RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for PRDM15 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000014039

Ensembl transcript IDs: ENSMUST00000095849.10, ENSMUST00000119200.8, ENSMUST00000121584.8, ENSMUST00000135505.3, ENSMUST00000142295.8

Found 805 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp GTTCTCCCGGTGGATGACCATGTGGGCATGGTAGGTGGCCTTGAGTaGGAAGCGTCGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTT +
Preference number: 1 (lower is better)
Translates to: VLPVDDHVGMVGGLE*EASVADAAAVALLL
Trigger: AAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACTCAAGGCCACCTACCATGCCCACATGGTCATCCACCGGGAGAAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp CTTCTGCCAGTTCTTCCTGCTCCAGGCCCAGCGCAGGCTGGACAATaGCGATGGAAGATGCATCGATGGTGGTGGTCTCGGGGAGGTGGT +
Preference number: 1 (lower is better)
Translates to: LLPVLPAPGPAQAGQ*RWKMHRWWWSRGGG
Trigger: ACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGGAAGAACTGGCAGAAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GGCCCAGCGCAGGCTGGACAATGCCGATGGAAGATGCATCGATGGTaGTGGTCTCGGGGAGGTGGTCCAGATCGTCAATCCGAACAGCGA +
Preference number: 1 (lower is better)
Translates to: GPAQAGQCRWKMHRW*WSRGGGPDRQSEQR
Trigger: TCGCTGTTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp CCAGGCCCAGCGCAGGCTGGACAATGCCGATGGAAGATGCATCGATaGTGGTGGTCTCGGGGAGGTGGTCCAGATCGTCAATCCGAACAG +
Preference number: 1 (lower is better)
Translates to: PGPAQAGQCRWKMHR*WWSRGGGPDRQSEQ
Trigger: CTGTTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp CCAGTTCTTCCTGCTCCAGGCCCAGCGCAGGCTGGACAATGCCGATaGAAGATGCATCGATGGTGGTGGTCTCGGGGAGGTGGTCCAGAT +
Preference number: 1 (lower is better)
Translates to: PVLPAPGPAQAGQCR*KMHRWWWSRGGGPD
Trigger: ATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGGAAGAACTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp TGGCGGCTGCAGCACATCTGTCTGGGGCACTGCTCGCCAGGTGAGTaGGTGCTGCTCACTGAGTTGGTTCCCCAAGGGTGTGATGGAGTT +
Preference number: 1 (lower is better)
Translates to: WRLQHICLGHCSPGE*VLLTELVPQGCDGV
Trigger: AACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCAGCCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp GGTGGTCCAGATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTTaGGTCGCATATGTCTGCTCATGGAGGCCCGGGTTGACACTTTGG +
Preference number: 1 (lower is better)
Translates to: GGPDRQSEQRGPRGA*VAYVCSWRPGLTLW
Trigger: CCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCTGGACCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp TTCCTGCTCCAGGCCCAGCGCAGGCTGGACAATGCCGATGGAAGATaGATCGATGGTGGTGGTCTCGGGGAGGTGGTCCAGATCGTCAAT +
Preference number: 1 (lower is better)
Translates to: FLLQAQRRLDNADGR*IDGGGLGEVVQIVN
Trigger: ATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp GGCTGCAGCACATCTGTCTGGGGCACTGCTCGCCAGGTGAGTGGGTaGTGCTCACTGAGTTGGTTCCCCAAGGGTGTGATGGAGTTTACC +
Preference number: 1 (lower is better)
Translates to: GCSTSVWGTARQVSG*CSLSWFPKGVMEFT
Trigger: GGTAAACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCAGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp CCAGCGCAGGCTGGACAATGCCGATGGAAGATGCATCGATGGTGGTaGTCTCGGGGAGGTGGTCCAGATCGTCAATCCGAACAGCGAGGA +
Preference number: 1 (lower is better)
Translates to: PAQAGQCRWKMHRWW*SRGGGPDRQSEQRG
Trigger: TCCTCGCTGTTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp CAGATGCTGCAGCCGTGGCCCTTCTCCTTGTGCACCTCCATGATGTaGTTCAGGTATTCCTTCCCACGGCCGAAAGTGAGCTGGCACCTC +
Preference number: 1 (lower is better)
Translates to: QMLQPWPFSLCTSMM*FRYSFPRPKVSWHL
Trigger: GAGGTGCCAGCTCACTTTCGGCCGTGGGAAGGAATACCTGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp CAATCCGAACAGCGAGGACCTCGGGGTGCTTGCGTCGCATATGTCTaGTCATGGAGGCCCGGGTTGACACTTTGGTGCCACATAGTTGGC +
Preference number: 1 (lower is better)
Translates to: QSEQRGPRGACVAYV*SWRPGLTLWCHIVG
Trigger: GCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp ACAATGCCGATGGAAGATGCATCGATGGTGGTGGTCTCGGGGAGGTaGTCCAGATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTTG +
Preference number: 1 (lower is better)
Translates to: TMPMEDASMVVVSGR*SRSSIRTARTSGCL
Trigger: CAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp TGCAGCACATCTGTCTGGGGCACTGCTCGCCAGGTGAGTGGGTGCTaGTCACTGAGTTGGTTCCCCAAGGGTGTGATGGAGTTTACCAGT +
Preference number: 1 (lower is better)
Translates to: CSTSVWGTARQVSGC*SLSWFPKGVMEFTS
Trigger: ACTGGTAAACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GAACAGCGAGGACCTCGGGGTGCTTGCGTCGCATATGTCTGCTCATaGAGGCCCGGGTTGACACTTTGGTGCCACATAGTTGGCAACTCT +
Preference number: 1 (lower is better)
Translates to: EQRGPRGACVAYVCS*RPGLTLWCHIVGNS
Trigger: AGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GTCTGGGGCACTGCTCGCCAGGTGAGTGGGTGCTGCTCACTGAGTTaGTTCCCCAAGGGTGTGATGGAGTTTACCAGTGTGGTAAGGTTG +
Preference number: 1 (lower is better)
Translates to: VWGTARQVSGCCSLS*FPKGVMEFTSVVRL
Trigger: CAACCTTACCACACTGGTAAACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GTGACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATaGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTG +
Preference number: 1 (lower is better)
Translates to: VTLWSGQAATPWENT*QKLLLAKAIPPAKL
Trigger: CAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGTCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 90 bp CTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTaGACTATGGACCCTATGATGGCAGCCTGGCCTGTTACCATGGGG +
Preference number: 1 (lower is better)
Translates to: LDQTLSSPCLFMSLC*TMDPMMAAWPVTMG
Trigger: CCCCATGGTAACAGGCCAGGCTGCCATCATAGGGTCCATAGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTaGTGGACTATGGACCCTATGATGGCAGCCTGGCCTGTTACCATG +
Preference number: 1 (lower is better)
Translates to: ELDQTLSSPCLFMSL*WTMDPMMAAWPVTM
Trigger: CATGGTAACAGGCCAGGCTGCCATCATAGGGTCCATAGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp AGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTTaGTCCGACAGGAGAACACCTTGCCACACACTGGGCATCCAGAAG +
Preference number: 1 (lower is better)
Translates to: RCTSCHRGSAGACSC*SDRRTPCHTLGIQK
Trigger: CTTCTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp CCACAGATCTCGCAGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTaGTTGTTCATGTTGCTCCGACAGGAGAACACCTTGCCACACACT +
Preference number: 1 (lower is better)
Translates to: PQISQVYFLSPWVSR*LFMLLRQENTLPHT
Trigger: AGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCTGTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp ATACCTTTCCCACACTCGGCGCACAGGTACTCCCGGATGTTGTCATaGACACGCATGTGCTCTTTCAGCATGTCCTTCCTGGCAAAGGAC +
Preference number: 1 (lower is better)
Translates to: IPFPHSAHRYSRMLS*TRMCSFSMSFLAKD
Trigger: GTCCTTTGCCAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCATGACAACATCCGGGAGTACCTGTGCGCCGAGTGTGGGAAAGGTAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp GTGGCTTCTGGCTGTGGGTGGATCTGGACATCATTTTGCCGGTTGTaGAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGG +
Preference number: 1 (lower is better)
Translates to: VASGCGWIWTSFCRL*NMAEPLTVSKVTVR
Trigger: CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGAAGCCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp CATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTaGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACA +
Preference number: 1 (lower is better)
Translates to: HRDSSVRAHFAHNCV*PHTRHLCTTGQGLT
Trigger: TGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 90 bp GCTTGCGTCGCATATGTCTGCTCATGGAGGCCCGGGTTGACACTTTaGTGCCACATAGTTGGCAACTCTGTGCTTCCACCTTGTCATGAG +
Preference number: 1 (lower is better)
Translates to: ACVAYVCSWRPGLTL*CHIVGNSVLPPCHE
Trigger: CTCATGACAAGGTGGAAGCACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GATGGAGCAGTCACATTGGGGTCCCCTAGGGTCACCACCACCTGTTaGATACTCTGTACAGCAGAATTTGTCTCGTCACCCACACTGCCT +
Preference number: 1 (lower is better)
Translates to: DGAVTLGSPRVTTTC*ILCTAEFVSSPTLP
Trigger: AGGCAGTGTGGGTGACGAGACAAATTCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACCCTAGGGGACCCCAATGTGACTGCTCCATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 90 bp GGCCTCAGGCCACAGCTCTGTGACGTAAGAACTGAGACTTCAGAATaGCTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCG +
Preference number: 1 (lower is better)
Translates to: GLRPQLCDVRTETSE*LLPACESRSKEKPA
Trigger: CGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTCTTACGTCACAGAGCTGTGGCCTGAGGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp CAGAAGCTCCAGCCTCATCCTCAAAGCTCGCTCTCTGGAAGGAGGTaGCGAGTAGCAGCATCATGTCTGACATCACACTGTAACTTCCCT +
Preference number: 1 (lower is better)
Translates to: QKLQPHPQSSLSGRR*RVAASCLTSHCNFP
Trigger: AGGGAAGTTACAGTGTGATGTCAGACATGATGCTGCTACTCGGCACCTCCTTCCAGAGAGCGAGCTTTGAGGATGAGGCTGGAGCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp ACACCTCAAGACCTCAGAACCCCACTGCTGCAGCTCAGCCTATTCTaGAGCCACAGATCAGTAGCTGTACATCTGCTGCTGCTCATTCTG +
Preference number: 1 (lower is better)
Translates to: TPQDLRTPLLQLSLF*SHRSVAVHLLLLIL
Trigger: CAGAATGAGCAGCAGCAGATGTACAGCTACTGATCTGTGGCTGCAGAATAGGCTGAGCTGCAGCAGTGGGGTTCTGAGGTCTTGAGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp GGATGTTGTCATGCACACGCATGTGCTCTTTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACTGCTCACAGGCGTGGCTTTTCACAC +
Preference number: 1 (lower is better)
Translates to: GCCHAHACALSACPS*QRTSHTAHRRGFSH
Trigger: GTGTGAAAAGCCACGCCTGTGAGCAGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCATGACAACATCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 90 bp TGGCTCAGAGTCTGCGCTCTCATCAGAGTTGTCATCATTCTCCTCTaGGGAGATCCCAATTTTGCCAATGAACTCCTCCCGCTGGTGGTC +
Preference number: 1 (lower is better)
Translates to: WLRVCALIRVVIILL*GDPNFANELLPLVV
Trigger: GACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTCAGAGGAGAATGATGACAACTCTGATGAGAGCGCAGACTCTGAGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp ATCTGTGTAACAGAAGCTCCAGCCTCATCCTCAAAGCTCGCTCTCTaGAAGGAGGTGCCGAGTAGCAGCATCATGTCTGACATCACACTG +
Preference number: 1 (lower is better)
Translates to: ICVTEAPASSSKLAL*KEVPSSSIMSDITL
Trigger: CAGTGTGATGTCAGACATGATGCTGCTACTCGGCACCTCCTTCCAGAGAGCGAGCTTTGAGGATGAGGCTGGAGCTTCTGTTACACAGAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 90 bp TCCTCTGAGGAGATCCCAATTTTGCCAATGAACTCCTCCCGCTGGTaGTCATCCATTAGCGCGATGTCCTTGAAGTGGACATGGATGTGG +
Preference number: 1 (lower is better)
Translates to: SSEEIPILPMNSSRW*SSISAMSLKWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGCTAATGGATGACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTCAGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp TCCTTGCACTCATACTCCTTGATGCCTTTGTGCAGCTTCATATGGTaGCGCAGTGCATGCTTGGTCTTCATACCTTTCCCACACTCGGCG +
Preference number: 1 (lower is better)
Translates to: SLHSYSLMPLCSFIW*RSACLVFIPFPHSA
Trigger: CGCCGAGTGTGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATATGAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAAGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 90 bp GGGTTGGTAAGATGTCCAACAGCCACTGGCTGTAAATTGGTAAACTaGGTTCCAGCTGCAGTGGTGATGGGGGTCACGGTGATGTTGGTT +
Preference number: 1 (lower is better)
Translates to: GLVRCPTATGCKLVN*VPAAVVMGVTVMLV
Trigger: AACCAACATCACCGTGACCCCCATCACCACTGCAGCTGGAACTCAGTTTACCAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp ACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATaGTCCATCTGTGTAACAGAAGCTCCAGCCTCATCCTCAAAGCTC +
Preference number: 1 (lower is better)
Translates to: THRPADLSSSAISSL*SICVTEAPASSSKL
Trigger: GAGCTTTGAGGATGAGGCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 90 bp AGGAGAGGGCATCTGGTACAGACCCTTTTCCTGAGAACTTATCACTaGCTAACACCATCCCAGAGGGTGGAATCCTGTGCTGCAACTATG +
Preference number: 1 (lower is better)
Translates to: RRGHLVQTLFLRTYH*LTPSQRVESCAATM
Trigger: CATAGTTGCAGCACAGGATTCCACCCTCTGGGATGGTGTTAGCCAGTGATAAGTTCTCAGGAAAAGGGTCTGTACCAGATGCCCTCTCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR GCA 90 bp ACCTGGAGTGTAGAGGTGCCTTTGTTTTGCTATCCAGTTGCTATCTaGAGGGGAGCTGTAACTATGGTGAGACAACCTGCTTGCTTCAGC +
Preference number: 1 (lower is better)
Translates to: TWSVEVPLFCYPVAI*RGAVTMVRQPACFS
Trigger: GCTGAAGCAAGCAGGTTGTCTCACCATAGTTACAGCTCCCCTGCAGATAGCAACTGGATAGCAAAACAAAGGCACCTCTACACTCCAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 90 bp CATTCCTTGCACTCATACTCCTTGATGCCTTTGTGCAGCTTCATATaGTGGCGCAGTGCATGCTTGGTCTTCATACCTTTCCCACACTCG +
Preference number: 1 (lower is better)
Translates to: HSLHSYSLMPLCSFI*WRSACLVFIPFPHS
Trigger: CGAGTGTGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATATGAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAAGGAATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 90 bp GGATCTGGACATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTaGCAGTATCAAAGGTCACAGTCAGGATGGAGTTATCTAGCTGTA +
Preference number: 1 (lower is better)
Translates to: GSGHHFAGCATWRSH*QYQRSQSGWSYLAV
Trigger: TACAGCTAGATAACTCCATCCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp TGCACACAACTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTaGACAGGGACTGACACCCTACAGTGCAAACGACTTTATCATATT +
Preference number: 1 (lower is better)
Translates to: CTQLCVASHKASVHN*TGTDTLQCKRLYHI
Trigger: AATATGATAAAGTCGTTTGCACTGTAGGGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAGTTGTGTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp TGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGCTTCTGTGTGTTaGCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGGAGTGC +
Preference number: 1 (lower is better)
Translates to: CESRSKEKPAFASVC*HRRLAIFQLLSLEC
Trigger: GCACTCCAGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTCCTGGATTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 90 bp AATTCCTGTGTGCCGTTTGTAGTGCTTGAGCATGTTGACCTTCTGTaGAAACTTGCGGTGACATTCCTTGCACTCATACTCCTTGATGCC +
Preference number: 1 (lower is better)
Translates to: NSCVPFVVLEHVDLL*KLAVTFLALILLDA
Trigger: GGCATCAAGGAGTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACAGAAGGTCAACATGCTCAAGCACTACAAACGGCACACAGGAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 90 bp ACAGTATCAAAGGTCACAGTCAGGATGGAGTTATCTAGCTGTAGCTaGCGATCAGGGTTGGTAAGATGTCCAACAGCCACTGGCTGTAAA +
Preference number: 1 (lower is better)
Translates to: TVSKVTVRMELSSCS*RSGLVRCPTATGCK
Trigger: TTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCAGCTACAGCTAGATAACTCCATCCTGACTGTGACCTTTGATACTGT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 90 bp GTCTCCACAAACCTCAGAATCTATGGTAGTCACAGGCACTGCTTCTaGCTTTGGATACTGACTGAGAATGGTGTGAAGGAGCAAAGATCT +
Preference number: 1 (lower is better)
Translates to: VSTNLRIYGSHRHCF*LWILTENGVKEQRS
Trigger: AGATCTTTGCTCCTTCACACCATTCTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTGACTACCATAGATTCTGAGGTTTGTGGAGAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR GCA 90 bp AGAATGGTCTCCACAAACCTCAGAATCTATGGTAGTCACAGGCACTaGTTCTGCCTTTGGATACTGACTGAGAATGGTGTGAAGGAGCAA +
Preference number: 1 (lower is better)
Translates to: RMVSTNLRIYGSHRH*FCLWILTENGVKEQ
Trigger: TTGCTCCTTCACACCATTCTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTGACTACCATAGATTCTGAGGTTTGTGGAGACCATTCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR TCA 90 bp CCAGGTACAACTTTATCATGGGCAGGAGAGCAGAGGGCCAGCAATTaGAAAACACAGGTCACAGCACCTTTATTTATCACCATACAAACA +
Preference number: 1 (lower is better)
Translates to: PGTTLSWAGEQRASN*KTQVTAPLFITIQT
Trigger: TGTTTGTATGGTGATAAATAAAGGTGCTGTGACCTGTGTTTTTCAATTGCTGGCCCTCTGCTCTCCTGCCCATGATAAAGTTGTACCTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000095849.10
3UTR CCA 90 bp GAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTaGAGTGTAGAGGTGCCTTTGTTTTGCTATCCAGTTGCTATCTGC +
Preference number: 1 (lower is better)
Translates to: EHFLRINNGLCMWGT*SVEVPLFCYPVAIC
Trigger: GCAGATAGCAACTGGATAGCAAAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 90 bp CAGGTCACAGCACCTTTATTTATCACCATACAAACAGATGTGACATaGAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAA +
Preference number: 1 (lower is better)
Translates to: QVTAPLFITIQTDVT*NTLRVTEWSPQTSE
Trigger: TTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACATCTGTTTGTATGGTGATAAATAAAGGTGCTGTGACCTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CCA 90 bp AAACAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTaGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTGCTATCCAGTT +
Preference number: 1 (lower is better)
Translates to: KQPEHFLRINNGLCM*GTWSVEVPLFCYPV
Trigger: AACTGGATAGCAAAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTGTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 90 bp AAACACAGGTCACAGCACCTTTATTTATCACCATACAAACAGATGTaGCATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCT +
Preference number: 1 (lower is better)
Translates to: KHRSQHLYLSPYKQM*HETPSELQNGLHKP
Trigger: AGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACATCTGTTTGTATGGTGATAAATAAAGGTGCTGTGACCTGTGTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CCA 90 bp ACACTTCTCTCCTACAGAGCTGAACCTCTGTATTTCATAGGAAATTaGTTTTCAGACATAACCACCTTTGGAATTAAGGCTTACACAGAA +
Preference number: 1 (lower is better)
Translates to: TLLSYRAEPLYFIGN*FSDITTFGIKAYTE
Trigger: TTCTGTGTAAGCCTTAATTCCAAAGGTGGTTATGTCTGAAAACCAATTTCCTATGAAATACAGAGGTTCAGCTCTGTAGGAGAGAAGTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp AGTGCGAAGCGTCGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTTGTGCACCCCACTCGGAAGAACTTaGGCCCACAGATCTCGCAGG +
Preference number: 2 (lower is better)
Translates to: SAKRRWQMLQPWPFSLCTPLGRT*AHRSRR
Trigger: CCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGG...GGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp AGTGCGAAGCGTCGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTaGTGCACCTCCATGATGTGCTTCAGGTATTCCTTCCCACGGCCG +
Preference number: 2 (lower is better)
Translates to: SAKRRWQMLQPWPFS*CTSMMCFRYSFPRP
Trigger: CGGCCGTGGGAAGGAATACCTGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTTGTGCACCTCCATGATGTGCATGAACTCCTCCCGCTaGTGGTCATCCATTAGCGCG +
Preference number: 2 (lower is better)
Translates to: RWQMLQPWPFSLCTSMMCMNSSR*WSSISA
Trigger: CGCGCTAATGGATGACCACCAGCGGGAGGAGTTCAT...GCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp AGGTGGTCCAGATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTaGCGTCGCATATGTCTGCTCATGGAGGCCCGGGTTGACACTTTG +
Preference number: 2 (lower is better)
Translates to: RWSRSSIRTARTSGC*RRICLLMEARVDTL
Trigger: CAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCTGGACCACCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTGGTCCAGATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTTGCGTCGCATGCAGCTGTACTTGTGTaGCTCAGAGTCTGCGCTCTC +
Preference number: 2 (lower is better)
Translates to: VVQIVNPNSEDLGVLASHAAVLV*LRVCAL
Trigger: GAGAGCGCAGACTCTGAGCCACACAAGTACAGCTGC...ATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCTGGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGGTATCCTCAGGCACTaGAGCCCCTGCCTCTTCCTC +
Preference number: 2 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAGILRH*SPCLFL
Trigger: GAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp CCTCGGGGTGCTTGCGTCGCATATGTCTGCTCATGGAGGCCCGGGTaGACACTTTGGTGCCACATAGTTGGCAACTCTGTGCTTCCACCT +
Preference number: 2 (lower is better)
Translates to: PRGACVAYVCSWRPG*TLWCHIVGNSVLPP
Trigger: AGGTGGAAGCACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TATTCACTGAAGGTGGTATCCTCAGGCACTGGAGCCCCTGCCTCTTCCTCTGGCGTAGGTGGCCTTGAGTaGGAAGCGTCGGTGGCAGAT +
Preference number: 2 (lower is better)
Translates to: YSLKVVSSGTGAPASSSGVGGLE*EASVAD
Trigger: ATCTGCCACCGACGCTTCGCACTCAAGGCCACCTAC...GCCAGAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACCACCTTCAGTGAATA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTCTCACCACCACATaGAAGCACCTCTCGGGCTTC +
Preference number: 2 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRALTTT*KHLSGF
Trigger: GAAGCCCGAGAGGTGCTTCCATGTGGTGGTGAGAGC...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 90 bp CAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAACACCTaGGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACC +
Preference number: 2 (lower is better)
Translates to: QTSEGDTVVWPGCNT*GKHMAEAPACQSHT
Trigger: GGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 90 bp TGTCTGGGGCACTGCTCGCCAGGTGAGTGGGTGCTGCTCACTGAGTaGGTTCCCCAAGGGTGTGATGGAGTTTACCAGTGTGGTAAGGTT +
Preference number: 2 (lower is better)
Translates to: CLGHCSPGEWVLLTE*VPQGCDGVYQCGKV
Trigger: AACCTTACCACACTGGTAAACTCCATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTCCATCTGCCAAGAGGTaGGACCTGTGTGGATGTGGA +
Preference number: 2 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAPSAKR*DLCGCG
Trigger: TCCACATCCACACAGGTCTCACCTCTTGGCAGATGG...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACCAAGATGTCTTCTGTaGCTGAGCTGGGGGCCTCAT +
Preference number: 2 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAPRCLL*LSWGPH
Trigger: ATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 90 bp CAGATCTCGCAGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTGCTaGTTCATGTTGCTCCGACAGGAGAACACCTTGCCACACACTGGG +
Preference number: 2 (lower is better)
Translates to: QISQVYFLSPWVSRC*FMLLRQENTLPHTG
Trigger: CCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp TCCACTCGGAAGAACTTGCGCCCACAGATCTCGCAGGTGTACTTCTaGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTTGCTCCGACAG +
Preference number: 2 (lower is better)
Translates to: STRKNLRPQISQVYF*SPWVSRCLFMLLRQ
Trigger: CTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp AAGTGGACATGGATGTGGTCCCTGAGTACGTCCACTCGGAAGAACTaGCGCCCACAGATCTCGCAGGTGTACTTCTTGTCACCGTGGGTC +
Preference number: 2 (lower is better)
Translates to: KWTWMWSLSTSTRKN*RPQISQVYFLSPWV
Trigger: GACCCACGGTGACAAGAAGTACACCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGACGTACTCAGGGACCACATCCATGTCCACTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGACATAGGAGAGGGCGATGTCTTCTGTGCCTaGGCTGGGGGCCTCATGATA +
Preference number: 2 (lower is better)
Translates to: AFHETILQQAFMPDIGEGDVFCA*AGGLMI
Trigger: TATCATGAGGCCCCCAGCTCAGGCACAGAAGACATC...GCCCTCTCCTATGTCGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR CCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGCCTCAGAGCTGGGGGTaGCCAGTTTGTATTCTGTCA +
Preference number: 2 (lower is better)
Translates to: PVTMGIARVCASHVPSELPQSWG*PVCILS
Trigger: TGACAGAATACAAACTGGCCACCCCCAGCTCTGAGG...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 90 bp CAGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTaGCTCCGACAGGAGAACACCTTGCCACACACTGGGCATCCAGAA +
Preference number: 2 (lower is better)
Translates to: QVYFLSPWVSRCLFM*LRQENTLPHTGHPE
Trigger: TTCTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp TCCTTCCCACGGCCGAAAGTGAGCTGGCACCTCTTGCAGCTGTACTaGTGTGGCTCAGAGTCTGCGCTCTCATCAGAGTTGTCATCATTC +
Preference number: 2 (lower is better)
Translates to: SFPRPKVSWHLLQLY*CGSESALSSELSSF
Trigger: GAATGATGACAACTCTGATGAGAGCGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAGGTGCCAGCTCACTTTCGGCCGTGGGAAGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ACATCTGCTGCTGCTCATTCTGTACCTGGGGTTGCACCGCCTGCTGCGGGGCTGCAGCTCATTCATCTTTaGGAGGCTATAAAGGCAAAG +
Preference number: 2 (lower is better)
Translates to: TSAAAHSVPGVAPPAAGLQLIHL*EAIKAK
Trigger: CTTTGCCTTTATAGCCTCTCAAAGATGAATGAGCTG...CAGCCCCGCAGCAGGCGGTGCAACCCCAGGTACAGAATGAGCAGCAGCAGATGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATGCCTACTGTGTGGATaGGCTTGTGTGTCTCCATTG +
Preference number: 2 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAACLLCG*ACVSPL
Trigger: CAATGGAGACACACAAGCTCATCCACACAGTAGGCA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAGGAGAAACCTGCGTTTaGTTCTGTGTGTTGCCACAG +
Preference number: 2 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAGETCV*FCVLPQ
Trigger: CTGTGGCAACACACAGAAGCAAACGCAGGTTTCTCC...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTACTCTGTCCTCACCTTaGCTCTTCATGTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPTLSSP*LFMSLC
Trigger: GCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGT...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGGGCGACCCACAGACCTaGAGACTTGTCCTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPGDPQT*RLVLKC
Trigger: GCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCC...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR GCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCGGCGACCCACAGACCTaGAGACTTGTCCTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTGDPQT*RLVLKC
Trigger: GCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCC...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TGGCGATCAGGGTTGGTAAGATGTCCAACAGCCACTGGCTGTAAATTGGTAAACGTCGGTGGCAGATGCTaGAGCCGTGGCCCTTCTCCT +
Preference number: 2 (lower is better)
Translates to: WRSGLVRCPTATGCKLVNVGGRC*SRGPSP
Trigger: AGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGAC...GTTTACCAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTCCTTGAAGTGGACATaGATGTGGTCCCTGAGTACG +
Preference number: 2 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPASLKWT*MWSLST
Trigger: CGTACTCAGGGACCACATCCATGTCCACTTCAAGGA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGTGCAGCTTCATATGGTaGCGCAGTGCATGCTTGGTC +
Preference number: 2 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRCSFIW*RSACLV
Trigger: GACCAAGCATGCACTGCGCCACCATATGAAGCTGCA...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp CTGAGGGTTTGTGGCTTCTGGCTGTGGGTGGATCTGGACATCATTTaGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGT +
Preference number: 2 (lower is better)
Translates to: LRVCGFWLWVDLDII*PVVQHGGATDSIKG
Trigger: ACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGAAGCCACAAACCCTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCGATGTCTTCTGTGCCTaGGCTGGGGGCCTCATGATA +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTDVFCA*AGGLMI
