Pregenerated sensors for PRDM9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000051977Ensembl transcript IDs: ENSMUST00000167994.10, ENSMUST00000233295.2
Found 112 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTaGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGAAA | + |
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Preference number: 1 (lower is better) Translates to: VLGRQKLATLILRPT*STETVLGQPDCTEK Trigger: TTTCTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCGCCTGGTCTATAGCGTaGGTTCCAGGACAGCCAGGG | + |
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Preference number: 2 (lower is better) Translates to: PQRPQLFPTEISTKLILFAWSIA*VPGQPG Trigger: CCCTGGCTGTCCTGGAACTCACGCTATAGACCAGGC...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTGAGATGTGGTTTTATTaGTGTTGGCTTTCTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: LVLGRQKLATLILRPTWSEMWFY*CWLSHS Trigger: AGAATGAGAAAGCCAACAGCAATAAAACCACATCTC...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAATTTTGAGGCCAACCTaGTCTACAGAAACAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQILRPT*STETVL Trigger: TAGAACTGTTTCTGTAGACCAGGTTGGCCTCAAAAT...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTGTAATTGTTGAGATGTaGTTTTATTGCTGTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLVIVEM*FYCCWL Trigger: AAGCCAACAGCAATAAAACCACATCTCAACAATTAC...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAATTTTGAGGCCAACCTaGTCTACAGAAACAGTTCTA | + |
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Preference number: 2 (lower is better) Translates to: TLCSTFPQRPQLFPTEISILRPT*STETVL Trigger: TAGAACTGTTTCTGTAGACCAGGTTGGCCTCAAAAT...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCGTAAGTAAGCACTTATaGCTGACAAGGCAGCTAACA | + |
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Preference number: 2 (lower is better) Translates to: PQRPQLFPTEISTKLILFVSKHL*LTRQLT Trigger: TGTTAGCTGCCTTGTCAGCCATAAGTGCTTACTTAC...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGTCTTCCTGTAATTGTTaGGATGTGGTTTTATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQSSCNC*DVVLLL Trigger: CAGCAATAAAACCACATCTCAACAATTACAGGAAGA...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCTCTTCCTGTAATTGTTaGGATGTGGTTTTATTGCTG | + |
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Preference number: 2 (lower is better) Translates to: PQRPQLFPTEISTKLILFSSCNC*DVVLLL Trigger: CAGCAATAAAACCACATCTCAACAATTACAGGAAGA...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR GCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAAAGAAAATGAGAATTTaGAATGGGGCTTTACTCCTA | + |
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Preference number: 2 (lower is better) Translates to: TLCSTFPQRPQLFPTEISKKMRI*NGALLL Trigger: TAGGAGTAAAGCCCCATTGCAAATTCTCATTTTCTT...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGTAATTGTTGAGATGTaGTTTTATTGCTGTTGGCTT | + |
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Preference number: 2 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQVIVEM*FYCCWL Trigger: AAGCCAACAGCAATAAAACCACATCTCAACAATTAC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAAATGAGAATTTGCAATaGGGCTTTACTCCTAGTATT | + |
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Preference number: 2 (lower is better) Translates to: TLCSTFPQRPQLFPTEISNENLQ*GFTPSI Trigger: AATACTAGGAGTAAAGCCCCATTGCAAATTCTCATT...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCAGAGATGTGGTTTTATTaGTGTTGGCTTTCTCATTCT | + |
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Preference number: 2 (lower is better) Translates to: NLSHLKMRICSQVPLIPAEMWFY*CWLSHS Trigger: AGAATGAGAAAGCCAACAGCAATAAAACCACATCTC...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCAAAGAAAATGAGAATTTaGAATGGGGCTTTACTCCTA | + |
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Preference number: 2 (lower is better) Translates to: NLSHLKMRICSQVPLIPAKKMRI*NGALLL Trigger: TAGGAGTAAAGCCCCATTGCAAATTCTCATTTTCTT...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CAA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTGTGGTTTTATTGCTGTaGGCTTTCTCATTCTTTTCG | + |
