RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000057637

Ensembl transcript IDs: ENSMUST00000105778.8, ENSMUST00000134791.2, ENSMUST00000154280.8

Found 369 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp CTCAGGCATCCTCCGCCCCAAAGGCACAAAACCCAAGGACCTCAGTaGGCAAGGTCCGTGTTTCTGCCGGGCTCCAACTGTCCACCACAG +
Preference number: 1 (lower is better)
Translates to: LRHPPPQRHKTQGPQ*ARSVFLPGSNCPPQ
Trigger: CTGTGGTGGACAGTTGGAGCCCGGCAGAAACACGGACCTTGCTCACTGAGGTCCTTGGGTTTTGTGCCTTTGGGGCGGAGGATGCCTGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 90 bp CTCTCTCATGCTCACTCTCTCACTCTCACAACTGGGAGAGGTCAGTaGTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATT +
Preference number: 1 (lower is better)
Translates to: LSHAHSLTLTTGRGQ*SLQGRLLVPLASLI
Trigger: AATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTGACCTCTCCCAGTTGTGAGAGTGAGAGAGTGAGCATGAGAGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 90 bp TCTCTCTCTGATCCTCTCTCATGCTCACTCTCTCACTCTCACAACTaGGAGAGGTCAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTT +
Preference number: 1 (lower is better)
Translates to: SLSDPLSCSLSHSHN*ERSVLSAGQTAGPF
Trigger: AAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTGACCTCTCCCAGTTGTGAGAGTGAGAGAGTGAGCATGAGAGAGGATCAGAGAGAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 90 bp CCCCTCTCTTGTGTGACAACTCTCCCAAGTTCTGTCCTCCCACTTTaGCAGGTAGGGACCAGATCGGAGCTGAGGAAACATTACCAAAAT +
Preference number: 1 (lower is better)
Translates to: PLSCVTTLPSSVLPL*QVGTRSELRKHYQN
Trigger: ATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTCCCTACCTGTCAAAGTGGGAGGACAGAACTTGGGAGAGTTGTCACACAAGAGAGGGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 90 bp CTAGTGCTAGGGCCAAGGCTCAGGCTCAGCCCTGATGGATCTATATaGTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAAGGTCG +
Preference number: 1 (lower is better)
Translates to: LVLGPRLRLSPDGSI*YLLLIPRDSVRKRS
Trigger: CGACCTTTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGGGCTGAGCCTGAGCCTTGGCCCTAGCACTAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 90 bp TCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCGTCTaGCAAAACTTTCTCTTTGTTTTCCTGACAATCTGGGAAGTGTTG +
Preference number: 1 (lower is better)
Translates to: SASLGRPPLTRKHLV*QNFLFVFLTIWEVL
Trigger: CAACACTTCCCAGATTGTCAGGAAAACAAAGAGAAAGTTTTGTCAGACGAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTAACGGCCGCGGAGGCTaGATCCTGAGCGCGTGGGCT +
Preference number: 2 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVNGRGG*ILSAWA
Trigger: AGCCCACGCGCTCAGGATGCAGCCTCCGCGGCCGTT...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGTCAGAGGTCAGCCCTaGCCTCCCCTGGCAAGCGGT +
Preference number: 2 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVVRGQP*PPLASG
Trigger: ACCGCTTGCCAGGGGAGGGCAGGGCTGACCTCTGAC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR TCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCTTCCCAGAGACAGTGTaGGGAAAAGGTCGGTGGGGG +
Preference number: 2 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLFPETV*GKGRWG
Trigger: CCCCCACCGACCTTTTCCTCACACTGTCTCTGGGAA...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTAGAGGTCAGTGCTCTCTaGAGGGCAGACTGCTGGTCC +
Preference number: 2 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLEVSAL*RADCWS
Trigger: GGACCAGCAGTCTGCCCTGCAGAGAGCACTGACCTC...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGCTCTGCAGGGCAGACTaGTGGTCCCTTTGGCTTCAC +
Preference number: 2 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQLCRAD*WSLWLH
Trigger: GTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAG...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCACTGGGAGAGGTCAGTaGTCTCTGCAGGGCAGACTG +
Preference number: 2 (lower is better)
Translates to: DQIGAEETLPKSSQASSATGRGQ*SLQGRL
Trigger: CAGTCTGCCCTGCAGAGAGCACTGACCTCTCCCAGT...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR TCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGCCTCAAAGGAGGAAATaGCTTGAAAGCTGGCAGCTC +
Preference number: 2 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQPQRRK*LESWQL
Trigger: GAGCTGCCAGCTTTCAAGTCATTTCCTCCTTTGAGG...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGGCTGGCAGCTCCAGTTaGTTAGGGAGAAAAGGGGGT +
Preference number: 2 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREAGSSS*LGRKGG
Trigger: ACCCCCTTTTCTCCCTAAGCAACTGGAGCTGCCAGC...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGAAGGCTTTGGGTTCGTaGGGTTTTTCCCGGCTGCAG +
Preference number: 2 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREKALGS*GFSRLQ
Trigger: CTGCAGCCGGGAAAAACCGCACGAACCCAAAGCCTT...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 90 bp CTAGGGCCAAGGCTCAGGCTCAGCCCTGATGGATCTATATGCTATTaGCTATTGATTCCCAGAGACAGTGTGAGGAAAAGGTCGGTGGGG +
Preference number: 2 (lower is better)
Translates to: LGPRLRLSPDGSICY*LLIPRDSVRKRSVG
Trigger: CCCCACCGACCTTTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGGGCTGAGCCTGAGCCTTGGCCCTAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTACATACATGCACACATaGGCTCTCCTCTCTCTCTCT +
Preference number: 2 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVTYMHT*ALLSLS
Trigger: AGAGAGAGAGAGGAGAGCGCATGTGTGCATGTATGT...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR GCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCACTTTGCAGCTAACTTaGAAGGGTCAGATGCTAATG +
Preference number: 2 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLTLQLT*KGQMLM
Trigger: CATTAGCATCTGACCCTTGCAAGTTAGCTGCAAAGT...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 90 bp GCCCCTCTCTTGTGTGACAACTCTCCCAAGTTCTGTCCTCCCACTTaGACAGGTAGGGACCAGATCGGAGCTGAGGAAACATTACCAAAA +
Preference number: 2 (lower is better)
Translates to: APLLCDNSPKFCPPT*TGRDQIGAEETLPK
Trigger: TTTTGGTAATGTTTCCTCAGCTCCGATCTGGTCCCTACCTGTCAAAGTGGGAGGACAGAACTTGGGAGAGTTGTCACACAAGAGAGGGGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 90 bp GTTGCAATATCAACCATAGTAGCCCTGAAAAAGACAGCCCCTCTCTaGTGTGACAACTCTCCCAAGTTCTGTCCTCCCACTTTGACAGGT +
Preference number: 2 (lower is better)
Translates to: VAISTIVALKKTAPL*CDNSPKFCPPTLTG
Trigger: ACCTGTCAAAGTGGGAGGACAGAACTTGGGAGAGTTGTCACACAAGAGAGGGGCTGTCTTTTTCAGGGCTACTATGGTTGATATTGCAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 90 bp AGAGAGAGAGAGAATCCCCCACGAGCCCAGCAACATTTTCCAAGTTaGACTGAAAGCAGTTTGCTAAGGCTTTGGGTTCGTGCGGTTTTT +
Preference number: 2 (lower is better)
Translates to: RERENPPRAQQHFPS*TESSLLRLWVRAVF
Trigger: AAAAACCGCACGAACCCAAAGCCTTAGCAAACTGCTTTCAGTCAAACTTGGAAAATGTTGCTGGGCTCGTGGGGGATTCTCTCTCTCTCT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp TCTGAGAACGGCCGCGGAGGCTGCATCCTGAGCGCGTaGGCTCCGGGGTTCCCAGTGGAGACTTCAGAGCAG +
Preference number: 3 (lower is better)
Translates to: SENGRGGCILSA*APGFPVETSEQ
Trigger: CTGCTCTGAAGTCTCCACTGGGAACCCCGGAGCCCACGCGCTCAGGATGCAGCCTCCGCGGCCGTTCTCAGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp TGCATAGAAGGAGACGCCCCTCCCGGGCAGGATGGCTaGACCACAGAGCACGGTTCTGGGCCATGTCCAAGG +
Preference number: 3 (lower is better)
Translates to: CIEGDAPPGQDG*TTEHGSGPCPR
Trigger: CCTTGGACATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTCCTTCTATGCA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp GGTTTTTCCCGGCTGCAGGGCGTGGCTGGGATACAGTaGACGCGACCAGCTGTAGGACAGACTGTGTCAGTG +
Preference number: 3 (lower is better)
Translates to: GFSRLQGVAGIQ*TRPAVGQTVSV
Trigger: CACTGACACAGTCTGTCCTACAGCTGGTCGCGTGCACTGTATCCCAGCCACGCCCTGCAGCCGGGAAAAACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp AAATTGCATAGAAGGAGACGCCCCTCCCGGGCAGGATaGCTGCACCACAGAGCACGGTTCTGGGCCATGTCC +
Preference number: 3 (lower is better)
Translates to: KLHRRRRPSRAG*LHHRARFWAMS
Trigger: GGACATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTCCTTCTATGCAATTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TCCACCCCAGCGTCCCTAGACACTGCTTCTACTAAATaGGAGACCAGGTCTGAGAACGGCCGCGGAGGCTGC +
Preference number: 3 (lower is better)
Translates to: STPASLDTASTK*ETRSENGRGGC
Trigger: GCAGCCTCCGCGGCCGTTCTCAGACCTGGTCTCTCATTTAGTAGAAGCAGTGTCTAGGGACGCTGGGGTGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp CCTCCGCCCCAAAGGCACAAAACCCAAGGACCTCAGTaGGCAAGGTCCGTGTTTCTGCCGGGCTCCAACTGT +
Preference number: 3 (lower is better)
Translates to: PPPQRHKTQGPQ*ARSVFLPGSNC
Trigger: ACAGTTGGAGCCCGGCAGAAACACGGACCTTGCTCACTGAGGTCCTTGGGTTTTGTGCCTTTGGGGCGGAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp AGCTGGCAGCTCCAGTTGCTTAGGGAGAAAAGGGGGTaGGGTTTCCTAGTGCTAGGGCCAAGGCTCAGGCTC +
Preference number: 3 (lower is better)
Translates to: SWQLQLLREKRG*GFLVLGPRLRL
Trigger: GAGCCTGAGCCTTGGCCCTAGCACTAGGAAACCCCACCCCCTTTTCTCCCTAAGCAACTGGAGCTGCCAGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp GCTCACTCTCTCACTCTCACAACTGGGAGAGGTCAGTaGTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCT +
Preference number: 3 (lower is better)
Translates to: AHSLTLTTGRGQ*SLQGRLLVPLA
Trigger: AGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTGACCTCTCCCAGTTGTGAGAGTGAGAGAGTGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp AAACCCAAGGACCTCAGTGAGCAAGGTCCGTGTTTCTaGCGGGCTCCAACTGTCCACCACAGCAGAGGTCAG +
Preference number: 3 (lower is better)
Translates to: KPKDLSEQGPCF*RAPTVHHSRGQ
Trigger: CTGACCTCTGCTGTGGTGGACAGTTGGAGCCCGGCAGAAACACGGACCTTGCTCACTGAGGTCCTTGGGTTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp CCTGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTaGACCAGTCAGTCCCCTTACTGCAGCCAGTCAACT +
Preference number: 3 (lower is better)
Translates to: PAHVRVSRDPFS*TSQSPYCSQST
Trigger: AGTTGACTGGCTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp ACGGTTCTGGGCCATGTCCAAGGATCATCCAGAGGATaGCATGAAGGTCCTGCTCCTGAGGCTGGGACCACA +
Preference number: 3 (lower is better)
Translates to: TVLGHVQGSSRG*HEGPAPEAGTT
Trigger: TGTGGTCCCAGCCTCAGGAGCAGGACCTTCATGTCATCCTCTGGATGATCCTTGGACATGGCCCAGAACCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp ATGAAGGTCCTGCTCCTGAGGCTGGGACCACACACATaGACCAGCACACACATACATGCACACATGCGCTCT +
Preference number: 3 (lower is better)
Translates to: MKVLLLRLGPHT*TSTHIHAHMRS
Trigger: AGAGCGCATGTGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGGACCTTCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp GATCCTCTCTCATGCTCACTCTCTCACTCTCACAACTaGGAGAGGTCAGTGCTCTCTGCAGGGCAGACTGCT +
Preference number: 3 (lower is better)
Translates to: DPLSCSLSHSHN*ERSVLSAGQTA
Trigger: AGCAGTCTGCCCTGCAGAGAGCACTGACCTCTCCCAGTTGTGAGAGTGAGAGAGTGAGCATGAGAGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp TTTCCAAGTTTGACTGAAAGCAGTTTGCTAAGGCTTTaGGTTCGTGCGGTTTTTCCCGGCTGCAGGGCGTGG +
Preference number: 3 (lower is better)
Translates to: FPSLTESSLLRL*VRAVFPGCRAW
Trigger: CCACGCCCTGCAGCCGGGAAAAACCGCACGAACCCAAAGCCTTAGCAAACTGCTTTCAGTCAAACTTGGAAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TGTGTGACAACTCTCCCAAGTTCTGTCCTCCCACTTTaGCAGGTAGGGACCAGATCGGAGCTGAGGAAACAT +
Preference number: 3 (lower is better)
Translates to: CVTTLPSSVLPL*QVGTRSELRKH
Trigger: ATGTTTCCTCAGCTCCGATCTGGTCCCTACCTGTCAAAGTGGGAGGACAGAACTTGGGAGAGTTGTCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTaGTGGATGTTTTCCTGCCCATGTGAGGGTCTCCAG +
Preference number: 3 (lower is better)
Translates to: WVGKSENCDTGR*WMFSCPCEGLQ
Trigger: CTGGAGACCCTCACATGGGCAGGAAAACATCCATCAACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TCCCCCACGAGCCCAGCAACATTTTCCAAGTTTGACTaGAAGCAGTTTGCTAAGGCTTTGGGTTCGTGCGGT +
Preference number: 3 (lower is better)
Translates to: SPTSPATFSKFD*KQFAKALGSCG
Trigger: ACCGCACGAACCCAAAGCCTTAGCAAACTGCTTTCAGTCAAACTTGGAAAATGTTGCTGGGCTCGTGGGGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp GGGCCAAGGCTCAGGCTCAGCCCTGATGGATCTATATaGTATTTGCTATTGATTCCCAGAGACAGTGTGAGG +
Preference number: 3 (lower is better)
Translates to: GPRLRLSPDGSI*YLLLIPRDSVR
Trigger: CCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGGGCTGAGCCTGAGCCTTGGCCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR GCA 72 bp GGCGACAGCCATGAGTCCATGCTTTCGAGGACTAACTaGAGGGTGCGTAGAAGGAGAAAATTCCAGTTGAAG +
Preference number: 3 (lower is better)
Translates to: GDSHESMLSRTN*RVRRRRKFQLK
Trigger: CTTCAACTGGAATTTTCTCCTTCTACGCACCCTGCAGTTAGTCCTCGAAAGCATGGACTCATGGCTGTCGCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CCA 72 bp CTGTCTTCACATGGCAGAATACTGAATCTTCTTCACTaGGACGGAAATCCGCTAGCTTGGGAAGACCGCCAC +
Preference number: 3 (lower is better)
Translates to: LSSHGRILNLLH*DGNPLAWEDRH
Trigger: GTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAGTGAAGAAGATTCAGTATTCTGCCATGTGAAGACAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR CAA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCATTCCTTTGCTTCACTTaGCAGCTAACTTGCAAGGGT +
Preference number: 3 (lower is better)