Trigger: TATCATGAGGCCCCCAGCTCAGGCACAGAAGACATC...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCTGGATGGCAGAGTCCTaGGATAGCTCCAGAGGAGCA +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTWMAES*DSSRGA
Trigger: TGCTCCTCTGGAGCTATCTCAGGACTCTGCCATCCA...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGAGCTGGACGTGTTTCTaGAGCATGTACTCTGTGACG +
Preference number: 2 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRSWTCF*SMYSVT
Trigger: CGTCACAGAGTACATGCTTCAGAAACACGTCCAGCT...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGTCAGAACCCCACTGCTaGAGCTCAGCCTATTCTGCA +
Preference number: 2 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMSEPHC*SSAYSA
Trigger: TGCAGAATAGGCTGAGCTGCAGCAGTGGGGTTCTGA...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGGTGGTCTGGCCAGGCTaGAACACCTTGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPVVWPG*NTLGKH
Trigger: GTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR GCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGGAGCAAGGAGAAACCTaGGTTTGCTTCTGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: PVTMGIARVCASHVPSELEQGET*VCFCVL
Trigger: CAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTC...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTCACACAAGGCATCTGTaGACAACTGGACAGGGACTG +
Preference number: 2 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTHTRHL*TTGQGL
Trigger: CAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTG...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ATCTGGACATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAGGCGACCCACAGACCTaGAGACTTGTCCTCAAGTGC +
Preference number: 2 (lower is better)
Translates to: IWTSFCRLCNMAEPLTVSGDPQT*RLVLKC
Trigger: GCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCC...TGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCACAGGCACTGCTTCTaGCTTTGGATACTGACTGAG +
Preference number: 2 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPHRHCF*LWILTE
Trigger: CTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR GCA 90 bp ATCTGGACATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAGGACCTCGGGGTGCTTaGGTCGCATATGTCTGCTCA +
Preference number: 2 (lower is better)
Translates to: IWTSFCRLCNMAEPLTVSGPRGA*VAYVCS
Trigger: TGAGCAGACATATGCGACGCAAGCACCCCGAGGTCC...TGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGCAGGCTGCAACACCTTaGGAAAACACATGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRQAATP*ENTWQK
Trigger: CTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTG...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGACAGATCAAATCTCCCTaGTCCTTGGAATATCACGCC +
Preference number: 2 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRQIKSP*SLEYHA
Trigger: GGCGTGATATTCCAAGGACCAGGGAGATTTGATCTG...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTGCATCTGTGCACAACTaGACAGGGACTGACACCCTA +
Preference number: 2 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTASVHN*TGTDTL
Trigger: TAGGGTGTCAGTCCCTGTCCAGTTGTGCACAGATGC...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCAGACCTGTGTGGATGTaGAAAGGGTGTGGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTRPVWM*KGCGSG
Trigger: GCCTGACCCACACCCTTTCCACATCCACACAGGTCT...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTATGTGGGGTACCTaGAGTGTAGAGGTGCCTTTG +
Preference number: 2 (lower is better)
Translates to: SSRGASGFKREGSLCTQLCMWGT*SVEVPL
Trigger: CAAAGGCACCTCTACACTCCAGGTACCCCACATACA...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGTACTTCTTGTCACCGTaGGTCAGCAGGTGCTTGTTC +
Preference number: 2 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTGACCCACGGTGACAAGAAGTA...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCAGTGCGAAGCGTCGGTaGCAGATGCTGCAGCCGTGG +
Preference number: 2 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFSAKRR*QMLQPW
Trigger: CCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTGCTTGCCTACTGTGTaGATGAGCTTGTGTGTCTCC +
Preference number: 2 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPCLPTV*MSLCVS
Trigger: GGAGACACACAAGCTCATCCACACAGTAGGCAAGCA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp ACGGTGATGTTGGTTAGACCAACTGAGCTTGATGGAGCAGTCACATaGGGGTCCCCTAGGGTCACCACCACCTGTTGGATACTCTGTACA +
Preference number: 2 (lower is better)
Translates to: TVMLVRPTELDGAVT*GSPRVTTTCWILCT
Trigger: TGTACAGAGTATCCAACAGGTGGTGGTGACCCTAGGGGACCCCAATGTGACTGCTCCATCAAGCTCAGTTGGTCTAACCAACATCACCGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp TTTGTGGCTTCTGGCTGTGGGTGGATCTGGACATCATTTTGCCGGTaGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTC +
Preference number: 2 (lower is better)
Translates to: FVASGCGWIWTSFCR*CNMAEPLTVSKVTV
Trigger: GACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGAAGCCACAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGTCTCTCCTACAGAGCTaGACCTCTGTATTTCATAGG +
Preference number: 2 (lower is better)
Translates to: PVTMGIARVCASHVPSELSLLQS*TSVFHR
Trigger: CCTATGAAATACAGAGGTTCAGCTCTGTAGGAGAGA...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAGTGGTCTGGCCAGGCTaGAACACCTTGGGAAAACAC +
Preference number: 2 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAVVWPG*NTLGKH
Trigger: GTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGAGCAAGGAGAAACCTaGGTTTGCTTCTGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: ASGFKREGSLCTQLCVASEQGET*VCFCVL
Trigger: CAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAGTTAGTATCCATCTCTaGAGGATGGCTGCCCATATT +
Preference number: 2 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAVSIHL*RMAAHI
Trigger: AATATGGGCAGCCATCCTGCAGAGATGGATACTAAC...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGTTAGTATCCATCTCTaGAGGATGGCTGCCCATATT +
Preference number: 2 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAVSIHL*RMAAHI
Trigger: AATATGGGCAGCCATCCTGCAGAGATGGATACTAAC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACACAGAAAGGAAACATaGTTCACTCCCCATCCTTCA +
Preference number: 2 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAHRKET*FTPHPS
Trigger: TGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGTGTGTCACAGACACTTaGGGAGAAAGGCTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: PVTMGIARVCASHVPSELCVTDT*GERLVL
Trigger: TAAAACCAGCCTTTCTCCCCAAGTGTCTGTGACACA...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGTGTACTTCTGCACGTTaGGGTCAGGCAGGTTCTCCC +
Preference number: 2 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMCTSAR*GQAGSP
Trigger: GGGAGAACCTGCCTGACCCCAACGTGCAGAAGTACA...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 90 bp AGTTGCTATCTGCAGGGGAGCTGTAACTATGGTGAGACAACCTGCTaGCTTCAGCCAATGACTGGGGAGACCATGTGTCACAGACACTTG +
Preference number: 2 (lower is better)
Translates to: SCYLQGSCNYGETTC*LQPMTGETMCHRHL
Trigger: CAAGTGTCTGTGACACATGGTCTCCCCAGTCATTGGCTGAAGCAAGCAGGTTGTCTCACCATAGTTACAGCTCCCCTGCAGATAGCAACT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAACTGAGACTTCAGAATaGCTTCTCCCTGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: ASGFKREGSLCTQLCVASTETSE*LLPACE
Trigger: TTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGT...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGACTGAGACTTCAGAATaGCTTCTCCCTGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: SSRGASGFKREGSLCTQLTETSE*LLPACE
Trigger: TTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGT...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGCAAACAGATGTGACATaGAACACCCTCAGAGTTACA +
Preference number: 2 (lower is better)
Translates to: PVTMGIARVCASHVPSELQTDVT*NTLRVT
Trigger: TGTAACTCTGAGGGTGTTTCATGTCACATCTGTTTG...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR TCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGATTGTGTTCCTCTCACTaGATGTCTTCCCACACAATT +
Preference number: 2 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRLCSSH*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGTGAGAGGAACACAA...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTCACACAAGGCATCTGTaGACAACTGGACAGGGACTG +
Preference number: 2 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAHTRHL*TTGQGL
Trigger: CAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTG...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTATCCAGTTGCTATCTaGAGGGGAGCTGTAACTATG +
Preference number: 2 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPYPVAI*RGAVTM
Trigger: CATAGTTACAGCTCCCCTGCAGATAGCAACTGGATA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGGACAGGAGAACACCTTaGCACACACTGGGCATCCAG +
Preference number: 2 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKDRRTP*HTLGIQ
Trigger: CTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTC...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ATCTGGACATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAGCTTTCTCTTGTGGCTaGGCTTGGCAGCCTTTCCAT +
Preference number: 2 (lower is better)
Translates to: IWTSFCRLCNMAEPLTVSAFSCG*AWQPFH
Trigger: ATGGAAAGGCTGCCAAGCGCAGCCACAAGAGAAAGC...TGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCGCATCTGTGCACAACTaGACAGGGACTGACACCCTA +
Preference number: 2 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSASVHN*TGTDTL
Trigger: TAGGGTGTCAGTCCCTGTCCAGTTGTGCACAGATGC...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCACACAGAAAGGAAACATaGTTCACTCCCCATCCTTCA +
Preference number: 2 (lower is better)
Translates to: ASGFKREGSLCTQLCVASHRKET*FTPHPS
Trigger: TGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGGCTCTCACCACCACATaGAAGCACCTCTCGGGCTTC +
Preference number: 2 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRALTTT*KHLSGF
Trigger: GAAGCCCGAGAGGTGCTTCCATGTGGTGGTGAGAGC...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTCCATCTCTGCAGGATaGCTGCCCATATTTGAATAC +
Preference number: 2 (lower is better)
Translates to: SSRGASGFKREGSLCTQLSISAG*LPIFEY
Trigger: GTATTCAAATATGGGCAGCCATCCTGCAGAGATGGA...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCTGGACATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCACACCTTGCCACACACTaGGCATCCAGAAGGTTCCTT +
Preference number: 2 (lower is better)
Translates to: IWTSFCRLCNMAEPLTVSHLATH*ASRRFL
Trigger: AAGGAACCTTCTGGATGCCCAGTGTGTGGCAAGGTG...TGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGATCAGAACCCCACTGCTaGAGCTCAGCCTATTCTGCA +
Preference number: 2 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRSEPHC*SSAYSA
Trigger: TGCAGAATAGGCTGAGCTGCAGCAGTGGGGTTCTGA...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGCCATCTCTTCCTTATaGTCCATCTGTGTAACAGAA +
Preference number: 2 (lower is better)
Translates to: ASGFKREGSLCTQLCVASAISSL*SICVTE
Trigger: TTCTGTTACACAGATGGAGCATAAGGAAGAGATGGC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCTCCATGCTTACCTTCTaGCAGTTCTTCCTGCTCCAG +
Preference number: 2 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSSMLTF*QFFLLQ
Trigger: CTGGAGCAGGAAGAACTGGCAGAAGGTAAGCATGGA...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTGCTTCTGGCTGTGGGTaGATCTGGACATCATTTTGC +
Preference number: 2 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAASGCG*IWTSFC
Trigger: GCAAAATGATGTCCAGATCCACCCACAGCCAGAAGC...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAGATGTCTTCTGTGCCTaGGCTGGGGGCCTCATGATA +
Preference number: 2 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMADVFCA*AGGLMI
Trigger: TATCATGAGGCCCCCAGCTCAGGCACAGAAGACATC...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTCTAGTGATGTTTGATTaGGCCCAGTGCTCATTTGGG +
Preference number: 2 (lower is better)
Translates to: TLPVWYPANTSRPQNPTALVMFD*AQCSFG
Trigger: CCCAAATGAGCACTGGGCTCAATCAAACATCACTAG...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTAAGGCTGGTTTTATCTaGATTCCTGCTTATAACAGC +
Preference number: 2 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPKAGFI*IPAYNS
Trigger: GCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTT...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGAAGGCTGGTTTTATCTaGATTCCTGCTTATAACAGC +
Preference number: 2 (lower is better)
Translates to: SSRGASGFKREGSLCTQLKAGFI*IPAYNS
Trigger: GCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTT...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCACACATGGATGTGGTCCCTaGGTACGTCCACTCGGAAGA +
Preference number: 2 (lower is better)
Translates to: LVCLHCVPLTECLPTQFTHGCGP*VRPLGR
Trigger: TCTTCCGAGTGGACGTACTCAGGGACCACATCCATG...TGTGAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTGAGCAAGGAGAAACCTaGGTTTGCTTCTGTGTGTTG +
Preference number: 2 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAEQGET*VCFCVL
Trigger: CAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTC...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGACTCTGTCCTCACCTTaGCTCTTCATGTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRTLSSP*LFMSLC
Trigger: GCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGT...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCACTCTGTCCTCACCTTaGCTCTTCATGTCCCTGTGC +
Preference number: 2 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFTLSSP*LFMSLC
Trigger: GCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGT...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTTCATGCACACGCATGTaGTCTTTCAGCATGTCCTTC +
Preference number: 2 (lower is better)
Translates to: TLPVWYPANTSRPQNPTASCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAAGAGCACATGCGTGTGCATGA...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCTTGGCAGCCTTTCCATaGTTACCTTCTGCCAGTTCT +
Preference number: 2 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSLAAFP*LPSASS
Trigger: AGAACTGGCAGAAGGTAAGCATGGAAAGGCTGCCAA...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGCAAACTCTTCCTGTTTaGTATCCAGCAAACACCTCA +
Preference number: 2 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMQTLPV*YPANTS
Trigger: TGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTG...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGCAGATCAAATCTCCCTaGTCCTTGGAATATCACGCC +
Preference number: 2 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMQIKSP*SLEYHA
Trigger: GGCGTGATATTCCAAGGACCAGGGAGATTTGATCTG...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGCATCTGTGCACAACTaGACAGGGACTGACACCCTA +
Preference number: 2 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFASVHN*TGTDTL
Trigger: TAGGGTGTCAGTCCCTGTCCAGTTGTGCACAGATGC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCCACAGAAAGGAAACATaGTTCACTCCCCATCCTTCA +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTHRKET*FTPHPS
Trigger: TGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGCTCTCACCACCACATaGAAGCACCTCTCGGGCTTC +
Preference number: 2 (lower is better)
Translates to: TDTWGERLVLSEFLLITAALTTT*KHLSGF
Trigger: GAAGCCCGAGAGGTGCTTCCATGTGGTGGTGAGAGC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGCCTATGATGGCAGCCTaGCCTGTTACCATGGGGATA +
Preference number: 2 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRPMMAA*PVTMGI
Trigger: TATCCCCATGGTAACAGGCCAGGCTGCCATCATAGG...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCCTTGGGGAGAAAGGCTaGTTTTATCTGAATTCCTGC +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTLGEKG*FYLNSC
Trigger: GCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAG...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCATGCATCGATGGTGGTaGTCTCGGGGAGGTGGTCCA +
Preference number: 2 (lower is better)
Translates to: GERLVLSEFLLITAGSRCMHRWW*SRGGGP
Trigger: TGGACCACCTCCCCGAGACCACCACCATCGATGCAT...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGATGGAGCAGTCACATTaGGGTCCCCTAGGGTCACCA +
Preference number: 2 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVMEQSH*GPLGSP
Trigger: TGGTGACCCTAGGGGACCCCAATGTGACTGCTCCAT...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGATCGGGATTCAAGCGTaGGGGCTCACTTTGCACACA +
Preference number: 2 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWIGIQA*GLTLHT
Trigger: TGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGAT...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCATCTCTCCTACAGAGCTaGACCTCTGTATTTCATAGG +
Preference number: 2 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEASLLQS*TSVFHR
Trigger: CCTATGAAATACAGAGGTTCAGCTCTGTAGGAGAGA...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGACCATCTGCCAAGAGGTaGGACCTGTGTGGATGTGGA +
Preference number: 2 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRPSAKR*DLCGCG
Trigger: TCCACATCCACACAGGTCTCACCTCTTGGCAGATGG...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCTTTGCTTCTGTGTGTTaGCACAGAAGGCTAGCCATA +
Preference number: 2 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSFASVC*HRRLAI
Trigger: TATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAA...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCAGACCTGTGTGGATGTaGAAAGGGTGTGGGTCAGGC +
Preference number: 2 (lower is better)
Translates to: GERLVLSEFLLITAGSRCRPVWM*KGCGSG
Trigger: GCCTGACCCACACCCTTTCCACATCCACACAGGTCT...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCGAGGTGAGACCTGTGTaGATGTGGAAAGGGTGTGGG +
Preference number: 2 (lower is better)
Translates to: GERLVLSEFLLITAGSRCEVRPV*MWKGCG
Trigger: CCCACACCCTTTCCACATCCACACAGGTCTCACCTC...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCCCTACGGATCAACAATaGTTTATGTATGTGGGGTAC +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTPTDQQ*FMYVGY
Trigger: GTACCCCACATACATAAACCATTGTTGATCCGTAGG...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAACTTCTCCCTGCTTGTaGATCCAGGAGCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVTSPCL*IQEQGE
Trigger: TTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATCACACCTGTGTGGATaGGTTTGTGGCGCTCCAAGT +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRSHLCG*VCGAPS
Trigger: ACTTGGAGCGCCACAAACTCATCCACACAGGTGTGA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGTGTGGCTCAGAGTCTaGGCTCTCATCAGAGTTGTC +
Preference number: 2 (lower is better)
Translates to: VCFCVLPQKASHISVIVTVWLRV*ALIRVV
Trigger: GACAACTCTGATGAGAGCGCAGACTCTGAGCCACAC...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGTGCACCTCCATGATGTaGTTCAGGTATTCCTTCCCA +
Preference number: 2 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRCTSMM*FRYSFP
Trigger: TGGGAAGGAATACCTGAAGCACATCATGGAGGTGCA...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTACAGGCTGCAACACCTTaGGAAAACACATGGCAGAAG +
Preference number: 2 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVQAATP*ENTWQK
Trigger: CTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTG...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCCTATGATGGCAGCCTaGCCTGTTACCATGGGGATA +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFPMMAA*PVTMGI
Trigger: TATCCCCATGGTAACAGGCCAGGCTGCCATCATAGG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 2 (lower is better)
Translates to: VCFCVLPQKASHISVIVTAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAGTGTGGATGAGTTTGTaGCGCTCCAAGTTCCCAATG +
Preference number: 2 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVVWMSL*RSKFPM
Trigger: CATTGGGAACTTGGAGCGCCACAAACTCATCCACAC...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCCCGGGTTGACACTTTaGTGCCACATAGTTGGCAAC +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFPGLTL*CHIVGN
Trigger: GTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGCTAGTGATGTTTGATTaGGCCCAGTGCTCATTTGGG +
Preference number: 2 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWLVMFD*AQCSFG
Trigger: CCCAAATGAGCACTGGGCTCAATCAAACATCACTAG...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTATCAGAACCCCACTGCTaGAGCTCAGCCTATTCTGCA +
Preference number: 2 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALSEPHC*SSAYSA
Trigger: TGCAGAATAGGCTGAGCTGCAGCAGTGGGGTTCTGA...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTGGAGAAACCTGCGTTTaGTTCTGTGTGTTGCCACAG +
Preference number: 2 (lower is better)
Translates to: YFQETQDQGRSKASSSLSGETCV*FCVLPQ
Trigger: CTGTGGCAACACACAGAAGCAAACGCAGGTTTCTCC...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCACAGGCACTGCTTCTaGCTTTGGATACTGACTGAG +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFHRHCF*LWILTE
Trigger: CTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR CCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGCAAACTCTTCCTGTTTaGTATCCAGCAAACACCTCA +
Preference number: 2 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWQTLPV*YPANTS
Trigger: TGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTG...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTAAGTGGACATGGATGTaGTCCCTGAGTACGTCCACT +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFKWTWM*SLSTST
Trigger: AGTGGACGTACTCAGGGACCACATCCATGTCCACTT...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 2 (lower is better)
Translates to: YFQETQDQGRSKASSSLSSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGATTCTGCTTTCTCTTGTaGCTGCGCTTGGCAGCCTTT +
Preference number: 2 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRFCFLL*LRLAAF
Trigger: AAAGGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAA...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGACTGAGACTTCAGAATaGCTTCTCCCTGCTTGTGAA +
Preference number: 2 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWTETSE*LLPACE
Trigger: TTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGT...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATGCACTCATACTCCTTaGTGCCTTTGTGCAGCTTCA +
Preference number: 2 (lower is better)
Translates to: TDTWGERLVLSEFLLITACTHTP*CLCAAS
Trigger: TGAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAATCTGGACATCATTTTaGCGGTTGTGCAACATGGCG +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRIWTSF*RLCNMA
Trigger: CGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCTTCAGTTATTGTCACTaGAGTGCTAAAGAAAACAGA +
Preference number: 2 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTFSYCH*SAKENR
Trigger: TCTGTTTTCTTTAGCACTCCAGTGACAATAACTGAA...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTGTGTCACAGACACTTaGGGAGAAAGGCTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVCVTDT*GERLVL
Trigger: TAAAACCAGCCTTTCTCCCCAAGTGTCTGTGACACA...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 90 bp CCAGCAAAGCTGATAGGTAGCTCTGTAATGCTAATCTCAGTGATCTaGACATTTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTC +
Preference number: 2 (lower is better)
Translates to: PAKLIGSSVMLISVI*TFANSSCLVSSKHL
Trigger: GAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAAATGTCAAGATCACTGAGATTAGCATTACAGAGCTACCTATCAGCTTTGCTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATCTCTCCTACAGAGCTaGACCTCTGTATTTCATAGG +
Preference number: 2 (lower is better)
Translates to: TDTWGERLVLSEFLLITASLLQS*TSVFHR
Trigger: CCTATGAAATACAGAGGTTCAGCTCTGTAGGAGAGA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAACCATCTGCCAAGAGGTaGGACCTGTGTGGATGTGGA +
Preference number: 2 (lower is better)
Translates to: KEINIDHERAIIHNVVMKPSAKR*DLCGCG
Trigger: TCCACATCCACACAGGTCTCACCTCTTGGCAGATGG...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTTTGCTTCTGTGTGTTaGCACAGAAGGCTAGCCATA +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFFASVC*HRRLAI
Trigger: TATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAA...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATATCCAGTTGCTATCTaGAGGGGAGCTGTAACTATG +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRYPVAI*RGAVTM
Trigger: CATAGTTACAGCTCCCCTGCAGATAGCAACTGGATA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGCTTCATTCAGGGATGTaGCTAAGCTGCACCATAATA +
Preference number: 2 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWLHSGM*LSCTII
Trigger: TATTATGGTGCAGCTTAGCCACATCCCTGAATGAAG...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGTATTTAAGCAAACAGTaGCAGCAGGAGAGACTGTAC +
Preference number: 2 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWYLSKQ*QQERLY
Trigger: GTACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATA...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCTTGGGGAGAAAGGCTaGTTTTATCTGAATTCCTGC +
Preference number: 2 (lower is better)
Translates to: GERLVLSEFLLITAGSRCLGEKG*FYLNSC
Trigger: GCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGTGTCACAGACACTTaGGGAGAAAGGCTGGTTTTA +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRCVTDT*GERLVL
Trigger: TAAAACCAGCCTTTCTCCCCAAGTGTCTGTGACACA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR GCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAATGGCCCTTCTCCTTGTaGACCTCCATGATGTGCTTC +
Preference number: 2 (lower is better)
Translates to: KEINIDHERAIIHNVVMKWPFSL*TSMMCF
Trigger: GAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCA...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCAAACTCTTCCTGTTTaGTATCCAGCAAACACCTCA +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFQTLPV*YPANTS
Trigger: TGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGACTTCATTCAGGGATGTaGCTAAGCTGCACCATAATA +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRLHSGM*LSCTII
Trigger: TATTATGGTGCAGCTTAGCCACATCCCTGAATGAAG...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTATTTAAGCAAACAGTaGCAGCAGGAGAGACTGTAC +
Preference number: 2 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFYLSKQ*QQERLY
Trigger: GTACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATA...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGACTCAGAGTTACAGAATaGTCTCCACAAACCTCAGAA +
Preference number: 2 (lower is better)
Translates to: WGERLVLSEFLLITAGSRLRVTE*SPQTSE
Trigger: TTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAG...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR TCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAACTTCTCCCTGCTTGTaGATCCAGGAGCAAGGAGAA +
Preference number: 2 (lower is better)
Translates to: KEINIDHERAIIHNVVMKTSPCL*IQEQGE
