVRRYRATLPT*FFPACS Trigger: AGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGC...TCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS-3UTR CCA 90 bp | TGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGAGGCCTGTGCCATCTaGCTCCACGTTCAGTGCCTT | + |
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Preference number: 4 (lower is better) Translates to: CRNMVKVPFTWLPVRRYREACAI*LHVQCL Trigger: AAGGCACTGAACGTGGAGCCAGATGGCACAGGCCTC...TCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS-3UTR GCA 90 bp | GGCTCCACGTTCAGTGCCTTCACTATGCCGTTGTCTATCACCATGGAGAACCTTACAGCCAGGTGTAAATaGCCCAGGGACTCCAAACAA | + |
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Preference number: 4 (lower is better) Translates to: GSTFSAFTMPLSITMENLTARCK*PRDSKQ Trigger: TTGTTTGGAGTCCCTGGGGCATTTACACCTGGCTGT...AAGGTTCTCCATGGTGATAGACAACGGCATAGTGAAGGCACTGAACGTGGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR GCA 90 bp | TTGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGTTCAGAGCTCCAGCTTaGTCCACAAACCCAGGCAGG | + |
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Preference number: 4 (lower is better) Translates to: LQKYGQGSIYVAPSKEVPFRAPA*STNPGR Trigger: CCTGCCTGGGTTTGTGGAGCAAGCTGGAGCTCTGAA...CGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR CCA 90 bp | TGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAACAAACCCAGGCAGGTaGGTCTTAGAACAGCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: CRNMVKVPFTWLPVRRYRTNPGR*VLEQPG Trigger: ACCTGGCTGTTCTAAGACCCACCTGCCTGGGTTTGT...TCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR TCA 90 bp | AAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCCTTTTCAAATACCTCCACTaGGGGAATGGCATCTCCCAC | + |
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Preference number: 4 (lower is better) Translates to: KYGQGSIYVAPSKEVPSLFKYLH*GNGISH Trigger: GTGGGAGATGCCATTCCCTCAGTGGAGGTATTTGAA...AAGGCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS GCA 90 bp | CACCGCGGAGCTGCTGAAGCTGCGGGCTCCGCCACACTCCCAACCTaGTTCTTTCCGGCCTGCTCTGCCTGCCAAGCACGTCGATGCACG | + |
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Preference number: 5 (lower is better) Translates to: HRGAAEAAGSATLPT*FFPACSACQARRCT Trigger: CGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGCGGAGCCCGCAGCTTCAGCAGCTCCGCGGTG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS GCA 90 bp | GAAGCTGCGGGCTCCGCCACACTCCCAACCTGCTTCTTTCCGGCCTaGTCTGCCTGCCAAGCACGTCGATGCACGGAGCACAGAACTGGC | + |
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Preference number: 5 (lower is better) Translates to: EAAGSATLPTCFFPA*SACQARRCTEHRTG Trigger: GCCAGTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGCGGAGCCCGCAGCTTC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS-3UTR CAA 90 bp | CTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGCCAGGAGCCGAACCTaGCCTTCTGCCTGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: LEPGGRDGRVRGHLARASARSRT*PSAWWA Trigger: AGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGGC...TGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCTCCCACCCGGCTCTAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS GCA 90 bp | TGCGGGCTCCGCCACACTCCCAACCTGCTTCTTTCCGGCCTGCTCTaGCTGCCAAGCACGTCGATGCACGGAGCACAGAACTGGCTTTGC | + |
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Preference number: 5 (lower is better) Translates to: CGLRHTPNLLLSGLL*LPSTSMHGAQNWLC Trigger: GCAAAGCCAGTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGCGGAGCCCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS GCA 90 bp | CCAACCTGCTTCTTTCCGGCCTGCTCTGCCTGCCAAGCACGTCGATaGACGGAGCACAGAACTGGCTTTGCAGCCCAGGACTCGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: PTCFFPACSACQARR*TEHRTGFAAQDSKP Trigger: GGGCTTCGAGTCCTGGGCTGCAAAGCCAGTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS-3UTR CAA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGACCACCTGCGCTCCCTaGGCCTTCAGAGCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LPVRRYRAFWPRAGWERWTTCAP*AFRAPA Trigger: AGCTGGAGCTCTGAAGGCCAAGGGAGCGCAGGTGGT...