Translates to: GAEETLPKSSQASSAPKAFLCFT*QLTCKG
Trigger: ACCCTTGCAAGTTAGCTGCAAAGTGAAGCAAAGGAA...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR-3UTR CAA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGCCTCCTGGTTTTTGTTaGTTTGAACCCATCCATATA +
Preference number: 3 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQPPGFC*FEPIHI
Trigger: TATATGGATGGGTTCAAACAAACAAAAACCAGGAGG...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp CATAGTAGCCCTGAAAAAGACAGCCCCTCTCTTGTGTaGCAACTCTCCCAAGTTCTGTCCTCCCACTTTGAC +
Preference number: 3 (lower is better)
Translates to: HSSPEKDSPSLV*QLSQVLSSHFD
Trigger: GTCAAAGTGGGAGGACAGAACTTGGGAGAGTTGTCACACAAGAGAGGGGCTGTCTTTTTCAGGGCTACTATG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TTTCCTAGTGCTAGGGCCAAGGCTCAGGCTCAGCCCTaGTGGATCTATATGCTATTTGCTATTGATTCCCAG +
Preference number: 3 (lower is better)
Translates to: FPSARAKAQAQP*WIYMLFAIDSQ
Trigger: CTGGGAATCAATAGCAAATAGCATATAGATCCATCAGGGCTGAGCCTGAGCCTTGGCCCTAGCACTAGGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR TCA 72 bp TTGGGAAGACCGCCACTGACCAGGAAACACCTCGTCTaGCAAAACTTTCTCTTTGTTTTCCTGACAATCTGG +
Preference number: 3 (lower is better)
Translates to: LGRPPLTRKHLV*QNFLFVFLTIW
Trigger: CCAGATTGTCAGGAAAACAAAGAGAAAGTTTTGTCAGACGAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATTGCTCTGCAGGTGGCTaGGGCTCTTCTAGGAGGCCT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHCSAGG*GSSRRP
Trigger: AGGCCTCCTAGAAGAGCCGCAGCCACCTGCAGAGCA...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCCTTCAGCTCATGCCTaGCACTGCTGTCCTCTCTCC +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHPSAHA*HCCPLS
Trigger: GGAGAGAGGACAGCAGTGCCAGGCATGAGCTGAAGG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATTGCTGTCCTCTCTCCTaGTTTCACTCAGGTCCGCAG +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHCCPLS*FHSGPQ
Trigger: CTGCGGACCTGAGTGAAAGCAGGAGAGAGGACAGCA...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCTGCTGAATGTCTCTTaGACAGCGCTCTGCCCACCT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHLLNVS*TALCPP
Trigger: AGGTGGGCAGAGCGCTGTCCAAGAGACATTCAGCAG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATATGGGACTGGAGTCTTaGCTGTGCCCTCTGACTTCT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHMGLES*LCPLTS
Trigger: AGAAGTCAGAGGGCACAGGCAAGACTCCAGTCCCAT...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATGGGTGGAGATCACGCTaGTGCTGCTGTAAATTGCAT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHGWRSR*CCCKLH
Trigger: ATGCAATTTACAGCAGCATCAGCGTGATCTCCACCC...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATGGATATTGTGGGTGGTaGAGTTTGTGGCTGTTACCC +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHGYCGW*SLWLLP
Trigger: GGGTAACAGCCACAAACTTCACCACCCACAATATCC...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGTCGGGGAGCTCCGCTTaGTCCGGGCGCTGGCTCGCT +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGRESGSSA*SGRWLA
Trigger: AGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGA...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGTCTTGGACAGCGCTCTaGCCACCTGCAGCTGGGGCC +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQSWTAL*PPAAGA
Trigger: GGCCCCAGCTGCAGGTGGGCAGAGCGCTGTCCAAGA...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTGCAGCAGCTGCCAGCTaGAGGCTTCGGGTGATTGGG +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGAAAAS*RLRVIG
Trigger: CCCAATCACCCGAAGCCTTCAGCTGGCAGCTGCTGC...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGCAGGTCCGCAGCAGCTaGCAGCTGAAGGCTTCGGGT +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQQVRSS*QLKASG
Trigger: ACCCGAAGCCTTCAGCTGGCAGCTGCTGCGGACCTG...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCATCCACCCCAAATTTaGGTAGTACACCTCCCACAT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHHPPQI*VVHLPH
Trigger: ATGTGGGAGGTGTACTACCCAAATTTGGGGTGGATG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTAGCTTGCTCCGGGCGCTaGCTCGCTCTTCCTCAATCG +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLACSGR*LALPQS
Trigger: CGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGC...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGGACAGGGAGGCTGCCTaGAGAGGGGGTGATGAAGGG +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLDREAA*RGGDEG
Trigger: CCCTTCATCACCCCCTCTCCAGGCAGCCTCCCTGTC...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCTGTCTCAGCGGCACTaGGTTTTTCTTAGGAGTGTA +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHLSQRH*VFLRSV
Trigger: TACACTCCTAAGAAAAACCCAGTGCCGCTGAGACAG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCTGTTCTTTTCTTGCTaGCCAGGGCAGTCTTGCTTT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHLFFSC*PGQSCF
Trigger: AAAGCAAGACTGCCCTGGCCAGCAAGAAAAGAACAG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATTGTTATCAACACTCTTaGCACACTTTGTGCAGCGGA +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHCYQHS*HTLCSG
Trigger: TCCGCTGCACAAAGTGTGGCAAGAGTGTTGATAACA...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTCTGGCAGAAGGGCTaGCTGCTCAGGTGCAGAAGC +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLLWQKG*LLRCRS
Trigger: GCTTCTGCACCTGAGCAGCCAGCCCTTCTGCCAGAG...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACAGGAGAGGGGCACTGTTaGGGAGAGGCATCACAAGAG +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTGEGHC*GEASQE
Trigger: CTCTTGTGATGCCTCTCCTCAACAGTGCCCCTCTCC...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTCTGGATCTGAAGGATaGGGAGGGCAGCGAGGCTTG +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGSGSEG*GGQRGL
Trigger: CAAGCCTCGCTGCCCTCCTCATCCTTCAGATCCAGA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCCATTCTGTCTGGATCTaGAGGATGAGGAGGGCAGCG +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLHSVWI*RMRRAA
Trigger: CGCTGCCCTCCTCATCCTTCAGATCCAGACAGAATG...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTAAGGGTCCCTGGAACTaGGTTGCTGCTGCAGCCTTG +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGKGPWN*VAAAAL
Trigger: CAAGGCTGCAGCAGCAACTCAGTTCCAGGGACCCTT...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCGGGGAGGTGGTGGAGTaGCAACAGTTAACACAGGAG +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLGEVVE*QQLTQE
Trigger: CTCCTGTGTTAACTGTTGCCACTCCACCACCTCCCC...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGGGCATATGCTCCACATaGGCCTTGCTGGGGTCTGTG +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQGICST*ALLGSV
Trigger: CACAGACCCCAGCAAGGCCCATGTGGAGCATATGCC...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCGTCTCATATTGGTGTaGGTTCCAAATACCTTTTTG +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHRLILV*VPNTFL
Trigger: CAAAAAGGTATTTGGAACTCACACCAATATGAGACG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGCTTGCCTGTGCCCTCTaGCTTCTGTTTGACACCGCT +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLLACAL*LLFDTA
Trigger: AGCGGTGTCAAACAGAAGTCAGAGGGCACAGGCAAG...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCACTCAGCAGTGGGGGCTaGGCAACTCGAGTCAGTAGC +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKALSSGG*ATRVSS
Trigger: GCTACTGACTCGAGTTGCTCAGCCCCCACTGCTGAG...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGAGCAGTGGCATTTaGGAATGGAGAGGGGCACTG +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLLSSGI*EWRGAL
Trigger: CAGTGCCCCTCTCCATTCTCAAATGCCACTGCTCAG...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGAGAGCCCCTCATGTTTaGAGAGGTGGAGTCCAGCTC +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQRAPHV*RGGVQL
Trigger: GAGCTGGACTCCACCTCTGCAAACATGAGGGGCTCT...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGGCAGAAGGGCTGGCTaGTCAGGTGCAGAAGCCAAA +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVGRRAG*SGAEAK
Trigger: TTTGGCTTCTGCACCTGAGCAGCCAGCCCTTCTGCC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACAGATATACACATCATCTaGGTCCCCGTCCTCCTCGGG +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTDIHII*VPVLLG
Trigger: CCCGAGGAGGACGGGGACGCAGATGATGTGTATATC...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGGCTCATGCCTGGCACTaGTGTCCTCTCTCCTGCTTT +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLAHAWH*CPLSCF
Trigger: AAAGCAGGAGAGAGGACAGCAGTGCCAGGCATGAGC...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATTTGCACTTGAAAGCGTaGTTGATTGTAGAAATGTGG +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHLHLKA*LIVEMW
Trigger: CCACATTTCTACAATCAACCACGCTTTCAAGTGCAA...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATAATCTCTACAGTTACTaGAGTGAGCAGACAGTCTAT +
Preference number: 4 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHNLYSY*SEQTVY
Trigger: ATAGACTGTCTGCTCACTCCAGTAACTGTAGAGATT...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTAAGATTCCCATGGGACTaGAGTCTTGCCTGTGCCCTC +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLRFPWD*SLACAL
Trigger: GAGGGCACAGGCAAGACTCCAGTCCCATGGGAATCT...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTAAGGACTTGGGCTCCTaGTCGCCTCTGGTGTGCTTT +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGKDLGS*SPLVCF
Trigger: AAAGCACACCAGAGGCGACCAGGAGCCCAAGTCCTT...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGTGGAGACTCAGCAGTaGGGGCTGAGCAACTCGAGT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVVETQQ*GLSNSS
Trigger: ACTCGAGTTGCTCAGCCCCCACTGCTGAGTCTCCAC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGGGGAAGAAGGCTCTGTaGGGATCAAGAGAGGAGGCA +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQGKKAL*GSREEA
Trigger: TGCCTCCTCTCTTGATCCCCACAGAGCCTTCTTCCC...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCTGCCCACCTGCAGCTaGGGCCTCTTCCTTGCGTTT +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSALPTCS*GLFLAF
Trigger: AAACGCAAGGAAGAGGCCCCAGCTGCAGGTGGGCAG...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp GGTCAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTaGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGT +
Preference number: 4 (lower is better)
Translates to: GQCSLQGRLLVP*ASLIPGHFRCC
Trigger: ACAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTGACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACACTGGGGCCTCTTCCTTaGGTTTCAGACCTTCACTCT +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTLGPLP*VSDLHS
Trigger: AGAGTGAAGGTCTGAAACGCAAGGAAGAGGCCCCAG...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCGGGTCTGTGAAGTTCTaGGGCCTCAGGGTCCCACTT +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSAGSVKF*GLRVPL
Trigger: AAGTGGGACCCTGAGGCCCCAGAACTTCACAGACCC...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACATTCCGCAGGCTCTTCTaGCAAACTCGGCATATGCTC +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTFRRLF*QTRHML
Trigger: GAGCATATGCCGAGTTTGCCAGAAGAGCCTGCGGAA...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCATGCCGCCTCCTGTTaGTCTGTGTGCCAAATGGTT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVHAASC*SVCQMV
Trigger: AACCATTTGGCACACAGATCAACAGGAGGCGGCATG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACCACCTCTGTTGTTaGTATGCTCAGAGGCAGACT +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGHHLCC*YAQRQT
Trigger: AGTCTGCCTCTGAGCATATCAACAACAGAGGTGGTG...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTAAGGAATCTCAGCTGTTaGAATCCCTGCAGGAGGAGT +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLRNLSC*NPCRRS
Trigger: ACTCCTCCTGCAGGGATTTCAACAGCTGAGATTCCT...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTCGGGTAATGCTGGTTaGGACCAAGTCGAACATCTG +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGSGNAG*DQVEHL
Trigger: CAGATGTTCGACTTGGTCTCAACCAGCATTACCCGA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGCAGAGTCTCAGTGACTaGCACAGACTCAGTGTTCTG +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLQSLSD*HRLSVL
Trigger: CAGAACACTGAGTCTGTGGCAGTCACTGAGACTCTG...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTTCCTCAATCGCAGCTaGTATCTCGGGGTTGTCTTC +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGFLNRS*YLGVVF
Trigger: GAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGAGCTGTGTCTGTCCATaGTGCTTTCCCATCACTCTG +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQSCVCP*CFPITL
Trigger: CAGAGTGATGGGAAAGCAGCATGGACAGACACAGCT...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGACTCCATTTTTGGGCTaGACCGTCTGTCTCAGCGGC +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGRETPFLG*TVCLSG
Trigger: GCCGCTGAGACAGACGGTGCAGCCCAAAAATGGAGT...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGCAGCTGAAAGCAGCATaGTTATTCAGGCTGCCGATG +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLQLKAA*LFRLPM
Trigger: CATCGGCAGCCTGAATAAGCATGCTGCTTTCAGCTG...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTATGGCCAGGGCAGTCTTaGTTTGTAGAACAGCTTTGC +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLWPGQS*FVEQLC