Trigger: TTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGT...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR TCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAATGTGCAAACTTGCGGTaGCATTCCTTGCACTCATAC +
Preference number: 2 (lower is better)
Translates to: KEINIDHERAIIHNVVMKCANLR*HSLHSY
Trigger: GTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACA...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GCTGCAGGGGCCTGTGGCGGCTGCAGCACATCTGTCTaGGGCACTGCTCGCCAGGTGAGTGGGTGCTGCTCA +
Preference number: 3 (lower is better)
Translates to: AAGACGGCSTSV*GTARQVSGCCS
Trigger: TGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCAGCCGCCACAGGCCCCTGCAGC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GGCCTGTGGCGGCTGCAGCACATCTGTCTGGGGCACTaGTCGCCAGGTGAGTGGGTGCTGCTCACTGAGTTG +
Preference number: 3 (lower is better)
Translates to: GLWRLQHICLGH*SPGEWVLLTEL
Trigger: CAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCAGCCGCCACAGGCC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GTGGATGACCATGTGGGCATGGTAGGTGGCCTTGAGTaGGAAGCGTCGGTGGCAGATGCTGCAGCCGTGGCC +
Preference number: 3 (lower is better)
Translates to: VDDHVGMVGGLE*EASVADAAAVA
Trigger: GGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACTCAAGGCCACCTACCATGCCCACATGGTCATCCAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CAGGCCCAGCGCAGGCTGGACAATGCCGATGGAAGATaGATCGATGGTGGTGGTCTCGGGGAGGTGGTCCAG +
Preference number: 3 (lower is better)
Translates to: QAQRRLDNADGR*IDGGGLGEVVQ
Trigger: CTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp CCTGCTCCAGGCCCAGCGCAGGCTGGACAATGCCGATaGAAGATGCATCGATGGTGGTGGTCTCGGGGAGGT +
Preference number: 3 (lower is better)
Translates to: PAPGPAQAGQCR*KMHRWWWSRGG
Trigger: ACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp AGCCTGGCCTGTTACCATGGGGATAGCACGGGTTTGTaGCAGCCATGTTCCCTCAGAGCTGGGGGTGGCCAG +
Preference number: 3 (lower is better)
Translates to: SLACYHGDSTGL*QPCSLRAGGGQ
Trigger: CTGGCCACCCCCAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAGGCT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp CAGCGAGGACCTCGGGGTGCTTGCGTCGCATATGTCTaGTCATGGAGGCCCGGGTTGACACTTTGGTGCCAC +
Preference number: 3 (lower is better)
Translates to: QRGPRGACVAYV*SWRPGLTLWCH
Trigger: GTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTTaGGTCGCATATGTCTGCTCATGGAGGCCCGGGTTG +
Preference number: 3 (lower is better)
Translates to: DRQSEQRGPRGA*VAYVCSWRPGL
Trigger: CAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp TCCAGATCGTCAATCCGAACAGCGAGGACCTCGGGGTaGTTGCGTCGCATATGTCTGCTCATGGAGGCCCGG +
Preference number: 3 (lower is better)
Translates to: SRSSIRTARTSG*LRRICLLMEAR
Trigger: CCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCTGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GTTCTTCCTGCTCCAGGCCCAGCGCAGGCTGGACAATaGCGATGGAAGATGCATCGATGGTGGTGGTCTCGG +
Preference number: 3 (lower is better)
Translates to: VLPAPGPAQAGQ*RWKMHRWWWSR
Trigger: CCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGGAAGAAC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp CAGCACATCTGTCTGGGGCACTGCTCGCCAGGTGAGTaGGTGCTGCTCACTGAGTTGGTTCCCCAAGGGTGT +
Preference number: 3 (lower is better)
Translates to: QHICLGHCSPGE*VLLTELVPQGC
Trigger: ACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGTGCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp ACATCTGTCTGGGGCACTGCTCGCCAGGTGAGTGGGTaGTGCTCACTGAGTTGGTTCCCCAAGGGTGTGATG +
Preference number: 3 (lower is better)
Translates to: TSVWGTARQVSG*CSLSWFPKGVM
Trigger: CATCACACCCTTGGGGAACCAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCAGTGCCCCAGACAGATGT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GCGCAGGCTGGACAATGCCGATGGAAGATGCATCGATaGTGGTGGTCTCGGGGAGGTGGTCCAGATCGTCAA +
Preference number: 3 (lower is better)
Translates to: AQAGQCRWKMHR*WWSRGGGPDRQ
Trigger: TTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TCTGCCAGTTCTTCCTGCTCCAGGCCCAGCGCAGGCTaGACAATGCCGATGGAAGATGCATCGATGGTGGTG +
Preference number: 3 (lower is better)
Translates to: SASSSCSRPSAG*TMPMEDASMVV
Trigger: CACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTGCGCTGGGCCTGGAGCAGGAAGAACTGGCAGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp ACATCTGCTGCTGCTCATTCTGTACCTGGGGTTGCACCGCCTGCTGCGGGGCTGGAGGAGATCCCAATTTaGCCAATGAACTCCTCCCGC +
Preference number: 3 (lower is better)
Translates to: TSAAAHSVPGVAPPAAGLEEIPI*PMNSSR
Trigger: GCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTC...CAGCCCCGCAGCAGGCGGTGCAACCCCAGGTACAGAATGAGCAGCAGCAGATGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTCCACTCGGAAGAACTaGCGCCCACAGATCTCGCAG +
Preference number: 3 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPASTRKN*RPQISQ
Trigger: CTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CAGCCGTGGCCCTTCTCCTTGTGCACCTCCATGATGTaGTTCAGGTATTCCTTCCCACGGCCGAAAGTGAGC +
Preference number: 3 (lower is better)
Translates to: QPWPFSLCTSMM*FRYSFPRPKVS
Trigger: GCTCACTTTCGGCCGTGGGAAGGAATACCTGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TCCCTGTGCTGGACTATGGACCCTATGATGGCAGCCTaGCCTGTTACCATGGGGATAGCACGGGTTTGTGCC +
Preference number: 3 (lower is better)
Translates to: SLCWTMDPMMAA*PVTMGIARVCA
Trigger: GGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAGGCTGCCATCATAGGGTCCATAGTCCAGCACAGGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp GGACCTCGGGGTGCTTGCGTCGCATATGTCTGCTCATaGAGGCCCGGGTTGACACTTTGGTGCCACATAGTT +
Preference number: 3 (lower is better)
Translates to: GPRGACVAYVCS*RPGLTLWCHIV
Trigger: AACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp ATGGAAGATGCATCGATGGTGGTGGTCTCGGGGAGGTaGTCCAGATCGTCAATCCGAACAGCGAGGACCTCG +
Preference number: 3 (lower is better)
Translates to: MEDASMVVVSGR*SRSSIRTARTS
Trigger: CGAGGTCCTCGCTGTTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp CAGGCTGGACAATGCCGATGGAAGATGCATCGATGGTaGTGGTCTCGGGGAGGTGGTCCAGATCGTCAATCC +
Preference number: 3 (lower is better)
Translates to: QAGQCRWKMHRW*WSRGGGPDRQS
Trigger: GGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGCCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCATCGCAGGTGTACTTCTaGTCACCGTGGGTCAGCAGG +
Preference number: 3 (lower is better)
Translates to: ASGFKREGSLCTQLCVASSQVYF*SPWVSR
Trigger: CCTGCTGACCCACGGTGACAAGAAGTACACCTGCGA...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp ACATCTGCTGCTGCTCATTCTGTACCTGGGGTTGCACCGCCTGCTGCGGGGCTGTTGCACTCATACTCCTaGATGCCTTTGTGCAGCTTC +
Preference number: 3 (lower is better)
Translates to: TSAAAHSVPGVAPPAAGLLHSYS*MPLCSF
Trigger: GAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAA...CAGCCCCGCAGCAGGCGGTGCAACCCCAGGTACAGAATGAGCAGCAGCAGATGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp TCTTGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTTaGTCCGACAGGAGAACACCTTGCCACACACTGGGC +
Preference number: 3 (lower is better)
Translates to: SCHRGSAGACSC*SDRRTPCHTLG
Trigger: GCCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CCACACTCGGCGCACAGGTACTCCCGGATGTTGTCATaGACACGCATGTGCTCTTTCAGCATGTCCTTCCTG +
Preference number: 3 (lower is better)
Translates to: PHSAHRYSRMLS*TRMCSFSMSFL
Trigger: CAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCATGACAACATCCGGGAGTACCTGTGCGCCGAGTGTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGGGGGTaGCCAGTTTGTATTCTGTCACGAGGACCTCTACTG +
Preference number: 3 (lower is better)
Translates to: GFVPAMFPQSWG*PVCILSRGPLL
Trigger: CAGTAGAGGTCCTCGTGACAGAATACAAACTGGCCACCCCCAGCTCTGAGGGAACATGGCTGGCACAAACCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp GCTGGACAATGCCGATGGAAGATGCATCGATGGTGGTaGTCTCGGGGAGGTGGTCCAGATCGTCAATCCGAA +
Preference number: 3 (lower is better)
Translates to: AGQCRWKMHRWW*SRGGGPDRQSE
Trigger: TTCGGATTGACGATCTGGACCACCTCCCCGAGACCACCACCATCGATGCATCTTCCATCGGCATTGTCCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGGAGCCCAGTGCTCATTaGGGCTCAGCTCATTCATCT +
Preference number: 3 (lower is better)
Translates to: PVTMGIARVCASHVPSELEPSAH*GSAHSS
Trigger: AGATGAATGAGCTGAGCCCAAATGAGCACTGGGCTC...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGGTCACCACCACCTGTaGGATACTCTGTACAGCAGA +
Preference number: 3 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAGHHHL*DTLYSR
Trigger: TCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTACATCATTTTGCCGGTaGTGCAACATGGCGGAGCCA +
Preference number: 3 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPATSFCR*CNMAEP
Trigger: TGGCTCCGCCATGTTGCACAACCGGCAAAATGATGT...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 72 bp AGTCCAAGAACTCCCAGCATGCCATCTGCCAAGAGGTaGGACCTGTGTGGATGTGGAAAGGGTGTGGGTCAG +
Preference number: 3 (lower is better)
Translates to: SPRTPSMPSAKR*DLCGCGKGVGQ
Trigger: CTGACCCACACCCTTTCCACATCCACACAGGTCTCACCTCTTGGCAGATGGCATGCTGGGAGTTCTTGGACT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp CAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTaGTGGACTATGGACCCTATGATGGCAGCCTGGCCT +
Preference number: 3 (lower is better)
Translates to: QTLSSPCLFMSL*WTMDPMMAAWP
Trigger: AGGCCAGGCTGCCATCATAGGGTCCATAGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp GTGGCTTCTGGCTGTGGGTGGATCTGGACATCATTTTaGCGGTTGTGCAACATGGCGGAGCCACTGACAGTA +
Preference number: 3 (lower is better)
Translates to: VASGCGWIWTSF*RLCNMAEPLTV
Trigger: TACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGAAGCCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GACCTCAGAACCCCACTGCTGCAGCTCAGCCTATTCTaGAGCCACAGATCAGTAGCTGTACATCTGCTGCTG +
Preference number: 3 (lower is better)
Translates to: DLRTPLLQLSLF*SHRSVAVHLLL
Trigger: CAGCAGCAGATGTACAGCTACTGATCTGTGGCTGCAGAATAGGCTGAGCTGCAGCAGTGGGGTTCTGAGGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATaGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCA +
Preference number: 3 (lower is better)
Translates to: WSGQAATPWENT*QKLLLAKAIPP
Trigger: TGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp AGGGTGACACTGTGGTCTGGCCAGGCTGCAACACCTTaGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAA +
Preference number: 3 (lower is better)
Translates to: RVTLWSGQAATP*ENTWQKLLLAK
Trigger: TTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGTCACCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp ACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTaGACTATGGACCCTATGATGGCAGCCTGGCCTGTT +
Preference number: 3 (lower is better)
Translates to: TLSSPCLFMSLC*TMDPMMAAWPV
Trigger: AACAGGCCAGGCTGCCATCATAGGGTCCATAGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp ACAGAAGCTCCAGCCTCATCCTCAAAGCTCGCTCTCTaGAAGGAGGTGCCGAGTAGCAGCATCATGTCTGAC +
Preference number: 3 (lower is better)
Translates to: TEAPASSSKLAL*KEVPSSSIMSD
Trigger: GTCAGACATGATGCTGCTACTCGGCACCTCCTTCCAGAGAGCGAGCTTTGAGGATGAGGCTGGAGCTTCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCCAGGCTGCAACACCTaGGGAAAACACATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPPGCNT*GKHMAE
Trigger: TTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAGTTTGCTTCTGTGTGTaGCCACAGAAGGCTAGCCAT +
Preference number: 3 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAVCFCV*PQKASH
Trigger: ATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTAGGAGAAACCTGCGTTaGCTTCTGTGTGTTGCCACA +
Preference number: 3 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPARRNLR*LLCVAT
Trigger: TGTGGCAACACACAGAAGCAAACGCAGGTTTCTCCT...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTATGTACTTCTGCACGTaGGGGTCAGGCAGGTTCTCC +
Preference number: 3 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTMYFCT*GSGRFS
Trigger: GGAGAACCTGCCTGACCCCAACGTGCAGAAGTACAT...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp ATGTGGAAAGGGTGTGGGTCAGGCGACCCACAGACCTaGAGACTTGTCCTCAAGTGCCATCTCTTCCTTATG +
Preference number: 3 (lower is better)
Translates to: MWKGCGSGDPQT*RLVLKCHLFLM
Trigger: CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGACCCACACCCTTTCCACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp TCGCAGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTaGTTGTTCATGTTGCTCCGACAGGAGAACACCTTG +
Preference number: 3 (lower is better)
Translates to: SQVYFLSPWVSR*LFMLLRQENTL
Trigger: CAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp ATGCCTTTGTGCAGCTTCATATGGTGGCGCAGTGCATaGTTGGTCTTCATACCTTTCCCACACTCGGCGCAC +
Preference number: 3 (lower is better)
Translates to: MPLCSFIWWRSA*LVFIPFPHSAH
Trigger: GTGCGCCGAGTGTGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATATGAAGCTGCACAAAGGCAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GGCTGTGGGTGGATCTGGACATCATTTTGCCGGTTGTaGAACATGGCGGAGCCACTGACAGTATCAAAGGTC +
Preference number: 3 (lower is better)
Translates to: GCGWIWTSFCRL*NMAEPLTVSKV
Trigger: GACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTaGCCTCACACAAGGCATCTGTGCACAACTGGACAG +
Preference number: 3 (lower is better)
Translates to: SSVRAHFAHNCV*PHTRHLCTTGQ
Trigger: CTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp TCCATTAGCGCGATGTCCTTGAAGTGGACATGGATGTaGTCCCTGAGTACGTCCACTCGGAAGAACTTGCGC +
Preference number: 3 (lower is better)
Translates to: SISAMSLKWTWM*SLSTSTRKNLR
Trigger: GCGCAAGTTCTTCCGAGTGGACGTACTCAGGGACCACATCCATGTCCACTTCAAGGACATCGCGCTAATGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GCATATGTCTGCTCATGGAGGCCCGGGTTGACACTTTaGTGCCACATAGTTGGCAACTCTGTGCTTCCACCT +
Preference number: 3 (lower is better)
Translates to: AYVCSWRPGLTL*CHIVGNSVLPP
Trigger: AGGTGGAAGCACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GTCACATTGGGGTCCCCTAGGGTCACCACCACCTGTTaGATACTCTGTACAGCAGAATTTGTCTCGTCACCC +
Preference number: 3 (lower is better)
Translates to: VTLGSPRVTTTC*ILCTAEFVSSP
Trigger: GGGTGACGAGACAAATTCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACCCTAGGGGACCCCAATGTGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TGGTTAGACCAACTGAGCTTGATGGAGCAGTCACATTaGGGTCCCCTAGGGTCACCACCACCTGTTGGATAC +
Preference number: 3 (lower is better)
Translates to: WLDQLSLMEQSH*GPLGSPPPVGY
Trigger: GTATCCAACAGGTGGTGGTGACCCTAGGGGACCCCAATGTGACTGCTCCATCAAGCTCAGTTGGTCTAACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGGATCTGGACATCATTTaGCCGGTTGTGCAACATGGC +
Preference number: 3 (lower is better)
Translates to: SSRGASGFKREGSLCTQLDLDII*PVVQHG
Trigger: GCCATGTTGCACAACCGGCAAAATGATGTCCAGATC...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 72 bp AGATGTCCAACAGCCACTGGCTGTAAATTGGTAAACTaGGTTCCAGCTGCAGTGGTGATGGGGGTCACGGTG +
Preference number: 3 (lower is better)
Translates to: RCPTATGCKLVN*VPAAVVMGVTV
Trigger: CACCGTGACCCCCATCACCACTGCAGCTGGAACTCAGTTTACCAATTTACAGCCAGTGGCTGTTGGACATCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp GGTGCTTGTTCATGTTGCTCCGACAGGAGAACACCTTaGCACACACTGGGCATCCAGAAGGTTCCTTCTTGT +
Preference number: 3 (lower is better)
Translates to: GACSCCSDRRTP*HTLGIQKVPSC
Trigger: ACAAGAAGGAACCTTCTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CACAGGTACTCCCGGATGTTGTCATGCACACGCATGTaGTCTTTCAGCATGTCCTTCCTGGCAAAGGACTTC +
Preference number: 3 (lower is better)
Translates to: HRYSRMLSCTRM*SFSMSFLAKDF
Trigger: GAAGTCCTTTGCCAGGAAGGACATGCTGAAAGAGCACATGCGTGTGCATGACAACATCCGGGAGTACCTGTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp TATGTCTGCTCATGGAGGCCCGGGTTGACACTTTGGTaGCACATAGTTGGCAACTCTGTGCTTCCACCTTGT +
Preference number: 3 (lower is better)
Translates to: YVCSWRPGLTLW*HIVGNSVLPPC
Trigger: ACAAGGTGGAAGCACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp GAGGAGATCCCAATTTTGCCAATGAACTCCTCCCGCTaGTGGTCATCCATTAGCGCGATGTCCTTGAAGTGG +
Preference number: 3 (lower is better)
Translates to: EEIPILPMNSSR*WSSISAMSLKW
Trigger: CCACTTCAAGGACATCGCGCTAATGGATGACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTGCAAACTCTTCCTGTTaGGTATCCAGCAAACACCTC +
Preference number: 3 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPANSSC*VSSKHL
Trigger: GAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGC...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCCCAGGCTGCAACACCTaGGGAAAACACATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTPGCNT*GKHMAE
Trigger: TTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGG...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAGATGGCTGCCCATATTaGAATACTTCCAGGAAACAC +
Preference number: 3 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAADGCPY*NTSRKH
Trigger: GTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATC...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 72 bp GTAACTATGGTGAGACAACCTGCTTGCTTCAGCCAATaGCTGGGGAGACCATGTGTCACAGACACTTGGGGA +
Preference number: 3 (lower is better)
Translates to: VTMVRQPACFSQ*LGRPCVTDTWG
Trigger: TCCCCAAGTGTCTGTGACACATGGTCTCCCCAGTCATTGGCTGAAGCAAGCAGGTTGTCTCACCATAGTTAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 72 bp GTTTACCAGTGTGGTAAGGTTGATAAAGTGGGCCACTaGCTGAGGGTTTGTGGCTTCTGGCTGTGGGTGGAT +
Preference number: 3 (lower is better)
Translates to: VYQCGKVDKVGH*LRVCGFWLWVD
Trigger: ATCCACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGGCCCACTTTATCAACCTTACCACACTGGTAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATaGTCCATCTGTGTAACAGAAGCTCCAGCCTCATCC +
Preference number: 3 (lower is better)
Translates to: PADLSSSAISSL*SICVTEAPASS
Trigger: GGATGAGGCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGG
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp GAGATCCCAATTTTGCCAATGAACTCCTCCCGCTGGTaGTCATCCATTAGCGCGATGTCCTTGAAGTGGACA +
Preference number: 3 (lower is better)
Translates to: EIPILPMNSSRW*SSISAMSLKWT
Trigger: TGTCCACTTCAAGGACATCGCGCTAATGGATGACCACCAGCGGGAGGAGTTCATTGGCAAAATTGGGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGGTTTGCTTCTGTGTGTaGCCACAGAAGGCTAGCCAT +
Preference number: 3 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMVCFCV*PQKASH
Trigger: ATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GAGCTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCCTCTTGCAGCTGTACTaGTGTGGCTCAGAGTCTGCG +
Preference number: 3 (lower is better)
Translates to: ELVCLHCVPLTECLPTQFLLQLY*CGSESA
Trigger: CGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAG...GAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCGGCTTCTGCTTTCTCTaGTGGCTGCGCTTGGCAGCC +
Preference number: 3 (lower is better)
Translates to: GERLVLSEFLLITAGSRCGFCFL*WLRLAA
Trigger: GGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAAGCC...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTACCACTGACTGAGGGTTaGTGGCTTCTGGCTGTGGGT +
Preference number: 3 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVPLTEG*WLLAVG
Trigger: ACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGG...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 72 bp AGCTGCACCATAATACATGTTTGGATGGCAGAGTCCTaGGATAGCTCCAGAGGAGCATCGGGATTCAAGCGT +
Preference number: 3 (lower is better)
Translates to: SCTIIHVWMAES*DSSRGASGFKR
Trigger: ACGCTTGAATCCCGATGCTCCTCTGGAGCTATCTCAGGACTCTGCCATCCAAACATGTATTATGGTGCAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp CATCTGGTACAGACCCTTTTCCTGAGAACTTATCACTaGCTAACACCATCCCAGAGGGTGGAATCCTGTGCT +
Preference number: 3 (lower is better)
Translates to: HLVQTLFLRTYH*LTPSQRVESCA
Trigger: AGCACAGGATTCCACCCTCTGGGATGGTGTTAGCCAGTGATAAGTTCTCAGGAAAAGGGTCTGTACCAGATG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCAACTCTGTCCTCACCTaGCCTCTTCATGTCCCTGTG +
Preference number: 3 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFNSVLT*PLHVPV
Trigger: CACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTT...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCGACAGGAGAACACCTaGCCACACACTGGGCATCCA +
Preference number: 3 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFRQENT*PHTGHP
Trigger: TGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGGCGCTCTCATCAGAGTaGTCATCATTCTCCTCTGAG +
Preference number: 3 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKALSSE*SSFSSE
Trigger: CTCAGAGGAGAATGATGACAACTCTGATGAGAGCGC...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 72 bp CATCATTTTGCCGGTTGTGCAACATGGCGGAGCCACTaGCAGTATCAAAGGTCACAGTCAGGATGGAGTTAT +
Preference number: 3 (lower is better)
Translates to: HHFAGCATWRSH*QYQRSQSGWSY
Trigger: ATAACTCCATCCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR GCA 72 bp CTGGAGTGTAGAGGTGCCTTTGTTTTGCTATCCAGTTaGTATCTGCAGGGGAGCTGTAACTATGGTGAGACA +
Preference number: 3 (lower is better)
Translates to: LECRGAFVLLSS*YLQGSCNYGET
Trigger: TGTCTCACCATAGTTACAGCTCCCCTGCAGATAGCAACTGGATAGCAAAACAAAGGCACCTCTACACTCCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp GTGCCGTTTGTAGTGCTTGAGCATGTTGACCTTCTGTaGAAACTTGCGGTGACATTCCTTGCACTCATACTC +
Preference number: 3 (lower is better)
Translates to: VPFVVLEHVDLL*KLAVTFLALIL
Trigger: GAGTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACAGAAGGTCAACATGCTCAAGCACTACAAACGGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp TCATACTCCTTGATGCCTTTGTGCAGCTTCATATGGTaGCGCAGTGCATGCTTGGTCTTCATACCTTTCCCA +
Preference number: 3 (lower is better)
Translates to: SYSLMPLCSFIW*RSACLVFIPFP
Trigger: TGGGAAAGGTATGAAGACCAAGCATGCACTGCGCCACCATATGAAGCTGCACAAAGGCATCAAGGAGTATGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTCTAATCTCAGTGATCTaGACATTTGCAAACTCTTCC +
Preference number: 3 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTLISVI*TFANSS
Trigger: GGAAGAGTTTGCAAATGTCAAGATCACTGAGATTAG...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCGAGCCCAGTGCTCATTaGGGCTCAGCTCATTCATCT +
Preference number: 3 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIEPSAH*GSAHSS
Trigger: AGATGAATGAGCTGAGCCCAAATGAGCACTGGGCTC...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR-3UTR CAA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGGAACAAGTCCACTGCTaGCCTACTGTGTGGATGAGC +
Preference number: 3 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVEQVHC*PTVWMS
Trigger: GCTCATCCACACAGTAGGCAAGCAGTGGACTTGTTC...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGCAAACTCTTCCTGTTaGGTATCCAGCAAACACCTC +
Preference number: 3 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFANSSC*VSSKHL
Trigger: GAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCCAGGCTGCAACACCTaGGGAAAACACATGGCAGAA +
Preference number: 3 (lower is better)
Translates to: GERLVLSEFLLITAGSRCPGCNT*GKHMAE
Trigger: TTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCACAGTTTGCTTCTGTGTGTaGCCACAGAAGGCTAGCCAT +
Preference number: 3 (lower is better)
Translates to: LVCLHCVPLTECLPTQFTVCFCV*PQKASH
Trigger: ATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC...TGTGAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR TCA 72 bp GTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTaGATACTTCCAGGAAACACAGGACCAAGGACGAAG +
Preference number: 3 (lower is better)
Translates to: VSIHLCRMAAHI*ILPGNTGPRTK
Trigger: CTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp AACCTCAGAATCTATGGTAGTCACAGGCACTGCTTCTaGCTTTGGATACTGACTGAGAATGGTGTGAAGGAG +
Preference number: 3 (lower is better)
Translates to: NLRIYGSHRHCF*LWILTENGVKE
Trigger: CTCCTTCACACCATTCTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTGACTACCATAGATTCTGAGGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR GCA 72 bp TCCACAAACCTCAGAATCTATGGTAGTCACAGGCACTaGTTCTGCCTTTGGATACTGACTGAGAATGGTGTG +
Preference number: 3 (lower is better)
Translates to: STNLRIYGSHRH*FCLWILTENGV
Trigger: CACACCATTCTCAGTCAGTATCCAAAGGCAGAAGCAGTGCCTGTGACTACCATAGATTCTGAGGTTTGTGGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CCA 72 bp CAGGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTaGCAGCAGGAGAGACTGTACAACCTAAGCTCCGTC +
Preference number: 3 (lower is better)
Translates to: QEVDASVYLSKQ*QQERLYNLSSV
Trigger: GACGGAGCTTAGGTTGTACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAAGGAGAAACCTGCGTTaGCTTCTGTGTGTTGCCACA +
Preference number: 3 (lower is better)
Translates to: WGERLVLSEFLLITAGSRRRNLR*LLCVAT
Trigger: TGTGGCAACACACAGAAGCAAACGCAGGTTTCTCCT...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR GCA 72 bp AGGAGCAAGGAGAAACCTGCGTTTGCTTCTGTGTGTTaGCACAGAAGGCTAGCCATATTTCAGTTATTGTCA +
Preference number: 3 (lower is better)
Translates to: RSKEKPAFASVC*HRRLAIFQLLS
Trigger: TGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp AAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTaGCTAAGCTGCACCATAATACATGTTTGGATGGCA +
Preference number: 3 (lower is better)
Translates to: KHGSLPILHSGM*LSCTIIHVWMA
Trigger: TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGCAAACTCTTCCTGTTaGGTATCCAGCAAACACCTC +
Preference number: 3 (lower is better)
Translates to: TDTWGERLVLSEFLLITAANSSC*VSSKHL
Trigger: GAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGGATGGCTGCCCATATTaGAATACTTCCAGGAAACAC +
Preference number: 3 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVDGCPY*NTSRKH
Trigger: GTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATC...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTACTCCTTGATGCCTTaGTGCAGCTTCATATGGTGG +
Preference number: 3 (lower is better)
Translates to: YFQETQDQGRSKASSSLSYSLMP*CSFIWW
Trigger: CCACCATATGAAGCTGCACAAAGGCATCAAGGAGTA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CCA 72 bp CTACGGATCAACAATGGTTTATGTATGTGGGGTACCTaGAGTGTAGAGGTGCCTTTGTTTTGCTATCCAGTT +
Preference number: 3 (lower is better)
Translates to: LRINNGLCMWGT*SVEVPLFCYPV
Trigger: AACTGGATAGCAAAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 72 bp GAAGAGAATAAAAGTCAAATGCTAGTGATGTTTGATTaGGCCCAGTGCTCATTTGGGCTCAGCTCATTCATC +
Preference number: 3 (lower is better)
Translates to: EENKSQMLVMFD*AQCSFGLSSFI
Trigger: GATGAATGAGCTGAGCCCAAATGAGCACTGGGCTCAATCAAACATCACTAGCATTTGACTTTTATTCTCTTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCTAATCTCAGTGATCTaGACATTTGCAAACTCTTCC +
Preference number: 3 (lower is better)
Translates to: GERLVLSEFLLITAGSRCLISVI*TFANSS
Trigger: GGAAGAGTTTGCAAATGTCAAGATCACTGAGATTAG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGATCAGCTCATTCATCTTaGAGAGGCTATAAAGGCAAA +