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Preference number: 3 (lower is better) Translates to: LVLGRQKLATLILRPTWSVVLLL*AFSFFS Trigger: CGAAAAGAATGAGAAAGCCAACAGCAATAAAACCAC...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAGTGGTTTTATTGCTGTaGGCTTTCTCATTCTTTTCG | + |
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Preference number: 3 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQVVLLL*AFSFFS Trigger: CGAAAAGAATGAGAAAGCCAACAGCAATAAAACCAC...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAAAAGAAAATGAGAATTaGCAATGGGGCTTTACTCCT | + |
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Preference number: 3 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQKENEN*QWGFTP Trigger: AGGAGTAAAGCCCCATTGCAAATTCTCATTTTCTTT...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGAAAGAAAATGAGAATTaGCAATGGGGCTTTACTCCT | + |
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Preference number: 3 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQKENEN*QWGFTP Trigger: AGGAGTAAAGCCCCATTGCAAATTCTCATTTTCTTT...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR-3UTR CAA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGGAGGGGTTGTTCGTTaGTTTTTCTTTCTAACTTAT | + |
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Preference number: 3 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQGGVVR*FFFLTY Trigger: ATAAGTTAGAAAGAAAAACAAACGAACAACCCCTCC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| 3UTR GCA 72 bp | ACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTaGACAGAGAAATCTGTCTTTAAAAACCGAAAAAGA | + |
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Preference number: 3 (lower is better) Translates to: TWSTETVLGQPD*TEKSVFKNRKR Trigger: TCTTTTTCGGTTTTTAAAGACAGATTTCTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGCTGGATGAGGACTaGCTTCGCTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQVLDED*LRCKAP Trigger: CGGGGCTTTACAGCGAAGTCAGTCCTCATCCAGCAC...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGCTCATCCAGTTGGCTTaGGACTCGTCCTGTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQLIQLA*DSSCPS Trigger: GGATGGACAGGACGAGTCCCAAGCCAACTGGATGAG...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGCTTGATGAGGACTaGCTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQVLDED*LLCKAP Trigger: CGGGGCTTTACACAGAAGTCAGTCCTCATCAAGCAC...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TTGAGGCCAACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGGTGCTGGATGAGGACTaGCTTCGCTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LRPTWSTETVLGQPDCTEVLDED*LRCKAP Trigger: CGGGGCTTTACAGCGAAGTCAGTCCTCATCCAGCAC...CTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTCCTCTTCATCCTCTGTaGTCTGACCCTCATAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSPLHPL*SDPHRG Trigger: GCCCCTATGAGGGTCAGATCACAGAGGATGAAGAGG...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGTTGTCTGGCCTGTTCTaGGCTCTTCCACAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQLSGLF*ALPQFS Trigger: AGAGAACTGTGGAAGAGCTCAGAACAGGCCAGACAA...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGCTTGTATGTGTCCTCTaGTGCTGGATGAGGTCTGAC | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQLVCVL*CWMRSD Trigger: GTCAGACCTCATCCAGCACCAGAGGACACATACAAG...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTGTGCTTGATGAGGTCTaGCTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSVLDEV*LLCKAP Trigger: CGGGGCTTTACACAGAAGTCAGACCTCATCAAGCAC...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR GCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTAACCACTGTTGGCTaGCTCTTCATCCTCTGTGAT | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQVTTVG*LFILCD Trigger: ATCACAGAGGATGAAGAGGCAGCCAACAGTGGTTAC...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTCCTCTTCATCCTCTGTaGTCTGACCCTCATAGGGGC | + |