Trigger: GCAAAGCTGTTCTACAAAGCAAGACTGCCCTGGCCA...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCTGGAACTGAGTTGCTaGTGCAGCCTTGACCTTTCT +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGLELSC*CSLDLS
Trigger: AGAAAGGTCAAGGCTGCAGCAGCAACTCAGTTCCAG...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCCTTCTCCGGATCAGTaGCATCAATGCACATCCACC +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVPSPDQ*HQCTST
Trigger: GGTGGATGTGCATTGATGCCACTGATCCGGAGAAGG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGCATCACAAGAGGGGTTaGGGAGAGGGACAGTCGGAA +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREHHKRG*GEGQSE
Trigger: TTCCGACTGTCCCTCTCCCCAACCCCTCTTGTGATG...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTAGCAGCAGACATGAGTaGCTCTACAGGAGGAATAGG +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGSSRHE*LYRRNR
Trigger: CCTATTCCTCCTGTAGAGCCACTCATGTCTGCTGCT...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp ACTGAATCTTCTTCACTGGGACGGAAATCCGCTAGCTaGGGAAGACCGCCACTGACCAGGAAACACCTCGTC +
Preference number: 4 (lower is better)
Translates to: TESSSLGRKSAS*GRPPLTRKHLV
Trigger: GACGAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAGTGAAGAAGATTCAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGAGTTTGTCCTGGGTCTaGAGAAGCTGCTTGAGCTTT +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLSLSWV*RSCLSF
Trigger: AAAGCTCAAGCAGCTTCTTCAGACCCAGGACAAACT...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTGCAGATCTGTTCTTCTaGAGGATCGCTTTCTGTACC +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGADLFF*RIAFCT
Trigger: GGTACAGAAAGCGATCCTTCAGAAGAACAGATCTGC...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTTGCTGCTGCAGCCTTaGCCTTTCTGCATTGTCTGG +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSALLLQP*PFCIVW
Trigger: CCAGACAATGCAGAAAGGTCAAGGCTGCAGCAGCAA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTATTCATTCGGCATGTCTaGTTCTTCCTCCCCATCTTC +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLFIRHV*FFLPIF
Trigger: GAAGATGGGGAGGAAGAAGCAGACATGCCGAATGAA...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCCCTCTGTTGTTGATATaGTCAGAGGCAGACTTAAGG +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLPLLLI*SEADLR
Trigger: CCTTAAGTCTGCCTCTGAGCATATCAACAACAGAGG...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGCAAACTCGTGGTGTGTaGATAACTCATCTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLQTRGV*ITHLGG
Trigger: TCCACCCAGATGAGTTATGCACACACCACGAGTTTG...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCTCAGGTCTGCCTTCTaGTTCGCAGATCTGTTCTTC +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVLRSAF*FADLFF
Trigger: GAAGAACAGATCTGCGAAGCAGAAGGCAGACCTGAG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTACAGCTTTGCTCTTCTaGACCTTCACGTGCAGGCTT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVTALLF*TFTCRL
Trigger: AAGCCTGCACGTGAAGGTGCAGAAGAGCAAAGCTGT...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAACTGGCTTACCACCTCTaGCAGAAGGGCTGGCTGCTC +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKLAYHL*QKGWLL
Trigger: GAGCAGCCAGCCCTTCTGCCAGAGGTGGTAAGCCAG...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCCTAACTTCGGTTTCTTaGAAGTCAGAGCTGTGTCTG +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLLTSVS*KSELCL
Trigger: CAGACACAGCTCTGACTTCCAAGAAACCGAAGTTAG...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACAATACAGATTCCCATaGGACTGGAGTCTTGCCTGT +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLQYRFP*DWSLAC
Trigger: ACAGGCAAGACTCCAGTCCCATGGGAATCTGTATTG...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGATTCTGTTCTTCTCCTaGGCAAGCCCAGTTCACATA +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQILFFS*ASPVHI
Trigger: TATGTGAACTGGGCTTGCTCAGGAGAAGAACAGAAT...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGGCTGACATGGAAACATaGATGTTTCAAGCCCCTCGC +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREADMET*MFQAPR
Trigger: GCGAGGGGCTTGAAACATTCATGTTTCCATGTCAGC...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCTACAGTTACTGGAGTaGGCAGACAGTCTATGCCAT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVLQLLE*ADSLCH
Trigger: ATGGCATAGACTGTCTGCTCACTCCAGTAACTGTAG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTGGCTGTGTGTCTGGTaGTTTACAAGGACTTGGGCT +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSAWLCVW*FTRTWA
Trigger: AGCCCAAGTCCTTGTAAATCACCAGACACACAGCCA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTGCCAAGATGTGCTTATaGAGCTCAGGCATGTTATCA +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGAKMCL*SSGMLS
Trigger: TGATAACATGCCTGAGCTGCATAAGCACATCTTGGC...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCCTCTTCTTGTCACTTaGAGATGCACACGCCAAGAT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVPLLVT*RCTRQD
Trigger: ATCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAGG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCTCATCCTCTTCTTTTaGACCTTCTGCAGAGCCCCT +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSALILFF*TFCRAP
Trigger: AGGGGCTCTGCAGAAGGTCCAAAAGAAGAGGATGAG...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACAATTGTAATGCCATGCTaGGTCTTCTCTTCAACCCTG +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTIVMPC*VFSSTL
Trigger: CAGGGTTGAAGAGAAGACCCAGCATGGCATTACAAT...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTTGCCCAAGTTGAGGTaGACTCGACTCATCTTTAGA +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGLPKLR*TRLIFR
Trigger: TCTAAAGATGAGTCGAGTCCACCTCAACTTGGGCAA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCACTCGGGCTCTGTGCTTaGTACATAGACATTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKALGLCA*YIDILG
Trigger: TCCCAGAATGTCTATGTACCAAGCACAGAGCCCGAG...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTTTAGGGAGTACAGGTaGACTGGCAGTCCTCCGTTT +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSAFREYR*TGSPPF
Trigger: AAACGGAGGACTGCCAGTCCACCTGTACTCCCTAAA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTATGGTGGTACTGAAATaGAGGTGGCTTAAAGCTCGG +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVMVVLK*RWLKAR
Trigger: CCGAGCTTTAAGCCACCTCCATTTCAGTACCACCAT...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCATGTTTCTGTCACTGCTaGCAGATGATGTGTGGCCAC +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKACFCHC*QMMCGH
Trigger: GTGGCCACACATCATCTGCCAGCAGTGACAGAAACA...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAACAGCCAGAGTCTCAGTaGCTGCCACAGACTCAGTGT +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKQPESQ*LPQTQC
Trigger: ACACTGAGTCTGTGGCAGTCACTGAGACTCTGGCTG...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCTCTGAAGAAGCTGCTTaGGCTTTGAAGACAAATAGA +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLSEEAA*ALKTNR
Trigger: TCTATTTGTCTTCAAAGCTCAAGCAGCTTCTTCAGA...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCACCTCTGACTTCTGTTTaGCACCGCTGGATAAATCCA +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKAPLTSV*HRWINP
Trigger: TGGATTTATCCAGCGGTGTCAAACAGAAGTCAGAGG...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGGCTTTTTATGCACACTaGGATCCAATACAGATTCCC +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLAFYAH*DPIQIP
Trigger: GGGAATCTGTATTGGATCTCAGTGTGCATAAAAAGC...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCAATCGGAAGAGGAGACTaGGCAGTGGCATTTGAGAAT +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKAIGRGD*AVAFEN
Trigger: ATTCTCAAATGCCACTGCTCAGTCTCCTCTTCCGAT...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCTTTGCAGCCGGCTGTaGCAAATGGTTCTCTTTGAA +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSALCSRL*QMVLFE
Trigger: TTCAAAGAGAACCATTTGGCACAGCCGGCTGCAAAG...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACAACACCCTTCTCTTTATaGAAAGACACCACCTCTGTT +
Preference number: 4 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTTPFSL*KDTTSV
Trigger: AACAGAGGTGGTGTCTTTCCATAAAGAGAAGGGTGT...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGGGCCATTCTTCAGCATaGACAGACAAATGTTTGGTT +
Preference number: 4 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQGHSSA*TDKCLV
Trigger: AACCAAACATTTGTCTGTCCATGCTGAAGAATGGCC...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGTACTGAAATGGAGGTaGCTTAAAGCTCGGGTAATG +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVVLKWR*LKARVM
Trigger: CATTACCCGAGCTTTAAGCCACCTCCATTTCAGTAC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACAGTATTTGCATGGGTaGAGTTCTTTAACTTCACCA +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLQYLHG*SSLTSP
Trigger: TGGTGAAGTTAAAGAACTTCACCCATGCAAATACTG...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTTTCGATGGTGGTACTaGAATGGAGGTGGCTTAAAG +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSAFRWWY*NGGGLK
Trigger: CTTTAAGCCACCTCCATTTCAGTACCACCATCGAAA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCGATCAGTGGCATCAATaGACATCCACCCCAAATTTG +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSADQWHQ*TSTPNL
Trigger: CAAATTTGGGGTGGATGTGCATTGATGCCACTGATC...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCGATCTGTGTGCCAAATaGTTTCCCACAGTACTTGCA +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSADLCAK*FPTVLA
Trigger: TGCAAGTACTGTGGGAAACCATTTGGCACACAGATC...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCCACTTTCAAACTCGTaGTGTGTGCATAACTCATCT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVPLSNS*CVHNSS
Trigger: AGATGAGTTATGCACACACCACGAGTTTGAAAGTGG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAAAGGCTTCGGGTGATTaGGCCCCCGCTCCGCTCTCT +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKKASGD*APAPLS
Trigger: AGAGAGCGGAGCGGGGGCCCAATCACCCGAAGCCTT...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp TCAACCATAGTAGCCCTGAAAAAGACAGCCCCTCTCTaGTGTGACAACTCTCCCAAGTTCTGTCCTCCCACT +
Preference number: 4 (lower is better)
Translates to: STIVALKKTAPL*CDNSPKFCPPT
Trigger: AGTGGGAGGACAGAACTTGGGAGAGTTGTCACACAAGAGAGGGGCTGTCTTTTTCAGGGCTACTATGGTTGA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp GCCCAGCAACATTTTCCAAGTTTGACTGAAAGCAGTTaGCTAAGGCTTTGGGTTCGTGCGGTTTTTCCCGGC +
Preference number: 4 (lower is better)
Translates to: AQQHFPSLTESS*LRLWVRAVFPG
Trigger: GCCGGGAAAAACCGCACGAACCCAAAGCCTTAGCAAACTGCTTTCAGTCAAACTTGGAAAATGTTGCTGGGC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTATTCCTTTCACAATGCTaGCATGGAAACATGAATGTT +
Preference number: 4 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLFLSQC*HGNMNV
Trigger: AACATTCATGTTTCCATGTCAGCATTGTGAAAGGAA...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGAAGCTGCTTGAGCTTTaGAGACAAATAGACACCCTT +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREKLLEL*RQIDTL
Trigger: AAGGGTGTCTATTTGTCTTCAAAGCTCAAGCAGCTT...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCACGGAAGCCATTATTTTaGTGGTCGTGTAAAGCTCTT +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKARKPLF*WSCKAL
Trigger: AAGAGCTTTACACGACCATCAAAATAATGGCTTCCG...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTTTTTGCCCTCAACATaGGTAATCTTAGCCATTCTT +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGFLPST*VILAIL
Trigger: AAGAATGGCTAAGATTACTCATGTTGAGGGCAAAAA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
49% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCTTACCCTTAAAAAGCTaGACACAAAACTCACATTTG +
Preference number: 4 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLLPLKS*TQNSHL
Trigger: CAAATGTGAGTTTTGTGTGCAGCTTTTTAAGGGTAA...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAGGTGCCTGCATGCTCTaGATCTTGATCTCCGTATCT +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKGACML*ILISVS
Trigger: AGATACGGAGATCAAGATGCAGAGCATGCAGGCACC...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGATGTCGTCTCATATTaGTGTGAGTTCCAAATACCT +
Preference number: 4 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVDVVSY*CEFQIP
Trigger: AGGTATTTGGAACTCACACCAATATGAGACGACATC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAATGTGCTGTGGAGAACTaGGGGGAGAGCTGGTGCGTC +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKCAVEN*GESWCV
Trigger: GACGCACCAGCTCTCCCCCCAGTTCTCCACAGCACA...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAGCCAACAACCTCAGGTaGAGACTCAGCAGTGGGGGC +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKANNLR*RLSSGG
Trigger: GCCCCCACTGCTGAGTCTCCACCTGAGGTTGTTGGC...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp AGCAGTGGACTCCTGAACCTCAAAGGAGGAAATGACTaGAAAGCTGGCAGCTCCAGTTGCTTAGGGAGAAAA +
Preference number: 4 (lower is better)
Translates to: SSGLLNLKGGND*KAGSSSCLGRK
Trigger: TTTTCTCCCTAAGCAACTGGAGCTGCCAGCTTTCAAGTCATTTCCTCCTTTGAGGTTCAGGAGTCCACTGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