Preference number: 3 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRSAHSS*RGYKGK
Trigger: TTTGCCTTTATAGCCTCTCAAAGATGAATGAGCTGA...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR TCA 72 bp GCACCTTTATTTATCACCATACAAACAGATGTGACATaGAACACCCTCAGAGTTACAGAATGGTCTCCACAA +
Preference number: 3 (lower is better)
Translates to: APLFITIQTDVT*NTLRVTEWSPQ
Trigger: TTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACATCTGTTTGTATGGTGATAAATAAAGGTGC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR TCA 72 bp TCACAGCACCTTTATTTATCACCATACAAACAGATGTaGCATGAAACACCCTCAGAGTTACAGAATGGTCTC +
Preference number: 3 (lower is better)
Translates to: SQHLYLSPYKQM*HETPSELQNGL
Trigger: GAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACATCTGTTTGTATGGTGATAAATAAAGGTGCTGTGA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR GCA 72 bp TTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATaGCTCTGTATATTTAAGCAAACAGTGGCAGCAGGA +
Preference number: 3 (lower is better)
Translates to: LSEFLLITAGSR*LCIFKQTVAAG
Trigger: TCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CCA 72 bp TCCTACAGAGCTGAACCTCTGTATTTCATAGGAAATTaGTTTTCAGACATAACCACCTTTGGAATTAAGGCT +
Preference number: 3 (lower is better)
Translates to: SYRAEPLYFIGN*FSDITTFGIKA
Trigger: AGCCTTAATTCCAAAGGTGGTTATGTCTGAAAACCAATTTCCTATGAAATACAGAGGTTCAGCTCTGTAGGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTTGTGCACCTCCATGATGTGCCCGTGCGAGCGCACGTaGCGGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: RWQMLQPWPFSLCTSMMCPCERT*RLRLLL
Trigger: CAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGG...GCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp GGCAGCCTGGCCTGTTACCATGGGGATAGCACGGGTTaGTGCCAGCCATGTTCCCTCAGAGCTGGGGGTGGC +
Preference number: 4 (lower is better)
Translates to: GSLACYHGDSTG*CQPCSLRAGGG
Trigger: GCCACCCCCAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAGGCTGCC
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGATGCGCGCACTCACCGTaGGAGCGCACGTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRCAHSP*ERTCRL
Trigger: GAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCA...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCGGTTGCACCGCCTGCTaGGGGGCTGCAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTGCTAC*GAAGAC
Trigger: ACAGGCCCCTGCAGCCCCGCAGCAGGCGGTGCAACC...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGCCGTGCGAGCGCACGTaGCGGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: PVTMGIARVCASHVPSELPCERT*RLRLLL
Trigger: CAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGG...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGGGTTGCACCGCCTGCTaGGGGGCTGCAGGGGCCTGT +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRGCTAC*GAAGAC
Trigger: ACAGGCCCCTGCAGCCCCGCAGCAGGCGGTGCAACC...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGCACGCAGGCTCCACCTaGCCCCCACCTGTCCACCCT +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLHAGST*PPPVHP
Trigger: AGGGTGGACAGGTGGGGGCCAGGTGGAGCCTGCGTG...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000095849.10
CDS-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACACTGGGCTCAGGGGTaGCTGCAGCCTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAHWAQG*LQPEHW
Trigger: CCAGTGTTCAGGCTGCAGGCACCCCTGAGCCCAGTG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGAAGCTGCCTCATGCTaGTGGCCACCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLREAASC*WPPAGR
Trigger: CCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTC...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTGGGGCCTGTGGCGGCTaGAGCACATCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTGACGG*STSVWG
Trigger: GCCCCAGACAGATGTGCTGCAGCCGCCACAGGCCCC...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTTCTGTACCTGGGGTTaGACCGCCTGCTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAFCTWG*TACCGA
Trigger: AGCCCCGCAGCAGGCGGTGCAACCCCAGGTACAGAA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGCCTCATGCTGCTaGCCACCTGCAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRAASCC*PPAGRL
Trigger: AAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGC...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCAGTGCGAAGCGTCGGTaGCAGATGCTGCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTSAKRR*QMLQPW
Trigger: CCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp AGATCGTCAATCCGAACAGCGAGGACCTCGGGGTGCTaGCGTCGCATATGTCTGCTCATGGAGGCCCGGGTT +
Preference number: 4 (lower is better)
Translates to: RSSIRTARTSGC*RRICLLMEARV
Trigger: AACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGCACCCCGAGGTCCTCGCTGTTCGGATTGACGATCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGGGGAGGGAGGACCTTaGCCTGCTCAGCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAGEGGP*PAQHKG
Trigger: TCCTTTGTGCTGAGCAGGGCAAGGTCCTCCCTCCCC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCACACTGGGCTCAGGGGTaGCTGCAGCCTGAACACTGG +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASHWAQG*LQPEHW
Trigger: CCAGTGTTCAGGCTGCAGGCACCCCTGAGCCCAGTG...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TATTCACTGAAGGTGGTATCCTCAGGCACTGGAGCCCCTGCCTCTTCCTCTGGCGCTCTTGCTCTCGGCTaGTGTGGGAGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: YSLKVVSSGTGAPASSSGALALG*CGRLHP
Trigger: AGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGC...GCCAGAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACCACCTTCAGTGAATA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGGTCGGTGGCAGATGCTaGAGCCGTGGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLVGGRC*SRGPSP
Trigger: AGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGAC...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCGTCGGTGGCAGATGCTaGAGCCGTGGCCCTTCTCCT +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLVGGRC*SRGPSP
Trigger: AGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGAC...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCATCTGCCAGTTCTTCCTaGTCCAGGCCCAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASSASSS*SRPSAG
Trigger: GCCTGCGCTGGGCCTGGAGCAGGAAGAACTGGCAGA...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTCTGCCAGTTCTTCCTaGTCCAGGCCCAGCGCAGGC +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPSASSS*SRPSAG
Trigger: GCCTGCGCTGGGCCTGGAGCAGGAAGAACTGGCAGA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGGGGGCCTGTGGCGGCTaGAGCACATCTGTCTGGGGC +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPGACGG*STSVWG
Trigger: GCCCCAGACAGATGTGCTGCAGCCGCCACAGGCCCC...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGGCTGCCTCATGCTGCTaGCCACCTGCAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLAASCC*PPAGRL
Trigger: AAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGC...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAAGCTGGCTTCATTTGTaGGGGCGGCCAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAASWLHL*GRPASP
Trigger: TGGGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCT...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCTGCAGCACATCTGTCTaGGGCACTGCTCGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTCSTSV*GTARQV
Trigger: CACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCA...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCGGGGTGCCTGCAGCCTaGACACTGGAGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSGVPAA*TLEQAC
Trigger: GCAGGCCTGCTCCAGTGTTCAGGCTGCAGGCACCCC...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCGCTGTCAGGTTCTGGTaGCCAGGCTCCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLAVRFW*PGSSAG
Trigger: ACCAGCACTGGAGCCTGGGCACCAGAACCTGACAGC...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACCACTCGGAAGAACTTaGGCCCACAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAPLGRT*AHRSRR
Trigger: CCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGAGGCACTGGAGCCCCTaGCTCTTCCTCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLRHWSP*LFLWLL
Trigger: CAGAAGCCAGAGGAAGAGGCAGGGGCTCCAGTGCCT...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTCAGGTGAGTGGGTGCTaGTCACTGAGTTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAQVSGC*SLSWFP
Trigger: GGGGAACCAACTCAGTGAGCAGCACCCACTCACCTG...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGACATAGGAGAGGGCATCTGTCTGGGGCACTaGTCGCCAGGTGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: AFHETILQQAFMPDIGEGICLGH*SPGEWV
Trigger: CACCCACTCACCTGGCGAGCAGTGCCCCAGACAGAT...GCCCTCTCCTATGTCGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAAGCTGGCTTCATTTGTaGGGGCGGCCAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASSWLHL*GRPASP
Trigger: TGGGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCT...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp GCCAGCCATGTTCCCTCAGAGCTGGGGGTGGCCAGTTaGTATTCTGTCACGAGGACCTCTACTGCTCTCACC +
Preference number: 4 (lower is better)
Translates to: ASHVPSELGVAS*YSVTRTSTALT
Trigger: GGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTGGCCACCCCCAGCTCTGAGGGAACATGGCTGGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp CGTCGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTaGTGCACCTCCATGATGTGCTTCAGGTATTCCTTC +
Preference number: 4 (lower is better)
Translates to: RRWQMLQPWPFS*CTSMMCFRYSF
Trigger: GAAGGAATACCTGAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTGGGGAGGGAGGACCTTaGCCTGCTCAGCACAAAGGA +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTGEGGP*PAQHKG
Trigger: TCCTTTGTGCTGAGCAGGGCAAGGTCCTCCCTCCCC...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGTCAGAAGCTGCCTCATaGTGCTGGCCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRSEAAS*CWPPAG
Trigger: CCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGA...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASAGSGC*CSGRPC
Trigger: GCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTAGGCACTGGAGCCCCTaGCTCTTCCTCTGGCTTCTG +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTRHWSP*LFLWLL
Trigger: CAGAAGCCAGAGGAAGAGGCAGGGGCTCCAGTGCCT...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCACAGGTGAGTGGGTGCTaGTCACTGAGTTGGTTCCCC +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASQVSGC*SLSWFP
Trigger: GGGGAACCAACTCAGTGAGCAGCACCCACTCACCTG...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGCAGGTGCTTGTTCATGTTGCTCCGACAGGAGAACACCTTGCCACACACTGGGCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: SRCLFMLLRQENTLPHTGLQGGF*LAPDGP
Trigger: TGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAG...CCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCATGCATCGATGGTGGTaGTCTCGGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLMHRWW*SRGGGP
Trigger: TGGACCACCTCCCCGAGACCACCACCATCGATGCAT...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAAGGGTTTGTGGCTTCTaGCTGTGGGTGGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAARVCGF*LWVDLD
Trigger: GTCCAGATCCACCCACAGCCAGAAGCCACAAACCCT...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTCTGACTGAGGGTTTGTaGCTTCTGGCTGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPALTEGL*LLAVGG
Trigger: TCCACCCACAGCCAGAAGCCACAAACCCTCAGTCAG...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCCTGACTGAGGGTTTGTaGCTTCTGGCTGTGGGTGGA +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTLTEGL*LLAVGG
Trigger: TCCACCCACAGCCAGAAGCCACAAACCCTCAGTCAG...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGATAAAGTGGGCCACTaGCTGAGGGTTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPADKVGH*LRVCGF
Trigger: GAAGCCACAAACCCTCAGTCAGTGGCCCACTTTATC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TCCATGATGTGCTTCAGGTATTCCTTCCCACGGCCGAAAGTGAGCTGGCACCTCACACTGGAGCAGGCCTaGTTTAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: SMMCFRYSFPRPKVSWHLTLEQA*FSMGLS
Trigger: GGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGT...GAGGTGCCAGCTCACTTTCGGCCGTGGGAAGGAATACCTGAAGCACATCATGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGATGCTGCTGGCCACCTaGAGGGAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRMLLAT*REAFGL
Trigger: CAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCAT...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCGAAGCTGCCTCATGCTaGTGGCCACCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSEAASC*WPPAGR
Trigger: CCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTC...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: GKTHGRSSCLPKPYHQQSAGSGC*CSGRPC
Trigger: GCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGC...GCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGCGTGCCGGCTCAGGTTaGTGCTGTTCTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMRAGSG*CCSGRP
Trigger: AGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACG...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCCGTGGGTCAGCAGGTaGTTGTTCATGTTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPPWVSR*LFMLLR
Trigger: TCGGAGCAACATGAACAAGCACCTGCTGACCCACGG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGGTGTGGCTCAGAGTCTaGGCTCTCATCAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: PVTMGIARVCASHVPSELVWLRV*ALIRVV
Trigger: GACAACTCTGATGAGAGCGCAGACTCTGAGCCACAC...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCTGGCCCTTCTCCTTGTaGACCTCCATGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTWPFSL*TSMMCF
Trigger: GAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCA...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGTGCGTCGCATATGTCTaGTCATGGAGGCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRCVAYV*SWRPGL
Trigger: CAACCCGGGCCTCCATGAGCAGACATATGCGACGCA...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCGGACCTCGGGGTGCTTaGGTCGCATATGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: GKTHGRSSCLPKPYHQQSGPRGA*VAYVCS
Trigger: TGAGCAGACATATGCGACGCAAGCACCCCGAGGTCC...GCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGTTCTGTACCTGGGGTTaGACCGCCTGCTGCGGGGCT +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMFCTWG*TACCGA
Trigger: AGCCCCGCAGCAGGCGGTGCAACCCCAGGTACAGAA...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGTCCGAGTCATGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: PVTMGIARVCASHVPSELSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGA...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCTGCAGCCTGAACACTaGAGCAGGCCTGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPLQPEH*SRPALA
Trigger: TGCTAAAGCAGGCCTGCTCCAGTGTTCAGGCTGCAG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGCTCCAGGAAGGTGTTaGAGCACACCTTACACACCC +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASAPGRC*STPYTP
Trigger: GGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATTGGCTTGCTCCAGATaGCCCAAGAGATGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAALACSR*PKRCSF
Trigger: GAACGAGCATCTCTTGGGCCATCTGGAGCAAGCCAA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRLQGGF*LAPDGP
Trigger: TGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAG...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCA +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMLQGGF*LAPDGP
Trigger: TGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAG...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCAGGTTGCTGCTGTTCTaGAAGACCTTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTRLLLF*KTLLQV
Trigger: CACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCT...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGACACCTTGCCACACACTaGGCATCCAGAAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRHLATH*ASRRFL
Trigger: AAGGAACCTTCTGGATGCCCAGTGTGTGGCAAGGTG...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCATGAACTCCTCCCGCTaGTGGTCATCCATTAGCGCG +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLMNSSR*WSSISA
Trigger: CGCGCTAATGGATGACCACCAGCGGGAGGAGTTCAT...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTATGCATCGATGGTGGTaGTCTCGGGGAGGTGGTCCA +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTMHRWW*SRGGGP
Trigger: TGGACCACCTCCCCGAGACCACCACCATCGATGCAT...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCATGGAAGATGCATCGATaGTGGTGGTCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASWKMHR*WWSRGG
Trigger: ACCTCCCCGAGACCACCACCATCGATGCATCTTCCA...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGGAAGATGCATCGATaGTGGTGGTCTCGGGGAGGT +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLWKMHR*WWSRGG
Trigger: ACCTCCCCGAGACCACCACCATCGATGCATCTTCCA...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGTGCAGCACATCTGTCTaGGGCACTGCTCGCCAGGTG +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPCSTSV*GTARQV
Trigger: CACCTGGCGAGCAGTGCCCCAGACAGATGTGCTGCA...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAGATGCTCCTGAACACTaGAGCAGGCCTGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAADAPEH*SRPALA
Trigger: TGCTAAAGCAGGCCTGCTCCAGTGTTCAGGAGCATC...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp AAGGGTGTGGGTCAGGCGACCCACAGACCTGCAGACTaGTCCTCAAGTGCCATCTCTTCCTTATGCTCCATC +
Preference number: 4 (lower is better)
Translates to: KGVGQATHRPAD*SSSAISSLCSI
Trigger: GATGGAGCATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGACCCACACCCTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp TTCTTGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTaGCTCCGACAGGAGAACACCTTGCCACACACTGGG +
Preference number: 4 (lower is better)
Translates to: FLSPWVSRCLFM*LRQENTLPHTG
Trigger: CCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp CGCATATGTCTGCTCATGGAGGCCCGGGTTGACACTTaGGTGCCACATAGTTGGCAACTCTGTGCTTCCACC +
Preference number: 4 (lower is better)
Translates to: RICLLMEARVDT*VPHSWQLCAST
Trigger: GGTGGAAGCACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp GCTTGCGTCGCATATGTCTGCTCATGGAGGCCCGGGTaGACACTTTGGTGCCACATAGTTGGCAACTCTGTG +
Preference number: 4 (lower is better)
Translates to: ACVAYVCSWRPG*TLWCHIVGNSV
Trigger: CACAGAGTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGAGCAGACATATGCGACGCAAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp TGTGGCTTCTGGCTGTGGGTGGATCTGGACATCATTTaGCCGGTTGTGCAACATGGCGGAGCCACTGACAGT +
Preference number: 4 (lower is better)
Translates to: CGFWLWVDLDII*PVVQHGGATDS
Trigger: ACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGAAGCCACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp TATTCACTGAAGGTGGTATCCTCAGGCACTGGAGCCCCTGCCTCTTCCTCTGGCCTCTGCCACATGCTCTaGAGGCTCCTTGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: YSLKVVSSGTGAPASSSGLCHML*RLLVFD
Trigger: ATCAAAGACAAGGAGCCTTCAGAGCATGTGGCAGAG...GCCAGAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACCACCTTCAGTGAATA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATTAGCGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAALARCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGCTAA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGATGCCTACTGTGTGGATaGGCTTGTGTGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRCLLCG*ACVSPL
Trigger: CAATGGAGACACACAAGCTCATCCACACAGTAGGCA...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGGCTGTCAGGTTCTGGTaGCCAGGCTCCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMAVRFW*PGSSAG
Trigger: ACCAGCACTGGAGCCTGGGCACCAGAACCTGACAGC...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGACACTGGAGCAGGCCTaGTTTAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRTLEQA*FSMGLS
Trigger: GGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGT...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGGGGAGGCTTTTGGCTTaGTCCAGATGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMGRLLA*SRWPKR
Trigger: TCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCC...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTGCTCTTGCTCTCGGCTaGTGTGGGAGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAALALG*CGRLHP
Trigger: AGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGC...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCCGTTCATCTGGTGTTaGACTCACAGGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPPFIWC*THRLIW
Trigger: CCAGATGAGCCTGTGAGTGCAACACCAGATGAACGG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATGCCACACTGATGGATaGGTTTATGCTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAACHTDG*VYAHPA
Trigger: AGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCGTGTGGCTCAGAGTCTaGGCTCTCATCAGAGTTGTC +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLVWLRV*ALIRVV
Trigger: GACAACTCTGATGAGAGCGCAGACTCTGAGCCACAC...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGTCCTTGATGCCTTTGTaGAGCTTCATATGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: PVTMGIARVCASHVPSELSLMPL*SFIWWR
Trigger: GCGCCACCATATGAAGCTGCACAAAGGCATCAAGGA...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCTCCTTGATGCCTTTGTaGAGCTTCATATGGTGGCGC +
Preference number: 4 (lower is better)
Translates to: LCVASHKASVHNWTGTDTSLMPL*SFIWWR
Trigger: GCGCCACCATATGAAGCTGCACAAAGGCATCAAGGA...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCAAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAARPALA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCT...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAGTTCCACAGAGACACTaGGCTCAGGGGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAVPQRH*AQGCLQ
Trigger: CTGCAGGCACCCCTGAGCCCAGTGTCTCTGTGGAAC...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCGTGACCATGACACTCTaGATGCTCTTGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLVTMTL*MLLLSA
Trigger: AGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCAC...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACAACCTTGGATGCTTTaGGTTTCCTCCCTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAQPWML*VSSLFE
Trigger: CTCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp AGCAGGTGCTTGTTCATGTTGCTCCGACAGGAGAACACCTTGCCACACACTGGGGAGGCTGCTCAACCTTaGATGCTTTGGGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: SRCLFMLLRQENTLPHTGEAAQP*MLWVSS
Trigger: GGAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTC...CCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCAGCTGGCTTCATTTGTaGGGGCGGCCAGCTTCCCCA +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSSWLHL*GRPASP
Trigger: TGGGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCT...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGGCAGCTGTACTTGTGTaGCTCAGAGTCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRAAVLV*LRVCAL
Trigger: GAGAGCGCAGACTCTGAGCCACACAAGTACAGCTGC...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAGGTATCCTCAGGCACTaGAGCCCCTGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAGILRH*SPCLFL
Trigger: GAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACC...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp CTGCAGGGGAGCTGTAACTATGGTGAGACAACCTGCTaGCTTCAGCCAATGACTGGGGAGACCATGTGTCAC +
Preference number: 4 (lower is better)
Translates to: LQGSCNYGETTC*LQPMTGETMCH
Trigger: GTGACACATGGTCTCCCCAGTCATTGGCTGAAGCAAGCAGGTTGTCTCACCATAGTTACAGCTCCCCTGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp CAGGTGTACTTCTTGTCACCGTGGGTCAGCAGGTGCTaGTTCATGTTGCTCCGACAGGAGAACACCTTGCCA +
Preference number: 4 (lower is better)
Translates to: QVYFLSPWVSRC*FMLLRQENTLP
Trigger: TGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp TGGATGTGGTCCCTGAGTACGTCCACTCGGAAGAACTaGCGCCCACAGATCTCGCAGGTGTACTTCTTGTCA +
Preference number: 4 (lower is better)
Translates to: WMWSLSTSTRKN*RPQISQVYFLS
Trigger: TGACAAGAAGTACACCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGACGTACTCAGGGACCACATCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp GTTCCAGCTGCAGTGGTGATGGGGGTCACGGTGATGTaGGTTAGACCAACTGAGCTTGATGGAGCAGTCACA +
Preference number: 4 (lower is better)
Translates to: VPAAVVMGVTVM*VRPTELDGAVT
Trigger: TGTGACTGCTCCATCAAGCTCAGTTGGTCTAACCAACATCACCGTGACCCCCATCACCACTGCAGCTGGAAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGGGTGCCTGCAGCCTaGACACTGGAGCAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRGVPAA*TLEQAC
Trigger: GCAGGCCTGCTCCAGTGTTCAGGCTGCAGGCACCCC...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGTGCTCGTTCAGGAGCTaGAGCTCCAGGAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPCSFRS*SSRKVL
Trigger: CAACACCTTCCTGGAGCTTCAGCTCCTGAACGAGCA...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTGGGGGATCTCAGTTATaGTCTCTGCCACATGCTCTG +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTGGSQL*SLPHAL
Trigger: CAGAGCATGTGGCAGAGATCATAACTGAGATCCCCC...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTTGGGAACTTTGGCACTaGGCTGGCTTCATTTGTGGG +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTWELWH*AGFICG
Trigger: CCCACAAATGAAGCCAGCTCAGTGCCAAAGTTCCCA...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGGAACCAAGCCCCTCTTaGGGGCAATGGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMEPSPS*GQWCCL
Trigger: CAAGCAGCACCATTGCCCTCAAGAGGGGCTTGGTTC...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTGCACTCATACTCCTTaGTGCCTTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPACTHTP*CLCAAS
Trigger: TGAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAGCTGTCAGGTTCTGGTaGCCAGGCTCCAGTGCTGGT +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRAVRFW*PGSSAG
Trigger: ACCAGCACTGGAGCCTGGGCACCAGAACCTGACAGC...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGATCAGAAGCTGCCTCATaGTGCTGGCCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRSEAAS*CWPPAG
Trigger: CCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGA...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGCTCCTTCTCAGAAGCTaGCTCATGCTGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMLLLRS*LMLLAT
Trigger: GGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAG...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGCTCCTTCTCAGAAGCTaGCTCATGCTGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLLLLRS*LMLLAT