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Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLPLHPL*SDPHRG Trigger: GCCCCTATGAGGGTCAGATCACAGAGGATGAAGAGG...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGAGGAATTTCTGACTTaGGAAGGCCAAAGAGCACAA | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQEEFLT*EGQRAQ Trigger: TTGTGCTCTTTGGCCTTCTCAAGTCAGAAATTCCTC...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAGTGCTGGATGAGGTCTaGCTTCTGTGTAAAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQVLDEV*LLCKAP Trigger: TGGGGCTTTACACAGAAGTCAGACCTCATCCAGCAC...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTCATACCTCATCCAGTTaGCTTGGGACTCGTCCTGTC | + |
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Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLHTSSS*LGTRPV Trigger: GACAGGACGAGTCCCAAGCCAACTGGATGAGGTATG...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAATTGTCTGGCCTGTTCTaGGCTCTTCCACAGTTCTCT | + |
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Preference number: 4 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQLSGLF*ALPQFS Trigger: AGAGAACTGTGGAAGAGCTCAGAACAGGCCAGACAA...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGTGCTGGATGAGGTGTaGGTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQVLDEV*VLCKAP Trigger: CGGGGCTTTACACAGAACTCACACCTCATCCAGCAC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTGTGCTTGATGAGGTTTaGCTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLVLDEV*LLCKAP Trigger: CGGGGCTTTACACAGAAGTCAAACCTCATCAAGCAC...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR GCA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGGTGTGTGTCTTCTGGTaGTCATTGACATTTGACTTA | + |
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Preference number: 4 (lower is better) Translates to: MRICSQVPLIPALGRQRQVCVFW*SLTFDL Trigger: TAAGTCAAATGTCAATGAGCACCAGAAGACACACAC...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCACTCATCCAGTTGGCTTaGGACTCGTCCTGTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISLIQLA*DSSCPS Trigger: GGATGGACAGGACGAGTCCCAAGCCAACTGGATGAG...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTCCTGAAGCTGATCTaGACAGGGATCTCCTGGTTT | + |
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Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLFLKLI*TGISWF Trigger: AAACCAGGAGATCCCTGTTCAGATCAGCTTCAGGAA...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTATCTCATTTGTTCTTTaGGTGTGCTGGGAAAGGTTG | + |
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Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSISFVL*VCWERL Trigger: CAACCTTTCCCAGCACACTCAAAGAACAAATGAGAT...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCGTGCTGGATGAGGTGTaGGTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: PQRPQLFPTEISTKLILFVLDEV*VLCKAP Trigger: CGGGGCTTTACACAGAACTCACACCTCATCCAGCAC...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGTGCTTGATGAGGACTaGCTTCTGTGTAAAGCCCCG | + |
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Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQVLDED*LLCKAP Trigger: CGGGGCTTTACACAGAAGTCAGTCCTCATCAAGCAC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR TCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCGTGCTGGATGAGGTCTaGCTTCTGTGTAAAGCCCCA | + |
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Preference number: 4 (lower is better) Translates to: PQRPQLFPTEISTKLILFVLDEV*LLCKAP Trigger: TGGGGCTTTACACAGAAGTCAGACCTCATCCAGCAC...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CCA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCCATACCTCATCCAGTTaGCTTGGGACTCGTCCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PQRPQLFPTEISTKLILFHTSSS*LGTRPV Trigger: GACAGGACGAGTCCCAAGCCAACTGGATGAGGTATG...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTCTTGCAGATGTTCCTaGGAAGATTTCAGTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLSCRCS*EDFSAM Trigger: CATCGCACTGAAATCTTCCCAGGAACATCTGCAAGA...