3UTR CAA 72 bp GAGAATCCCCCACGAGCCCAGCAACATTTTCCAAGTTaGACTGAAAGCAGTTTGCTAAGGCTTTGGGTTCGT +
Preference number: 4 (lower is better)
Translates to: ENPPRAQQHFPS*TESSLLRLWVR
Trigger: ACGAACCCAAAGCCTTAGCAAACTGCTTTCAGTCAAACTTGGAAAATGTTGCTGGGCTCGTGGGGGATTCTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGCCAAATGGTTCTCTTTaGATTCCTTGCCTTCAGAAT +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREPNGSL*IPCLQN
Trigger: ATTCTGAAGGCAAGGAATTCAAAGAGAACCATTTGG...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGATCAGAATCTGTCTCTaGTTTAATTTTAGGGAGTAC +
Preference number: 4 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLIRICL*FNFREY
Trigger: GTACTCCCTAAAATTAAAGCAGAGACAGATTCTGAT...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTACATTATTCCTAACCTaGGATCTCTTCTTCTTATCA +
Preference number: 4 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGTLFLT*DLFFLS
Trigger: TGATAAGAAGAAGAGATCCCAGGTTAGGAATAATGT...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTTCACACCGTATTTCTaGTTCTTTCACAGAGCTTTC +
Preference number: 4 (lower is better)
Translates to: DQIGAEETLPKSSQASSAFTPYF*FFHRAF
Trigger: GAAAGCTCTGTGAAAGAACCAGAAATACGGTGTGAA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAATTCAGAAGTTTCAGTTaGCACACTCCGTGGCTCTTC +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKFRSFS*HTPWLF
Trigger: GAAGAGCCACGGAGTGTGCCAACTGAAACTTCTGAA...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR TCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAGCTGCCCCATCCGTCTaGAGGCATTTTTCCCAGAGT +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKAAPSV*RHFSQS
Trigger: ACTCTGGGAAAAATGCCTTCAGACGGATGGGGCAGC...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAAGGATTGTAATGCCATaGTGGGTCTTCTCTTCAACC +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKRIVMP*WVFSST
Trigger: GGTTGAAGAGAAGACCCAGCATGGCATTACAATCCT...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAGGCAAACTCGGCATATaGTCCACATGGGCCTTGCTG +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKGKLGI*STWALL
Trigger: CAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCC...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAGGTCTTGCCCAAGGGTaGCTGCATGCTCTGCATCTT +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKGLAQG*LHALHL
Trigger: AAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACC...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGTTCCAAATACCTTTTTaGAGTATTTGCATGGGTGAA +
Preference number: 4 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREFQIPF*SICMGE
Trigger: TTCACCCATGCAAATACTGCAAAAAGGTATTTGGAA...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCAGATGCTGCTGTAAATTaGATAAGAAGGCAAATTCTT +
Preference number: 4 (lower is better)
Translates to: GAEETLPKSSQASSAPKADAAVN*IRRQIL
Trigger: AAGAATTTGCCTTCTTATGCAATTTACAGCAGCATC...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAGGTCTGTTCTTTTCTTaGTGGCCAGGGCAGTCTTGC +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKGLFFS*WPGQSC
Trigger: GCAAGACTGCCCTGGCCAGCAAGAAAAGAACAGACC...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAATTCACAATGCTGACATaGAAACATGAATGTTTCAAG +
Preference number: 4 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKFTMLT*KHECFK
Trigger: CTTGAAACATTCATGTTTCCATGTCAGCATTGTGAA...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAACTGGCAGATGATGTGTaGCCACCTTTCTTAGATGAA +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKLADDV*PPFLDE
Trigger: TTCATCTAAGAAAGGTGGCCACACATCATCTGCCAG...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR GCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAATATGCCATACAAGTGTaGAGAGTTAGACTCCATCTC +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKYAIQV*RVRLHL
Trigger: GAGATGGAGTCTAACTCTGCACACTTGTATGGCATA...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAACCAAGTCGAACATCTaGCTCTTTCGTCTTTATTCC +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKTKSNI*LFRLYS
Trigger: GGAATAAAGACGAAAGAGCCAGATGTTCGACTTGGT...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CCA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAAGTAGTGAAAGTCTGTaGGATATTGTGGGTGGTGAA +
Preference number: 4 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKSSESL*DIVGGE
Trigger: TTCACCACCCACAATATCCCACAGACTTTCACTACT...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GGCCTCCTCTCTAGCCCTGGGAGCGTGGGGAGGAGGGGTGGCGCCTaGGGAGCCTTCAGAAGTTTCAGTTGGCACACTCCGTGGCTCTTC +
Preference number: 5 (lower is better)
Translates to: GLLSSPGSVGRRGGA*GAFRSFSWHTPWLF
Trigger: GAAGAGCCACGGAGTGTGCCAACTGAAACTTCTGAAGGCTCCCCAGGCGCCACCCCTCCTCCCCACGCTCCCAGGGCTAGAGAGGAGGCC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TGGGCAGGGCCTGTACTCCGAGCTCGGGTCTTGCCCAAGGGTGCCTaGATGCTCTGCATCTTGATCTCCGTATCTGCGGTGCGCCTCCGG +
Preference number: 5 (lower is better)
Translates to: WAGPVLRARVLPKGA*MLCILISVSAVRLR
Trigger: CCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGGCCCTGCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp GGCTTGGGCAGGGCCTGTACTCCGAGCTCGGGTCTTGCCCAAGGGTaGCTGCATGCTCTGCATCTTGATCTCCGTATCTGCGGTGCGCCT +
Preference number: 5 (lower is better)
Translates to: GLGRACTPSSGLAQG*LHALHLDLRICGAP
Trigger: AGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGGCCCTGCCCAAGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TCTTCCCTCTCCGGCTCTTCGGGGAGCTCCGCTTGCTCCGGGCGCTaGCTCGCTCTTCCTCAATCGCAGCTGCTATCTCGGGGTTGTCTT +
Preference number: 5 (lower is better)
Translates to: SSLSGSSGSSACSGR*LALPQSQLLSRGCL
Trigger: AAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAAGAGCCGGAGAGGGAAGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp GCTCCGCTTGCTCCGGGCGCTGGCTCGCTCTTCCTCAATCGCAGCTaGTATCTCGGGGTTGTCTTCCCCATTGTACCAGACCAGGAGCTC +
Preference number: 5 (lower is better)
Translates to: APLAPGAGSLFLNRS*YLGVVFPIVPDQEL
Trigger: GAGCTCCTGGTCTGGTACAATGGGGAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS GCA 90 bp CCTGTGATTTCTTCTTCCCTCTCCGGCTCTTCGGGGAGCTCCGCTTaGTCCGGGCGCTGGCTCGCTCTTCCTCAATCGCAGCTGCTATCT +
Preference number: 5 (lower is better)
Translates to: PVISSSLSGSSGSSA*SGRWLALPQSQLLS
Trigger: AGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAAGAGCCGGAGAGGGAAGAAGAAATCACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp CCTGTACTCCGAGCTCGGGTCTTGCCCAAGGGTGCCTGCATGCTCTaGATCTTGATCTCCGTATCTGCGGTGCGCCTCCGGGGATTGCTA +
Preference number: 5 (lower is better)
Translates to: PVLRARVLPKGACML*ILISVSAVRLRGLL
Trigger: TAGCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GAGACGCCCCTCCCGGGCAGGATGGCTGCACCACAGAGCACGGTTCTGGGCCATCCTCGCCAGGCGCGATaGGCTTTAAGGTTTTATAGT +
Preference number: 5 (lower is better)
Translates to: ETPLPGRMAAPQSTVLGHPRQAR*ALRFYS
Trigger: ACTATAAAACCTTAAAGCCAATCGCGCCTGGCGAGG...ATGGCCCAGAACCGTGCTCTGTGGTGCAGCCATCCTGCCCGGGAGGGGCGTCTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCAGGAGGGCAGCGAGGCTaGGGCAGGGCCTGTACTCCG +
Preference number: 5 (lower is better)
Translates to: GAEETLPKSSQASSAPKAGGQRG*GRACTP
Trigger: CGGAGTACAGGCCCTGCCCAAGCCTCGCTGCCCTCC...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp TCCGAGCTCGGGTCTTGCCCAAGGGTGCCTGCATGCTCTGCATCTTaGTCTCCGTATCTGCGGTGCGCCTCCGGGGATTGCTACTACTGT +
Preference number: 5 (lower is better)
Translates to: SELGSCPRVPACSAS*SPYLRCASGDCYYC
Trigger: ACAGTAGTAGCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GATATACACATCATCTGCGTCCCCGTCCTCCTCGGGCTCTGTGCTTaGTACATAGACATTCTGGGAGGGCGGGGCCTGCTCTGCAGGTGG +
Preference number: 5 (lower is better)
Translates to: DIHIICVPVLLGLCA*YIDILGGRGLLCRW
Trigger: CCACCTGCAGAGCAGGCCCCGCCCTCCCAGAATGTCTATGTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGATGTGTATATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GAAGCTTCCGCAGGCTCTTCTGGCAAACTCGGCATATGCTCCACATaGGCCTTGCTGGGGTCTGTGAAGTTCTGGGGCCTCAGGGTCCCA +
Preference number: 5 (lower is better)
Translates to: EASAGSSGKLGICST*ALLGSVKFWGLRVP
Trigger: TGGGACCCTGAGGCCCCAGAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCCAGAAGAGCCTGCGGAAGCTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAATTCGGGGAGCTCCGCTaGCTCCGGGCGCTGGCTCGC +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKFGELR*LRALAR
Trigger: GCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAA...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTCAAGCCCCTCGCCGTaGGCCTCCTCTCTAGCCCTG +
Preference number: 5 (lower is better)
Translates to: DQIGAEETLPKSSQASSASSPSP*ASSLAL
Trigger: CAGGGCTAGAGAGGAGGCCAACGGCGAGGGGCTTGA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCCATGGGACTGGAGTCTaGCCTGTGCCCTCTGACTTC +
Preference number: 5 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLHGTGV*PVPSDF
Trigger: GAAGTCAGAGGGCACAGGCAAGACTCCAGTCCCATG...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp GACCTCACAGTCTGTGACTTCTTGTTTCCCATCTGCCCCTGGCTGTaGCTCGCAGGCAGGAAGAGGGATGGCCACCTGTGGAACTGCATC +
Preference number: 5 (lower is better)
Translates to: DLTVCDFLFPICPWL*LAGRKRDGHLWNCI
Trigger: GATGCAGTTCCACAGGTGGCCATCCCTCTTCCTGCCTGCGAGTCACAGCCAGGGGCAGATGGGAAACAAGAAGTCACAGACTGTGAGGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp CTGGCAAACTCGGCATATGCTCCACATGGGCCTTGCTGGGGTCTGTaGAGTTCTGGGGCCTCAGGGTCCCACTTTCAAACTCGTGGTGTG +
Preference number: 5 (lower is better)
Translates to: LANSAYAPHGPCWGL*SSGASGSHFQTRGV
Trigger: CACACCACGAGTTTGAAAGTGGGACCCTGAGGCCCCAGAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp GCTGCCGATGTACGTGAACTCCCTGTCACAGTAAGGGCAGATATGTaGGGACGCCTCGGAAGTGTCCCTCAGGTCTGCCTTCTGCTTCGC +
Preference number: 5 (lower is better)
Translates to: AADVRELPVTVRADM*GRLGSVPQVCLLLR
Trigger: GCGAAGCAGAAGGCAGACCTGAGGGACACTTCCGAGGCGTCCTCACATATCTGCCCTTACTGTGACAGGGAGTTCACGTACATCGGCAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TCCTCTCTAGAAGCTTCCGCAGGCTCTTCTGGCAAACTCGGCATATaGTCCACATGGGCCTTGCTGGGGTCTGTGAAGTTCTGGGGCCTC +
Preference number: 5 (lower is better)
Translates to: SSLEASAGSSGKLGI*STWALLGSVKFWGL
Trigger: GAGGCCCCAGAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCCAGAAGAGCCTGCGGAAGCTTCTAGAGAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GTGGCTGCGGCTCTTCTAGGAGGCCTCCTTTTCGCCGGACACCTTTaGGAATCAGGTGGCGTTCGTGAACTCTACGCTGATGTCGTCTCA +
Preference number: 5 (lower is better)
Translates to: VAAALLGGLLFAGHL*ESGGVRELYADVVS
Trigger: TGAGACGACATCAGCGTAGAGTTCACGAACGCCACCTGATTCCCAAAGGTGTCCGGCGAAAAGGAGGCCTCCTAGAAGAGCCGCAGCCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TTCACTCAGGTCCGCAGCAGCTGCCAGCTGAAGGCTTCGGGTGATTaGGCCCCCGCTCCGCTCTCTAGATTTTACTATGAACCGGTCTGT +
Preference number: 5 (lower is better)
Translates to: FTQVRSSCQLKASGD*APAPLSRFYYEPVC
Trigger: ACAGACCGGTTCATAGTAAAATCTAGAGAGCGGAGCGGGGGCCCAATCACCCGAAGCCTTCAGCTGGCAGCTGCTGCGGACCTGAGTGAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTGGGTTGTCTTCCCCATaGTACCAGACCAGGAGCTCC +
Preference number: 5 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGGLSSP*YQTRSS
Trigger: GGAGCTCCTGGTCTGGTACAATGGGGAAGACAACCC...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACATGCTCCACATGGGCCTaGCTGGGGTCTGTGAAGTTC +
Preference number: 5 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTCSTWA*LGSVKF
Trigger: GAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCA...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp AGGTGCAGAAGCCAAAGGCCTCTCATCCTCTTCTTTTGGACCTTCTaGAGAGCCCCTCATGTTTGCAGAGGTGGAGTCCAGCTCGCTCGC +
Preference number: 5 (lower is better)
Translates to: RCRSQRPLILFFWTF*RAPHVCRGGVQLAR
Trigger: GCGAGCGAGCTGGACTCCACCTCTGCAAACATGAGGGGCTCTGCAGAAGGTCCAAAAGAAGAGGATGAGAGGCCTTTGGCTTCTGCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TGCATCCTGGCTTACCACCTCTGGCAGAAGGGCTGGCTGCTCAGGTaGAGAAGCCAAAGGCCTCTCATCCTCTTCTTTTGGACCTTCTGC +
Preference number: 5 (lower is better)
Translates to: CILAYHLWQKGWLLR*RSQRPLILFFWTFC
Trigger: GCAGAAGGTCCAAAAGAAGAGGATGAGAGGCCTTTGGCTTCTGCACCTGAGCAGCCAGCCCTTCTGCCAGAGGTGGTAAGCCAGGATGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp CTCGGCATATGCTCCACATGGGCCTTGCTGGGGTCTGTGAAGTTCTaGGGCCTCAGGGTCCCACTTTCAAACTCGTGGTGTGTGCATAAC +
Preference number: 5 (lower is better)
Translates to: LGICSTWALLGSVKF*GLRVPLSNSWCVHN
Trigger: GTTATGCACACACCACGAGTTTGAAAGTGGGACCCTGAGGCCCCAGAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCAGAGCCCCTCATGTTaGCAGAGGTGGAGTCCAGCT +
Preference number: 5 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVQSPSC*QRWSPA
Trigger: AGCTGGACTCCACCTCTGCAAACATGAGGGGCTCTG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGGCATCACAAGAGGGGTaGGGGAGAGGGACAGTCGGA +
Preference number: 5 (lower is better)
Translates to: EVLKGDPAQFAHAKRGREASQEG*GRGTVG
Trigger: TCCGACTGTCCCTCTCCCCAACCCCTCTTGTGATGC...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTGCTGGGGCCTCTTCCTaGCGTTTCAGACCTTCACTC +