Trigger: GGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAG...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCTGCTCAACCTTGGATaGTTTGGGTTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPLLNLG*FGFPPS
Trigger: AGAGGGAGGAAACCCAAAGCATCCAAGGTTGAGCAG...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTGCCACACTGATGGATaGGTTTATGCTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPCHTDG*VYAHPA
Trigger: AGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGACCGTGCGAGCGCACGTaGCGGCTCAGGTTGCTGCTG +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRPCERT*RLRLLL
Trigger: CAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGG...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGCCGTGGGTCAGCAGGTaGTTGTTCATGTTGCTCCGA +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPPWVSR*LFMLLR
Trigger: TCGGAGCAACATGAACAAGCACCTGCTGACCCACGG...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGCCACTCGGAAGAACTTaGGCCCACAGATCTCGCAGG +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLPLGRT*AHRSRR
Trigger: CCTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGG...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGTGGCCCTTCTCCTTGTaGACCTCCATGATGTGCTTC +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRWPFSL*TSMMCF
Trigger: GAAGCACATCATGGAGGTGCACAAGGAGAAGGGCCA...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATTGGCAGCCTTTCCATaGTTACCTTCTGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAALAAFP*LPSASS
Trigger: AGAACTGGCAGAAGGTAAGCATGGAAAGGCTGCCAA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTATCTGGACATCATTTTaGCGGTTGTGCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAIWTSF*RLCNMA
Trigger: CGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATCTGTCTGGGGCACTaGTCGCCAGGTGAGTGGGTG +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWICLGH*SPGEWV
Trigger: CACCCACTCACCTGGCGAGCAGTGCCCCAGACAGAT...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGTCCGAGTCATGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGA...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGGCCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGATGCAGTCATCCTCATTaGAAGTGTCGAAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LACYHGDSTGLCQPCSLRCSHPH*KCRSTQ
Trigger: CTGTGTGCTTCGACACTTCCAATGAGGATGACTGCA...TCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGGCCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: SSRGASGFKREGSLCTQLRPALA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCT...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCGCTCCAGGAAGGTGTTaGAGCACACCTTACACACCC +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTAPGRC*STPYTP
Trigger: GGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGC...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCTGTGGCTTCTGGCTGTaGGTGGATCTGGACATCATT +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLCGFWL*VDLDII
Trigger: AATGATGTCCAGATCCACCCACAGCCAGAAGCCACA...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp AAGAACTTGCGCCCACAGATCTCGCAGGTGTACTTCTaGTCACCGTGGGTCAGCAGGTGCTTGTTCATGTTG +
Preference number: 4 (lower is better)
Translates to: KNLRPQISQVYF*SPWVSRCLFML
Trigger: CAACATGAACAAGCACCTGCTGACCCACGGTGACAAGAAGTACACCTGCGAGATCTGTGGGCGCAAGTTCTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
3UTR CAA 72 bp TCTGGCTGTGGGTGGATCTGGACATCATTTTGCCGGTaGTGCAACATGGCGGAGCCACTGACAGTATCAAAG +
Preference number: 4 (lower is better)
Translates to: SGCGWIWTSFCR*CNMAEPLTVSK
Trigger: CTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCAAAATGATGTCCAGATCCACCCACAGCCAGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGAACCAAGCCCCTCTTaGGGGCAATGGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWEPSPS*GQWCCL
Trigger: CAAGCAGCACCATTGCCCTCAAGAGGGGCTTGGTTC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGCATGGTAGGTGGCCTTaGGTGCGAAGCGTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVHGRWP*VRSVGG
Trigger: GCCACCGACGCTTCGCACTCAAGGCCACCTACCATG...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAACACTGGAGCAGGCCTaGTTTAGCATGGGCTTGTCC +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEATLEQA*FSMGLS
Trigger: GGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGT...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCGGGAGGCTTTTGGCTTaGTCCAGATGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSGRLLA*SRWPKR
Trigger: TCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCC...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAATGCTGCTGGCCACCTaGAGGGAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRMLLAT*REAFGL
Trigger: CAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCAT...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCCGTGCCGGCTCAGGTTaGTGCTGTTCTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPRAGSG*CCSGRP
Trigger: AGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACG...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGACATAGGAGAGGGCTGCACCTCCATGATGTaGTTCAGGTATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: AFHETILQQAFMPDIGEGCTSMM*FRYSFP
Trigger: TGGGAAGGAATACCTGAAGCACATCATGGAGGTGCA...GCCCTCTCCTATGTCGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCTCATGCACACGCATGTaGTCTTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAAGAGCACATGCGTGTGCATGA...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCAAACTGAGTTCCAGCTaGAGTGGTGATGGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTKLSSS*SGDGGH
Trigger: GTGACCCCCATCACCACTGCAGCTGGAACTCAGTTT...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCATCTGGACATCATTTTaGCGGTTGTGCAACATGGCG +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLIWTSF*RLCNMA
Trigger: CGCCATGTTGCACAACCGGCAAAATGATGTCCAGAT...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCATGCAGTCATCCTCATTaGAAGTGTCGAAGCACACAG +
Preference number: 4 (lower is better)
Translates to: ASGFKREGSLCTQLCVASCSHPH*KCRSTQ
Trigger: CTGTGTGCTTCGACACTTCCAATGAGGATGACTGCA...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCCATGATCCGTTCATCTaGTGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: GKTHGRSSCLPKPYHQQSHDPFI*CCTHRL
Trigger: GAGCCTGTGAGTGCAACACCAGATGAACGGATCATG...GCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTAAGTGGACATGGATGTaGTCCCTGAGTACGTCCACT +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTKWTWM*SLSTST
Trigger: AGTGGACGTACTCAGGGACCACATCCATGTCCACTT...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAGCAGCTGTACTTGTGTaGCTCAGAGTCTGCGCTCTC +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAAAVLV*LRVCAL
Trigger: GAGAGCGCAGACTCTGAGCCACACAAGTACAGCTGC...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGGCAGGTTCTCCCGGTaGATGACCATGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFGRFSR*MTMWAW
Trigger: CCATGCCCACATGGTCATCCACCGGGAGAACCTGCC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGGCTTCTGGCTGTGGGTaGATCTGGACATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMASGCG*IWTSFC
Trigger: GCAAAATGATGTCCAGATCCACCCACAGCCAGAAGC...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGAGGGTTTGTGGCTTCTaGCTGTGGGTGGATCTGGAC +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLRVCGF*LWVDLD
Trigger: GTCCAGATCCACCCACAGCCAGAAGCCACAAACCCT...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCGGCTGCAGGGGCCTGTaGCGGCTGCAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCGCRGL*RLQHIC
Trigger: ACAGATGTGCTGCAGCCGCCACAGGCCCCTGCAGCC...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGGCTGCAGGGGCCTGTaGCGGCTGCAGCACATCTGT +
Preference number: 4 (lower is better)
Translates to: VCFCVLPQKASHISVIVTGCRGL*RLQHIC
Trigger: ACAGATGTGCTGCAGCCGCCACAGGCCCCTGCAGCC...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCCAAATTGTGTGCGCTTaGCTAGCTGGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTQIVCA*LAGSLQ
Trigger: TTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTG...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTGCTCGTTCAGGAGCTaGAGCTCCAGGAAGGTGTTG +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPCSFRS*SSRKVL
Trigger: CAACACCTTCCTGGAGCTTCAGCTCCTGAACGAGCA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCATGGTAGGTGGCCTTaGGTGCGAAGCGTCGGTGGC +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCHGRWP*VRSVGG
Trigger: GCCACCGACGCTTCGCACTCAAGGCCACCTACCATG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GAGCTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCGGGAGGACCTTGCCCTaGTCAGCACAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: ELVCLHCVPLTECLPTQFGRTLP*SAQRSP
Trigger: AGGACTCCTTTGTGCTGAGCAGGGCAAGGTCCTCCC...GAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTACCTTCAGAGGAAATaGCGACTCTTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPYLQRK*RLFLPL
Trigger: AAGTGGGAGAAAGAGTCGGCATTTCCTCTGAAGGTA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGAAGCTGCCTCATGCTaGTGGCCACCTGCAGGGAGG +
Preference number: 4 (lower is better)
Translates to: VCFCVLPQKASHISVIVTEAASC*WPPAGR
Trigger: CCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTC...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAGCTCTTGCTCTCGGCTaGTGTGGGAGGCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMAALALG*CGRLHP
Trigger: AGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGC...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTCCGTTCATCTGGTGTTaGACTCACAGGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAPFIWC*THRLIW
Trigger: CCAGATGAGCCTGTGAGTGCAACACCAGATGAACGG...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGC +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFAGSGC*CSGRPC
Trigger: GCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGTAGGTGGCCTTGAGTaGGAAGCGTCGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFVGGLE*EASVAD
Trigger: ATCTGCCACCGACGCTTCGCACTCAAGGCCACCTAC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGTCATGCACACGCATGTaGTCTTTCAGCATGTCCTTC +
Preference number: 4 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMSCTRM*SFSMSF
Trigger: GAAGGACATGCTGAAAGAGCACATGCGTGTGCATGA...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTTTGGCAGCCTTTCCATaGTTACCTTCTGCCAGTTCT +
Preference number: 4 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTLAAFP*LPSASS
Trigger: AGAACTGGCAGAAGGTAAGCATGGAAAGGCTGCCAA...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAGTTCCACAGAGACACTaGGCTCAGGGGTGCCTGCAG +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMAVPQRH*AQGCLQ
Trigger: CTGCAGGCACCCCTGAGCCCAGTGTCTCTGTGGAAC...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTGCTGCCTCATGCTGCTaGCCACCTGCAGGGAGGCTT +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFAASCC*PPAGRL
Trigger: AAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGC...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGTCGAGGCTTTTTCTTTaGCTCTTTGGTGACCATGAC +
Preference number: 4 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRSRLFL*LFGDHD
Trigger: GTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGA...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGCAACCTTGGATGCTTTaGGTTTCCTCCCTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPQPWML*VSSLFE
Trigger: CTCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTG...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGACTCACAGGCTCATCTaGGGGGATCTCAGTTATGAT +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRTHRLI*GDLSYD
Trigger: ATCATAACTGAGATCCCCCCAGATGAGCCTGTGAGT...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGACTTTGGCACTGAGCTaGCTTCATTTGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWTLALS*LHLWGR
Trigger: CCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGT...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCAGGTTGCTGCTGTTCTaGAAGACCTTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSRLLLF*KTLLQV
Trigger: CACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCT...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCTCCTTGAAGTGGACATaGATGTGGTCCCTGAGTACG +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTSLKWT*MWSLST
Trigger: CGTACTCAGGGACCACATCCATGTCCACTTCAAGGA...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGGCGATGTCCTTGAAGTaGACATGGATGTGGTCCCTG +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMAMSLK*TWMWSL
Trigger: CAGGGACCACATCCATGTCCACTTCAAGGACATCGC...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGAACTCCTCCCGCTaGTGGTCATCCATTAGCGCG +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWMNSSR*WSSISA
Trigger: CGCGCTAATGGATGACCACCAGCGGGAGGAGTTCAT...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCAGTGCGAAGCGTCGGTaGCAGATGCTGCAGCCGTGG +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCSAKRR*QMLQPW
Trigger: CCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCGGCAGGTTCTCCCGGTaGATGACCATGTGGGCATGG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIGRFSR*MTMWAW
Trigger: CCATGCCCACATGGTCATCCACCGGGAGAACCTGCC...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTGTACTTCTGCACGTTaGGGTCAGGCAGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKCTSAR*GQAGSP
Trigger: GGGAGAACCTGCCTGACCCCAACGTGCAGAAGTACA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTGTACTTCTGCACGTTaGGGTCAGGCAGGTTCTCCC +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPCTSAR*GQAGSP
Trigger: GGGAGAACCTGCCTGACCCCAACGTGCAGAAGTACA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGCCCGGGTTGACACTTTaGTGCCACATAGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMPGLTL*CHIVGN
Trigger: GTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGG...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCGGCTGTGGGTGGATCTaGACATCATTTTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSGCGWI*TSFCRL
Trigger: CAACCGGCAAAATGATGTCCAGATCCACCCACAGCC...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AGCAGGTGCTTGTTCATGTTGCTCCGACAGGAGAACACCTTGCCACACACTGGGAGAGGTTGCTGTTGGTaGAGAAGAATCTGTCCTACA +
Preference number: 4 (lower is better)
Translates to: SRCLFMLLRQENTLPHTGRGCCW*RRICPT
Trigger: TGTAGGACAGATTCTTCTCCACCAACAGCAACCTCT...CCCAGTGTGTGGCAAGGTGTTCTCCTGTCGGAGCAACATGAACAAGCACCTGCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAGAACCAAGCCCCTCTTaGGGGCAATGGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMAEPSPS*GQWCCL
Trigger: CAAGCAGCACCATTGCCCTCAAGAGGGGCTTGGTTC...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCTGGTGGAGAAGAATCTaGAACACATCTCACATTGGA +
Preference number: 4 (lower is better)
Translates to: TLWSGQAATPWENTWQKLWWRRI*NTSHIG
Trigger: TCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCA...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCTGTGCAAACTTGCGGTaGCATTCCTTGCACTCATAC +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTCANLR*HSLHSY
Trigger: GTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACA...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGTGCCTACTGTGTGGATaGGCTTGTGTGTCTCCATTG +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLCLLCG*ACVSPL
Trigger: CAATGGAGACACACAAGCTCATCCACACAGTAGGCA...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGCTTCCACCTTGTCATaGGTGAGCTGGACGTGTTTC +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWASTLS*VSWTCF
Trigger: GAAACACGTCCAGCTCACTCATGACAAGGTGGAAGC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGCACCCACACTGCCTGTaGACTCTGGCTCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVHPHCL*TLAPFR
Trigger: CCGAAAAGGAGCCAGAGTTCACAGGCAGTGTGGGTG...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGGGGAGGACCTTGCCCTaGTCAGCACAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVGRTLP*SAQRSP
Trigger: AGGACTCCTTTGTGCTGAGCAGGGCAAGGTCCTCCC...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAATGCTGCTGGCCACCTaGAGGGAGGCTTTTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVMLLAT*REAFGL
Trigger: CAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCAT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATCAGAAGCTGCCTCATaGTGCTGGCCACCTGCAGGG +
Preference number: 4 (lower is better)
Translates to: TDTWGERLVLSEFLLITASEAAS*CWPPAG
Trigger: CCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAATGCGCGCACTCACCGTaGGAGCGCACGTGCCGGCTC +
Preference number: 4 (lower is better)
Translates to: KEINIDHERAIIHNVVMKCAHSP*ERTCRL
Trigger: GAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCA...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGCATATGGTGGCGCAGTaGATGCTTGGTCTTCATACC +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLHMVAQ*MLGLHT
Trigger: GGTATGAAGACCAAGCATGCACTGCGCCACCATATG...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGAATGCCGATGGAAGATaGATCGATGGTGGTGGTCTC +
Preference number: 4 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMNADGR*IDGGGL
Trigger: GAGACCACCACCATCGATGCATCTTCCATCGGCATT...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAGGACACTCCGAGTCATaGTACTGGCTGCAGTCTTCA +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRGHSES*YWLQSS
Trigger: TGAAGACTGCAGCCAGTACCATGACTCGGAGTGTCC...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCACTCTTTCTCCCACTTaGCGACTCTCCTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSTLSPT*RLSWTQ
Trigger: TTGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGT...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGGTGACCATGACACTCTaGATGCTCTTGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKVTMTL*MLLLSA
Trigger: AGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCAC...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGTCGAGGCTTTTTCTTTaGCTCTTTGGTGACCATGAC +
Preference number: 4 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRSRLFL*LFGDHD
Trigger: GTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGA...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCCATGATCCGTTCATCTaGTGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSHDPFI*CCTHRL
Trigger: GAGCCTGTGAGTGCAACACCAGATGAACGGATCATG...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCCACCTTGCCACACACTaGGCATCCAGAAGGTTCCTT +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPHLATH*ASRRFL
Trigger: AAGGAACCTTCTGGATGCCCAGTGTGTGGCAAGGTG...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCTTGTGCAGCTTCATATaGTGGCGCAGTGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSLCSFI*WRSACL
Trigger: CAAGCATGCACTGCGCCACCATATGAAGCTGCACAA...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGGCTGTGGGTGGATCTaGACATCATTTTGCCGGTTG +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWGCGWI*TSFCRL
Trigger: CAACCGGCAAAATGATGTCCAGATCCACCCACAGCC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCAGCTTCTGGCTGTGGGTaGATCTGGACATCATTTTGC +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAASGCG*IWTSFC
Trigger: GCAAAATGATGTCCAGATCCACCCACAGCCAGAAGC...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp GAGCCCAGTGCTCATTTGGGCTCAGCTCATTCATCTTaGAGAGGCTATAAAGGCAAAGAGGAACTGCGGTTG +
Preference number: 4 (lower is better)
Translates to: EPSAHLGSAHSS*RGYKGKEELRL
Trigger: CAACCGCAGTTCCTCTTTGCCTTTATAGCCTCTCAAAGATGAATGAGCTGAGCCCAAATGAGCACTGGGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGTGCAGGAATGTCCTTTaGGGTGGTGAAATACACGTC +
Preference number: 4 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLCRNVL*GGEIHV
Trigger: GACGTGTATTTCACCACCTCAAAGGACATTCCTGCA...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCTGGGAACTTTGGCACTaGGCTGGCTTCATTTGTGGG +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFWELWH*AGFICG
Trigger: CCCACAAATGAAGCCAGCTCAGTGCCAAAGTTCCCA...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTTAGCGCGATGTCCTTaGAGTGGACATGGATGTGGT +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKLARCP*SGHGCG
Trigger: ACCACATCCATGTCCACTTCAAGGACATCGCGCTAA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTTGCACTCATACTCCTTaGTGCCTTTGTGCAGCTTCA +
Preference number: 4 (lower is better)
Translates to: TLPVWYPANTSRPQNPTACTHTP*CLCAAS
Trigger: TGAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCA...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCACCCACACTGCCTGTaGACTCTGGCTCCTTTTCGG +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFHPHCL*TLAPFR
Trigger: CCGAAAAGGAGCCAGAGTTCACAGGCAGTGTGGGTG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp AGGAGCAAAGATCTGCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGCTAGCATCATCCAGTTaGAGTCATCCTCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: RSKDLPFMRPFSSRLSCPLASSS*SHPHWK
Trigger: CTTCCAATGAGGATGACTGCAACTGGATGATGCTAG...CGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGCAGATCTTTGCTCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGACTCCTTCTCAGAAGCTaGCTCATGCTGCTGGCCACC +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRLLLRS*LMLLAT
Trigger: GGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAG...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCTCAACCTTGGATaGTTTGGGTTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKLLNLG*FGFPPS
Trigger: AGAGGGAGGAAACCCAAAGCATCCAAGGTTGAGCAG...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAGCTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCCCGTTCATCTGGTGTTaGACTCACAGGCTCATCTGG +
Preference number: 4 (lower is better)
Translates to: ELVCLHCVPLTECLPTQFPFIWC*THRLIW
Trigger: CCAGATGAGCCTGTGAGTGCAACACCAGATGAACGG...GAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAGCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTGTTCTGGAAGACCTTaGTGCAGGTGCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPCSGRP*CRCHTD
Trigger: ATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TGGCGATCAGGGTTGGTAAGATGTCCAACAGCCACTGGCTGTAAATTGGTAAACTGTTCTGGAAGACCTTaGTGCAGGTGCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: WRSGLVRCPTATGCKLVNCSGRP*CRCHTD
Trigger: ATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACA...GTTTACCAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCGTGCCGGCTCAGGTTaGTGCTGTTCTGGAAGACCT +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCRAGSG*CCSGRP
Trigger: AGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCGGTAGAACATCTTACTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTGRTSY*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGTAAGATGTTCTACC...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAGACAGGAGAACACCTTaGCACACACTGGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMADRRTP*HTLGIQ
Trigger: CTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTC...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAGTAGGTGGCCTTGAGTaGGAAGCGTCGGTGGCAGAT +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRVGGLE*EASVAD
Trigger: ATCTGCCACCGACGCTTCGCACTCAAGGCCACCTAC...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTGCGTCGCATATGTCTaGTCATGGAGGCCCGGGTTG +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSCVAYV*SWRPGL
Trigger: CAACCCGGGCCTCCATGAGCAGACATATGCGACGCA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGACCTCGGGGTGCTTaGGTCGCATATGTCTGCTCA +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRGPRGA*VAYVCS
Trigger: TGAGCAGACATATGCGACGCAAGCACCCCGAGGTCC...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTCCATGCTTACCTTCTaGCAGTTCTTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKSMLTF*QFFLLQ
Trigger: CTGGAGCAGGAAGAACTGGCAGAAGGTAAGCATGGA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGTCCGAGTCATGGTACTaGCTGCAGTCTTCACACCAG +
Preference number: 4 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRSESWY*LQSSHQ
Trigger: CTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGA...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGCTGCAGCCTGAACACTaGAGCAGGCCTGCTTTAGCA +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVLQPEH*SRPALA
Trigger: TGCTAAAGCAGGCCTGCTCCAGTGTTCAGGCTGCAG...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGACTTTGGCACTGAGCTaGCTTCATTTGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVTLALS*LHLWGR
Trigger: CCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGT...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTACTTCTTGTCACCGTaGGTCAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTGACCCACGGTGACAAGAAGTA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGATACTTCTTGTCACCGTaGGTCAGCAGGTGCTTGTTC +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRYFLSP*VSRCLF
Trigger: GAACAAGCACCTGCTGACCCACGGTGACAAGAAGTA...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTCAGCATGTCCTTCCTaGCAAAGGACTTCCCACACT +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPSACPS*QRTSHT
Trigger: AGTGTGGGAAGTCCTTTGCCAGGAAGGACATGCTGA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp AGGATGGAGTTATCTAGCTGTAGCTGGCGATCAGGGTaGGTAAGATGTCCAACAGCCACTGGCTGTAAATTG +
Preference number: 4 (lower is better)
Translates to: RMELSSCSWRSG*VRCPTATGCKL
Trigger: CAATTTACAGCCAGTGGCTGTTGGACATCTTACCAACCCTGATCGCCAGCTACAGCTAGATAACTCCATCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GAGCTTGTGTGTCTCCATTGTGTTCCTCTCACTGAATGTCTTCCCACACAATTCATGGTGCTGCTTGGATaGTGTGGGAACTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: ELVCLHCVPLTECLPTQFMVLLG*CGNFGT
Trigger: AGTGCCAAAGTTCCCACATCATCCAAGCAGCACCAT...GAATTGTGTGGGAAGACATTCAGTGAGAGGAACACAATGGAGACACACAAGCTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTCATGGATGTGGTCCCTaGGTACGTCCACTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSHGCGP*VRPLGR
Trigger: TCTTCCGAGTGGACGTACTCAGGGACCACATCCATG...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGTCATCATTCTCCTCTaGGGAGATCCCAATTTTGCC +
Preference number: 4 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWVIILL*GDPNFA
Trigger: GGCAAAATTGGGATCTCCTCAGAGGAGAATGATGAC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCACATGGCGGAGCCACTaGCAGTATCAAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRITWRSH*QYQRSQ