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGGCCAACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGGGCTCTGAGACCTATTaGAATCAGCATTTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LRPTWSTETVLGQPDCTEGSETY*NQHFIV Trigger: AACTATAAAATGCTGATTTCAATAGGTCTCAGAGCC...CTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TTGAGGCCAACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGCACAAAAGACAAGGATaGATTTCTGTCCTTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LRPTWSTETVLGQPDCTEHKRQG*ISVLSS Trigger: AGAACTAAGGACAGAAATTCATCCTTGTCTTTTGTG...CTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTATCTCATTTGTTCTTTaGGTGTGCTGGGAAAGGTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLISFVL*VCWERL Trigger: CAACCTTTCCCAGCACACTCAAAGAACAAATGAGAT...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTCATTTGACTTATCACTaGAATATTGCCCACATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSHLTYH*NIAHIV Trigger: GACAATGTGGGCAATATTTCAGTGATAAGTCAAATG...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAGTAACCACTGTTGGCTaGCTCTTCATCCTCTGTGAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISVTTVG*LFILCD Trigger: ATCACAGAGGATGAAGAGGCAGCCAACAGTGGTTAC...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTTATTTGGGGTTTCATTaGTTGCCTTTGGTAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSYLGFH*LPLVTH Trigger: ATGTGTTACCAAAGGCAAGCAATGAAACCCCAAATA...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTTCACTGTCATTTATTTaGGGTTTCATTGCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LVLGRQKLATLILRPTWSSLSFI*GFIACL Trigger: AAGGCAAGCAATGAAACCCCAAATAAATGACAGTGA...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGTTCTCTTCCTGCTGTaGATCCTTTCTTCATCTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQVLFLL*ILSSSC Trigger: GCAAGATGAAGAAAGGATTCACAGCAGGAAGAGAAC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCAGTGCTTGATGAGGTTTaGCTTCTGTGTAAAGCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPAVLDEV*LLCKAP Trigger: CGGGGCTTTACACAGAAGTCAAACCTCATCAAGCAC...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTGGGAAGATTTCAGTaGGATGATTCCATTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQLGRFQ*DDSIPY Trigger: ATATGGAATGGAATCATCGCACTGAAATCTTCCCAG...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTGTTGTTGAAATCCTCTaGCTGGGTTTGGATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLVVEIL*LGLDFL Trigger: AAGAAAATCCAAACCCAGGCAGAGGATTTCAACAAC...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCATCTTGCAGATGTTCCTaGGAAGATTTCAGTGCGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISSCRCS*EDFSAM Trigger: CATCGCACTGAAATCTTCCCAGGAACATCTGCAAGA...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | TTGAGGCCAACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGTTGAAATCCTCTGCCTaGGTTTGGATTTTCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: LRPTWSTETVLGQPDCTELKSSA*VWIFFL Trigger: TAAAAAGAAAATCCAAACCCAGGCAGAGGATTTCAA...CTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTTGTATGTGTCCTCTaGTGCTGGATGAGGTCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPALVCVL*CWMRSD Trigger: GTCAGACCTCATCCAGCACCAGAGGACACATACAAG...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCATTCCTGAAGCTGATCTaGACAGGGATCTCCTGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPAFLKLI*TGISWF Trigger: AAACCAGGAGATCCCTGTTCAGATCAGCTTCAGGAA...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCACTGGGAAGATTTCAGTaGGATGATTCCATTCCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISLGRFQ*DDSIPY Trigger: ATATGGAATGGAATCATCGCACTGAAATCTTCCCAG...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAGTTGTTGAAATCCTCTaGCTGGGTTTGGATTTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISVVEIL*LGLDFL Trigger: AAGAAAATCCAAACCCAGGCAGAGGATTTCAACAAC...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAGTGTGTGTCTTCTGGTaGTCATTGACATTTGACTTA | + |
|