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | GTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTGCCAGGAGCCGAACCTaGCCTTCTGCCTGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: VRRYRAFWPRAGWERWESARSRT*PSAWWA Trigger: AGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGGC...ACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | GTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTATGGCATCTCCCACCTaGATCGGGGCCATGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: VRRYRAFWPRAGWERWESMASPT*IGAMVT Trigger: GGTGACCATGGCCCCGATCAAGGTGGGAGATGCCAT...ACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | AGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGCTTCAGAGCTCCAGCTaGCTCCACAAACCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: RRYRAFWPRAGWERWESQLQSSS*LHKPRQ Trigger: CTGCCTGGGTTTGTGGAGCAAGCTGGAGCTCTGAAG...CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | CCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGCTTCAGAGCTCCAGCTaGCTCCACAAACCCAGGCAG | + |
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Preference number: 5 (lower is better) Translates to: PVRRYRAFWPRAGWERWELQSSS*LHKPRQ Trigger: CTGCCTGGGTTTGTGGAGCAAGCTGGAGCTCTGAAG...CTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | TGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGAGTTGAGAGAGGATGTTGGATGGCATCTCCCACCTaGATCGGGGCCATGGTCACC | + |
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Preference number: 5 (lower is better) Translates to: WESQRTSGQGLRVERGCWMASPT*IGAMVT Trigger: GGTGACCATGGCCCCGATCAAGGTGGGAGATGCCAT...CCAACATCCTCTCTCAACTCTGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | AGAGATGGGAGAGTCAGAGGACATCTGGCCAGGGCCTCAGAGTTGAGAGAGGATACCACCTGCGCTCCCTaGGCCTTCAGAGCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: RDGRVRGHLARASELREDTTCAP*AFRAPA Trigger: AGCTGGAGCTCTGAAGGCCAAGGGAGCGCAGGTGGT...ATCCTCTCTCAACTCTGAGGCCCTGGCCAGATGTCCTCTGACTCTCCCATCTCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | CAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAGCGCCAGGAGCCGAACCTaGCCTTCTGCCTGGTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: QKYGQGSIYVAPSKEVPSARSRT*PSAWWA Trigger: AGCCCACCAGGCAGAAGGCAAGGTTCGGCTCCTGGC...GCTCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS-3UTR CAA 90 bp | AGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGAGAGTCAGGCCTTCACTATGCCGTaGTCTATCACCATGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: RRYRAFWPRAGWERWESQAFTMP*SITMEN Trigger: GTTCTCCATGGTGATAGACAACGGCATAGTGAAGGC...CTGACTCTCCCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 |
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| CDS-3UTR CAA 90 bp | CTCCCAGTAAGGAGGTACCGAGCCTTTTGGCCTAGAGCCGGGTGGGAGAGATGGGCCTTCACTATGCCGTaGTCTATCACCATGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: LPVRRYRAFWPRAGWERWAFTMP*SITMEN Trigger: GTTCTCCATGGTGATAGACAACGGCATAGTGAAGGC...CCATCTCTCCCACCCGGCTCTAGGCCAAAAGGCTCGGTACCTCCTTACTGGGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 |
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| CDS-3UTR CAA 90 bp | TTGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGACCACCTGCGCTCCCTaGGCCTTCAGAGCTCCAGCT | + |
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Preference number: 5 (lower is better) Translates to: LQKYGQGSIYVAPSKEVPTTCAP*AFRAPA Trigger: AGCTGGAGCTCTGAAGGCCAAGGGAGCGCAGGTGGT...CGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000238095.2 |
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| CDS TCA 90 bp | CAGAGTGAAGAGAGACTAGTGAACCACAGCCACACAGATAGACCTTaGTGGAGCCAGTGCTCACACCCAGCAGAAAAAGTGCCTGGCGGT | + |
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Preference number: 5 (lower is better) Translates to: QSEERLVNHSHTDRP*WSQCSHPAEKVPGG Trigger: ACCGCCAGGCACTTTTTCTGCTGGGTGTGAGCACTGGCTCCATCAAGGTCTATCTGTGTGGCTGTGGTTCACTAGTCTCTCTTCACTCTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS-3UTR CAA 90 bp | TGCAGAAATATGGTCAAGGTTCCATTTACGTGGCTCCCAGTAAGGAGGTACCGAAGCACAGAACTGGCTTaGCAGCCCAGGACTCGAAGC | + |