Trigger: CTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGT...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAGGGAGGACCTTGCCCTaGTCAGCACAAAGGAGTCCT +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALGRTLP*SAQRSP
Trigger: AGGACTCCTTTGTGCTGAGCAGGGCAAGGTCCTCCC...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CAGTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCATACCTTCAGAGGAAATaGCGACTCTTTCTCCCACTT +
Preference number: 4 (lower is better)
Translates to: QFVFCHEDLYCSHHHMEAYLQRK*RLFLPL
Trigger: AAGTGGGAGAAAGAGTCGGCATTTCCTCTGAAGGTA...TGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTGGGAGGCTTTTGGCTTaGTCCAGATGGCCCAAGAGA +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSGRLLA*SRWPKR
Trigger: TCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCC...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGACAGGAGAACACCTTaGCACACACTGGGCATCCAG +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRDRRTP*HTLGIQ
Trigger: CTGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTC...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTGCAGTCATCCTCATTaGAAGTGTCGAAGCACACAG +
Preference number: 4 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPCSHPH*KCRSTQ
Trigger: CTGTGTGCTTCGACACTTCCAATGAGGATGACTGCA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCTTGGCTTGCTCCAGATaGCCCAAGAGATGCTCGTTC +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRILACSR*PKRCSF
Trigger: GAACGAGCATCTCTTGGGCCATCTGGAGCAAGCCAA...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCGAGGCTGCTCAACCTTaGATGCTTTGGGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIEAAQP*MLWVSS
Trigger: GGAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTC...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGACTCACAGGCTCATCTaGGGGGATCTCAGTTATGAT +
Preference number: 4 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKTHRLI*GDLSYD
Trigger: ATCATAACTGAGATCCCCCCAGATGAGCCTGTGAGT...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCATGCAGCTTCATATGGTaGCGCAGTGCATGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMACSFIW*RSACLV
Trigger: GACCAAGCATGCACTGCGCCACCATATGAAGCTGCA...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCTGTGGCTTCTGGCTGTaGGTGGATCTGGACATCATT +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFCGFWL*VDLDII
Trigger: AATGATGTCCAGATCCACCCACAGCCAGAAGCCACA...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTATGCTCGCCAGGTGAGTaGGTGCTGCTCACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALCSPGE*VLLTEL
Trigger: CAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCA...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGCTCTGCCACATGCTCTaGAGGCTCCTTGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVLCHML*RLLVFD
Trigger: ATCAAAGACAAGGAGCCTTCAGAGCATGTGGCAGAG...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCACTCTGCCACATGCTCTaGAGGCTCCTTGTCTTTGAT +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMALCHML*RLLVFD
Trigger: ATCAAAGACAAGGAGCCTTCAGAGCATGTGGCAGAG...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTGGGGGATCTCAGTTATaGTCTCTGCCACATGCTCTG +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFGGSQL*SLPHAL
Trigger: CAGAGCATGTGGCAGAGATCATAACTGAGATCCCCC...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCTGGTGGAGAAGAATCTaGAACACATCTCACATTGGA +
Preference number: 4 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSWWRRI*NTSHIG
Trigger: TCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCA...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTACATGGATGTGGTCCCTaGGTACGTCCACTCGGAAGA +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALHGCGP*VRPLGR
Trigger: TCTTCCGAGTGGACGTACTCAGGGACCACATCCATG...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGATCACACCTGTGTGGATaGGTTTGTGGCGCTCCAAGT +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRSHLCG*VCGAPS
Trigger: ACTTGGAGCGCCACAAACTCATCCACACAGGTGTGA...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGCTTCCACCTTGTCATaGGTGAGCTGGACGTGTTTC +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRASTLS*VSWTCF
Trigger: GAAACACGTCCAGCTCACTCATGACAAGGTGGAAGC...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAACATGGCGGAGCCACTaGCAGTATCAAAGGTCACAG +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRTWRSH*QYQRSQ
Trigger: CTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGT...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTGATAAAGTGGGCCACTaGCTGAGGGTTTGTGGCTTC +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFDKVGH*LRVCGF
Trigger: GAAGCCACAAACCCTCAGTCAGTGGCCCACTTTATC...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGTGTTCTGGAAGACCTTaGTGCAGGTGCCACACTGAT +
Preference number: 4 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWCSGRP*CRCHTD
Trigger: ATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACA...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAGGTAGAACATCTTACTaGAGACCTCACAGGCAAACT +
Preference number: 4 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRGRTSY*RPHRQT
Trigger: AGTTTGCCTGTGAGGTCTGCAGTAAGATGTTCTACC...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGCTTTCTCTTGTGGCTaGGCTTGGCAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: TDTWGERLVLSEFLLITAAFSCG*AWQPFH
Trigger: ATGGAAAGGCTGCCAAGCGCAGCCACAAGAGAAAGC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAGCTTTCTCTTGTGGCTaGGCTTGGCAGCCTTTCCAT +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRAFSCG*AWQPFH
Trigger: ATGGAAAGGCTGCCAAGCGCAGCCACAAGAGAAAGC...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTAAACTGAGTTCCAGCTaGAGTGGTGATGGGGGTCAC +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSKLSSS*SGDGGH
Trigger: GTGACCCCCATCACCACTGCAGCTGGAACTCAGTTT...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGACTCTTTCTCCCACTTaGCGACTCTCCTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWTLSPT*RLSWTQ
Trigger: TTGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGT...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAACTCTTTCTCCCACTTaGCGACTCTCCTGGACTCAA +
Preference number: 4 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVTLSPT*RLSWTQ
Trigger: TTGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTGTGACCATGACACTCTaGATGCTCTTGCTCTCGGCT +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSVTMTL*MLLLSA
Trigger: AGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCAC...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGAGGCTGCTCAACCTTaGATGCTTTGGGTTTCCTCC +
Preference number: 4 (lower is better)
Translates to: TDTWGERLVLSEFLLITAEAAQP*MLWVSS
Trigger: GGAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCACTCACAGGCTCATCTaGGGGGATCTCAGTTATGAT +
Preference number: 4 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFTHRLI*GDLSYD
Trigger: ATCATAACTGAGATCCCCCCAGATGAGCCTGTGAGT...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAACTTTGGCACTGAGCTaGCTTCATTTGTGGGGGCGG +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALTLALS*LHLWGR
Trigger: CCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGT...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCAAGTGGACATGGATGTaGTCCCTGAGTACGTCCACT +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIKWTWM*SLSTST
Trigger: AGTGGACGTACTCAGGGACCACATCCATGTCCACTT...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCTCCTTGAAGTGGACATaGATGTGGTCCCTGAGTACG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRISLKWT*MWSLST
Trigger: CGTACTCAGGGACCACATCCATGTCCACTTCAAGGA...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCGTGTGGATGAGTTTGTaGCGCTCCAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIVWMSL*RSKFPM
Trigger: CATTGGGAACTTGGAGCGCCACAAACTCATCCACAC...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTGCAGCTTCATATGGTaGCGCAGTGCATGCTTGGTC +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSCSFIW*RSACLV
Trigger: GACCAAGCATGCACTGCGCCACCATATGAAGCTGCA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCCCGGGTTGACACTTTaGTGCCACATAGTTGGCAAC +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCPGLTL*CHIVGN
Trigger: GTTGCCAACTATGTGGCACCAAAGTGTCAACCCGGG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAATGGAGCAGTCACATTaGGGTCCCCTAGGGTCACCA +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALMEQSH*GPLGSP
Trigger: TGGTGACCCTAGGGGACCCCAATGTGACTGCTCCAT...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
3UTR CAA 72 bp CAGGAGCAAGGAGAAACCTGCGTTTGCTTCTGTGTGTaGCCACAGAAGGCTAGCCATATTTCAGTTATTGTC +
Preference number: 4 (lower is better)
Translates to: QEQGETCVCFCV*PQKASHISVIV
Trigger: GACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAACGCAGGTTTCTCCTTGCTCCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp TACTTGTGTGGCTCAGAGTCTGCGCTCTCATCAGAGTaGTCATCATTCTCCTCTGAGGAGATCCCAATTTTG +
Preference number: 4 (lower is better)
Translates to: YLCGSESALSSE*SSFSSEEIPIL
Trigger: CAAAATTGGGATCTCCTCAGAGGAGAATGATGACAACTCTGATGAGAGCGCAGACTCTGAGCCACACAAGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCAAATTGTGTGCGCTTaGCTAGCTGGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCQIVCA*LAGSLQ
Trigger: TTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTCAAATTGTGTGCGCTTaGCTAGCTGGGTCACTGCAA +
Preference number: 4 (lower is better)
Translates to: VCFCVLPQKASHISVIVTQIVCA*LAGSLQ
Trigger: TTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTG...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTGCAGGAATGTCCTTTaGGGTGGTGAAATACACGTC +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVCRNVL*GGEIHV
Trigger: GACGTGTATTTCACCACCTCAAAGGACATTCCTGCA...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAATGGTGCTGCTTGGATaGTGTGGGAACTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRMVLLG*CGNFGT
Trigger: AGTGCCAAAGTTCCCACATCATCCAAGCAGCACCAT...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAGTCATCATTCTCCTCTaGGGAGATCCCAATTTTGCC +
Preference number: 4 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVVIILL*GDPNFA
Trigger: GGCAAAATTGGGATCTCCTCAGAGGAGAATGATGAC...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTGTGCAAACTTGCGGTaGCATTCCTTGCACTCATAC +
Preference number: 4 (lower is better)
Translates to: LNISYGSTMVYVCGVPGVCANLR*HSLHSY
Trigger: GTATGAGTGCAAGGAATGTCACCGCAAGTTTGCACA...CACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAAGCTGGACGTGTTTCTaGAGCATGTACTCTGTGACG +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRSWTCF*SMYSVT
Trigger: CGTCACAGAGTACATGCTTCAGAAACACGTCCAGCT...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTCTGCTCAACCTTGGATaGTTTGGGTTTCCTCCCTCT +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSLLNLG*FGFPPS
Trigger: AGAGGGAGGAAACCCAAAGCATCCAAGGTTGAGCAG...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCACACTGATGGATaGGTTTATGCTCACCCAGCT +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRCHTDG*VYAHPA
Trigger: AGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTGGTGGCGCAGTGCATaGTTGGTCTTCATACCTTTC +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSWWRSA*LVFIPF
Trigger: GAAAGGTATGAAGACCAAGCATGCACTGCGCCACCA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCTGGTGGCGCAGTGCATaGTTGGTCTTCATACCTTTC +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCWWRSA*LVFIPF
Trigger: GAAAGGTATGAAGACCAAGCATGCACTGCGCCACCA...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTCCATGCTTACCTTCTaGCAGTTCTTCCTGCTCCAG +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSSMLTF*QFFLLQ
Trigger: CTGGAGCAGGAAGAACTGGCAGAAGGTAAGCATGGA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGG +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCRPALA*ACPSSW
Trigger: CCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCT...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCAACCTTGGATGCTTTaGGTTTCCTCCCTCTTCGAG +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCQPWML*VSSLFE
Trigger: CTCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTCATGATCCGTTCATCTaGTGTTGCACTCACAGGCTC +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFHDPFI*CCTHRL
Trigger: GAGCCTGTGAGTGCAACACCAGATGAACGGATCATG...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CCA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTAAACACATCTCACATTaGAACGTCTTGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: TLPVWYPANTSRPQNPTAKHISH*NVLSSV
Trigger: GACAGATGACAAGACGTTCCAATGTGAGATGTGTTT...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTGTGTGGATGAGTTTGTaGCGCTCCAAGTTCCCAATG +
Preference number: 4 (lower is better)
Translates to: VCFCVLPQKASHISVIVTVWMSL*RSKFPM
Trigger: CATTGGGAACTTGGAGCGCCACAAACTCATCCACAC...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATTGTGCAGCTTCATATaGTGGCGCAGTGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRLCSFI*WRSACL
Trigger: CAAGCATGCACTGCGCCACCATATGAAGCTGCACAA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTGCTTGCCTACTGTGTaGATGAGCTTGTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSCLPTV*MSLCVS
Trigger: GGAGACACACAAGCTCATCCACACAGTAGGCAAGCA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCTTCTGCTTTCTCTTGTaGCTGCGCTTGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCFCFLL*LRLAAF
Trigger: AAAGGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAA...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTTCTGCTTTCTCTTGTaGCTGCGCTTGGCAGCCTTT +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFFCFLL*LRLAAF
Trigger: AAAGGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAA...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAGGTATCCTCAGGCACTaGAGCCCCTGCCTCTTCCTC +
Preference number: 4 (lower is better)
Translates to: KEINIDHERAIIHNVVMKGILRH*SPCLFL
Trigger: GAGGAAGAGGCAGGGGCTCCAGTGCCTGAGGATACC...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAATGGTGCTGCTTGGATaGTGTGGGAACTTTGGCACT +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALMVLLG*CGNFGT
Trigger: AGTGCCAAAGTTCCCACATCATCCAAGCAGCACCAT...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGGAAGCATGTACTCTGTaGCGTACTTCTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWEACTL*RTSCHT
Trigger: TGTGTGACAAGAAGTACGTCACAGAGTACATGCTTC...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCTGTAAATTGGTAAACTaGGTTCCAGCTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRICKLVN*VPAAVV
Trigger: CACCACTGCAGCTGGAACTCAGTTTACCAATTTACA...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCCTAGCATCATCCAGTTaGAGTCATCCTCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRILASSS*SHPHWK
Trigger: CTTCCAATGAGGATGACTGCAACTGGATGATGCTAG...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCACTAGCATCATCCAGTTaGAGTCATCCTCATTGGAAG +
Preference number: 4 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMALASSS*SHPHWK
Trigger: CTTCCAATGAGGATGACTGCAACTGGATGATGCTAG...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR GCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTACATATGGTGGCGCAGTaGATGCTTGGTCTTCATACC +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALHMVAQ*MLGLHT
Trigger: GGTATGAAGACCAAGCATGCACTGCGCCACCATATG...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTATGCTTGCCTACTGTGTaGATGAGCTTGTGTGTCTCC +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALCLPTV*MSLCVS
Trigger: GGAGACACACAAGCTCATCCACACAGTAGGCAAGCA...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAATGCTCGCCAGGTGAGTaGGTGCTGCTCACTGAGTTG +
Preference number: 4 (lower is better)
Translates to: KEINIDHERAIIHNVVMKCSPGE*VLLTEL
Trigger: CAACTCAGTGAGCAGCACCCACTCACCTGGCGAGCA...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTGAAGCATGTACTCTGTaGCGTACTTCTTGTCACACA +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFEACTL*RTSCHT
Trigger: TGTGTGACAAGAAGTACGTCACAGAGTACATGCTTC...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp TACTTCCAGGAAACACAGGACCAAGGACGAAGTAAGGCAAGTTCATCTTTAAGTTGTAAATTGGTAAACTaGGTTCCAGCTGCAGTGGTG +
Preference number: 4 (lower is better)
Translates to: YFQETQDQGRSKASSSLSCKLVN*VPAAVV
Trigger: CACCACTGCAGCTGGAACTCAGTTTACCAATTTACA...ACTTAAAGATGAACTTGCCTTACTTCGTCCTTGGTCCTGTGTTTCCTGGAAGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR GCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTATGCACCTCCATGATGTaGTTCAGGTATTCCTTCCCA +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALCTSMM*FRYSFP
Trigger: TGGGAAGGAATACCTGAAGCACATCATGGAGGTGCA...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATCGAGGCTTTTTCTTTaGCTCTTTGGTGACCATGAC +
Preference number: 4 (lower is better)
Translates to: WGERLVLSEFLLITAGSRSRLFL*LFGDHD
Trigger: GTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGA...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTTGTGTTCCTCTCACTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFLCSSH*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGTGAGAGGAACACAA...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR TCA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCTTGTGTTCCTCTCACTaGATGTCTTCCCACACAATT +
Preference number: 4 (lower is better)
Translates to: GERLVLSEFLLITAGSRCLCSSH*MSSHTI
Trigger: AATTGTGTGGGAAGACATTCAGTGAGAGGAACACAA...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAAGGTTGCTGCTGTTCTaGAAGACCTTGCTGCAGGTG +
Preference number: 4 (lower is better)
Translates to: KEINIDHERAIIHNVVMKRLLLF*KTLLQV
Trigger: CACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCT...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
3UTR CAA 72 bp CTGATAGGTAGCTCTGTAATGCTAATCTCAGTGATCTaGACATTTGCAAACTCTTCCTGTTTGGTATCCAGC +
Preference number: 4 (lower is better)
Translates to: LIGSSVMLISVI*TFANSSCLVSS
Trigger: GCTGGATACCAAACAGGAAGAGTTTGCAAATGTCAAGATCACTGAGATTAGCATTACAGAGCTACCTATCAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR TCA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAAGCTGGACGTGTTTCTaGAGCATGTACTCTGTGACG +
Preference number: 4 (lower is better)
Translates to: KEINIDHERAIIHNVVMKSWTCF*SMYSVT
Trigger: CGTCACAGAGTACATGCTTCAGAAACACGTCCAGCT...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CCA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAAAACACATCTCACATTaGAACGTCTTGTCATCTGTC +
Preference number: 4 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALKHISH*NVLSSV
Trigger: GACAGATGACAAGACGTTCCAATGTGAGATGTGTTT...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 90 bp CGTGCGCGCACTCACCGTGCGAGCGCACGTGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGCTGCAGGTGCCACACTGATGGATGC +
Preference number: 5 (lower is better)
Translates to: RARTHRASARAGSGC*CSGRPCCRCHTDGC
Trigger: GCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACG
64% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 90 bp CTGGATGCTCTTGCTCTCGGCTGCTGTGGGAGGCTCCATCCTGGGTaGATCAGGCTCCTTCTCAGAAGCTGCCTCATGCTGCTGGCCACC +
Preference number: 5 (lower is better)
Translates to: LDALALGCCGRLHPG*IRLLLRSCLMLLAT
Trigger: GGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGCATCCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp TCCATCCTGGGTGCATCAGGCTCCTTCTCAGAAGCTGCCTCATGCTaGTGGCCACCTGCAGGGAGGCTTTTGGCTTGCTCCAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: SILGASGSFSEAASC*WPPAGRLLACSRWP
Trigger: GGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp GGCTCCATCCTGGGTGCATCAGGCTCCTTCTCAGAAGCTGCCTCATaGTGCTGGCCACCTGCAGGGAGGCTTTTGGCTTGCTCCAGATGG +
Preference number: 5 (lower is better)
Translates to: GSILGASGSFSEAAS*CWPPAGRLLACSRW
Trigger: CCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGAGCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp TGTGGGAGGCTCCATCCTGGGTGCATCAGGCTCCTTCTCAGAAGCTaGCTCATGCTGCTGGCCACCTGCAGGGAGGCTTTTGGCTTGCTC +
Preference number: 5 (lower is better)
Translates to: CGRLHPGCIRLLLRS*LMLLATCREAFGLL
Trigger: GAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGAGCCTCCCACA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp ACACCTTACACACCCATTGGCCACGCTCAGGTTCCACAGAGACACTaGGCTCAGGGGTGCCTGCAGCCTGAACACTGGAGCAGGCCTGCT +
Preference number: 5 (lower is better)
Translates to: TPYTPIGHAQVPQRH*AQGCLQPEHWSRPA
Trigger: AGCAGGCCTGCTCCAGTGTTCAGGCTGCAGGCACCCCTGAGCCCAGTGTCTCTGTGGAACCTGAGCGTGGCCAATGGGTGTGTAAGGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 90 bp CACTCTGGATGCTCTTGCTCTCGGCTGCTGTGGGAGGCTCCATCCTaGGTGCATCAGGCTCCTTCTCAGAAGCTGCCTCATGCTGCTGGC +
Preference number: 5 (lower is better)
Translates to: HSGCSCSRLLWEAPS*VHQAPSQKLPHAAG
Trigger: GCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGCATCCAGAGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp TGCTGCTGTTCTGGAAGACCTTGCTGCAGGTGCCACACTGATGGATaGGTTTATGCTCACCCAGCTGACGGACGAGCTTCCGCCGGACGC +
Preference number: 5 (lower is better)
Translates to: CCCSGRPCCRCHTDG*VYAHPADGRASAGR
Trigger: GCGTCCGGCGGAAGCTCGTCCGTCAGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp GCGAGCGCACGTGCCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTaGTGCAGGTGCCACACTGATGGATGCGTTTATGCTCACCCAGCT +
Preference number: 5 (lower is better)
Translates to: ASARAGSGCCCSGRP*CRCHTDGCVYAHPA
Trigger: AGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp CATTCCTCACATTTAAACAGCTTGTCCCCGTGCGCGCACTCACCGTaGGAGCGCACGTGCCGGCTCAGGTTGCTGCTGTTCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: HSSHLNSLSPCAHSP*ERTCRLRLLLFWKT
Trigger: GGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAAGCTGTTTAAATGTGAGGAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCACCTGCAGGGAGGCTTTaGGCTTGCTCCAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAAPAGRL*ACSRWP
Trigger: GGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGG...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp AGTGCGAAGCGTCGGTGGCAGATGCTGCAGCCGTGGCCCTTCTCCTTGTGCACCTCCGTTCATCTGGTGTaGCACTCACAGGCTCATCTG +
Preference number: 5 (lower is better)
Translates to: SAKRRWQMLQPWPFSLCTSVHLV*HSQAHL
Trigger: CAGATGAGCCTGTGAGTGCAACACCAGATGAACGGA...GGTGCACAAGGAGAAGGGCCACGGCTGCAGCATCTGCCACCGACGCTTCGCACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTCTGAGCTGGCTTCATTaGTGGGGGCGGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPALSWLH*WGRPAS
Trigger: GGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAG...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp TGCATCAGGCTCCTTCTCAGAAGCTGCCTCATGCTGCTGGCCACCTaGAGGGAGGCTTTTGGCTTGCTCCAGATGGCCCAAGAGATGCTC +
Preference number: 5 (lower is better)
Translates to: CIRLLLRSCLMLLAT*REAFGLLQMAQEML
Trigger: GAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp CGTGCCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTGCTGCAGGTaGCACACTGATGGATGCGTTTATGCTCACCCAGCTGACGGACGA +
Preference number: 5 (lower is better)
Translates to: RAGSGCCCSGRPCCR*HTDGCVYAHPADGR
Trigger: TCGTCCGTCAGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp AGCGCACGTGCCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTGCTaGAGGTGCCACACTGATGGATGCGTTTATGCTCACCCAGCTGAC +
Preference number: 5 (lower is better)
Translates to: SARAGSGCCCSGRPC*RCHTDGCVYAHPAD
Trigger: GTCAGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp TCTCAGAAGCTGCCTCATGCTGCTGGCCACCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCAAGAGATGCTCCTGAACACTGGAGC +
Preference number: 5 (lower is better)
Translates to: SQKLPHAAGHLQGGF*LAPDGPRDAPEHWS
Trigger: GCTCCAGTGTTCAGGAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS GCA 90 bp TGTGGAACTCCAGTGCACTCTCCATTCGGAATGTCTTCCCACAGCTaGCACAGCGGTAGCGGTACTCACCGTCCACCTCATTCCGGCTGT +
Preference number: 5 (lower is better)
Translates to: CGTPVHSPFGMSSHS*HSGSGTHRPPHSGC
Trigger: ACAGCCGGAATGAGGTGGACGGTGAGTACCGCTACCGCTGTGGCAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp ACTCTCCTGGACTCAAACGGACCAAATTGTGTGCGCTTGACTAGCTaGGTCACTGCAAACACGCCTTCAGCCCCGTCATCCAGGCGCCTG +
Preference number: 5 (lower is better)
Translates to: TLLDSNGPNCVRLTS*VTANTPSAPSSRRL
Trigger: CAGGCGCCTGGATGACGGGGCTGAAGGCGTGTTTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTGGTCCGTTTGAGTCCAGGAGAGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp GGCCCAAGAGATGCTCGTTCAGGAGCTGAAGCTCCAGGAAGGTGTTaGAGCACACCTTACACACCCATTGGCCACGCTCAGGTTCCACAG +
Preference number: 5 (lower is better)
Translates to: GPRDARSGAEAPGRC*STPYTPIGHAQVPQ
Trigger: CTGTGGAACCTGAGCGTGGCCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCTTCAGCTCCTGAACGAGCATCTCTTGGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 90 bp TCTCAGAAGCTGCCTCATGCTGCTGGCCACCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCAAGAGATGCTCGTTCAGGAGCTGAA +
Preference number: 5 (lower is better)
Translates to: SQKLPHAAGHLQGGF*LAPDGPRDARSGAE
Trigger: TTCAGCTCCTGAACGAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCAGGGGAGGGAGGACCTaGCCCTGCTCAGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: GKTHGRSSCLPKPYHQQSRGGRT*PCSAQR
Trigger: CCTTTGTGCTGAGCAGGGCAAGGTCCTCCCTCCCCT...GCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTCTGAGCTGGCTTCATTaGTGGGGGCGGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTLSWLH*WGRPAS
Trigger: GGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAG...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTACGTGCCGGCTCAGGTaGCTGCTGTTCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPTCRLR*LLFWKT
Trigger: GGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGT...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTCGCAGGTGTACTTCTaGTCACCGTGGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPASQVYF*SPWVSR
Trigger: CCTGCTGACCCACGGTGACAAGAAGTACACCTGCGA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGCCACTGACTGAGGGTTaGTGGCTTCTGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: PVTMGIARVCASHVPSELPLTEG*WLLAVG
Trigger: ACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGG...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 90 bp TCTGGTGCCCAGGCTCCAGTGCTGGTCGCACTAGCATCATCCAGTTaGAGTCATCCTCATTGGAAGTGTCGAAGCACACAGGATGCCCGT +