Preference number: 5 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVAGASS*RFRPSL
Trigger: GAGTGAAGGTCTGAAACGCAAGGAAGAGGCCCCAGC...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TGGCTGCTCAGGTGCAGAAGCCAAAGGCCTCTCATCCTCTTCTTTTaGACCTTCTGCAGAGCCCCTCATGTTTGCAGAGGTGGAGTCCAG +
Preference number: 5 (lower is better)
Translates to: WLLRCRSQRPLILFF*TFCRAPHVCRGGVQ
Trigger: CTGGACTCCACCTCTGCAAACATGAGGGGCTCTGCAGAAGGTCCAAAAGAAGAGGATGAGAGGCCTTTGGCTTCTGCACCTGAGCAGCCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACATCATGCCGCCTCCTGTaGATCTGTGTGCCAAATGGT +
Preference number: 5 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTSCRLL*ICVPNG
Trigger: ACCATTTGGCACACAGATCAACAGGAGGCGGCATGA...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGCTGGCCAGGGCAGTCTaGCTTTGTAGAACAGCTTTG +
Preference number: 5 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLLARAV*LCRTAL
Trigger: CAAAGCTGTTCTACAAAGCAAGACTGCCCTGGCCAG...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTAGTTGCTGCTGCAGCCTaGACCTTTCTGCATTGTCTG +
Preference number: 5 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLVAAAA*TFLHCL
Trigger: CAGACAATGCAGAAAGGTCAAGGCTGCAGCAGCAAC...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp GCCATGCTGGGTCTTCTCTTCAACCCTGTTTCGTGGCGCCTTTCATaGCGCCTCCTGTTGATCTGTGTGCCAAATGGTTTCCCACAGTAC +
Preference number: 5 (lower is better)
Translates to: AMLGLLFNPVSWRLS*RLLLICVPNGFPQY
Trigger: GTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGTTGAAGAGAAGACCCAGCATGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp AAGCCCAGTTCACATAGCGGAGCCAGTTGCCCTTCTCCGGATCAGTaGCATCAATGCACATCCACCCCAAATTTGGGTAGTACACCTCCC +
Preference number: 5 (lower is better)
Translates to: KPSSHSGASCPSPDQ*HQCTSTPNLGSTPP
Trigger: GGGAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGAACTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS CCA 90 bp AAGCCCAGTTCACATAGCGGAGCCAGTTGCCCTTCTCCGGATCAGTaGCATCAATGCACATCCACCCCAAATTTGGGTAGTACACCTGGG +
Preference number: 5 (lower is better)
Translates to: KPSSHSGASCPSPDQ*HQCTSTPNLGSTPG
Trigger: CCCAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGAACTGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134791.2
CDS-3UTR CAA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTGGTTTCCCACAGTACTaGCACTTGAAAGCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGGFPQY*HLKAWL
Trigger: CAACCACGCTTTCAAGTGCAAGTACTGTGGGAAACC...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCTGGAGAGGGGCACTGTaGAGGAGAGGCATCACAAGA +
Preference number: 5 (lower is better)
Translates to: DQIGAEETLPKSSQASSAWRGAL*RRGITR
Trigger: TCTTGTGATGCCTCTCCTCAACAGTGCCCCTCTCCA...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGACCTCTTCTTGTCACTaGCAGATGCACACGCCAAGA +
Preference number: 5 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLTSSCH*QMHTPR
Trigger: TCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAGGT...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGGGAGTGTACCTCTTCTaGTCACTTGCAGATGCACAC +
Preference number: 5 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLGVYLF*SLADAH
Trigger: GTGTGCATCTGCAAGTGACAAGAAGAGGTACACTCC...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp GCAACTCGAGTCAGTAGCAAGTTCAGGATCTGGCTGTGTGTCTGGTaGTTTACAAGGACTTGGGCTCCTGGTCGCCTCTGGTGTGCTTTC +
Preference number: 5 (lower is better)
Translates to: ATRVSSKFRIWLCVW*FTRTWAPGRLWCAF
Trigger: GAAAGCACACCAGAGGCGACCAGGAGCCCAAGTCCTTGTAAATCACCAGACACACAGCCAGATCCTGAACTTGCTACTGACTCGAGTTGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TCTGTTCTTCTCCTGAGCAAGCCCAGTTCACATAGCGGAGCCAGTTaGCCTTCTCCGGATCAGTGGCATCAATGCACATCCACCCCAAAT +
Preference number: 5 (lower is better)
Translates to: SVLLLSKPSSHSGAS*PSPDQWHQCTSTPN
Trigger: ATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGAACTGGGCTTGCTCAGGAGAAGAACAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS-3UTR CAA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGACAGTCTTGCCCAAGTaGAGGTGGACTCGACTCATC +
Preference number: 5 (lower is better)
Translates to: EVLKGDPAQFAHAKRGRETVLPK*RWTRLI
Trigger: GATGAGTCGAGTCCACCTCAACTTGGGCAAGACTGT...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CTGGGACGGAAATCCGCTAGCTTGGGAAGACCGCCACTGACCAGGAAACACCTCAAAGTCTGTGGGATATaGTGGGTGGTGAAGTTTGTG +
Preference number: 5 (lower is better)
Translates to: LGRKSASLGRPPLTRKHLKVCGI*WVVKFV
Trigger: CACAAACTTCACCACCCACAATATCCCACAGACTTT...GAGGTGTTTCCTGGTCAGTGGCGGTCTTCCCAAGCTAGCGGATTTCCGTCCCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTCACTTCAGGTGCTGATGTTATCAACACTCTaGCCACACTTTGTGCAGCGG +
Preference number: 5 (lower is better)
Translates to: GQTAGPFGFTDSRSLQVLMLSTL*PHFVQR
Trigger: CCGCTGCACAAAGTGTGGCAAGAGTGTTGATAACAT...CAGCACCTGAAGTGACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGCCCATGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTTGACCTTTCTGCATaGTCTGGTGATATAAGGGGC +
Preference number: 5 (lower is better)
Translates to: CPCEGLQGPFFLDQSVPLLDLSA*SGDIRG
Trigger: GCCCCTTATATCACCAGACAATGCAGAAAGGTCAAG...TAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACATGGGCA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TCACATAGCGGAGCCAGTTGCCCTTCTCCGGATCAGTGGCATCAATaGACATCCACCCCAAATTTGGGTAGTACACCTGGGATCTCTTCT +
Preference number: 5 (lower is better)
Translates to: SHSGASCPSPDQWHQ*TSTPNLGSTPGISS
Trigger: AGAAGAGATCCCAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134791.2
CDS CCA 90 bp GAGGATTGTAATGCCATGCTGGGTCTTCTCTTCAACCCTGTTTCGTaGCGCCTTTCATGCCGCCTCCTGTTGATCTGTGTGCCAAATGGT +
Preference number: 5 (lower is better)
Translates to: EDCNAMLGLLFNPVS*RLSCRLLLICVPNG
Trigger: ACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGTTGAAGAGAAGACCCAGCATGGCATTACAATCCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GGCTGTTACCCCAATCCCCATAGGGTTTCGATGGTGGTACTGAAATaGAGGTGGCTTAAAGCTCGGGTAATGCTGGTTGAGACCAAGTCG +
Preference number: 5 (lower is better)
Translates to: GCYPNPHRVSMVVLK*RWLKARVMLVETKS
Trigger: CGACTTGGTCTCAACCAGCATTACCCGAGCTTTAAGCCACCTCCATTTCAGTACCACCATCGAAACCCTATGGGGATTGGGGTAACAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GACCAGATCGGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCACATCCACCCCAAATTaGGGTAGTACACCTCCCACA +
Preference number: 5 (lower is better)
Translates to: DQIGAEETLPKSSQASSATSTPN*GSTPPT
Trigger: TGTGGGAGGTGTACTACCCAAATTTGGGGTGGATGT...GGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCCGATCTGGTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CAGTGCTCTCTGCAGGGCAGACTGCTGGTCCCTTTGGCTTCACTGATTCCAGGTTCCTCTTCCTTCATATaGTTGACCTCACAGTCTGTG +
Preference number: 5 (lower is better)
Translates to: QCSLQGRLLVPLASLIPGSSSFI*LTSQSV
Trigger: CACAGACTGTGAGGTCAACAATATGAAGGAAGAGGA...ACCTGGAATCAGTGAAGCCAAAGGGACCAGCAGTCTGCCCTGCAGAGAGCACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGTGAGGGTCTCCAGGGACCCTTTTTCCTGGACCAGTCAGTCCCCTTACTGCAGCTAGCCCCTGCTTCGTaGCAAATTTCCTTTCACAAT +
Preference number: 5 (lower is better)
Translates to: CEGLQGPFFLDQSVPLLQLAPAS*QISFHN
Trigger: ATTGTGAAAGGAAATTTGCAACGAAGCAGGGGCTAG...CTGCAGTAAGGGGACTGACTGGTCCAGGAAAAAGGGTCCCTGGAGACCCTCACA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAATCTGCTGAATGTCTCTaGGACAGCGCTCTGCCCACC +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKSAECL*DSALPT
Trigger: GGTGGGCAGAGCGCTGTCCAAGAGACATTCAGCAGA...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACAGCATTTTTCCCAGAGTaGTCTAAAACCAGCACTCCA +
Preference number: 5 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTAFFPE*SKTSTP
Trigger: TGGAGTGCTGGTTTTAGACAACTCTGGGAAAAATGC...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TCACATAGCGGAGCCAGTTGCCCTTCTCCGGATCAGTGGCATCAATaGACATCCACCCCAAATTTGGGTAGTACACCTCCCACATGTATA +
Preference number: 5 (lower is better)
Translates to: SHSGASCPSPDQWHQ*TSTPNLGSTPPTCI
Trigger: TATACATGTGGGAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS CCA 90 bp ACTCTTGCCACACTTTGTGCAGCGGATGGCAGTAGTGAAAGTCTGTaGGATATTGTGGGTGGTGAAGTTTGTGGCTGTTACCCCAATCCC +
Preference number: 5 (lower is better)
Translates to: TLATLCAADGSSESL*DIVGGEVCGCYPNP
Trigger: GGGATTGGGGTAACAGCCACAAACTTCACCACCCACAATATCCCACAGACTTTCACTACTGCCATCCGCTGCACAAAGTGTGGCAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp AACCAGCACTCCATTTTTGGGCTGCACCGTCTGTCTCAGCGGCACTaGGTTTTTCTTAGGAGTGTACCTCTTCTTGTCACTTGCAGATGC +
Preference number: 5 (lower is better)
Translates to: NQHSIFGLHRLSQRH*VFLRSVPLLVTCRC
Trigger: GCATCTGCAAGTGACAAGAAGAGGTACACTCCTAAGAAAAACCCAGTGCCGCTGAGACAGACGGTGCAGCCCAAAAATGGAGTGCTGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAGCTGCTATCTCGGGGTaGTCTTCCCCATTGTACCAG +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKAAISG*SSPLYQ
Trigger: CTGGTACAATGGGGAAGACAACCCCGAGATAGCAGC...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGCTCCTGAGGCTGGGACCACACACATGCACCAGCACACACATACATGCACATCTTCCTTCATATTGTaGACCTCACAGTCTGTGACT +
Preference number: 5 (lower is better)
Translates to: PAPEAGTTHMHQHTHTCTSSFIL*TSQSVT
Trigger: AGTCACAGACTGTGAGGTCAACAATATGAAGGAAGA...TGTGCATGTATGTGTGTGCTGGTGCATGTGTGTGGTCCCAGCCTCAGGAGCAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTCCACAGTACTTGCACTaGAAAGCGTGGTTGATTGTA +
Preference number: 5 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVPQYLH*KAWLIV
Trigger: TACAATCAACCACGCTTTCAAGTGCAAGTACTGTGG...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAAGAGATGCTTCCAGGTaGTCCCCAGAGGACACCACA +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKRDASR*SPEDTT
Trigger: TGTGGTGTCCTCTGGGGACAACCTGGAAGCATCTCT...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGCTTTGTAGAACAGCTTaGCTCTTCTGCACCTTCACG +
Preference number: 5 (lower is better)
Translates to: EVLKGDPAQFAHAKRGRELCRTA*LFCTFT
Trigger: CGTGAAGGTGCAGAAGAGCAAAGCTGTTCTACAAAG...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAACGGTCTGTTCTTTTCTaGCTGGCCAGGGCAGTCTTG +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKRSVLF*LARAVL
Trigger: CAAGACTGCCCTGGCCAGCAAGAAAAGAACAGACCG...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TTCGTGGCGCCTTTCATGCCGCCTCCTGTTGATCTGTGTGCCAAATaGTTTCCCACAGTACTTGCACTTGAAAGCGTGGTTGATTGTAGA +
Preference number: 5 (lower is better)
Translates to: FVAPFMPPPVDLCAK*FPTVLALESVVDCR
Trigger: TCTACAATCAACCACGCTTTCAAGTGCAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TACCCCAATCCCCATAGGGTTTCGATGGTGGTACTGAAATGGAGGTaGCTTAAAGCTCGGGTAATGCTGGTTGAGACCAAGTCGAACATC +
Preference number: 5 (lower is better)
Translates to: YPNPHRVSMVVLKWR*LKARVMLVETKSNI
Trigger: GATGTTCGACTTGGTCTCAACCAGCATTACCCGAGCTTTAAGCCACCTCCATTTCAGTACCACCATCGAAACCCTATGGGGATTGGGGTA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GGAGCTGAGGAAACATTACCAAAATCGTCTCAGGCATCCTCCGCCCCAAAGGCATCTAACTTCGGTTTCTaGGAAGTCAGAGCTGTGTCT +
Preference number: 5 (lower is better)
Translates to: GAEETLPKSSQASSAPKASNFGF*EVRAVS
Trigger: AGACACAGCTCTGACTTCCAAGAAACCGAAGTTAGA...TGCCTTTGGGGCGGAGGATGCCTGAGACGATTTTGGTAATGTTTCCTCAGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp AGACACCCTTCTCTTTATGGAAAGACACCACCTCTGTTGTTGATATaGTCAGAGGCAGACTTAAGGAACACGAGGGTGCCGTGGAATCAG +
Preference number: 5 (lower is better)
Translates to: RHPSLYGKTPPLLLI*SEADLRNTRVPWNQ
Trigger: CTGATTCCACGGCACCCTCGTGTTCCTTAAGTCTGCCTCTGAGCATATCAACAACAGAGGTGGTGTCTTTCCATAAAGAGAAGGGTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp AACTCCACGCTGGTGAGTCACTACGACTTTCTAACTTCGGTTTCTTaGAAGTCAGAGCTGTGTCTGTCCATGCTGCTTTCCCATCACTCT +
Preference number: 5 (lower is better)
Translates to: NSTLVSHYDFLTSVS*KSELCLSMLLSHHS
Trigger: AGAGTGATGGGAAAGCAGCATGGACAGACACAGCTCTGACTTCCAAGAAACCGAAGTTAGAAAGTCGTAGTGACTCACCAGCGTGGAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAACACCACCTCTGTTGTaGATATGCTCAGAGGCAGAC +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKTPPLL*ICSEAD
Trigger: GTCTGCCTCTGAGCATATCAACAACAGAGGTGGTGT...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp GTTCTCAGAGATGTTGCTAGAAATGTCCATGATATACACATCATCTaGGTCCCCGTCCTCCTCGGGCTCTGTGCTTGGTACATAGACATT +
Preference number: 5 (lower is better)
Translates to: VLRDVARNVHDIHII*VPVLLGLCAWYIDI
Trigger: AATGTCTATGTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGATGTGTATATCATGGACATTTCTAGCAACATCTCTGAGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp TACCTCTTCTTGTCACTTGCAGATGCACACGCCAAGATGTGCTTATaGAGCTCAGGCATGTTATCAACACTCTTGCCACACTTTGTGCAG +
Preference number: 5 (lower is better)
Translates to: YLFLSLADAHAKMCL*SSGMLSTLLPHFVQ
Trigger: CTGCACAAAGTGTGGCAAGAGTGTTGATAACATGCCTGAGCTGCATAAGCACATCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp GGAGTGTACCTCTTCTTGTCACTTGCAGATGCACACGCCAAGATGTaGTTATGCAGCTCAGGCATGTTATCAACACTCTTGCCACACTTT +