Preference number: 4 (lower is better) Translates to: TLCSTFPQRPQLFPTEISVCVFW*SLTFDL Trigger: TAAGTCAAATGTCAATGAGCACCAGAAGACACACAC...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGGCTCTGAGACCTATTaGAATCAGCATTTTATAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQGSETY*NQHFIV Trigger: AACTATAAAATGCTGATTTCAATAGGTCTCAGAGCC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGTCATTTTTGTTCTGTaGATCAACATGTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQVIFVL*INMLFL Trigger: CAGGAACAACATGTTGATTCACAGAACAAAAATGAC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGCATTTGACTTATCACTaGAATATTGCCCACATTGTC | + |
|
Preference number: 4 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQHLTYH*NIAHIV Trigger: GACAATGTGGGCAATATTTCAGTGATAAGTCAAATG...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTAGATGATTCCTTCTaGTGTTTACTGTGCTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPALDDSF*CLLCFT Trigger: GGTGAAGCACAGTAAACAGCAGAAGGAATCATCTAG...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | GACTCCTTAGAAGTTTTAGCAGAACAGATGTTTAGTGACTACATTTGTCTTCCTTTTCTTCCAGCTTGTTaGTGTTCATGGTGCAGGACA | + |
|
Preference number: 4 (lower is better) Translates to: DSLEVLAEQMFSDYICLPFLPAC*CSWCRT Trigger: TGTCCTGCACCATGAACACCAACAAGCTGGAAGAAA...AGGAAGACAAATGTAGTCACTAAACATCTGTTCTGCTAAAACTTCTAAGGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000233295.2 |
||
| CDS-3UTR GCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCATATTTGGGGTTTCATTaGTTGCCTTTGGTAACACAT | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPAYLGFH*LPLVTH Trigger: ATGTGTTACCAAAGGCAAGCAATGAAACCCCAAATA...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR TCA 90 bp | GACTCCTTAGAAGTTTTAGCAGAACAGATGTTTAGTGACTACATTTGTCTTCCTGTCATTTTTGTTCTGTaGATCAACATGTTGTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLEVLAEQMFSDYICLPVIFVL*INMLFL Trigger: CAGGAACAACATGTTGATTCACAGAACAAAAATGAC...AGGAAGACAAATGTAGTCACTAAACATCTGTTCTGCTAAAACTTCTAAGGAGTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CCA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCATTGAAATCCTCTGCCTaGGTTTGGATTTTCTTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: NLSHLKMRICSQVPLIPALKSSA*VWIFFL Trigger: TAAAAAGAAAATCCAAACCCAGGCAGAGGATTTCAA...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGCTGAGGACTGAGTGGTaGGGATGCCCCCTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: MRICSQVPLIPALGRQRQLRTEW*GCPLST Trigger: GGTGGACAGGGGGCATCCCAACCACTCAGTCCTCAG...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTCCTCATCCAGTTGGCTaGGGACTCGTCCTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: LVLGRQKLATLILRPTWSPHPVG*GLVLSI Trigger: GATGGACAGGACGAGTCCCAAGCCAACTGGATGAGG...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGTGCTGGGAAAGGTTGTaGAAATCCTCTGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: MRICSQVPLIPALGRQRQCWERL*KSSAWV Trigger: AACCCAGGCAGAGGATTTCAACAACCTTTCCCAGCA...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTGTGTGCTGGGAAAGGTaGTTGAAATCCTCTGCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LVLGRQKLATLILRPTWSVCWER*LKSSAW Trigger: CCAGGCAGAGGATTTCAACAACCTTTCCCAGCACAC...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | CTAGTATTGGGGAGGCAGAAGCTAGCAACTCTGATTTTGAGGCCAACCTGGTCTTGCTGGGAAAGGTTGTaGAAATCCTCTGCCTGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LVLGRQKLATLILRPTWSCWERL*KSSAWV Trigger: AACCCAGGCAGAGGATTTCAACAACCTTTCCCAGCA...AGACCAGGTTGGCCTCAAAATCAGAGTTGCTAGCTTCTGCCTCCCCAATACTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTGAGGACTGAGTGGTaGGGATGCCCCCTGTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: NLSHLKMRICSQVPLIPALRTEW*GCPLST Trigger: GGTGGACAGGGGGCATCCCAACCACTCAGTCCTCAG...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCACCTCATCCAGTTGGCTaGGGACTCGTCCTGTCCATC | + |
|
Preference number: 5 (lower is better) Translates to: TLCSTFPQRPQLFPTEISPHPVG*GLVLSI Trigger: GATGGACAGGACGAGTCCCAAGCCAACTGGATGAGG...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | ATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCACTCGGGAGGCAGAGGCAGTTATTTGGGGTTTCATaGCTTGCCTTTGGTAACACA | + |