Preference number: 5 (lower is better)
Translates to: SGAQAPVLVALASSS*SHPHWKCRSTQDAR
Trigger: ACGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACCAGCACTGGAGCCTGGGCACCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp GGCATCCAGAAGGTTCCTTCTTGTAACGAACCAGGCTTTCCCCGCTaGCCTCCAAGTCTTCTCTCTTCACCCGCCGCACACCATCCAAGT +
Preference number: 5 (lower is better)
Translates to: GIQKVPSCNEPGFPR*PPSLLSSPAAHHPS
Trigger: ACTTGGATGGTGTGCGGCGGGTGAAGAGAGAAGACTTGGAGGCCAGCGGGGAAAGCCTGGTTCGTTACAAGAAGGAACCTTCTGGATGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTCCACTCGGAAGAACTaGCGCCCACAGATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: SSRGASGFKREGSLCTQLSTRKN*RPQISQ
Trigger: CTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGA...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCTCATGGAGGCCCGGGTaGACACTTTGGTGCCACATA +
Preference number: 5 (lower is better)
Translates to: LCVASHKASVHNWTGTDTSWRPG*TLWCHI
Trigger: TATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGA...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GCCTTTCATGAGACCATTCTCCAGCAGGCTTTCATGCCCGACATAGGAGAGGGCCCACTGACTGAGGGTTaGTGGCTTCTGGCTGTGGGT +
Preference number: 5 (lower is better)
Translates to: AFHETILQQAFMPDIGEGPLTEG*WLLAVG
Trigger: ACCCACAGCCAGAAGCCACAAACCCTCAGTCAGTGG...GCCCTCTCCTATGTCGGGCATGAAAGCCTGCTGGAGAATGGTCTCATGAAAGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTGTGCTGCTCACTGAGTaGGTTCCCCAAGGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPAVLLTE*VPQGCD
Trigger: ATCACACCCTTGGGGAACCAACTCAGTGAGCAGCAC...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS TCA 90 bp ACTTGGCGACTCTCCTGGACTCAAACGGACCAAATTGTGTGCGCTTaGCTAGCTGGGTCACTGCAAACACGCCTTCAGCCCCGTCATCCA +
Preference number: 5 (lower is better)
Translates to: TWRLSWTQTDQIVCA*LAGSLQTRLQPRHP
Trigger: TGGATGACGGGGCTGAAGGCGTGTTTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTGGTCCGTTTGAGTCCAGGAGAGTCGCCAAGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp CAGGGGTGCCTGCAGCCTGAACACTGGAGCAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGGCATAAAAGGCAGCATACCACACAC +
Preference number: 5 (lower is better)
Translates to: QGCLQPEHWSRPALA*ACPSSWHKRQHTTH
Trigger: GTGTGTGGTATGCTGCCTTTTATGCCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTCAGGCTGCAGGCACCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGAGCACAAAGGAGTCCTaGACCATGACCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: SSRGASGFKREGSLCTQLSTKES*TMTTGP
Trigger: GGGACCTGTGGTCATGGTCAAGGACTCCTTTGTGCT...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGCCTGCAGGGAGGCTTTaGGCTTGCTCCAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLPAGRL*ACSRWP
Trigger: GGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGG...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGTCGCAGGTGTACTTCTaGTCACCGTGGGTCAGCAGG +
Preference number: 5 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMSQVYF*SPWVSR
Trigger: CCTGCTGACCCACGGTGACAAGAAGTACACCTGCGA...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTGTGTGTGGCCTCACACAAGGCATCTGTGCACAACTGGACAGGGACTGACACCGAACAAGTCCACTGCTaGCCTACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: LCVASHKASVHNWTGTDTEQVHC*PTVWMS
Trigger: GCTCATCCACACAGTAGGCAAGCAGTGGACTTGTTC...GGTGTCAGTCCCTGTCCAGTTGTGCACAGATGCCTTGTGTGAGGCCACACACAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS TCA 90 bp CTTTTGGCTTGCTCCAGATGGCCCAAGAGATGCTCGTTCAGGAGCTaGAGCTCCAGGAAGGTGTTGGAGCACACCTTACACACCCATTGG +
Preference number: 5 (lower is better)
Translates to: LLACSRWPKRCSFRS*SSRKVLEHTLHTHW
Trigger: CCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCTTCAGCTCCTGAACGAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGAGGGGAGGGAGGACCTaGCCCTGCTCAGCACAAAGG +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWRGGRT*PCSAQR
Trigger: CCTTTGTGCTGAGCAGGGCAAGGTCCTCCCTCCCCT...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTCAACCTTGGATGCTTaGGGTTTCCTCCCTCTTCGA +
Preference number: 5 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPASTLDA*GFLPLR
Trigger: TCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTGA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATCATCTGTCCTACAGTaGTGGAACTCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAASSVLQ*WNSSAL
Trigger: GAGTGCACTGGAGTTCCACAACTGTAGGACAGATGA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGAGGAGATCCCAATTTaGCCAATGAACTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: ASGFKREGSLCTQLCVASEEIPI*PMNSSR
Trigger: GCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CCTGTTACCATGGGGATAGCACGGGTTTGTGCCAGCCATGTTCCCTCAGAGCTGGCGCTCTCATCAGAGTaGTCATCATTCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: PVTMGIARVCASHVPSELALSSE*SSFSSE
Trigger: CTCAGAGGAGAATGATGACAACTCTGATGAGAGCGC...CAGCTCTGAGGGAACATGGCTGGCACAAACCCGTGCTATCCCCATGGTAACAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCCCGTGGCCCTTCTCCTaGTGCACCTCCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSPWPFS*CTSMMC
Trigger: GCACATCATGGAGGTGCACAAGGAGAAGGGCCACGG...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGTCATGGAGGCCCGGGTaGACACTTTGGTGCCACATA +
Preference number: 5 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMSWRPG*TLWCHI
Trigger: TATGTGGCACCAAAGTGTCAACCCGGGCCTCCATGA...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCAGGTCACCACCACCTGTaGGATACTCTGTACAGCAGA +
Preference number: 5 (lower is better)
Translates to: ASGFKREGSLCTQLCVASGHHHL*DTLYSR
Trigger: TCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACC...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCACTGCTGATGGAGCAGTCACATaGGGGTCCCCTAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: TLPVWYPANTSRPQNPTADGAVT*GSPRVT
Trigger: GGTGACCCTAGGGGACCCCAATGTGACTGCTCCATC...AGCAGTGGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TCAGGCGACCCACAGACCTGCAGACTTGTCCTCAAGTGCCATCTCTTCCTTATGGTGCTGCTCACTGAGTaGGTTCCCCAAGGGTGTGAT +
Preference number: 5 (lower is better)
Translates to: SGDPQTCRLVLKCHLFLMVLLTE*VPQGCD
Trigger: ATCACACCCTTGGGGAACCAACTCAGTGAGCAGCAC...CATAAGGAAGAGATGGCACTTGAGGACAAGTCTGCAGGTCTGTGGGTCGCCTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS TCA 90 bp GGCAGCATACCACACACGCAGTTCAGTGCCTGCAGGAATGTCCTTTaGGGTGGTGAAATACACGTCACTGCCATGTTGGTAGGCTGTCAG +
Preference number: 5 (lower is better)
Translates to: GSIPHTQFSACRNVL*GGEIHVTAMLVGCQ
Trigger: CTGACAGCCTACCAACATGGCAGTGACGTGTATTTCACCACCTCAAAGGACATTCCTGCAGGCACTGAACTGCGTGTGTGGTATGCTGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp GAACACTGGAGCAGGCCTGCTTTAGCATGGGCTTGTCCATCTTCTTaGCATAAAAGGCAGCATACCACACACGCAGTTCAGTGCCTGCAG +
Preference number: 5 (lower is better)
Translates to: EHWSRPALAWACPSS*HKRQHTTHAVQCLQ
Trigger: CTGCAGGCACTGAACTGCGTGTGTGGTATGCTGCCTTTTATGCCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp GGCCCAAGAGATGCTCCTGAACACTGGAGCAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGGCATAAAAGGCAGCATACCACACAC +
Preference number: 5 (lower is better)
Translates to: GPRDAPEHWSRPALA*ACPSSWHKRQHTTH
Trigger: GTGTGTGGTATGCTGCCTTTTATGCCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTCAGGAGCATCTCTTGGGCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACACTGTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCTCAACCTTGGATGCTTaGGGTTTCCTCCCTCTTCGA +
Preference number: 5 (lower is better)
Translates to: TLWSGQAATPWENTWQKLSTLDA*GFLPLR
Trigger: TCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTGA...GAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCACAGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCGGCTTCTGCTTTCTCTaGTGGCTGCGCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPGFCFL*WLRLAA
Trigger: GGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAAGCC...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTGATCTGGACATCATTTaGCCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPDLDII*PVVQHG
Trigger: GCCATGTTGCACAACCGGCAAAATGATGTCCAGATC...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS TCA 90 bp ACCACACACGCAGTTCAGTGCCTGCAGGAATGTCCTTTGAGGTGGTaGAATACACGTCACTGCCATGTTGGTAGGCTGTCAGGTTCTGGT +
Preference number: 5 (lower is better)
Translates to: TTHAVQCLQECPLRW*NTRHCHVGRLSGSG
Trigger: ACCAGAACCTGACAGCCTACCAACATGGCAGTGACGTGTATTTCACCACCTCAAAGGACATTCCTGCAGGCACTGAACTGCGTGTGTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp TGCTGTTGGTGGAGAAGAATCTGTCCTACAGTTGTGGAACTCCAGTaGACTCTCCATTCGGAATGTCTTCCCACAGCTGCCACAGCGGTA +
Preference number: 5 (lower is better)
Translates to: CCWWRRICPTVVELQ*TLHSECLPTAATAV
Trigger: TACCGCTGTGGCAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATTCTTCTCCACCAACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CCA 90 bp CCAGTGCTGGTCGCACTAGCATCATCCAGTTGCAGTCATCCTCATTaGAAGTGTCGAAGCACACAGGATGCCCGTCCTTCTGAAATACCT +
Preference number: 5 (lower is better)
Translates to: PVLVALASSSCSHPH*KCRSTQDARPSEIP
Trigger: AGGTATTTCAGAAGGACGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACCAGCACTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGACGTGCCGGCTCAGGTaGCTGCTGTTCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRTCRLR*LLFWKT
Trigger: GGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGT...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTGGTCTGGCCAGGCTGCAACACCTTGGGAAAACACATGGCAGAAGCTCCTGCTTCACATTGGAACGTCTaGTCATCTGTCCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: VVWPGCNTLGKHMAEAPASHWNV*SSVLQL
Trigger: CAACTGTAGGACAGATGACAAGACGTTCCAATGTGA...AGCAGGAGCTTCTGCCATGTGTTTTCCCAAGGTGTTGCAGCCTGGCCAGACCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CCCCATGACAATTACAGACCTCTGAGGGTGACACTGTGGTCTGGCCAGGCTGCATCACAGGCAAACTTCTaGTCCCCATGTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: PHDNYRPLRVTLWSGQAASQANF*SPCFFL
Trigger: CAAGAAGAAACATGGGGACAAGAAGTTTGCCTGTGA...TGCAGCCTGGCCAGACCACAGTGTCACCCTCAGAGGTCTGTAATTGTCATGGGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTGCGCTCTCATCAGAGTaGTCATCATTCTCCTCTGAG +
Preference number: 5 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTALSSE*SSFSSE
Trigger: CTCAGAGGAGAATGATGACAACTCTGATGAGAGCGC...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGGTGAGCTGGCACCTCTaGCAGCTGTACTTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKVSWHL*QLYLCG
Trigger: GCCACACAAGTACAGCTGCAAGAGGTGCCAGCTCAC...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGGGCTTCTGCTTTCTCTaGTGGCTGCGCTTGGCAGCC +
Preference number: 5 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRGFCFL*WLRLAA
Trigger: GGCTGCCAAGCGCAGCCACAAGAGAAAGCAGAAGCC...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TTCCCAAGATGTCTTCTGTGCCTGAGCTGGGGGCCTCATGATACTTCTCACAGGACCAGTGTGGTAAGGTaGATAAAGTGGGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: FPRCLLCLSWGPHDTSHRTSVVR*IKWATD
Trigger: GTCAGTGGCCCACTTTATCAACCTTACCACACTGGT...CCTGTGAGAAGTATCATGAGGCCCCCAGCTCAGGCACAGAAGACATCTTGGGAA
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS TCA 90 bp TCATCCTCATTGGAAGTGTCGAAGCACACAGGATGCCCGTCCTTCTaGAATACCTTCAGAGGAAATGCCGACTCTTTCTCCCACTTGGCG +
Preference number: 5 (lower is better)
Translates to: SSSLEVSKHTGCPSF*NTFRGNADSFSHLA
Trigger: CGCCAAGTGGGAGAAAGAGTCGGCATTTCCTCTGAAGGTATTTCAGAAGGACGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 90 bp GCCACATGCTCTGAAGGCTCCTTGTCTTTGATAATGACCAGAGGCTaGTCAACCTTGGATGCTTTGGGTTTCCTCCCTCTTCGAGGCTTT +
Preference number: 5 (lower is better)
Translates to: ATCSEGSLSLIMTRG*STLDALGFLPLRGF
Trigger: AAAGCCTCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTCTGGTCATTATCAAAGACAAGGAGCCTTCAGAGCATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 90 bp ACCATGACCACAGGTCCCAGTTCAGGACACTCCGAGTCATGGTACTaGCTGCAGTCTTCACACCAGATAAACATGATCTCCTCACTACCA +
Preference number: 5 (lower is better)
Translates to: TMTTGPSSGHSESWY*LQSSHQINMISSLP
Trigger: TGGTAGTGAGGAGATCATGTTTATCTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGAGTGTCCTGAACTGGGACCTGTGGTCATGGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CCA 90 bp TCCTTGACCATGACCACAGGTCCCAGTTCAGGACACTCCGAGTCATaGTACTGGCTGCAGTCTTCACACCAGATAAACATGATCTCCTCA +
Preference number: 5 (lower is better)
Translates to: SLTMTTGPSSGHSES*YWLQSSHQINMISS
Trigger: TGAGGAGATCATGTTTATCTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGAGTGTCCTGAACTGGGACCTGTGGTCATGGTCAAGGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CCA 90 bp AACCTTGGATGCTTTGGGTTTCCTCCCTCTTCGAGGCTTTTTCTTTaGCTCTTTGGTGACCATGACACTCTGGATGCTCTTGCTCTCGGC +
Preference number: 5 (lower is better)
Translates to: NLGCFGFPPSSRLFL*LFGDHDTLDALALG
Trigger: GCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCAGCACAAAGGAGTCCTaGACCATGACCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPSTKES*TMTTGP
Trigger: GGGACCTGTGGTCATGGTCAAGGACTCCTTTGTGCT...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGACTCTTTCTCCCACTaGGCGACTCTCCTGGACTCA +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWDSFSH*ATLLDS
Trigger: TGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGTC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGCACGTCACTGCCATGTaGGTAGGCTGTCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWHVTAM*VGCQVL
Trigger: CAGAACCTGACAGCCTACCAACATGGCAGTGACGTG...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAGCTCCAGGAAGGTGTaGGAGCACACCTTACACACC +
Preference number: 5 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRSSRKV*EHTLHT
Trigger: GGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCT...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCCCTGCAGGGAGGCTTTaGGCTTGCTCCAGATGGCCC +
Preference number: 5 (lower is better)
Translates to: GERLVLSEFLLITAGSRCPAGRL*ACSRWP
Trigger: GGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGG...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TGCCGGTTGTGCAACATGGCGGAGCCACTGACAGTATCAAAGGTCACAGTCAGGTTTTTCTTTGGCTCTTaGGTGACCATGACACTCTGG +
Preference number: 5 (lower is better)
Translates to: CRLCNMAEPLTVSKVTVRFFFGS*VTMTLW
Trigger: CCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAA...CCTGACTGTGACCTTTGATACTGTCAGTGGCTCCGCCATGTTGCACAACCGGCA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCAGAGGCTGCTCAACCTaGGATGCTTTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSRGCST*DALGFL
Trigger: GAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTCT...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTTTGTATTCTGTCACGAGGACCTCTACTGCTCTCACCACCACATGGAAGCACCGAAGGCTCCTTGTCTTaGATAATGACCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: VCILSRGPLLLSPPHGSTEGSLS*IMTRGC
Trigger: GCAGCCTCTGGTCATTATCAAAGACAAGGAGCCTTC...GGTGCTTCCATGTGGTGGTGAGAGCAGTAGAGGTCCTCGTGACAGAATACAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGACTGAGCTGGCTTCATTaGTGGGGGCGGCCAGCTTCC +
Preference number: 5 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRLSWLH*WGRPAS
Trigger: GGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAG...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTTTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAA...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTCATTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: ASGFKREGSLCTQLCVASLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAA...TGAGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCAGGAAACACAGGCGACAGGAGAACACCTaGCCACACACTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: YPSLQDGCPYLNTSRKHRRQENT*PHTGHP
Trigger: TGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCG...CCTGTGTTTCCTGGAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGTGAGCTGGCACCTCTaGCAGCTGTACTTGTGTGGC +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFVSWHL*QLYLCG
Trigger: GCCACACAAGTACAGCTGCAAGAGGTGCCAGCTCAC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 90 bp CTTAGAGAGGTTGCTGTTGGTGGAGAAGAATCTGTCCTACAGTTGTaGAACTCCAGTGCACTCTCCATTCGGAATGTCTTCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: LREVAVGGEESVLQL*NSSALSIRNVFPQL
Trigger: CAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATTCTTCTCCACCAACAGCAACCTCTCTAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAGCTAGACCAAACTCTGTCCTCACCTTGCCTCTTCATGTCCCTGTGCTGGACTTTTTTCTTTGGCTCTTaGGTGACCATGACACTCTGG +
Preference number: 5 (lower is better)
Translates to: ELDQTLSSPCLFMSLCWTFFFGS*VTMTLW
Trigger: CCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAA...AGTCCAGCACAGGGACATGAAGAGGCAAGGTGAGGACAGAGTTTGGTCTAGCTC
50% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGGAAAACACATGGCAGAAGCTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTTTTTCTTTGGCTCTTaGGTGACCATGACACTCTGG +
Preference number: 5 (lower is better)
Translates to: GKTHGRSSCLPKPYHQQSFFFGS*VTMTLW
Trigger: CCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAA...GCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAGCTTCTGCCATGTGTTTTCCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTCCGTTCATCTGGTGTaGCACTCACAGGCTCATCTG +
Preference number: 5 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKSVHLV*HSQAHL
Trigger: CAGATGAGCCTGTGAGTGCAACACCAGATGAACGGA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAACGTGCCGGCTCAGGTaGCTGCTGTTCTGGAAGACC +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITATCRLR*LLFWKT
Trigger: GGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGT...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp AGCTCCAGAGGAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGGAAACACATCTCACATaGGAACGTCTTGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: SSRGASGFKREGSLCTQLETHLT*ERLVIC
Trigger: ACAGATGACAAGACGTTCCAATGTGAGATGTGTTTC...CAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTCCTCTGGAGCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GAGCATCGGGATTCAAGCGTGAGGGCTCACTTTGCACACAACTGTGTGTGGCCTGAAACACATCTCACATaGGAACGTCTTGTCATCTGT +
Preference number: 5 (lower is better)
Translates to: EHRDSSVRAHFAHNCVWPETHLT*ERLVIC
Trigger: ACAGATGACAAGACGTTCCAATGTGAGATGTGTTTC...AGGCCACACACAGTTGTGTGCAAAGTGAGCCCTCACGCTTGAATCCCGATGCTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGTCCACTCGGAAGAACTaGCGCCCACAGATCTCGCAG +
Preference number: 5 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWSTRKN*RPQISQ
Trigger: CTGCGAGATCTGTGGGCGCAAGTTCTTCCGAGTGGA...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCCTCTTGCAGCTGTACTaGTGTGGCTCAGAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFLLQLY*CGSESA
Trigger: CGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAG...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAGAACAAGTCCACTGCTaGCCTACTGTGTGGATGAGC +
Preference number: 5 (lower is better)
Translates to: ELRLQNDFSLLVNPGARREQVHC*PTVWMS
Trigger: GCTCATCCACACAGTAGGCAAGCAGTGGACTTGTTC...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCAGGACCTCGGGGTGCTaGCGTCGCATATGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: GERLVLSEFLLITAGSRCRTSGC*RRICLL
Trigger: GAGCAGACATATGCGACGCAAGCACCCCGAGGTCCT...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGATGGAGCAGTCACATaGGGGTCCCCTAGGGTCACC +
Preference number: 5 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRDGAVT*GSPRVT
Trigger: GGTGACCCTAGGGGACCCCAATGTGACTGCTCCATC...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCGGGGTCACGGTGATGTaGGTTAGACCAACTGAGCTT +
Preference number: 5 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPGVTVM*VRPTEL
Trigger: AAGCTCAGTTGGTCTAACCAACATCACCGTGACCCC...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GTCCTCAAGTGCCATCTCTTCCTTATGCTCCATCTGTGTAACAGAAGCTCCAGCACCAGTGTGGTAAGGTaGATAAAGTGGGCCACTGAC +
Preference number: 5 (lower is better)
Translates to: VLKCHLFLMLHLCNRSSSTSVVR*IKWATD
Trigger: GTCAGTGGCCCACTTTATCAACCTTACCACACTGGT...GCTGGAGCTTCTGTTACACAGATGGAGCATAAGGAAGAGATGGCACTTGAGGAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp TGTGACATGAAACACCCTCAGAGTTACAGAATGGTCTCCACAAACCTCAGAATCGACTCTTTCTCCCACTaGGCGACTCTCCTGGACTCA +
Preference number: 5 (lower is better)
Translates to: CDMKHPQSYRMVSTNLRIDSFSH*ATLLDS
Trigger: TGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGTC...GATTCTGAGGTTTGTGGAGACCATTCTGTAACTCTGAGGGTGTTTCATGTCACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAGACTCTTTCTCCCACTaGGCGACTCTCCTGGACTCA +
Preference number: 5 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVDSFSH*ATLLDS
Trigger: TGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGTC...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTACACGTCACTGCCATGTaGGTAGGCTGTCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVHVTAM*VGCQVL
Trigger: CAGAACCTGACAGCCTACCAACATGGCAGTGACGTG...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAAGCTCCAGGAAGGTGTaGGAGCACACCTTACACACC +
Preference number: 5 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVSSRKV*EHTLHT
Trigger: GGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCAGAGGCTGCTCAACCTaGGATGCTTTGGGTTTCCTC +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFRGCST*DALGFL
Trigger: GAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTCT...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTCGACAGGAGAACACCTaGCCACACACTGGGCATCCA +
Preference number: 5 (lower is better)
Translates to: VCFCVLPQKASHISVIVTRQENT*PHTGHP
Trigger: TGGATGCCCAGTGTGTGGCAAGGTGTTCTCCTGTCG...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAATTAGCGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRISAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGCTAAT...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTACCGTGGCCCTTCTCCTaGTGCACCTCCATGATGTGC +
Preference number: 5 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALPWPFS*CTSMMC
Trigger: GCACATCATGGAGGTGCACAAGGAGAAGGGCCACGG...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAATGTACTTCTGCACGTaGGGGTCAGGCAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMAMYFCT*GSGRFS
Trigger: GGAGAACCTGCCTGACCCCAACGTGCAGAAGTACAT...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTCCTGCTTGCCAAAGCCATACCACCAGCAAAGCTGATAGGTAGCTCTGTAATGTACTCCTTGATGCCTTaGTGCAGCTTCATATGGTGG +
Preference number: 5 (lower is better)
Translates to: LLLAKAIPPAKLIGSSVMYSLMP*CSFIWW
Trigger: CCACCATATGAAGCTGCACAAAGGCATCAAGGAGTA...CATTACAGAGCTACCTATCAGCTTTGCTGGTGGTATGGCTTTGGCAAGCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGAAACCTGCGTTTGTTGCACTCATACTCCTaGATGCCTTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: QNDFSLLVNPGARRNLRLLHSYS*MPLCSF
Trigger: GAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAA...CAAACGCAGGTTTCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCGGTCACCACCACCTGTaGGATACTCTGTACAGCAGA +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFGHHHL*DTLYSR
Trigger: TCTGCTGTACAGAGTATCCAACAGGTGGTGGTGACC...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGGAATCTGTCCTACAGTaGTGGAACTCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWESVLQ*WNSSAL
Trigger: GAGTGCACTGGAGTTCCACAACTGTAGGACAGATTC...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CCA 90 bp AAACACATCTCACATTGGAACGTCTTGTCATCTGTCCTACAGTTGTaGAACTCCAGTGCACTCTCCATTCGGAATGTCTTCCCACAGCTG +
Preference number: 5 (lower is better)
Translates to: KHISHWNVLSSVLQL*NSSALSIRNVFPQL
Trigger: CAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATGACAAGACGTTCCAATGTGAGATGTGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTAGCACAAAGGAGTCCTaGACCATGACCACAGGTCCC +
Preference number: 5 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFSTKES*TMTTGP
Trigger: GGGACCTGTGGTCATGGTCAAGGACTCCTTTGTGCT...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGATTGCAGTCATCCTCATaGGAAGTGTCGAAGCACACA +
Preference number: 5 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRLQSSS*EVSKHT
Trigger: TGTGTGCTTCGACACTTCCAATGAGGATGACTGCAA...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGTTGCAGTCATCCTCATaGGAAGTGTCGAAGCACACA +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWLQSSS*EVSKHT
Trigger: TGTGTGCTTCGACACTTCCAATGAGGATGACTGCAA...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGACTCTTGCAGCTGTACTaGTGTGGCTCAGAGTCTGCG +
Preference number: 5 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRLLQLY*CGSESA
Trigger: CGCAGACTCTGAGCCACACAAGTACAGCTGCAAGAG...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAATGTACTTCTGCACGTaGGGGTCAGGCAGGTTCTCC +
Preference number: 5 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRMYFCT*GSGRFS
Trigger: GGAGAACCTGCCTGACCCCAACGTGCAGAAGTACAT...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGACCTGTGTGGATGAGTTaGTGGCGCTCCAAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: TFPTDQQWFMYVGYLECRPVWMS*WRSKFP
Trigger: TGGGAACTTGGAGCGCCACAAACTCATCCACACAGG...TCTACACTCCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGTTGCACTCATACTCCTaGATGCCTTTGTGCAGCTTC +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWLHSYS*MPLCSF
Trigger: GAAGCTGCACAAAGGCATCAAGGAGTATGAGTGCAA...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGATGGCAACATCATTTTGCCGGTaGTGCAACATGGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: ILHSGMWLSCTIIHVWMATSFCR*CNMAEP
Trigger: TGGCTCCGCCATGTTGCACAACCGGCAAAATGATGT...TGCCATCCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTCCCCATCCTTCATTCAGGGATGTGGCTAAGCTGCACCATAATACATGTTTGGACTAGCATCATCCAGTaGCAGTCATCCTCATTGGAA +
Preference number: 5 (lower is better)
Translates to: LPILHSGMWLSCTIIHVWTSIIQ*QSSSLE
Trigger: TTCCAATGAGGATGACTGCAACTGGATGATGCTAGT...CCAAACATGTATTATGGTGCAGCTTAGCCACATCCCTGAATGAAGGATGGGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CAACCTGAACATTTCCTACGGATCAACAATGGTTTATGTATGTGGGGTACCTGGGATGATGTGGGAACTTaGGCACTGAGCTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: QPEHFLRINNGLCMWGTWDDVGT*ALSWLH