Preference number: 5 (lower is better)
Translates to: GVYLFLSLADAHAKM*LCSSGMLSTLLPHF
Trigger: AAAGTGTGGCAAGAGTGTTGATAACATGCCTGAGCTGCATAAGCACATCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAGGTACACTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GAAGTGTTGAAGGGTGACCCAGCACAGTTTGCACATGCAAAGAGAGGGAGGGAGAGGTTCTCAGAGATGTaGCTAGAAATGTCCATGATA +
Preference number: 5 (lower is better)
Translates to: EVLKGDPAQFAHAKRGRERFSEM*LEMSMI
Trigger: TATCATGGACATTTCTAGCAACATCTCTGAGAACCT...CTCCCTCCCTCTCTTTGCATGTGCAAACTGTGCTGGGTCACCCTTCAACACTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAAAGACACCACCTCTGTaGTTGATATGCTCAGAGGCA +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKKTPPL*LICSEA
Trigger: TGCCTCTGAGCATATCAACAACAGAGGTGGTGTCTT...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp GCACGCCAGAGTCTGGCTGGGTGGGTAAATCGGAAAACTGTGACACTGGACGTTTGGACAGACAAATGTTaGGTTAGGTCTTTAATGGAA +
Preference number: 5 (lower is better)
Translates to: ARQSLAGWVNRKTVTLDVWTDKC*VRSLME
Trigger: TTCCATTAAAGACCTAACCAAACATTTGTCTGTCCA...AACGTCCAGTGTCACAGTTTTCCGATTTACCCACCCAGCCAGACTCTGGCGTGC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAATTGCTGAGTTCAACATaGAAGCTCAGTCTCTTAGGC +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKLLSST*KLSLLG
Trigger: GCCTAAGAGACTGAGCTTCAATGTTGAACTCAGCAA...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp TGGCAAACGCACAGCTCAAGAAGCACGAAGCAGGGCCAAGGAACTCTTTTAAAAACTGAAGCTGCAAACTaGACATTCTGTCTGGATCTG +
Preference number: 5 (lower is better)
Translates to: WQTHSSRSTKQGQGTLLKTEAAN*TFCLDL
Trigger: CAGATCCAGACAGAATGTCAAGTTTGCAGCTTCAGT...TTTTAAAAGAGTTCCTTGGCCCTGCTTCGTGCTTCTTGAGCTGTGCGTTTGCCA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp CGTGGAATCAGAATCTGTCTCTGCTTTAATTTTAGGGAGTACAGGTaGACTGGCAGTCCTCCGTTTCTTAGACTCGCAATTTGTGCTACT +
Preference number: 5 (lower is better)
Translates to: RGIRICLCFNFREYR*TGSPPFLRLAICAT
Trigger: AGTAGCACAAATTGCGAGTCTAAGAAACGGAGGACTGCCAGTCCACCTGTACTCCCTAAAATTAAAGCAGAGACAGATTCTGATTCCACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp TGGCTTAAAGCTCGGGTAATGCTGGTTGAGACCAAGTCGAACATCTaGCTCTTTCGTCTTTATTCCGGAAGCCATTATTTTGATGGTCGT +
Preference number: 5 (lower is better)
Translates to: WLKARVMLVETKSNI*LFRLYSGSHYFDGR
Trigger: ACGACCATCAAAATAATGGCTTCCGGAATAAAGACGAAAGAGCCAGATGTTCGACTTGGTCTCAACCAGCATTACCCGAGCTTTAAGCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAAACTGAGCAGTGGCATTaGAGAATGGAGAGGGGCACT +
Preference number: 5 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKTEQWH*RMERGT
Trigger: AGTGCCCCTCTCCATTCTCAAATGCCACTGCTCAGT...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp TTGCACTTGAAAGCGTGGTTGATTGTAGAAATGTGGATGTGCATGTaGCGTTCTAGCCCCTGCTTCGTTGCAAATTTCCTTTCACAATGC +
Preference number: 5 (lower is better)
Translates to: LHLKAWLIVEMWMCM*RSSPCFVANFLSQC
Trigger: GCATTGTGAAAGGAAATTTGCAACGAAGCAGGGGCTAGAACGTCACATGCACATCCACATTTCTACAATCAACCACGCTTTCAAGTGCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 90 bp CTCTACAGTTACTGGAGTGAGCAGACAGTCTATGCCATACAAGTGTaGAGAGTTAGACTCCATCTCAATCACATCACAATCACTAGTGCT +
Preference number: 5 (lower is better)
Translates to: LYSYWSEQTVYAIQV*RVRLHLNHITITSA
Trigger: AGCACTAGTGATTGTGATGTGATTGAGATGGAGTCTAACTCTGCACACTTGTATGGCATAGACTGTCTGCTCACTCCAGTAACTGTAGAG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp GAATCAGGTGGCGTTCGTGAACTCTACGCTGATGTCGTCTCATATTaGTGTGAGTTCCAAATACCTTTTTGCAGTATTTGCATGGGTGAA +
Preference number: 5 (lower is better)
Translates to: ESGGVRELYADVVSY*CEFQIPFCSICMGE
Trigger: TTCACCCATGCAAATACTGCAAAAAGGTATTTGGAACTCACACCAATATGAGACGACATCAGCGTAGAGTTCACGAACGCCACCTGATTC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAACCCTCTGACTTCTGTTaGACACCGCTGGATAAATCC +
Preference number: 5 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKPSDFC*TPLDKS
Trigger: GGATTTATCCAGCGGTGTCAAACAGAAGTCAGAGGG...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp GTCGAACATCTGGCTCTTTCGTCTTTATTCCGGAAGCCATTATTTTaGTGGTCGTGTAAAGCTCTTCAGAGGAGTCATTTAACTCCTCCT +
Preference number: 5 (lower is better)
Translates to: VEHLALSSLFRKPLF*WSCKALQRSHLTPP
Trigger: AGGAGGAGTTAAATGACTCCTCTGAAGAGCTTTACACGACCATCAAAATAATGGCTTCCGGAATAAAGACGAAAGAGCCAGATGTTCGAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 90 bp AGAGCCCTGAGTGCTCTTTATGTTTTGAGTAATCTCTACAGTTACTaGAGTGAGCAGACAGTCTATGCCATACAAGTGTGCAGAGTTAGA +
Preference number: 5 (lower is better)
Translates to: RALSALYVLSNLYSY*SEQTVYAIQVCRVR
Trigger: TCTAACTCTGCACACTTGTATGGCATAGACTGTCTGCTCACTCCAGTAACTGTAGAGATTACTCAAAACATAAAGAGCACTCAGGGCTCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp TCAAACTCGTGGTGTGTGCATAACTCATCTGGGTGGAGATCACGCTaGTGCTGCTGTAAATTGCATAAGAAGGCAAATTCTTTCTTACAT +
Preference number: 5 (lower is better)
Translates to: SNSWCVHNSSGWRSR*CCCKLHKKANSFLH
Trigger: ATGTAAGAAAGAATTTGCCTTCTTATGCAATTTACAGCAGCATCAGCGTGATCTCCACCCAGATGAGTTATGCACACACCACGAGTTTGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS-3UTR CAA 90 bp CCTGATGGATCTATATGCTATTTGCTATTGATTCCCAGAGACAGTGTGAGGAAATGGGTTCTGACGCCTTaGTTTTTATTCTCCTGTGAT +
Preference number: 5 (lower is better)
Translates to: PDGSICYLLLIPRDSVRKWVLTP*FLFSCD
Trigger: ATCACAGGAGAATAAAAACAAAGGCGTCAGAACCCA...TTTCCTCACACTGTCTCTGGGAATCAATAGCAAATAGCATATAGATCCATCAGG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 90 bp AATTCTTTCTTACATACAGAACACACAAAGATATTTCCGACTCCATaGAGCAGAAATCGGTGCTCTGATAGATCGGTCTTACCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: NSFLHTEHTKIFPTP*SRNRCSDRSVLPLK
Trigger: TTTTAAGGGTAAGACCGATCTATCAGAGCACCGATTTCTGCTTCATGGAGTCGGAAATATCTTTGTGTGTTCTGTATGTAAGAAAGAATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp TCCGGCTCTTCGGGGAGCTCCGCTTGCTCCGGGCGCTaGCTCGCTCTTCCTCAATCGCAGCTGCTATCTCGG +
Preference number: 6 (lower is better)
Translates to: SGSSGSSACSGR*LALPQSQLLSR
Trigger: CCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAAGAGCCGGA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS TCA 72 bp CTCCTGCTTTCACTCAGGTCCGCAGCAGCTGCCAGCTaGAGGCTTCGGGTGATTGGGCCCCCGCTCCGCTCT +
Preference number: 6 (lower is better)
Translates to: LLLSLRSAAAAS*RLRVIGPPLRS
Trigger: AGAGCGGAGCGGGGGCCCAATCACCCGAAGCCTTCAGCTGGCAGCTGCTGCGGACCTGAGTGAAAGCAGGAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp TCTTCTTCCCTCTCCGGCTCTTCGGGGAGCTCCGCTTaGTCCGGGCGCTGGCTCGCTCTTCCTCAATCGCAG +
Preference number: 6 (lower is better)
Translates to: SSSLSGSSGSSA*SGRWLALPQSQ
Trigger: CTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAAGAGCCGGAGAGGGAAGAAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp TCTAGCCCTGGGAGCGTGGGGAGGAGGGGTGGCGCCTaGGGAGCCTTCAGAAGTTTCAGTTGGCACACTCCG +
Preference number: 6 (lower is better)
Translates to: SSPGSVGRRGGA*GAFRSFSWHTP
Trigger: CGGAGTGTGCCAACTGAAACTTCTGAAGGCTCCCCAGGCGCCACCCCTCCTCCCCACGCTCCCAGGGCTAGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp CGGGCGCTGGCTCGCTCTTCCTCAATCGCAGCTGCTATCTCGGGGTaGTCTTCCCCATTGTACCAGACCAGGAGCTCCTCGCCAGGCGCG +
Preference number: 6 (lower is better)
Translates to: RALARSSSIAAAISG*SSPLYQTRSSSPGA
Trigger: CGCGCCTGGCGAGGAGCTCCTGGTCTGGTACAATGGGGAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS GCA 72 bp CGAGCTCGGGTCTTGCCCAAGGGTGCCTGCATGCTCTaGATCTTGATCTCCGTATCTGCGGTGCGCCTCCGG +
Preference number: 6 (lower is better)
Translates to: RARVLPKGACML*ILISVSAVRLR
Trigger: CCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCG
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp GAGGGCAGCGAGGCTTGGGCAGGGCCTGTACTCCGAGCTCGGGTCTaGCCCAAGGGTGCCTGCATGCTCTGCATCTTGATCTCCGTATCT +
Preference number: 6 (lower is better)
Translates to: EGSEAWAGPVLRARV*PKGACMLCILISVS
Trigger: AGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGGCCCTGCCCAAGCCTCGCTGCCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp GGGTCTTGCCCAAGGGTGCCTGCATGCTCTGCATCTTaGTCTCCGTATCTGCGGTGCGCCTCCGGGGATTGC +
Preference number: 6 (lower is better)
Translates to: GSCPRVPACSAS*SPYLRCASGDC
Trigger: GCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp CTCGCAGGCAGGAAGAGGGATGGCCACCTGTGGAACTaGATCCTGGCTTACCACCTCTGGCAGAAGGGCTGG +
Preference number: 6 (lower is better)
Translates to: LAGRKRDGHLWN*ILAYHLWQKGW
Trigger: CCAGCCCTTCTGCCAGAGGTGGTAAGCCAGGATGCAGTTCCACAGGTGGCCATCCCTCTTCCTGCCTGCGAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp TTGGACCTTCTGCAGAGCCCCTCATGTTTGCAGAGGTaGAGTCCAGCTCGCTCGCCTTCCGCGCTGCAGCCT +
Preference number: 6 (lower is better)
Translates to: LDLLQSPSCLQR*SPARSPSALQP
Trigger: AGGCTGCAGCGCGGAAGGCGAGCGAGCTGGACTCCACCTCTGCAAACATGAGGGGCTCTGCAGAAGGTCCAA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp ATCATCTGCGTCCCCGTCCTCCTCGGGCTCTGTGCTTaGTACATAGACATTCTGGGAGGGCGGGGCCTGCTC +
Preference number: 6 (lower is better)
Translates to: IICVPVLLGLCA*YIDILGGRGLL
Trigger: GAGCAGGCCCCGCCCTCCCAGAATGTCTATGTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp CATCATCTGCGTCCCCGTCCTCCTCGGGCTCTGTGCTaGGTACATAGACATTCTGGGAGGGCGGGGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HHLRPRPPRALC*VHRHSGRAGPA
Trigger: AGCAGGCCCCGCCCTCCCAGAATGTCTATGTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp CGGGTCTTGCCCAAGGGTGCCTGCATGCTCTGCATCTaGATCTCCGTATCTGCGGTGCGCCTCCGGGGATTG +
Preference number: 6 (lower is better)
Translates to: RVLPKGACMLCI*ISVSAVRLRGL
Trigger: CAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp TCCTGTGATTTCTTCTTCCCTCTCCGGCTCTTCGGGGAGCTCCGCTaGCTCCGGGCGCTGGCTCGCTCTTCCTCAATCGCAGCTGCTATC +
Preference number: 6 (lower is better)
Translates to: SCDFFFPLRLFGELR*LRALARSSSIAAAI
Trigger: GATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGCAAGCGGAGCTCCCCGAAGAGCCGGAGAGGGAAGAAGAAATCACAGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp CTCCGAGCTCGGGTCTTGCCCAAGGGTGCCTGCATGCTCTGCATCTaGATCTCCGTATCTGCGGTGCGCCTCCGGGGATTGCTACTACTG +
Preference number: 6 (lower is better)
Translates to: LRARVLPKGACMLCI*ISVSAVRLRGLLLL
Trigger: CAGTAGTAGCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GCTCCGGGCGCTGGCTCGCTCTTCCTCAATCGCAGCTaGTATCTCGGGGTTGTCTTCCCCATTGTACCAGAC +
Preference number: 6 (lower is better)
Translates to: APGAGSLFLNRS*YLGVVFPIVPD
Trigger: GTCTGGTACAATGGGGAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGCCAGCGCCCGGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS GCA 72 bp ACACATCATCTGCGTCCCCGTCCTCCTCGGGCTCTGTaGTTGGTACATAGACATTCTGGGAGGGCGGGGCCT +
Preference number: 6 (lower is better)
Translates to: THHLRPRPPRAL*LVHRHSGRAGP
Trigger: AGGCCCCGCCCTCCCAGAATGTCTATGTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGATGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp GCAGGAAGAGGGATGGCCACCTGTGGAACTGCATCCTaGCTTACCACCTCTGGCAGAAGGGCTGGCTGCTCA +
Preference number: 6 (lower is better)
Translates to: AGRGMATCGTAS*LTTSGRRAGCS
Trigger: TGAGCAGCCAGCCCTTCTGCCAGAGGTGGTAAGCCAGGATGCAGTTCCACAGGTGGCCATCCCTCTTCCTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp GTCTGTGACTTCTTGTTTCCCATCTGCCCCTGGCTGTaGCTCGCAGGCAGGAAGAGGGATGGCCACCTGTGG +
Preference number: 6 (lower is better)
Translates to: VCDFLFPICPWL*LAGRKRDGHLW
Trigger: CCACAGGTGGCCATCCCTCTTCCTGCCTGCGAGTCACAGCCAGGGGCAGATGGGAAACAAGAAGTCACAGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GCATCCTGGCTTACCACCTCTGGCAGAAGGGCTGGCTaGTCAGGTGCAGAAGCCAAAGGCCTCTCATCCTCT +
Preference number: 6 (lower is better)
Translates to: ASWLTTSGRRAG*SGAEAKGLSSS
Trigger: AGAGGATGAGAGGCCTTTGGCTTCTGCACCTGAGCAGCCAGCCCTTCTGCCAGAGGTGGTAAGCCAGGATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp CCTGTACTCCGAGCTCGGGTCTTGCCCAAGGGTGCCTaGATGCTCTGCATCTTGATCTCCGTATCTGCGGTG +
Preference number: 6 (lower is better)
Translates to: PVLRARVLPKGA*MLCILISVSAV
Trigger: CACCGCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp AGGGCCTGTACTCCGAGCTCGGGTCTTGCCCAAGGGTaGCTGCATGCTCTGCATCTTGATCTCCGTATCTGC +
Preference number: 6 (lower is better)
Translates to: RACTPSSGLAQG*LHALHLDLRIC
Trigger: GCAGATACGGAGATCAAGATGCAGAGCATGCAGGCACCCTTGGGCAAGACCCGAGCTCGGAGTACAGGCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp GCAGGCTCTTCTGGCAAACTCGGCATATGCTCCACATaGGCCTTGCTGGGGTCTGTGAAGTTCTGGGGCCTC +
Preference number: 6 (lower is better)
Translates to: AGSSGKLGICST*ALLGSVKFWGL
Trigger: GAGGCCCCAGAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCCAGAAGAGCCTGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GGCTGTAGCTCAAGTCCTTCAGCTCATGCCTGGCACTaGTGTCCTCTCTCCTGCTTTCACTCAGGTCCGCAG +
Preference number: 6 (lower is better)
Translates to: GCSSSPSAHAWH*CPLSCFHSGPQ
Trigger: CTGCGGACCTGAGTGAAAGCAGGAGAGAGGACAGCAGTGCCAGGCATGAGCTGAAGGACTTGAGCTACAGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp AAGTGTCGGAGGACCAGGGGAAGCAGCAGACATGAGTaGCTCTACAGGAGGAATAGGAGAGGGAGAGGGGGA +