|
Preference number: 5 (lower is better) Translates to: MRICSQVPLIPALGRQRQLFGVS*LAFGNT Trigger: TGTGTTACCAAAGGCAAGCAATGAAACCCCAAATAA...CTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCACCTGGCTACAAATTCTCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | TTGAGGCCAACCTGGTCTACAGAAACAGTTCTAGGACAACCAGACTGCACAGAGCTATTTTCTTCCAGCTaGTTGGTGTTCATGGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LRPTWSTETVLGQPDCTELFSSS*LVFMVQ Trigger: CTGCACCATGAACACCAACAAGCTGGAAGAAAATAG...CTCTGTGCAGTCTGGTTGTCCTAGAACTGTTTCTGTAGACCAGGTTGGCCTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000233295.2 |
||
| CDS GCA 90 bp | TTACTGTGCTTCACCCGGAAAGGCACCCAAGGAGGACTGACTTGTTaGTTAGGTGTCCACTCTTCATCAGAATCCTCACTGTCATTTATT | + |
|
Preference number: 5 (lower is better) Translates to: LLCFTRKGTQGGLTC*LGVHSSSESSLSFI Trigger: AATAAATGACAGTGAGGATTCTGATGAAGAGTGGACACCTAAGCAACAAGTCAGTCCTCCTTGGGTGCCTTTCCGGGTGAAGCACAGTAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS TCA 90 bp | AGACCCTTCCTTCACATTAGATTCACCACTAAATGGCATTCTAGATaGTTCCTTCTGCTGTTTACTGTGCTTCACCCGGAAAGGCACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RPFLHIRFTTKWHSR*FLLLFTVLHPERHP Trigger: TGGGTGCCTTTCCGGGTGAAGCACAGTAAACAGCAGAAGGAATCATCTAGAATGCCATTTAGTGGTGAATCTAATGTGAAGGAAGGGTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCAACATACCTCATCCAGTaGGCTTGGGACTCGTCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NLSHLKMRICSQVPLIPATYLIQ*AWDSSC Trigger: ACAGGACGAGTCCCAAGCCAACTGGATGAGGTATGT...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAGATTTTCCTGTGATATaGAAAGGCTACCAGGTTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQDFPVI*KGYQVL Trigger: CAGAACCTGGTAGCCTTTCAATATCACAGGAAAATC...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAATCTTTGAATTCATCTTaGACCTTGGGTTTCCACTCG | + |
|
Preference number: 5 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQSLNSS*TLGFHS Trigger: CGAGTGGAAACCCAAGGTCAAAGATGAATTCAAAGA...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
||
| CDS-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAAGATCTCATTTGTTCTTaGAGTGTGCTGGGAAAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQDLICS*SVLGKV Trigger: AACCTTTCCCAGCACACTCAAAGAACAAATGAGATC...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTATTTGGGGTTTCATaGCTTGCCTTTGGTAACACA | + |
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Preference number: 5 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLLFGVS*LAFGNT Trigger: TGTGTTACCAAAGGCAAGCAATGAAACCCCAAATAA...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | AAGTTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTGGCCTTGTCATTTTaGTTCTGTGAATCAACATGT | + |
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Preference number: 5 (lower is better) Translates to: KFSRRNRTLCSTFPQRPQLALSF*FCESTC Trigger: ACATGTTGATTCACAGAACAAAAATGACAAGGCCAG...TTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAACTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | GACTCCTTAGAAGTTTTAGCAGAACAGATGTTTAGTGACTACATTTGTCTTCCTGTGTGCTGGGAAAGGTaGTTGAAATCCTCTGCCTGG | + |
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Preference number: 5 (lower is better) Translates to: DSLEVLAEQMFSDYICLPVCWER*LKSSAW Trigger: CCAGGCAGAGGATTTCAACAACCTTTCCCAGCACAC...AGGAAGACAAATGTAGTCACTAAACATCTGTTCTGCTAAAACTTCTAAGGAGTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS GCA 90 bp | CTCATTTGTTCTTTGAGTGTGCTGGGAAAGGTTGTTGAAATCCTCTaGCTGGGTTTGGATTTTCTTTTTACTTCATTGCTGGCCTTGTCA | + |