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Preference number: 5 (lower is better) Translates to: CRNMVKVPFTWLPVRRYRSTELA*QPRTRS Trigger: GCTTCGAGTCCTGGGCTGCAAAGCCAGTTCTGTGCT...TCGGTACCTCCTTACTGGGAGCCACGTAAATGGAACCTTGACCATATTTCTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000025904.12 |
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| CDS CCA 90 bp | CTGGCTCCACGTTCAGTGCCTTCACTATGCCGTTGTCTATCACCATaGAGAACCTTTTCAGCCGACGATTCCCAAAGAGAGACACCAAAG | + |
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Preference number: 5 (lower is better) Translates to: LAPRSVPSLCRCLSP*RTFSADDSQRETPK Trigger: CTTTGGTGTCTCTCTTTGGGAATCGTCGGCTGAAAAGGTTCTCCATGGTGATAGACAACGGCATAGTGAAGGCACTGAACGTGGAGCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000173091.2 |
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| CDS GCA 72 bp | GCTGCTGAAGCTGCGGGCTCCGCCACACTCCCAACCTaGTTCTTTCCGGCCTGCTCTGCCTGCCAAGCACGT | + |
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Preference number: 6 (lower is better) Translates to: AAEAAGSATLPT*FFPACSACQAR Trigger: ACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGCGGAGCCCGCAGCTTCAGCAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS GCA 72 bp | CGCCACACTCCCAACCTGCTTCTTTCCGGCCTGCTCTaGCTGCCAAGCACGTCGATGCACGGAGCACAGAAC | + |
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Preference number: 6 (lower is better) Translates to: RHTPNLLLSGLL*LPSTSMHGAQN Trigger: GTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGTGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS GCA 72 bp | TTCTTTCCGGCCTGCTCTGCCTGCCAAGCACGTCGATaGACGGAGCACAGAACTGGCTTTGCAGCCCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: FFPACSACQARR*TEHRTGFAAQD Trigger: GTCCTGGGCTGCAAAGCCAGTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS GCA 72 bp | ACACTCCCAACCTGCTTCTTTCCGGCCTGCTCTGCCTaGCAAGCACGTCGATGCACGGAGCACAGAACTGGC | + |
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Preference number: 6 (lower is better) Translates to: TLPTCFFPACSA*QARRCTEHRTG Trigger: GCCAGTTCTGTGCTCCGTGCATCGACGTGCTTGGCAGGCAGAGCAGGCCGGAAAGAAGCAGGTTGGGAGTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 |
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| CDS CCA 72 bp | ATGGAGCCAGTGCTCACACCCAGCAGAAAAAGTGCCTaGCGGTTCAGGGGTCCATTTCTGTCCTCGCTCTCC | + |
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Preference number: 6 (lower is better) Translates to: MEPVLTPSRKSA*RFRGPFLSSLS Trigger: GGAGAGCGAGGACAGAAATGGACCCCTGAACCGCCAGGCACTTTTTCTGCTGGGTGTGAGCACTGGCTCCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000149261.8 |
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| CDS CAA 72 bp | TCAAATACCTCCACTGAGGGAATGGCATCTCCCACCTaGATCGGGGCCATGGTCACCGCGGAGCTGCTGAAG | + |
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Preference number: 6 (lower is better) Translates to: SNTSTEGMASPT*IGAMVTAELLK Trigger: CTTCAGCAGCTCCGCGGTGACCATGGCCCCGATCAAGGTGGGAGATGCCATTCCCTCAGTGGAGGTATTTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000173091.2 ENSMUST00000238095.2 |
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| CDS GCA 72 bp | CCCAGGCAGGTGGGTCTTAGAACAGCCAGGTGTAAATaGCCCAGGGACTCCAAACAAAACACCTTTCTTGCC | + |
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Preference number: 6 (lower is better) Translates to: PRQVGLRTARCK*PRDSKQNTFLA Trigger: GGCAAGAAAGGTGTTTTGTTTGGAGTCCCTGGGGCATTTACACCTGGCTGTTCTAAGACCCACCTGCCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000238095.2 |
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| CDS CAA 72 bp | CCATCTGGCTCCACGTTCAGTGCCTTCACTATGCCGTaGTCTATCACCATGGAGAACCTTTTCAGCCGACGA | + |
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Preference number: 6 (lower is better) Translates to: PSGSTFSAFTMP*SITMENLFSRR Trigger: TCGTCGGCTGAAAAGGTTCTCCATGGTGATAGACAACGGCATAGTGAAGGCACTGAACGTGGAGCCAGATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000025904.12 ENSMUST00000149261.8 ENSMUST00000173091.2 |
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