Preference number: 6 (lower is better)
Translates to: KCRRTRGSSRHE*LYRRNRRGRGG
Trigger: TCCCCCTCTCCCTCTCCTATTCCTCCTGTAGAGCCACTCATGTCTGCTGCTTCCCCTGGTCCTCCGACACTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp GTCCGCAGCAGCTGCCAGCTGAAGGCTTCGGGTGATTaGGCCCCCGCTCCGCTCTCTAGATTTTACTATGAA +
Preference number: 6 (lower is better)
Translates to: VRSSCQLKASGD*APAPLSRFYYE
Trigger: TTCATAGTAAAATCTAGAGAGCGGAGCGGGGGCCCAATCACCCGAAGCCTTCAGCTGGCAGCTGCTGCGGAC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp GCTCGCTCTTCCTCAATCGCAGCTGCTATCTCGGGGTaGTCTTCCCCATTGTACCAGACCAGGAGCTCCTCG +
Preference number: 6 (lower is better)
Translates to: ARSSSIAAAISG*SSPLYQTRSSS
Trigger: CGAGGAGCTCCTGGTCTGGTACAATGGGGAAGACAACCCCGAGATAGCAGCTGCGATTGAGGAAGAGCGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS TCA 72 bp GCCAACAACCTCAGGTGGAGACTCAGCAGTGGGGGCTaGGCAACTCGAGTCAGTAGCAAGTTCAGGATCTGG +
Preference number: 6 (lower is better)
Translates to: ANNLRWRLSSGG*ATRVSSKFRIW
Trigger: CCAGATCCTGAACTTGCTACTGACTCGAGTTGCTCAGCCCCCACTGCTGAGTCTCCACCTGAGGTTGTTGGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp CTCCTGAGCAAGCCCAGTTCACATAGCGGAGCCAGTTaGCCTTCTCCGGATCAGTGGCATCAATGCACATCC +
Preference number: 6 (lower is better)
Translates to: LLSKPSSHSGAS*PSPDQWHQCTS
Trigger: GGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGAACTGGGCTTGCTCAGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS GCA 72 bp ACGAAGTTTCTGCTGAATGTCTCTTGGACAGCGCTCTaGCCACCTGCAGCTGGGGCCTCTTCCTTGCGTTTC +
Preference number: 6 (lower is better)
Translates to: TKFLLNVSWTAL*PPAAGASSLRF
Trigger: GAAACGCAAGGAAGAGGCCCCAGCTGCAGGTGGGCAGAGCGCTGTCCAAGAGACATTCAGCAGAAACTTCGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GAAGCTTCCGCAGGCTCTTCTGGCAAACTCGGCATATaGTCCACATGGGCCTTGCTGGGGTCTGTGAAGTTC +
Preference number: 6 (lower is better)
Translates to: EASAGSSGKLGI*STWALLGSVKF
Trigger: GAACTTCACAGACCCCAGCAAGGCCCATGTGGAGCATATGCCGAGTTTGCCAGAAGAGCCTGCGGAAGCTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp GTGGAGTCCAGCTCGCTCGCCTTCCGCGCTGCAGCCTaGGTTCTGACGCCTTTGTTTTTATTCTCCTGTGAT +
Preference number: 6 (lower is better)
Translates to: VESSSLAFRAAA*VLTPLFLFSCD
Trigger: ATCACAGGAGAATAAAAACAAAGGCGTCAGAACCCAGGCTGCAGCGCGGAAGGCGAGCGAGCTGGACTCCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp GTACGTGAACTCCCTGTCACAGTAAGGGCAGATATGTaGGGACGCCTCGGAAGTGTCCCTCAGGTCTGCCTT +
Preference number: 6 (lower is better)
Translates to: VRELPVTVRADM*GRLGSVPQVCL
Trigger: AAGGCAGACCTGAGGGACACTTCCGAGGCGTCCTCACATATCTGCCCTTACTGTGACAGGGAGTTCACGTAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GGAGCCAGTTGCCCTTCTCCGGATCAGTGGCATCAATaGACATCCACCCCAAATTTGGGTAGTACACCTCCC +
Preference number: 6 (lower is better)
Translates to: GASCPSPDQWHQ*TSTPNLGSTPP
Trigger: GGGAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS GCA 72 bp GGGGCCTCAGGGTCCCACTTTCAAACTCGTGGTGTGTaGATAACTCATCTGGGTGGAGATCACGCTGATGCT +
Preference number: 6 (lower is better)
Translates to: GASGSHFQTRGV*ITHLGGDHADA
Trigger: AGCATCAGCGTGATCTCCACCCAGATGAGTTATGCACACACCACGAGTTTGAAAGTGGGACCCTGAGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GGAGCCAGTTGCCCTTCTCCGGATCAGTGGCATCAATaGACATCCACCCCAAATTTGGGTAGTACACCTGGG +
Preference number: 6 (lower is better)
Translates to: GASCPSPDQWHQ*TSTPNLGSTPG
Trigger: CCCAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134791.2
CDS CCA 72 bp GCTCTTCTAGGAGGCCTCCTTTTCGCCGGACACCTTTaGGAATCAGGTGGCGTTCGTGAACTCTACGCTGAT +
Preference number: 6 (lower is better)
Translates to: ALLGGLLFAGHL*ESGGVRELYAD
Trigger: ATCAGCGTAGAGTTCACGAACGCCACCTGATTCCCAAAGGTGTCCGGCGAAAAGGAGGCCTCCTAGAAGAGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp GACTCCTCCTGTTTGAGAGTTATTGCAGGGAGAGATGCTTCCAGGTaGTCCCCAGAGGACACCACAGATGACACTGCTGAGAGAGGGGGT +
Preference number: 6 (lower is better)
Translates to: DSSCLRVIAGRDASR*SPEDTTDDTAERGG
Trigger: ACCCCCTCTCTCAGCAGTGTCATCTGTGGTGTCCTCTGGGGACAACCTGGAAGCATCTCTCCCTGCAATAACTCTCAAACAGGAGGAGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp ATGCTCTGCATCTTGATCTCCGTATCTGCGGTGCGCCTCCGGGGATaGCTACTACTGTTTCTGTCACTGCTGGCAGATGATGTGTGGCCA +
Preference number: 6 (lower is better)
Translates to: MLCILISVSAVRLRG*LLLFLSLLADDVWP
Trigger: TGGCCACACATCATCTGCCAGCAGTGACAGAAACAGTAGTAGCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGATGCAGAGCAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp ACCCTGTTTCGTGGCGCCTTTCATGCCGCCTCCTGTTaGTCTGTGTGCCAAATGGTTTCCCACAGTACTTGC +
Preference number: 6 (lower is better)
Translates to: TLFRGAFHAASC*SVCQMVSHSTC
Trigger: GCAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp AAGGTGATGCGCACACATTGCAGACGAAGTTTCTGCTaGATGTCTCTTGGACAGCGCTCTGCCCACCTGCAG +
Preference number: 6 (lower is better)
Translates to: KVMRTHCRRSFC*MSLGQRSAHLQ
Trigger: CTGCAGGTGGGCAGAGCGCTGTCCAAGAGACATTCAGCAGAAACTTCGTCTGCAATGTGTGCGCATCACCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp AGCCAAAGGCCTCTCATCCTCTTCTTTTGGACCTTCTaGAGAGCCCCTCATGTTTGCAGAGGTGGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: SQRPLILFFWTF*RAPHVCRGGVQ
Trigger: CTGGACTCCACCTCTGCAAACATGAGGGGCTCTGCAGAAGGTCCAAAAGAAGAGGATGAGAGGCCTTTGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp AATGCCATGCTGGGTCTTCTCTTCAACCCTGTTTCGTaGCGCCTTTCATGCCGCCTCCTGTTGATCTGTGTG +
Preference number: 6 (lower is better)
Translates to: NAMLGLLFNPVS*RLSCRLLLICV
Trigger: CACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGTTGAAGAGAAGACCCAGCATGGCATT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CTGTTGGGGAGAGAATCGGAAGAGGAGACTGAGCAGTaGCATTTGAGAATGGAGAGGGGCACTGTTGAGGAG +
Preference number: 6 (lower is better)
Translates to: LLGRESEEETEQ*HLRMERGTVEE
Trigger: CTCCTCAACAGTGCCCCTCTCCATTCTCAAATGCCACTGCTCAGTCTCCTCTTCCGATTCTCTCCCCAACAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp AAGTTCTGGGGCCTCAGGGTCCCACTTTCAAACTCGTaGTGTGTGCATAACTCATCTGGGTGGAGATCACGC +
Preference number: 6 (lower is better)
Translates to: KFWGLRVPLSNS*CVHNSSGWRSR
Trigger: GCGTGATCTCCACCCAGATGAGTTATGCACACACCACGAGTTTGAAAGTGGGACCCTGAGGCCCCAGAACTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp TCTTCCAGCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTCATATTGTaGACCTCACAGTCTGTGACTTCTTGTTTCCCATCTGCCCCTGGC +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSSSFIL*TSQSVTSCFPSAPG
Trigger: GCCAGGGGCAGATGGGAAACAAGAAGTCACAGACTGTGAGGTCAACAATATGAAGGAAGAGGAGGAGGAGGAGGAGGAGGAGCTGGAAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GGTCTTCTCTTCAACCCTGTTTCGTGGCGCCTTTCATaGCGCCTCCTGTTGATCTGTGTGCCAAATGGTTTC +
Preference number: 6 (lower is better)
Translates to: GLLFNPVSWRLS*RLLLICVPNGF
Trigger: GAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGTTGAAGAGAAGACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp TCACATAGCGGAGCCAGTTGCCCTTCTCCGGATCAGTaGCATCAATGCACATCCACCCCAAATTTGGGTAGT +
Preference number: 6 (lower is better)
Translates to: SHSGASCPSPDQ*HQCTSTPNLGS
Trigger: ACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGGAGAAGGGCAACTGGCTCCGCTATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS CCA 72 bp AGGTGCAGAAGCCAAAGGCCTCTCATCCTCTTCTTTTaGACCTTCTGCAGAGCCCCTCATGTTTGCAGAGGT +
Preference number: 6 (lower is better)
Translates to: RCRSQRPLILFF*TFCRAPHVCRG
Trigger: ACCTCTGCAAACATGAGGGGCTCTGCAGAAGGTCCAAAAGAAGAGGATGAGAGGCCTTTGGCTTCTGCACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CATCGTCTGGGTCCTCTGAGGATTGTAATGCCATGCTaGGTCTTCTCTTCAACCCTGTTTCGTGGCGCCTTT +
Preference number: 6 (lower is better)
Translates to: HRLGPLRIVMPC*VFSSTLFRGAF
Trigger: AAAGGCGCCACGAAACAGGGTTGAAGAGAAGACCCAGCATGGCATTACAATCCTCAGAGGACCCAGACGATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp AACCCTGTTTCGTGGCGCCTTTCATGCCGCCTCCTGTaGATCTGTGTGCCAAATGGTTTCCCACAGTACTTG +
Preference number: 6 (lower is better)
Translates to: NPVSWRLSCRLL*ICVPNGFPQYL
Trigger: CAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGGCGCCACGAAACAGGGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp CTGAGATCCAATACAGATTCCCATGGGACTGGAGTCTaGCCTGTGCCCTCTGACTTCTGTTTGACACCGCTG +
Preference number: 6 (lower is better)
Translates to: LRSNTDSHGTGV*PVPSDFCLTPL
Trigger: CAGCGGTGTCAAACAGAAGTCAGAGGGCACAGGCAAGACTCCAGTCCCATGGGAATCTGTATTGGATCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp ATCTTGATCTCCGTATCTGCGGTGCGCCTCCGGGGATaGCTACTACTGTTTCTGTCACTGCTGGCAGATGAT +
Preference number: 6 (lower is better)
Translates to: ILISVSAVRLRG*LLLFLSLLADD
Trigger: ATCATCTGCCAGCAGTGACAGAAACAGTAGTAGCAATCCCCGGAGGCGCACCGCAGATACGGAGATCAAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp CCACACTTTGTGCAGCGGATGGCAGTAGTGAAAGTCTGTGGGATATaGTGGGTGGTGAAGTTTGTGGCTGTTACCCCAATCCCCATAGGG +
Preference number: 6 (lower is better)
Translates to: PHFVQRMAVVKVCGI*WVVKFVAVTPIPIG
Trigger: CCCTATGGGGATTGGGGTAACAGCCACAAACTTCACCACCCACAATATCCCACAGACTTTCACTACTGCCATCCGCTGCACAAAGTGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp CACGCCAAGATGTGCTTATGCAGCTCAGGCATGTTATCAACACTCTaGCCACACTTTGTGCAGCGGATGGCAGTAGTGAAAGTCTGTGGG +
Preference number: 6 (lower is better)
Translates to: HAKMCLCSSGMLSTL*PHFVQRMAVVKVCG
Trigger: CCCACAGACTTTCACTACTGCCATCCGCTGCACAAAGTGTGGCAAGAGTGTTGATAACATGCCTGAGCTGCATAAGCACATCTTGGCGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp CTGCACCTTCACGTGCAGGCTTCGGGATGCTTTGCTTaGGAGCTGAGTAGAATGACTCTTGGCAACAGCTTT +
Preference number: 6 (lower is better)
Translates to: LHLHVQASGCFA*ELSRMTLGNSF
Trigger: AAAGCTGTTGCCAAGAGTCATTCTACTCAGCTCTCAAGCAAAGCATCCCGAAGCCTGCACGTGAAGGTGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GATGTTGCTAGAAATGTCCATGATATACACATCATCTaGGTCCCCGTCCTCCTCGGGCTCTGTGCTTGGTAC +
Preference number: 6 (lower is better)
Translates to: DVARNVHDIHII*VPVLLGLCAWY
Trigger: GTACCAAGCACAGAGCCCGAGGAGGACGGGGACGCAGATGATGTGTATATCATGGACATTTCTAGCAACATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp AGGGCAGTCTTGCTTTGTAGAACAGCTTTGCTCTTCTaGACCTTCACGTGCAGGCTTCGGGATGCTTTGCTT +
Preference number: 6 (lower is better)
Translates to: RAVLLCRTALLF*TFTCRLRDALL
Trigger: AAGCAAAGCATCCCGAAGCCTGCACGTGAAGGTGCAGAAGAGCAAAGCTGTTCTACAAAGCAAGACTGCCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CCCCATAGGGTTTCGATGGTGGTACTGAAATGGAGGTaGCTTAAAGCTCGGGTAATGCTGGTTGAGACCAAG +
Preference number: 6 (lower is better)
Translates to: PHRVSMVVLKWR*LKARVMLVETK
Trigger: CTTGGTCTCAACCAGCATTACCCGAGCTTTAAGCCACCTCCATTTCAGTACCACCATCGAAACCCTATGGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CCCAATCCCCATAGGGTTTCGATGGTGGTACTGAAATaGAGGTGGCTTAAAGCTCGGGTAATGCTGGTTGAG +
Preference number: 6 (lower is better)
Translates to: PNPHRVSMVVLK*RWLKARVMLVE
Trigger: CTCAACCAGCATTACCCGAGCTTTAAGCCACCTCCATTTCAGTACCACCATCGAAACCCTATGGGGATTGGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp TGTTTGAGAGTTATTGCAGGGAGAGATGCTTCCAGGTaGTCCCCAGAGGACACCACAGATGACACTGCTGAG +
Preference number: 6 (lower is better)
Translates to: CLRVIAGRDASR*SPEDTTDDTAE
Trigger: CTCAGCAGTGTCATCTGTGGTGTCCTCTGGGGACAACCTGGAAGCATCTCTCCCTGCAATAACTCTCAAACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp GGAACACGAGGGTGCCGTGGAATCAGAATCTGTCTCTaGTTTAATTTTAGGGAGTACAGGTGGACTGGCAGT +
Preference number: 6 (lower is better)
Translates to: GTRGCRGIRICL*FNFREYRWTGS
Trigger: ACTGCCAGTCCACCTGTACTCCCTAAAATTAAAGCAGAGACAGATTCTGATTCCACGGCACCCTCGTGTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp CTACTCTTTGAAGAAGGGTCCCTGGAACTGAGTTGCTaGTGCAGCCTTGACCTTTCTGCATTGTCTGGTGAT +
Preference number: 6 (lower is better)
Translates to: LLFEEGSLELSC*CSLDLSALSGD
Trigger: ATCACCAGACAATGCAGAAAGGTCAAGGCTGCAGCAGCAACTCAGTTCCAGGGACCCTTCTTCAAAGAGTAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CCTTTCATGCCGCCTCCTGTTGATCTGTGTGCCAAATaGTTTCCCACAGTACTTGCACTTGAAAGCGTGGTT +
Preference number: 6 (lower is better)
Translates to: PFMPPPVDLCAK*FPTVLALESVV
Trigger: AACCACGCTTTCAAGTGCAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCATGAAAGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp AGCTCCTCCTCCTCCTCCTCCTCCTCTTCCTTCATATaGTTGACCTCACAGTCTGTGACTTCTTGTTTCCCA +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSSFI*LTSQSVTSCFP
Trigger: TGGGAAACAAGAAGTCACAGACTGTGAGGTCAACAATATGAAGGAAGAGGAGGAGGAGGAGGAGGAGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp AACCGGTCTGTTCTTTTCTTGCTGGCCAGGGCAGTCTaGCTTTGTAGAACAGCTTTGCTCTTCTGCACCTTC +
Preference number: 6 (lower is better)
Translates to: NRSVLFLLARAV*LCRTALLFCTF
Trigger: GAAGGTGCAGAAGAGCAAAGCTGTTCTACAAAGCAAGACTGCCCTGGCCAGCAAGAAAAGAACAGACCGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp AAACTCCACGCTGGTGAGTCACTACGACTTTCTAACTTCGGTTTCTaGGAAGTCAGAGCTGTGTCTGTCCATGCTGCTTTCCCATCACTC +