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Preference number: 5 (lower is better) Translates to: LICSLSVLGKVVEIL*LGLDFLFTSLLALS Trigger: TGACAAGGCCAGCAATGAAGTAAAAAGAAAATCCAAACCCAGGCAGAGGATTTCAACAACCTTTCCCAGCACACTCAAAGAACAAATGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAGATTTTCCTGTGATATaGAAAGGCTACCAGGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: TLCSTFPQRPQLFPTEISDFPVI*KGYQVL Trigger: CAGAACCTGGTAGCCTTTCAATATCACAGGAAAATC...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | TTCAGCAGGAGGAACAGAACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTATTCCATTCCATATGTaGAGTGAGGAATTTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: FSRRNRTLCSTFPQRPQLIPFHM*SEEFLT Trigger: AGTCAGAAATTCCTCACTCAACATATGGAATGGAAT...AAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGTTCTGTTCCTCCTGCTGAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGGATCTCATTTGTTCTTaGAGTGTGCTGGGAAAGGTT | + |
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Preference number: 5 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQDLICS*SVLGKV Trigger: AACCTTTCCCAGCACACTCAAAGAACAAATGAGATC...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS CCA 90 bp | TCTGATGCAATAAATGATTTGACTGTGTCCTCTGTATTTGTTGTCTaGCCTGTTCTGAGCTCTTCCACAGTTCTCTTACTTTCCTCAGAT | + |
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Preference number: 5 (lower is better) Translates to: SDAINDLTVSSVFVV*PVLSSSTVLLLSSD Trigger: ATCTGAGGAAAGTAAGAGAACTGTGGAAGAGCTCAGAACAGGCCAGACAACAAATACAGAGGACACAGTCAAATCATTTATTGCATCAGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCAAATCCTTTCTTCATCTaGCTTCCCCACTTAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: NLSHLKMRICSQVPLIPANPFFI*LPHLMP Trigger: GGGCATTAAGTGGGGAAGCAAGATGAAGAAAGGATT...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGAATTCATCTTTGACCTaGGGTTTCCACTCGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQNSSLT*GFHSNF Trigger: GAAATTCGAGTGGAAACCCAAGGTCAAAGATGAATT...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCACTGGCCTTGTCATTTTaGTTCTGTGAATCAACATGT | + |
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Preference number: 5 (lower is better) Translates to: TLCSTFPQRPQLFPTEISLALSF*FCESTC Trigger: ACATGTTGATTCACAGAACAAAAATGACAAGGCCAG...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | TCAAGCTGTCACATTTTTATTATTCCCAGGCAGGTTTTATGCCCACAGAAGCAGACTTCATTGCTGGCCTaGTCATTTTTGTTCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: SSCHIFIIPRQVLCPQKQTSLLA*SFLFCE Trigger: TTCACAGAACAAAAATGACAAGGCCAGCAATGAAGT...CTGCTTCTGTGGGCATAAAACCTGCCTGGGAATAATAAAAATGTGACAGCTTGA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | GACTCCTTAGAAGTTTTAGCAGAACAGATGTTTAGTGACTACATTTGTCTTCCTAATCCTTTCTTCATCTaGCTTCCCCACTTAATGCCC | + |
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Preference number: 5 (lower is better) Translates to: DSLEVLAEQMFSDYICLPNPFFI*LPHLMP Trigger: GGGCATTAAGTGGGGAAGCAAGATGAAGAAAGGATT...AGGAAGACAAATGTAGTCACTAAACATCTGTTCTGCTAAAACTTCTAAGGAGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | AACTTATCTCACTTGAAAATGAGAATTTGTAGCCAGGTGCCTTTAATCCCAGCATCTTTGAATTCATCTTaGACCTTGGGTTTCCACTCG | + |
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Preference number: 5 (lower is better) Translates to: NLSHLKMRICSQVPLIPASLNSS*TLGFHS Trigger: CGAGTGGAAACCCAAGGTCAAAGATGAATTCAAAGA...TGCTGGGATTAAAGGCACCTGGCTACAAATTCTCATTTTCAAGTGAGATAAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | ACTCTATGTAGTACTTTCCCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAATTCCATTCCATATGTaGAGTGAGGAATTTCTGACT | + |
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Preference number: 5 (lower is better) Translates to: TLCSTFPQRPQLFPTEISIPFHM*SEEFLT Trigger: AGTCAGAAATTCCTCACTCAACATATGGAATGGAAT...TGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGGGAAAGTACTACATAGAGT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | CCACAGAGGCCTCAACTTTTTCCCACAGAAATCTCAACTAAGCTAATACTTTTCACTTCATTGCTGGCCTaGTCATTTTTGTTCTGTGAA | + |
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Preference number: 5 (lower is better) Translates to: PQRPQLFPTEISTKLILFTSLLA*SFLFCE Trigger: TTCACAGAACAAAAATGACAAGGCCAGCAATGAAGT...GAAAAGTATTAGCTTAGTTGAGATTTCTGTGGGAAAAAGTTGAGGCCTCTGTGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS-3UTR CAA 90 bp | GACTCCTTAGAAGTTTTAGCAGAACAGATGTTTAGTGACTACATTTGTCTTCCTAATTCATCTTTGACCTaGGGTTTCCACTCGAATTTC | + |