Trigger: ATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATC...CCAGGTACCCCACATACATAAACCATTGTTGATCCGTAGGAAATGTTCAGGTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CACAGAAAGGAAACATGGTTCACTCCCCATCCTTCATTCAGGGATGTGGCTAAGTTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAAT +
Preference number: 5 (lower is better)
Translates to: HRKETWFTPHPSFRDVAKLCLER*LLVEKN
Trigger: ATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAA...CTTAGCCACATCCCTGAATGAAGGATGGGGAGTGAACCATGTTTCCTTTCTGTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GAACTGAGACTTCAGAATGACTTCTCCCTGCTTGTGAATCCAGGAGCAAGGAGATCACAGGCAAACTTCTaGTCCCCATGTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: ELRLQNDFSLLVNPGARRSQANF*SPCFFL
Trigger: CAAGAAGAAACATGGGGACAAGAAGTTTGCCTGTGA...TCTCCTTGCTCCTGGATTCACAAGCAGGGAGAAGTCATTCTGAAGTCTCAGTTC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TTGCAAACTCTTCCTGTTTGGTATCCAGCAAACACCTCAAGACCTCAGAACCCCTCACAGGCAAACTTCTaGTCCCCATGTTTCTTCTTG +
Preference number: 5 (lower is better)
Translates to: LQTLPVWYPANTSRPQNPSQANF*SPCFFL
Trigger: CAAGAAGAAACATGGGGACAAGAAGTTTGCCTGTGA...GGGGTTCTGAGGTCTTGAGGTGTTTGCTGGATACCAAACAGGAAGAGTTTGCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAATTAGCGCGATGTCCTaGAAGTGGACATGGATGTGG +
Preference number: 5 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVISAMS*KWTWMW
Trigger: CCACATCCATGTCCACTTCAAGGACATCGCGCTAAT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCTACTCCTTGATGCCTTaGTGCAGCTTCATATGGTGG +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFYSLMP*CSFIWW
Trigger: CCACCATATGAAGCTGCACAAAGGCATCAAGGAGTA...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGGGTCACGGTGATGTaGGTTAGACCAACTGAGCTT +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITAGVTVM*VRPTEL
Trigger: AAGCTCAGTTGGTCTAACCAACATCACCGTGACCCC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTTCAACCTTGGATGCTTaGGGTTTCCTCCCTCTTCGA +
Preference number: 5 (lower is better)
Translates to: VCFCVLPQKASHISVIVTSTLDA*GFLPLR
Trigger: TCGAAGAGGGAGGAAACCCAAAGCATCCAAGGTTGA...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAGAAGGCTCCTTGTCTTaGATAATGACCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: WGERLVLSEFLLITAGSREGSLS*IMTRGC
Trigger: GCAGCCTCTGGTCATTATCAAAGACAAGGAGCCTTC...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGATGCGAAGGCTCCTTGTCTTaGATAATGACCAGAGGCTGC +
Preference number: 5 (lower is better)
Translates to: GERLVLSEFLLITAGSRCEGSLS*IMTRGC
Trigger: GCAGCCTCTGGTCATTATCAAAGACAAGGAGCCTTC...GCATCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp CACTGCTGGTTAGTATCCATCTCTGCAGGATGGCTGCCCATATTTGAATACTTCTGCTCTGAAGGCTCCTaGTCTTTGATAATGACCAGA +
Preference number: 5 (lower is better)
Translates to: HCWLVSISAGWLPIFEYFCSEGS*SLIMTR
Trigger: TCTGGTCATTATCAAAGACAAGGAGCCTTCAGAGCA...GAAGTATTCAAATATGGGCAGCCATCCTGCAGAGATGGATACTAACCAGCAGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGATGATGTGGGAACTTaGGCACTGAGCTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITADDVGT*ALSWLH
Trigger: ATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATC...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp TGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCAGGAAGTAGAGATGATGTGGGAACTTaGGCACTGAGCTGGCTTCAT +
Preference number: 5 (lower is better)
Translates to: WGERLVLSEFLLITAGSRDDVGT*ALSWLH
Trigger: ATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATC...TCTACTTCCTGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATCATCTGTCCTACAGTaGTGGAACTCCAGTGCACTC +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITASSVLQ*WNSSAL
Trigger: GAGTGCACTGGAGTTCCACAACTGTAGGACAGATGA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAAGGACCTCGGGGTGCTaGCGTCGCATATGTCTGCTC +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKRTSGC*RRICLL
Trigger: GAGCAGACATATGCGACGCAAGCACCCCGAGGTCCT...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp CTGTGCTGCAACTATGAGATCCATCTTGTTATGACATGTGACCCTATAGCATTAACATCATTTTGCCGGTaGTGCAACATGGCGGAGCCA +
Preference number: 5 (lower is better)
Translates to: LCCNYEIHLVMTCDPIALTSFCR*CNMAEP
Trigger: TGGCTCCGCCATGTTGCACAACCGGCAAAATGATGT...TAATGCTATAGGGTCACATGTCATAACAAGATGGATCTCATAGTTGCAGCACAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATTGCAGTCATCCTCATaGGAAGTGTCGAAGCACACA +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITALQSSS*EVSKHT
Trigger: TGTGTGCTTCGACACTTCCAATGAGGATGACTGCAA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GGAAGTAGATGCCTCTGTATATTTAAGCAAACAGTGGCAGCAGGAGAGACTGTAACTAGCATCATCCAGTaGCAGTCATCCTCATTGGAA +
Preference number: 5 (lower is better)
Translates to: GSRCLCIFKQTVAAGETVTSIIQ*QSSSLE
Trigger: TTCCAATGAGGATGACTGCAACTGGATGATGCTAGT...TACAGTCTCTCCTGCTGCCACTGTTTGCTTAAATATACAGAGGCATCTACTTCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAACACGTCACTGCCATGTaGGTAGGCTGTCAGGTTCTG +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKHVTAM*VGCQVL
Trigger: CAGAACCTGACAGCCTACCAACATGGCAGTGACGTG...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ACAGACACTTGGGGAGAAAGGCTGGTTTTATCTGAATTCCTGCTTATAACAGCATGCTCTGAAGGCTCCTaGTCTTTGATAATGACCAGA +
Preference number: 5 (lower is better)
Translates to: TDTWGERLVLSEFLLITACSEGS*SLIMTR
Trigger: TCTGGTCATTATCAAAGACAAGGAGCCTTCAGAGCA...TGCTGTTATAAGCAGGAATTCAGATAAAACCAGCCTTTCTCCCCAAGTGTCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp ATCAACAATGGTTTATGTATGTGGGGTACCTGGAGTGTAGAGGTGCCTTTGTTTTGCTCTGAAGGCTCCTaGTCTTTGATAATGACCAGA +
Preference number: 5 (lower is better)
Translates to: INNGLCMWGTWSVEVPLFCSEGS*SLIMTR
Trigger: TCTGGTCATTATCAAAGACAAGGAGCCTTCAGAGCA...AAACAAAGGCACCTCTACACTCCAGGTACCCCACATACATAAACCATTGTTGAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp GTTTGCTTCTGTGTGTTGCCACAGAAGGCTAGCCATATTTCAGTTATTGTCACTTCACATTGGAACGTCTaGTCATCTGTCCTACAGTTG +
Preference number: 5 (lower is better)
Translates to: VCFCVLPQKASHISVIVTSHWNV*SSVLQL
Trigger: CAACTGTAGGACAGATGACAAGACGTTCCAATGTGA...AGTGACAATAACTGAAATATGGCTAGCCTTCTGTGGCAACACACAGAAGCAAAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAACCTGTGTGGATGAGTTaGTGGCGCTCCAAGTTCCCA +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKPVWMS*WRSKFP
Trigger: TGGGAACTTGGAGCGCCACAAACTCATCCACACAGG...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAATCCGTTCATCTGGTGTaGCACTCACAGGCTCATCTG +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKSVHLV*HSQAHL
Trigger: CAGATGAGCCTGTGAGTGCAACACCAGATGAACGGA...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAGAGGAGATCCCAATTTaGCCAATGAACTCCTCCCGC +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKEEIPI*PMNSSR
Trigger: GCGGGAGGAGTTCATTGGCAAAATTGGGATCTCCTC...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS-3UTR CAA 90 bp AAAGAAATCAATATTGACCACGAGAGGGCCATAATACATAACGTGGTTATGAAAGATCTGGACATCATTTaGCCGGTTGTGCAACATGGC +
Preference number: 5 (lower is better)
Translates to: KEINIDHERAIIHNVVMKDLDII*PVVQHG
Trigger: GCCATGTTGCACAACCGGCAAAATGATGTCCAGATC...TTTCATAACCACGTTATGTATTATGGCCCTCTCGTGGTCAATATTGATTTCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp TTGTCCCCGTGCGCGCACTCACCGTGCGAGCGCACGTaGCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: LSPCAHSPCERT*RLRLLLFWKTL
Trigger: CAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp TGTCCCCGTGCGAGCGCACGTGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGCTGCAGGTGCCACACT +
Preference number: 6 (lower is better)
Translates to: CPRASARAGSGC*CSGRPCCRCHT
Trigger: AGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGGGACA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS GCA 72 bp ACTCACCGTGCGAGCGCACGTGCCGGCTCAGGTTGCTaGTGTTCTGGAAGACCTTGCTGCAGGTGCCACACT +
Preference number: 6 (lower is better)
Translates to: THRASARAGSGC*CSGRPCCRCHT
Trigger: AGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGTGAGT
62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp CATTTAAACAGCTTGTCCCCGTGCGCGCACTCACCGTaGGAGCGCACGTGCCGGCTCAGGTTGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: HLNSLSPCAHSP*ERTCRLRLLLF
Trigger: GAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAAGCTGTTTAAATG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp ACACCCATTGGCCACGCTCAGGTTCCACAGAGACACTaGGCTCAGGGGTGCCTGCAGCCTGAACACTGGAGC +
Preference number: 6 (lower is better)
Translates to: TPIGHAQVPQRH*AQGCLQPEHWS
Trigger: GCTCCAGTGTTCAGGCTGCAGGCACCCCTGAGCCCAGTGTCTCTGTGGAACCTGAGCGTGGCCAATGGGTGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp CTTGCTCTCGGCTGCTGTGGGAGGCTCCATCCTGGGTaGATCAGGCTCCTTCTCAGAAGCTGCCTCATGCTG +
Preference number: 6 (lower is better)
Translates to: LALGCCGRLHPG*IRLLLRSCLML
Trigger: CAGCATGAGGCAGCTTCTGAGAAGGAGCCTGATGCACCCAGGATGGAGCCTCCCACAGCAGCCGAGAGCAAG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 90 bp GAGCTGAAGCTCCAGGAAGGTGTTGGAGCACACCTTACACACCCATaGGCCACGCTCAGGTTCCACAGAGACACTGGGCTCAGGGGTGCC +
Preference number: 6 (lower is better)
Translates to: ELKLQEGVGAHLTHP*ATLRFHRDTGLRGA
Trigger: GGCACCCCTGAGCCCAGTGTCTCTGTGGAACCTGAGCGTGGCCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCTTCAGCTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp CTCCTTCTCAGAAGCTGCCTCATGCTGCTGGCCACCTaGAGGGAGGCTTTTGGCTTGCTCCAGATGGCCCAA +
Preference number: 6 (lower is better)
Translates to: LLLRSCLMLLAT*REAFGLLQMAQ
Trigger: TTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAGCTTCTGAGAAGGAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TTCGAACATTCCTCACATTTAAACAGCTTGTCCCCGTaGGCGCACTCACCGTGCGAGCGCACGTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: FEHSSHLNSLSP*AHSPCERTCRL
Trigger: GAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAAGCTGTTTAAATGTGAGGAATGTTCGAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp CTGCCTCATGCTGCTGGCCACCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCAAGAGATGCTCGTTCA +
Preference number: 6 (lower is better)
Translates to: LPHAAGHLQGGF*LAPDGPRDARS
Trigger: TGAACGAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp CTGCCTCATGCTGCTGGCCACCTGCAGGGAGGCTTTTaGCTTGCTCCAGATGGCCCAAGAGATGCTCCTGAA +
Preference number: 6 (lower is better)
Translates to: LPHAAGHLQGGF*LAPDGPRDAPE
Trigger: TTCAGGAGCATCTCTTGGGCCATCTGGAGCAAGCCAAAAGCCTCCCTGCAGGTGGCCAGCAGCATGAGGCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CAA 90 bp TTAGAGGGGAGGGAGGACCTTGCCCTGCTCAGCACAAAGGAGTCCTaGACCATGACCACAGGTCCCAGTTCAGGACACTCCGAGTCATGG +
Preference number: 6 (lower is better)
Translates to: LEGREDLALLSTKES*TMTTGPSSGHSESW
Trigger: CCATGACTCGGAGTGTCCTGAACTGGGACCTGTGGTCATGGTCAAGGACTCCTTTGTGCTGAGCAGGGCAAGGTCCTCCCTCCCCTCTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CAA 90 bp TCCTTACGGCTGAACAGTTTCGAACATTCCTCACATTTAAACAGCTaGTCCCCGTGCGCGCACTCACCGTGCGAGCGCACGTGCCGGCTC +
Preference number: 6 (lower is better)
Translates to: SLRLNSFEHSSHLNS*SPCAHSPCERTCRL
Trigger: GAGCCGGCACGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAAGCTGTTTAAATGTGAGGAATGTTCGAAACTGTTCAGCCGTAAGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS GCA 72 bp CCAGTGCACTCTCCATTCGGAATGTCTTCCCACAGCTaGCACAGCGGTAGCGGTACTCACCGTCCACCTCAT +
Preference number: 6 (lower is better)
Translates to: PVHSPFGMSSHS*HSGSGTHRPPH
Trigger: ATGAGGTGGACGGTGAGTACCGCTACCGCTGTGGCAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 72 bp AGGGAGGACCTTGCCCTGCTCAGCACAAAGGAGTCCTaGACCATGACCACAGGTCCCAGTTCAGGACACTCC +
Preference number: 6 (lower is better)
Translates to: REDLALLSTKES*TMTTGPSSGHS
Trigger: GGAGTGTCCTGAACTGGGACCTGTGGTCATGGTCAAGGACTCCTTTGTGCTGAGCAGGGCAAGGTCCTCCCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CAA 72 bp CTCCAGGAAGGTGTTGGAGCACACCTTACACACCCATaGGCCACGCTCAGGTTCCACAGAGACACTGGGCTC +
Preference number: 6 (lower is better)
Translates to: LQEGVGAHLTHP*ATLRFHRDTGL
Trigger: GAGCCCAGTGTCTCTGTGGAACCTGAGCGTGGCCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CAA 90 bp CACTTGGCGACTCTCCTGGACTCAAACGGACCAAATTGTGTGCGCTaGACTAGCTGGGTCACTGCAAACACGCCTTCAGCCCCGTCATCC +
Preference number: 6 (lower is better)
Translates to: HLATLLDSNGPNCVR*TSWVTANTPSAPSS
Trigger: GGATGACGGGGCTGAAGGCGTGTTTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTGGTCCGTTTGAGTCCAGGAGAGTCGCCAAGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 90 bp TTCTGGTGCCCAGGCTCCAGTGCTGGTCGCACTAGCATCATCCAGTaGCAGTCATCCTCATTGGAAGTGTCGAAGCACACAGGATGCCCG +
Preference number: 6 (lower is better)
Translates to: FWCPGSSAGRTSIIQ*QSSSLEVSKHTGCP
Trigger: CGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACCAGCACTGGAGCCTGGGCACCAGAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 90 bp GGCTTTTTCTTTGGCTCTTTGGTGACCATGACACTCTGGATGCTCTaGCTCTCGGCTGCTGTGGGAGGCTCCATCCTGGGTGCATCAGGC +
Preference number: 6 (lower is better)
Translates to: GFFFGSLVTMTLWML*LSAAVGGSILGASG
Trigger: GCCTGATGCACCCAGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAAGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS TCA 72 bp AATGGTGCTGCTTGGATGATGTGGGAACTTTGGCACTaGGCTGGCTTCATTTGTGGGGGCGGCCAGCTTCCC +
Preference number: 6 (lower is better)
Translates to: NGAAWMMWELWH*AGFICGGGQLP
Trigger: GGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATCCAAGCAGCACCATT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TCTGGAAGACCTTGCTGCAGGTGCCACACTGATGGATaGGTTTATGCTCACCCAGCTGACGGACGAGCTTCC +
Preference number: 6 (lower is better)
Translates to: SGRPCCRCHTDG*VYAHPADGRAS
Trigger: GGAAGCTCGTCCGTCAGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp GCCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTGCTaGAGGTGCCACACTGATGGATGCGTTTATGCTCAC +
Preference number: 6 (lower is better)
Translates to: AGSGCCCSGRPC*RCHTDGCVYAH
Trigger: GTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp CGTGCCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTaGTGCAGGTGCCACACTGATGGATGCGTTTATGCT +
Preference number: 6 (lower is better)
Translates to: RAGSGCCCSGRP*CRCHTDGCVYA
Trigger: AGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TCACATTTAAACAGCTTGTCCCCGTGCGAGCGCACGTaGCGGCTCAGGTTGCTGCTGTTCTGGAAGACCTTG +
Preference number: 6 (lower is better)
Translates to: SHLNSLSPCERT*RLRLLLFWKTL
Trigger: CAAGGTCTTCCAGAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGGGACAAGCTGTTTAAATGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CCA 72 bp TCCAGGAAGGTGTTGGAGCACACCTTACACACCCATTaGCCACGCTCAGGTTCCACAGAGACACTGGGCTCA +
Preference number: 6 (lower is better)
Translates to: SRKVLEHTLHTH*PRSGSTETLGS
Trigger: TGAGCCCAGTGTCTCTGTGGAACCTGAGCGTGGCCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp GATGCTCGTTCAGGAGCTGAAGCTCCAGGAAGGTGTTaGAGCACACCTTACACACCCATTGGCCACGCTCAG +
Preference number: 6 (lower is better)
Translates to: DARSGAEAPGRC*STPYTPIGHAQ
Trigger: CTGAGCGTGGCCAATGGGTGTGTAAGGTGTGCTCCAACACCTTCCTGGAGCTTCAGCTCCTGAACGAGCATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp TGCTGCTTGGATGATGTGGGAACTTTGGCACTGAGCTaGCTTCATTTGTGGGGGCGGCCAGCTTCCCCAAGA +
Preference number: 6 (lower is better)
Translates to: CCLDDVGTLALS*LHLWGRPASPR
Trigger: TCTTGGGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATCCAAGCAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 72 bp AAGGTTCCTTCTTGTAACGAACCAGGCTTTCCCCGCTaGCCTCCAAGTCTTCTCTCTTCACCCGCCGCACAC +
Preference number: 6 (lower is better)
Translates to: KVPSCNEPGFPR*PPSLLSSPAAH
Trigger: GTGTGCGGCGGGTGAAGAGAGAAGACTTGGAGGCCAGCGGGGAAAGCCTGGTTCGTTACAAGAAGGAACCTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CAA 72 bp TTTGGCTCTTTGGTGACCATGACACTCTGGATGCTCTaGCTCTCGGCTGCTGTGGGAGGCTCCATCCTGGGT +
Preference number: 6 (lower is better)
Translates to: FGSLVTMTLWML*LSAAVGGSILG
Trigger: ACCCAGGATGGAGCCTCCCACAGCAGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS TCA 72 bp AAACATGATCTCCTCACTACCATCTTCAGCCATTGCTaGTACCTCAGGAGCACGCAGGCTCCACCTGGCCCC +
Preference number: 6 (lower is better)
Translates to: KHDLLTTIFSHC*YLRSTQAPPGP
Trigger: GGGGCCAGGTGGAGCCTGCGTGCTCCTGAGGTATCAGCAATGGCTGAAGATGGTAGTGAGGAGATCATGTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000135505.3
CDS TCA 72 bp CTCTCCTGGACTCAAACGGACCAAATTGTGTGCGCTTaGCTAGCTGGGTCACTGCAAACACGCCTTCAGCCC +
Preference number: 6 (lower is better)
Translates to: LSWTQTDQIVCA*LAGSLQTRLQP
Trigger: GGGCTGAAGGCGTGTTTGCAGTGACCCAGCTAGTCAAGCGCACACAATTTGGTCCGTTTGAGTCCAGGAGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS TCA 72 bp TTGTGGGGGCGGCCAGCTTCCCCAAGACTAACTCCATaGTCCGTTCATCTGGTGTTGCACTCACAGGCTCAT +
Preference number: 6 (lower is better)
Translates to: LWGRPASPRLTP*SVHLVLHSQAH
Trigger: ATGAGCCTGTGAGTGCAACACCAGATGAACGGATCATGGAGTTAGTCTTGGGGAAGCTGGCCGCCCCCACAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TTCGAACATTCCTCACATTTAAACAGCTTGTCCCCGTaGGAGCGCACGTGCCGGCTCAGGTTGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: FEHSSHLNSLSP*ERTCRLRLLLF
Trigger: GAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGGGACAAGCTGTTTAAATGTGAGGAATGTTCGAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CCA 72 bp CTTGCTCCAGATGGCCCAAGAGATGCTCCTGAACACTaGAGCAGGCCTGCTTTAGCATGGGCTTGTCCATCT +
Preference number: 6 (lower is better)
Translates to: LAPDGPRDAPEH*SRPALAWACPS
Trigger: AGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTCAGGAGCATCTCTTGGGCCATCTGGAGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CAA 72 bp GATGATGTGGGAACTTTGGCACTGAGCTGGCTTCATTaGTGGGGGCGGCCAGCTTCCCCAAGACTAACTCCA +
Preference number: 6 (lower is better)
Translates to: DDVGTLALSWLH*WGRPASPRLTP
Trigger: TGGAGTTAGTCTTGGGGAAGCTGGCCGCCCCCACAAATGAAGCCAGCTCAGTGCCAAAGTTCCCACATCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 72 bp CTGAACAGTTTCGAACATTCCTCACATTTAAACAGCTaGTCCCCGTGCGCGCACTCACCGTGCGAGCGCACG +
Preference number: 6 (lower is better)
Translates to: LNSFEHSSHLNS*SPCAHSPCERT
Trigger: CGTGCGCTCGCACGGTGAGTGCGCGCACGGGGACAAGCTGTTTAAATGTGAGGAATGTTCGAAACTGTTCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CAA 90 bp TCCTTACGGCTGAACAGTTTCGAACATTCCTCACATTTAAACAGCTaGTCCCCGTGCGAGCGCACGTGCCGGCTCAGGTTGCTGCTGTTC +
Preference number: 6 (lower is better)
Translates to: SLRLNSFEHSSHLNS*SPCERTCRLRLLLF
Trigger: GAACAGCAGCAACCTGAGCCGGCACGTGCGCTCGCACGGGGACAAGCTGTTTAAATGTGAGGAATGTTCGAAACTGTTCAGCCGTAAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS GCA 72 bp CAGGCTCCAGTGCTGGTCGCACTAGCATCATCCAGTTaGAGTCATCCTCATTGGAAGTGTCGAAGCACACAG +
Preference number: 6 (lower is better)
Translates to: QAPVLVALASSS*SHPHWKCRSTQ
Trigger: CTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACCAGCACTGGAGCCTG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TCAGGTTGCTGCTGTTCTGGAAGACCTTGCTGCAGGTaGCACACTGATGGATGCGTTTATGCTCACCCAGCT +
Preference number: 6 (lower is better)
Translates to: SGCCCSGRPCCR*HTDGCVYAHPA
Trigger: AGCTGGGTGAGCATAAACGCATCCATCAGTGTGGCACCTGCAGCAAGGTCTTCCAGAACAGCAGCAACCTGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 72 bp GGTCGCACTAGCATCATCCAGTTGCAGTCATCCTCATaGGAAGTGTCGAAGCACACAGGATGCCCGTCCTTC +
Preference number: 6 (lower is better)
Translates to: GRTSIIQLQSSS*EVSKHTGCPSF
Trigger: GAAGGACGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 72 bp CCAGGCTCCAGTGCTGGTCGCACTAGCATCATCCAGTaGCAGTCATCCTCATTGGAAGTGTCGAAGCACACA +
Preference number: 6 (lower is better)
Translates to: PGSSAGRTSIIQ*QSSSLEVSKHT
Trigger: TGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGACCAGCACTGGAGCCTGG
54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp CGTCTTGTCATCTGTCCTACAGTTGTGGAACTCCAGTaGACTCTCCATTCGGAATGTCTTCCCACAGCTGCC +
Preference number: 6 (lower is better)
Translates to: RLVICPTVVELQ*TLHSECLPTAA
Trigger: GGCAGCTGTGGGAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATGACAAGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp GTCGCACTAGCATCATCCAGTTGCAGTCATCCTCATTaGAAGTGTCGAAGCACACAGGATGCCCGTCCTTCT +
Preference number: 6 (lower is better)
Translates to: VALASSSCSHPH*KCRSTQDARPS
Trigger: AGAAGGACGGGCATCCTGTGTGCTTCGACACTTCCAATGAGGATGACTGCAACTGGATGATGCTAGTGCGAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 72 bp CTGCAGCCTGAACACTGGAGCAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGGCATAAAAGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: LQPEHWSRPALA*ACPSSWHKRQH
Trigger: ATGCTGCCTTTTATGCCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTCAGGCTGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp GATCCGTTCATCTGGTGTTGCACTCACAGGCTCATCTaGGGGGATCTCAGTTATGATCTCTGCCACATGCTC +
Preference number: 6 (lower is better)
Translates to: DPFIWCCTHRLI*GDLSYDLCHML
Trigger: GAGCATGTGGCAGAGATCATAACTGAGATCCCCCCAGATGAGCCTGTGAGTGCAACACCAGATGAACGGATC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 90 bp GATGCTTTGGGTTTCCTCCCTCTTCGAGGCTTTTTCTTTGGCTCTTaGGTGACCATGACACTCTGGATGCTCTTGCTCTCGGCTGCTGTG +
Preference number: 6 (lower is better)
Translates to: DALGFLPLRGFFFGS*VTMTLWMLLLSAAV
Trigger: CACAGCAGCCGAGAGCAAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGAAGAGGGAGGAAACCCAAAGCATC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS TCA 72 bp CCACACACGCAGTTCAGTGCCTGCAGGAATGTCCTTTaGGGTGGTGAAATACACGTCACTGCCATGTTGGTA +
Preference number: 6 (lower is better)
Translates to: PHTQFSACRNVL*GGEIHVTAMLV
Trigger: TACCAACATGGCAGTGACGTGTATTTCACCACCTCAAAGGACATTCCTGCAGGCACTGAACTGCGTGTGTGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 72 bp ACAGGTCCCAGTTCAGGACACTCCGAGTCATGGTACTaGCTGCAGTCTTCACACCAGATAAACATGATCTCC +
Preference number: 6 (lower is better)
Translates to: TGPSSGHSESWY*LQSSHQINMIS
Trigger: GGAGATCATGTTTATCTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGAGTGTCCTGAACTGGGACCTGT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CCA 72 bp ATGACCACAGGTCCCAGTTCAGGACACTCCGAGTCATaGTACTGGCTGCAGTCTTCACACCAGATAAACATG +
Preference number: 6 (lower is better)
Translates to: MTTGPSSGHSES*YWLQSSHQINM
Trigger: CATGTTTATCTGGTGTGAAGACTGCAGCCAGTACCATGACTCGGAGTGTCCTGAACTGGGACCTGTGGTCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000135505.3
ENSMUST00000142295.8
CDS CCA 72 bp GATGCTCCTGAACACTGGAGCAGGCCTGCTTTAGCATaGGCTTGTCCATCTTCTTGGCATAAAAGGCAGCAT +
Preference number: 6 (lower is better)
Translates to: DAPEHWSRPALA*ACPSSWHKRQH
Trigger: ATGCTGCCTTTTATGCCAAGAAGATGGACAAGCCCATGCTAAAGCAGGCCTGCTCCAGTGTTCAGGAGCATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CAA 72 bp GGTTTCCTCCCTCTTCGAGGCTTTTTCTTTGGCTCTTaGGTGACCATGACACTCTGGATGCTCTTGCTCTCG +
Preference number: 6 (lower is better)
Translates to: GFLPLRGFFFGS*VTMTLWMLLLS
Trigger: CGAGAGCAAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGAAGAGGGAGGAAACC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS TCA 72 bp TTGGAAGTGTCGAAGCACACAGGATGCCCGTCCTTCTaGAATACCTTCAGAGGAAATGCCGACTCTTTCTCC +
Preference number: 6 (lower is better)
Translates to: LEVSKHTGCPSF*NTFRGNADSFS
Trigger: GGAGAAAGAGTCGGCATTTCCTCTGAAGGTATTTCAGAAGGACGGGCATCCTGTGTGCTTCGACACTTCCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS GCA 72 bp TCTGAAGGCTCCTTGTCTTTGATAATGACCAGAGGCTaGTCAACCTTGGATGCTTTGGGTTTCCTCCCTCTT +
Preference number: 6 (lower is better)
Translates to: SEGSLSLIMTRG*STLDALGFLPL
Trigger: AAGAGGGAGGAAACCCAAAGCATCCAAGGTTGAGCAGCCTCTGGTCATTATCAAAGACAAGGAGCCTTCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 72 bp TGCTTTGGGTTTCCTCCCTCTTCGAGGCTTTTTCTTTaGCTCTTTGGTGACCATGACACTCTGGATGCTCTT +
Preference number: 6 (lower is better)
Translates to: CFGFPPSSRLFL*LFGDHDTLDAL
Trigger: AAGAGCATCCAGAGTGTCATGGTCACCAAAGAGCCAAAGAAAAAGCCTCGAAGAGGGAGGAAACCCAAAGCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CCA 72 bp GTTGCTGTTGGTGGAGAAGAATCTGTCCTACAGTTGTaGAACTCCAGTGCACTCTCCATTCGGAATGTCTTC +
Preference number: 6 (lower is better)
Translates to: VAVGGEESVLQL*NSSALSIRNVF
Trigger: GAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATTCTTCTCCACCAACAGCAAC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CAA 72 bp AATACCTTCAGAGGAAATGCCGACTCTTTCTCCCACTaGGCGACTCTCCTGGACTCAAACGGACCAAATTGT +
Preference number: 6 (lower is better)
Translates to: NTFRGNADSFSH*ATLLDSNGPNC
Trigger: ACAATTTGGTCCGTTTGAGTCCAGGAGAGTCGCCAAGTGGGAGAAAGAGTCGGCATTTCCTCTGAAGGTATT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000095849.10
ENSMUST00000119200.8
ENSMUST00000121584.8
ENSMUST00000142295.8
CDS CAA 90 bp CAGGCAAACTTCTTGTCCCCATGTTTCTTCTTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAATCTGTCCTACAGTTGTGGAACTCCA +
Preference number: 6 (lower is better)
Translates to: QANFLSPCFFLCLER*LLVEKNLSYSCGTP
Trigger: TGGAGTTCCACAACTGTAGGACAGATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAAGAAGAAACATGGGGACAAGAAGTTTGCCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CCA 72 bp TCACATTGGAACGTCTTGTCATCTGTCCTACAGTTGTaGAACTCCAGTGCACTCTCCATTCGGAATGTCTTC +
Preference number: 6 (lower is better)
Translates to: SHWNVLSSVLQL*NSSALSIRNVF
Trigger: GAAGACATTCCGAATGGAGAGTGCACTGGAGTTCCACAACTGTAGGACAGATGACAAGACGTTCCAATGTGA
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CCA 72 bp CTGTTGGTGGAGAAGAATCTGAAACACATCTCACATTaGAACGTCTTGTCATCTGTCCTACAGTTGTGGAAC +
Preference number: 6 (lower is better)
Translates to: LLVEKNLKHISH*NVLSSVLQLWN
Trigger: GTTCCACAACTGTAGGACAGATGACAAGACGTTCCAATGTGAGATGTGTTTCAGATTCTTCTCCACCAACAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8
CDS CAA 72 bp TTCTTGTCCCCATGTTTCTTCTTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAATCTGTCCTACAGTTGT +
Preference number: 6 (lower is better)
Translates to: FLSPCFFLCLER*LLVEKNLSYSC
Trigger: ACAACTGTAGGACAGATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAAGAAGAAACATGGGGACAAGAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000142295.8
CDS CAA 72 bp TTCTTGTCCCCATGTTTCTTCTTGTGCTTAGAGAGGTaGCTGTTGGTGGAGAAGAATCTGAAACACATCTCA +
Preference number: 6 (lower is better)
Translates to: FLSPCFFLCLER*LLVEKNLKHIS
Trigger: TGAGATGTGTTTCAGATTCTTCTCCACCAACAGCAACCTCTCTAAGCACAAGAAGAAACATGGGGACAAGAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000095849.10
ENSMUST00000121584.8