Preference number: 6 (lower is better)
Translates to: KLHAGESLRLSNFGF*EVRAVSVHAAFPSL
Trigger: GAGTGATGGGAAAGCAGCATGGACAGACACAGCTCTGACTTCCAAGAAACCGAAGTTAGAAAGTCGTAGTGACTCACCAGCGTGGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp TTATGCACACTGAGATCCAATACAGATTCCCATGGGACTGGAGTCTaGCCTGTGCCCTCTGACTTCTGTTTGACACCGCTGGATAAATCC +
Preference number: 6 (lower is better)
Translates to: LCTLRSNTDSHGTGV*PVPSDFCLTPLDKS
Trigger: GGATTTATCCAGCGGTGTCAAACAGAAGTCAGAGGGCACAGGCAAGACTCCAGTCCCATGGGAATCTGTATTGGATCTCAGTGTGCATAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp TTTACTATGAACCGGTCTGTTCTTTTCTTGCTGGCCAGGGCAGTCTaGCTTTGTAGAACAGCTTTGCTCTTCTGCACCTTCACGTGCAGG +
Preference number: 6 (lower is better)
Translates to: FTMNRSVLFLLARAV*LCRTALLFCTFTCR
Trigger: CCTGCACGTGAAGGTGCAGAAGAGCAAAGCTGTTCTACAAAGCAAGACTGCCCTGGCCAGCAAGAAAAGAACAGACCGGTTCATAGTAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp TTGTCACTTGCAGATGCACACGCCAAGATGTGCTTATaGAGCTCAGGCATGTTATCAACACTCTTGCCACAC +
Preference number: 6 (lower is better)
Translates to: LSLADAHAKMCL*SSGMLSTLLPH
Trigger: GTGTGGCAAGAGTGTTGATAACATGCCTGAGCTGCATAAGCACATCTTGGCGTGTGCATCTGCAAGTGACAA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp TTGCTGAGTTCAACATTGAAGCTCAGTCTCTTAGGCTaGCCCATCCGTCTGAAGGCATTTTTCCCAGAGTTG +
Preference number: 6 (lower is better)
Translates to: LLSSTLKLSLLG*PIRLKAFFPEL
Trigger: CAACTCTGGGAAAAATGCCTTCAGACGGATGGGGCAGCCTAAGAGACTGAGCTTCAATGTTGAACTCAGCAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CTGGTGAGTCACTACGACTTTCTAACTTCGGTTTCTTaGAAGTCAGAGCTGTGTCTGTCCATGCTGCTTTCC +
Preference number: 6 (lower is better)
Translates to: LVSHYDFLTSVS*KSELCLSMLLS
Trigger: GGAAAGCAGCATGGACAGACACAGCTCTGACTTCCAAGAAACCGAAGTTAGAAAGTCGTAGTGACTCACCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp ACACTTTGTGCAGCGGATGGCAGTAGTGAAAGTCTGTaGGATATTGTGGGTGGTGAAGTTTGTGGCTGTTAC +
Preference number: 6 (lower is better)
Translates to: TLCAADGSSESL*DIVGGEVCGCY
Trigger: GTAACAGCCACAAACTTCACCACCCACAATATCCCACAGACTTTCACTACTGCCATCCGCTGCACAAAGTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CGGATCAGTGGCATCAATGCACATCCACCCCAAATTTaGGTAGTACACCTGGGATCTCTTCTTCTTATCACC +
Preference number: 6 (lower is better)
Translates to: RISGINAHPPQI*VVHLGSLLLIT
Trigger: GGTGATAAGAAGAAGAGATCCCAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000134791.2
CDS CAA 72 bp TCCTCCTCCTCCTCCTCCTCCTCTTCCTTCATATTGTaGACCTCACAGTCTGTGACTTCTTGTTTCCCATCT +
Preference number: 6 (lower is better)
Translates to: SSSSSSSSSFIL*TSQSVTSCFPS
Trigger: AGATGGGAAACAAGAAGTCACAGACTGTGAGGTCAACAATATGAAGGAAGAGGAGGAGGAGGAGGAGGAGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp GGACTCGACTCATCTTTAGAAGTAACATTTTCCCCCTaGCCATCGTCTGGGTCCTCTGAGGATTGTAATGCC +
Preference number: 6 (lower is better)
Translates to: GLDSSLEVTFSP*PSSGSSEDCNA
Trigger: GGCATTACAATCCTCAGAGGACCCAGACGATGGCAAGGGGGAAAATGTTACTTCTAAAGATGAGTCGAGTCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp GCTGGTGAGTCACTACGACTTTCTAACTTCGGTTTCTaGGAAGTCAGAGCTGTGTCTGTCCATGCTGCTTTC +
Preference number: 6 (lower is better)
Translates to: AGESLRLSNFGF*EVRAVSVHAAF
Trigger: GAAAGCAGCATGGACAGACACAGCTCTGACTTCCAAGAAACCGAAGTTAGAAAGTCGTAGTGACTCACCAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp TGCCGCCTCCTGTTGATCTGTGTGCCAAATGGTTTCCCACAGTACTaGCACTTGAAAGCGTGGTTGATTGTAGAAATGTGGATGTGCATG +
Preference number: 6 (lower is better)
Translates to: CRLLLICVPNGFPQY*HLKAWLIVEMWMCM
Trigger: CATGCACATCCACATTTCTACAATCAACCACGCTTTCAAGTGCAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAGGAGGCGGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp CTCTTCTTGTCACTTGCAGATGCACACGCCAAGATGTaGTTATGCAGCTCAGGCATGTTATCAACACTCTTG +
Preference number: 6 (lower is better)
Translates to: LFLSLADAHAKM*LCSSGMLSTLL
Trigger: CAAGAGTGTTGATAACATGCCTGAGCTGCATAAGCACATCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS GCA 72 bp TTTCTTAGGAGTGTACCTCTTCTTGTCACTTGCAGATaGACACGCCAAGATGTGCTTATGCAGCTCAGGCAT +
Preference number: 6 (lower is better)
Translates to: FLRSVPLLVTCR*TRQDVLMQLRH
Trigger: ATGCCTGAGCTGCATAAGCACATCTTGGCGTGTGCATCTGCAAGTGACAAGAAGAGGTACACTCCTAAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp CCGGATCAGTGGCATCAATGCACATCCACCCCAAATTaGGGTAGTACACCTCCCACATGTATACATTATTCC +
Preference number: 6 (lower is better)
Translates to: PDQWHQCTSTPN*GSTPPTCIHYS
Trigger: GGAATAATGTATACATGTGGGAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS CAA 90 bp TGTTTGGTTAGGTCTTTAATGGAAAGAAAAGGTGATGCGCACACATaGCAGACGAAGTTTCTGCTGAATGTCTCTTGGACAGCGCTCTGC +
Preference number: 6 (lower is better)
Translates to: CLVRSLMERKGDAHT*QTKFLLNVSWTALC
Trigger: GCAGAGCGCTGTCCAAGAGACATTCAGCAGAAACTTCGTCTGCAATGTGTGCGCATCACCTTTTCTTTCCATTAAAGACCTAACCAAACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp CCTTGCCTTCAGAATCACAAGGCTTTTTATGCACACTaGGATCCAATACAGATTCCCATGGGACTGGAGTCT +
Preference number: 6 (lower is better)
Translates to: PCLQNHKAFYAH*DPIQIPMGLES
Trigger: AGACTCCAGTCCCATGGGAATCTGTATTGGATCTCAGTGTGCATAAAAAGCCTTGTGATTCTGAAGGCAAGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp CGGATCAGTGGCATCAATGCACATCCACCCCAAATTTaGGTAGTACACCTCCCACATGTATACATTATTCCT +
Preference number: 6 (lower is better)
Translates to: RISGINAHPPQI*VVHLPHVYIIP
Trigger: AGGAATAATGTATACATGTGGGAGGTGTACTACCCAAATTTGGGGTGGATGTGCATTGATGCCACTGATCCG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000105778.8
ENSMUST00000154280.8
CDS CCA 72 bp GCTCGGGTAATGCTGGTTGAGACCAAGTCGAACATCTaGCTCTTTCGTCTTTATTCCGGAAGCCATTATTTT +
Preference number: 6 (lower is better)
Translates to: ARVMLVETKSNI*LFRLYSGSHYF
Trigger: AAAATAATGGCTTCCGGAATAAAGACGAAAGAGCCAGATGTTCGACTTGGTCTCAACCAGCATTACCCGAGC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp AAAATTGGTTTAGTGGCCCAGACACCAATCCGAGTCTaGTCGACCGCAGATGGTAAAAGTCTTACTTCCTCT +
Preference number: 6 (lower is better)
Translates to: KIGLVAQTPIRV*STADGKSLTSS
Trigger: AGAGGAAGTAAGACTTTTACCATCTGCGGTCGACAAGACTCGGATTGGTGTCTGGGCCACTAAACCAATTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000105778.8
ENSMUST00000134791.2
ENSMUST00000154280.8
CDS CAA 72 bp TGTGGATGTGCATGTGACGTTCTAGCCCCTGCTTCGTaGCAAATTTCCTTTCACAATGCTGACATGGAAACA +
Preference number: 6 (lower is better)
Translates to: CGCACDVLAPAS*QISFHNADMET
Trigger: TGTTTCCATGTCAGCATTGTGAAAGGAAATTTGCAACGAAGCAGGGGCTAGAACGTCACATGCACATCCACA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp TTGAGCTTATTTGGAGACATTTTGCTGAGTTCAACATaGAAGCTCAGTCTCTTAGGCTGCCCCATCCGTCTG +
Preference number: 6 (lower is better)
Translates to: LSLFGDILLSST*KLSLLGCPIRL
Trigger: CAGACGGATGGGGCAGCCTAAGAGACTGAGCTTCAATGTTGAACTCAGCAAAATGTCTCCAAATAAGCTCAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp GCATTTAGCTTGAGCTTATTTGGAGACATTTTGCTGAGTTCAACATaGAAGCTCAGTCTCTTAGGCTGCCCCATCCGTCTGAAGGCATTT +
Preference number: 6 (lower is better)
Translates to: AFSLSLFGDILLSST*KLSLLGCPIRLKAF
Trigger: AAATGCCTTCAGACGGATGGGGCAGCCTAAGAGACTGAGCTTCAATGTTGAACTCAGCAAAATGTCTCCAAATAAGCTCAAGCTAAATGC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp AAAGCGTGGTTGATTGTAGAAATGTGGATGTGCATGTaGCGTTCTAGCCCCTGCTTCGTTGCAAATTTCCTT +
Preference number: 6 (lower is better)
Translates to: KAWLIVEMWMCM*RSSPCFVANFL
Trigger: AAGGAAATTTGCAACGAAGCAGGGGCTAGAACGTCACATGCACATCCACATTTCTACAATCAACCACGCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp GAGGAGTCAGTTTGTCCTGGGTCTGAAGAAGCTGCTTaGGCTTTGAAGACAAATAGACACCCTTCTCTTTAT +
Preference number: 6 (lower is better)
Translates to: EESVCPGSEEAA*ALKTNRHPSLY
Trigger: ATAAAGAGAAGGGTGTCTATTTGTCTTCAAAGCTCAAGCAGCTTCTTCAGACCCAGGACAAACTGACTCCTC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp TGGTGTGTGCATAACTCATCTGGGTGGAGATCACGCTaGTGCTGCTGTAAATTGCATAAGAAGGCAAATTCT +
Preference number: 6 (lower is better)
Translates to: WCVHNSSGWRSR*CCCKLHKKANS
Trigger: AGAATTTGCCTTCTTATGCAATTTACAGCAGCATCAGCGTGATCTCCACCCAGATGAGTTATGCACACACCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp GGCGTTCGTGAACTCTACGCTGATGTCGTCTCATATTaGTGTGAGTTCCAAATACCTTTTTGCAGTATTTGC +
Preference number: 6 (lower is better)
Translates to: GVRELYADVVSY*CEFQIPFCSIC
Trigger: GCAAATACTGCAAAAAGGTATTTGGAACTCACACCAATATGAGACGACATCAGCGTAGAGTTCACGAACGCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp AGAATCTGTCTCTGCTTTAATTTTAGGGAGTACAGGTaGACTGGCAGTCCTCCGTTTCTTAGACTCGCAATT +
Preference number: 6 (lower is better)
Translates to: RICLCFNFREYR*TGSPPFLRLAI
Trigger: AATTGCGAGTCTAAGAAACGGAGGACTGCCAGTCCACCTGTACTCCCTAAAATTAAAGCAGAGACAGATTCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp ATCTGTGTGCCAAATGGTTTCCCACAGTACTTGCACTaGAAAGCGTGGTTGATTGTAGAAATGTGGATGTGC +
Preference number: 6 (lower is better)
Translates to: ICVPNGFPQYLH*KAWLIVEMWMC
Trigger: GCACATCCACATTTCTACAATCAACCACGCTTTCAAGTGCAAGTACTGTGGGAAACCATTTGGCACACAGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp CTGTTGATCTGTGTGCCAAATGGTTTCCCACAGTACTaGCACTTGAAAGCGTGGTTGATTGTAGAAATGTGG +
Preference number: 6 (lower is better)
Translates to: LLICVPNGFPQY*HLKAWLIVEMW
Trigger: CCACATTTCTACAATCAACCACGCTTTCAAGTGCAAGTACTGTGGGAAACCATTTGGCACACAGATCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp TTCTTCTTTGCAGCCGGCTGTGCCAAATGGTTCTCTTaGAATTCCTTGCCTTCAGAATCACAAGGCTTTTTA +
Preference number: 6 (lower is better)
Translates to: FFFAAGCAKWFS*NSLPSESQGFL
Trigger: TAAAAAGCCTTGTGATTCTGAAGGCAAGGAATTCAAAGAGAACCATTTGGCACAGCCGGCTGCAAAGAAGAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp AGGTCTTTAATGGAAAGAAAAGGTGATGCGCACACATaGCAGACGAAGTTTCTGCTGAATGTCTCTTGGACA +
Preference number: 6 (lower is better)
Translates to: RSLMERKGDAHT*QTKFLLNVSWT
Trigger: TGTCCAAGAGACATTCAGCAGAAACTTCGTCTGCAATGTGTGCGCATCACCTTTTCTTTCCATTAAAGACCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp GATAGATCGGTCTTACCCTTAAAAAGCTGCACACAAAACTCACATTaGAAGGGCCATTCTTCAGCATGGACAGACAAATGTTTGGTTAGG +
Preference number: 6 (lower is better)
Translates to: DRSVLPLKSCTQNSH*KGHSSAWTDKCLVR
Trigger: CCTAACCAAACATTTGTCTGTCCATGCTGAAGAATGGCCCTTCAAATGTGAGTTTTGTGTGCAGCTTTTTAAGGGTAAGACCGATCTATC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 90 bp ATTCTTACGGGACTAGAATTCCTCAAGGATGAAGAGCTTGCTTTTTaGGACTTGACTGAAGCTGCAAACTTGACATTCTGTCTGGATCTG +
Preference number: 6 (lower is better)
Translates to: ILTGLEFLKDEELAF*DLTEAANLTFCLDL
Trigger: CAGATCCAGACAGAATGTCAAGTTTGCAGCTTCAGTCAAGTCCAAAAAAGCAAGCTCTTCATCCTTGAGGAATTCTAGTCCCGTAAGAAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp CTGGCTCTTTCGTCTTTATTCCGGAAGCCATTATTTTaGTGGTCGTGTAAAGCTCTTCAGAGGAGTCATTTA +
Preference number: 6 (lower is better)
Translates to: LALSSLFRKPLF*WSCKALQRSHL
Trigger: TAAATGACTCCTCTGAAGAGCTTTACACGACCATCAAAATAATGGCTTCCGGAATAAAGACGAAAGAGCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CCA 72 bp AGTGCTCTTTATGTTTTGAGTAATCTCTACAGTTACTaGAGTGAGCAGACAGTCTATGCCATACAAGTGTGC +
Preference number: 6 (lower is better)
Translates to: SALYVLSNLYSY*SEQTVYAIQVC
Trigger: GCACACTTGTATGGCATAGACTGTCTGCTCACTCCAGTAACTGTAGAGATTACTCAAAACATAAAGAGCACT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp GTCTTACCCTTAAAAAGCTGCACACAAAACTCACATTaGAAGGGCCATTCTTCAGCATGGACAGACAAATGT +
Preference number: 6 (lower is better)
Translates to: VLPLKSCTQNSH*KGHSSAWTDKC
Trigger: ACATTTGTCTGTCCATGCTGAAGAATGGCCCTTCAAATGTGAGTTTTGTGTGCAGCTTTTTAAGGGTAAGAC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp TTACATACAGAACACACAAAGATATTTCCGACTCCATaGAGCAGAAATCGGTGCTCTGATAGATCGGTCTTA +
Preference number: 6 (lower is better)
Translates to: LHTEHTKIFPTP*SRNRCSDRSVL
Trigger: TAAGACCGATCTATCAGAGCACCGATTTCTGCTTCATGGAGTCGGAAATATCTTTGTGTGTTCTGTATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp GTGCTTTCTGTAGGTAAGCTAACACCATTATATTCATaGAGAAGAACCTTTTGTAGCATGCAGGTGGTTGGT +
Preference number: 6 (lower is better)
Translates to: VLSVGKLTPLYS*RRTFCSMQVVG
Trigger: ACCAACCACCTGCATGCTACAAAAGGTTCTTCTCAATGAATATAATGGTGTTAGCTTACCTACAGAAAGCAC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS TCA 72 bp TTCTCTGAGTTCAATATCAAACAGTCTTGCCCAAGTTaGGGTGGACTCGACTCATCTTTAGAAGTAACATTT +
Preference number: 6 (lower is better)
Translates to: FSEFNIKQSCPS*GGLDSSLEVTF
Trigger: AAATGTTACTTCTAAAGATGAGTCGAGTCCACCTCAACTTGGGCAAGACTGTTTGATATTGAACTCAGAGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8
CDS CAA 72 bp TTCAATGCATTTAGCTTGAGCTTATTTGGAGACATTTaGCTGAGTTCAACATTGAAGCTCAGTCTCTTAGGC +
Preference number: 6 (lower is better)
Translates to: FNAFSLSLFGDI*LSSTLKLSLLG
Trigger: GCCTAAGAGACTGAGCTTCAATGTTGAACTCAGCAAAATGTCTCCAAATAAGCTCAAGCTAAATGCATTGAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000105778.8