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Preference number: 5 (lower is better) Translates to: DSLEVLAEQMFSDYICLPNSSLT*GFHSNF Trigger: GAAATTCGAGTGGAAACCCAAGGTCAAAGATGAATT...AGGAAGACAAATGTAGTCACTAAACATCTGTTCTGCTAAAACTTCTAAGGAGTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS GCA 72 bp | TTCACCCGGAAAGGCACCCAAGGAGGACTGACTTGTTaGTTAGGTGTCCACTCTTCATCAGAATCCTCACTG | + |
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Preference number: 6 (lower is better) Translates to: FTRKGTQGGLTC*LGVHSSSESSL Trigger: CAGTGAGGATTCTGATGAAGAGTGGACACCTAAGCAACAAGTCAGTCCTCCTTGGGTGCCTTTCCGGGTGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS CAA 72 bp | CTTCACCCGGAAAGGCACCCAAGGAGGACTGACTTGTaGCTTAGGTGTCCACTCTTCATCAGAATCCTCACT | + |
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Preference number: 6 (lower is better) Translates to: LHPERHPRRTDL*LRCPLFIRILT Trigger: AGTGAGGATTCTGATGAAGAGTGGACACCTAAGCAACAAGTCAGTCCTCCTTGGGTGCCTTTCCGGGTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS GCA 72 bp | AATGGCATTCTAGATGATTCCTTCTGCTGTTTACTGTaGTTCACCCGGAAAGGCACCCAAGGAGGACTGACT | + |
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Preference number: 6 (lower is better) Translates to: NGILDDSFCCLL*FTRKGTQGGLT Trigger: AGTCAGTCCTCCTTGGGTGCCTTTCCGGGTGAAGCACAGTAAACAGCAGAAGGAATCATCTAGAATGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS CAA 90 bp | TTTACTGTGCTTCACCCGGAAAGGCACCCAAGGAGGACTGACTTGTaGCTTAGGTGTCCACTCTTCATCAGAATCCTCACTGTCATTTAT | + |
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Preference number: 6 (lower is better) Translates to: FTVLHPERHPRRTDL*LRCPLFIRILTVIY Trigger: ATAAATGACAGTGAGGATTCTGATGAAGAGTGGACACCTAAGCAACAAGTCAGTCCTCCTTGGGTGCCTTTCCGGGTGAAGCACAGTAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS GCA 72 bp | GATTCACCACTAAATGGCATTCTAGATGATTCCTTCTaGTGTTTACTGTGCTTCACCCGGAAAGGCACCCAA | + |
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Preference number: 6 (lower is better) Translates to: DSPLNGILDDSF*CLLCFTRKGTQ Trigger: TTGGGTGCCTTTCCGGGTGAAGCACAGTAAACAGCAGAAGGAATCATCTAGAATGCCATTTAGTGGTGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS CAA 72 bp | GTGCTGGGAAAGGTTGTTGAAATCCTCTGCCTGGGTTaGGATTTTCTTTTTACTTCATTGCTGGCCTTGTCA | + |
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Preference number: 6 (lower is better) Translates to: VLGKVVEILCLG*DFLFTSLLALS Trigger: TGACAAGGCCAGCAATGAAGTAAAAAGAAAATCCAAACCCAGGCAGAGGATTTCAACAACCTTTCCCAGCAC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS TCA 72 bp | CTTCACATTAGATTCACCACTAAATGGCATTCTAGATaGTTCCTTCTGCTGTTTACTGTGCTTCACCCGGAA | + |
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Preference number: 6 (lower is better) Translates to: LHIRFTTKWHSR*FLLLFTVLHPE Trigger: TTCCGGGTGAAGCACAGTAAACAGCAGAAGGAATCATCTAGAATGCCATTTAGTGGTGAATCTAATGTGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS TCA 72 bp | TCTCATTTGTTCTTTGAGTGTGCTGGGAAAGGTTGTTaGAATCCTCTGCCTGGGTTTGGATTTTCTTTTTAC | + |
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Preference number: 6 (lower is better) Translates to: SHLFFECAGKGC*NPLPGFGFSFY Trigger: GTAAAAAGAAAATCCAAACCCAGGCAGAGGATTTCAACAACCTTTCCCAGCACACTCAAAGAACAAATGAGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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| CDS CCA 72 bp | ATAAATGATTTGACTGTGTCCTCTGTATTTGTTGTCTaGCCTGTTCTGAGCTCTTCCACAGTTCTCTTACTT | + |
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Preference number: 6 (lower is better) Translates to: INDLTVSSVFVV*PVLSSSTVLLL Trigger: AAGTAAGAGAACTGTGGAAGAGCTCAGAACAGGCCAGACAACAAATACAGAGGACACAGTCAAATCATTTAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000167994.10 ENSMUST00000233295.2 |
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